TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|115583687|ref|NP_619600.2| pre-mRNA processing factor
8 [Mus musculus]
(2335 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
18874 674 0.0
30886 272 1e-72
25842 261 3e-69
17773 170 5e-42
26296 32 4.0
>18874
Length = 1177
Score = 674 bits (1740), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 328/360 (91%), Positives = 344/360 (95%)
Frame = -2
Query: 824 PIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKR 883
PIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKR
Sbjct: 1080 PIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKR 901
Query: 884 HLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPA 943
HLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKP+
Sbjct: 900 HLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPS 721
Query: 944 DTEPPPLLVYKWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDXXXXXXXXXXIVDH 1003
D+EPPPLL YKWCQGINNLQDVW+T EGECNVM+ES FEKMYEKID IVDH
Sbjct: 720 DSEPPPLLTYKWCQGINNLQDVWDTGEGECNVMMESTFEKMYEKIDLTLLNRLLRLIVDH 541
Query: 1004 NIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAG 1063
NIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQ+YGLV+DLLVLGLHRASEM+G
Sbjct: 540 NIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQFYGLVLDLLVLGLHRASEMSG 361
Query: 1064 PPQMPNDFLSFQDIATEAAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNE 1123
PPQMPNDFL+FQD+ TE AHPIRL+ RYIDRIHIFFRF+A+EARDLIQRYLTEHPDPNNE
Sbjct: 360 PPQMPNDFLTFQDVVTETAHPIRLYSRYIDRIHIFFRFSAEEARDLIQRYLTEHPDPNNE 181
Query: 1124 NIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNP 1183
NIVGYNNKKCWPRD+RMRLMKHDVNLGRAVFWDI+NRLPRSVTT+QWE+SFVSVYSKDNP
Sbjct: 180 NIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIQNRLPRSVTTIQWESSFVSVYSKDNP 1
Score = 45.1 bits (105), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = -1
Query: 792 HNYLKDGPYIXXXXXXXXXXXXXHWLESRRFSPIPFP 828
+NYLK GPYI HWLESRRFSP P P
Sbjct: 1177 YNYLKXGPYITAEEAVAIYTTMVHWLESRRFSPHPLP 1067
>30886
Length = 399
Score = 272 bits (695), Expect = 1e-72, Method: Composition-based stats.
Identities = 124/132 (93%), Positives = 130/132 (98%)
Frame = -2
Query: 1180 KDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQR 1239
KDNPNLLFNMCGFECR+LPKCRT++EEFTH+DGVWNLQNEVTKERT QCFLRVD+ESM R
Sbjct: 398 KDNPNLLFNMCGFECRVLPKCRTTHEEFTHRDGVWNLQNEVTKERTXQCFLRVDEESMNR 219
Query: 1240 FHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRI 1299
FHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRI
Sbjct: 218 FHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRI 39
Query: 1300 KIGLNSKMPSRF 1311
KIGLNSKMPSRF
Sbjct: 38 KIGLNSKMPSRF 3
>25842
Length = 431
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/143 (87%), Positives = 128/143 (89%)
Frame = +2
Query: 627 CGFWAAGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELR 686
CG WA GWRVW+FFMRGITPLLERWLGNLL+RQFEGRHSKGVAKTVTKQRVESHFDLELR
Sbjct: 2 CGIWAPGWRVWMFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELR 181
Query: 687 AAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAK 746
AAVMHDILDMMPEGIKQNKART + NIPWKVPGLPTPIENMILRYVKAK
Sbjct: 182 AAVMHDILDMMPEGIKQNKARTDPAASV*GLEVLEGNIPWKVPGLPTPIENMILRYVKAK 361
Query: 747 ADWWTNTAHYNRERIRRGATVDK 769
ADWWTNTAHYNRERIRRGATVDK
Sbjct: 362 ADWWTNTAHYNRERIRRGATVDK 430
>17773
Length = 445
Score = 170 bits (431), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = -2
Query: 1799 TTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQP 1858
+TKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQP
Sbjct: 249 STKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQP 70
Query: 1859 KQIIVTRKGMLDPLEVHLLDFPN 1881
KQIIVTRKGMLDPLEVHLLDFPN
Sbjct: 69 KQIIVTRKGMLDPLEVHLLDFPN 1
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/75 (89%), Positives = 70/75 (93%)
Frame = -1
Query: 1421 TLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGG 1480
TLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGG
Sbjct: 445 TLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGG 266
Query: 1481 VEGILEHTLFKGTYF 1495
VEGILEH + ++
Sbjct: 265 VEGILEHQAHQRSHL 221
>26296
Length = 856
Score = 31.6 bits (70), Expect = 4.0, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 2150 QWGTHQTVHLPSQLPQHEYLKEMEPLGWIHTQPNESPQL 2188
QWG H + P+ + + L EM P+G PN S QL
Sbjct: 157 QWGPHPKMEGPTAVEISKQLNEMVPIGQARRAPNVSGQL 41
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|126032329|ref|NP_034236.2| eukaryotic translation
elongation factor 1 alpha 1 [Mus musculus]
(462 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
15991 583 0.0
00709 453 e-128
22349 143 1e-34
16686 64 9e-11
15617 50 2e-06
04430 28 0.019
31464 33 0.31
14064 32 0.60
>15991
Length = 1629
Score = 583 bits (1504), Expect(3) = 0.0, Method: Compositional matrix adjust.
Identities = 284/336 (84%), Positives = 300/336 (89%)
Frame = -3
Query: 44 KEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMI 103
+EAAEMGKGSFKYAWVLDKLKAERERGITIDI+LWKFET KYYVTIIDAPGHRDFIKNMI
Sbjct: 1546 EEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETDKYYVTIIDAPGHRDFIKNMI 1367
Query: 104 TGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYS 163
TGTSQADCAVL+VAAG GEFEAGISK+GQTREHALLAYTLGVKQLIV VNKMDSTEPPYS
Sbjct: 1366 TGTSQADCAVLVVAAGKGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDSTEPPYS 1187
Query: 164 QKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGSA 223
R+EEI KEVSTYIKKIGYNP+TVAFVPISGW GDNM+E S + WK+ RK+G A
Sbjct: 1186 MDRFEEIKKEVSTYIKKIGYNPNTVAFVPISGWVGDNMMEASTKI--VHKWKIERKEGKA 1013
Query: 224 SGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPV 283
G TL EALD ILPPTRPTDK LRLPLQDVYKIGGIGTVPVGRVETG+LKPG VVTFAP
Sbjct: 1012 EGETLKEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVTFAPG 833
Query: 284 NVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQ 343
+TTEVKSVEMHHE L EALPGDNVGFNVKNVSVKD+RRGNVAGDSKNDPP A F AQ
Sbjct: 832 GLTTEVKSVEMHHEQLQEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPKGAKNFYAQ 653
Query: 344 VIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKI 379
VIILNHPG I AGYAPVLDCHTAHIACKF EL+ ++
Sbjct: 652 VIILNHPGMIHAGYAPVLDCHTAHIACKFEELEREV 545
Score = 104 bits (259), Expect(3) = 0.0, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = -1
Query: 375 LKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432
LKEK D RSGKKLED PK +KSGDAA+V +VP KPMCVE+F DYPPLGRFAVRDM+QT
Sbjct: 558 LKEKCDXRSGKKLEDNPKCVKSGDAAMVTLVPSKPMCVEAFVDYPPLGRFAVRDMKQT 385
Score = 54.3 bits (129), Expect(3) = 0.0, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -2
Query: 17 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAE 48
DSGKSTTTGHLIYKCGGIDKR IEK + +
Sbjct: 1625 DSGKSTTTGHLIYKCGGIDKRVIEKLRRSCRD 1530
>00709
Length = 1076
Score = 453 bits (1166), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/261 (83%), Positives = 235/261 (90%), Gaps = 4/261 (1%)
Frame = -2
Query: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVL
Sbjct: 907 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 728
Query: 61 DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV 120
DKLKAERERGITIDI+LWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA+G
Sbjct: 727 DKLKAERERGITIDIALWKFETTKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVASGT 548
Query: 121 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK 180
GEFEAGISK GQTREHALLAYTLGVKQLI+GVNKMDST P YS+ R+ EI KEVS YIKK
Sbjct: 547 GEFEAGISKEGQTREHALLAYTLGVKQLIIGVNKMDSTSPAYSETRFNEIQKEVSGYIKK 368
Query: 181 IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGS----ASGTTLLEALDCIL 236
IG+NP VAFVPISG++GDNM+ S M W+KGW++ RK+G+ ASG TL +ALD IL
Sbjct: 367 IGFNPKAVAFVPISGFHGDNMIXESEKMGWYKGWEIERKEGTKEVKASGKTLFDALDSIL 188
Query: 237 PPTRPTDKPLRLPLQDVYKIG 257
PPTRPT KPLRLPLQDVYKIG
Sbjct: 187 PPTRPTGKPLRLPLQDVYKIG 125
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = -3
Query: 237 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAP 282
PP P P + ++ GIGTVPVGRVETG+LKPGMVVTFAP
Sbjct: 186 PPLVPLASLCVCPCRMSTRLEGIGTVPVGRVETGILKPGMVVTFAP 49
>22349
Length = 662
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Frame = -2
Query: 5 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLK 64
K HIN+V IGHVD+GKST GHL+Y G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 499 KDHINVVFIGHVDAGKSTIGGHLLYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNN 320
Query: 65 AERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF- 123
ERE+G T+++ FET + T++DAPGH+ F+ NMI G SQAD A+L+++A GEF
Sbjct: 319 EEREKGKTVEVGRAFFETELKHFTVLDAPGHKSFVPNMICGASQADLAILVISARRGEF* 140
Query: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMD 156
+ +S+ + GV+ LIV +NKMD
Sbjct: 139 DWFLSEEARHVSMPCW*RRQGVRHLIVLINKMD 41
>16686
Length = 689
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%)
Frame = -2
Query: 289 VKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILN 348
VK+V + + A GD+V F++ N+ + V G V D + P A A+V++ N
Sbjct: 649 VKNVTVDDLSSQLAFAGDHVTFSLTNIDMTSVNVGFVLCDPMS-PTKCAIRIRAKVVLFN 473
Query: 349 HPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGK 408
I+ G+ V + F L I++ +G +++ PK L +AIV++ +
Sbjct: 472 LDLPITRGFPVVFHXQCVNEPAVFKRLVATINKSTGDIVKNRPKCLTKNSSAIVELEFER 293
Query: 409 PMCVESFSDYPPLGRFAVRDMRQT 432
+CVE +S+Y LGRF +R+ T
Sbjct: 292 SVCVELYSEYRDLGRFMLRNSGHT 221
>15617
Length = 595
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Frame = -3
Query: 2 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLD 61
G++K N+ VI HVD GKST T L+ K G I +A+ G+ F D
Sbjct: 449 GQQKNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------ASAKAGETRFT-----D 315
Query: 62 KLKAERERGITID---ISLW--------KF-------ETSKYYVTIIDAPGHRDFIKNMI 103
K E+ER ITI ISL+ K+ + + + + +ID+PGH DF +
Sbjct: 314 TRKDEQERCITIKSTAISLYYELKKDDMKYIKQDYDQDNNAFLINLIDSPGHVDFSSEVT 135
Query: 104 TGTSQADCAVLIV 116
D A+++V
Sbjct: 134 AALRVTDGALVVV 96
>04430
Length = 2037
Score = 28.5 bits (62), Expect(2) = 0.019, Method: Compositional matrix adjust.
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 258 GIGTVPVGRVETG 270
GIGTVPVGRVETG
Sbjct: 2027 GIGTVPVGRVETG 1989
Score = 26.9 bits (58), Expect(2) = 0.019, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 270 GVLKPGMVVTFAPVNVTTEVKS 291
G+LKPGMVVT P V+TEV
Sbjct: 1992 GILKPGMVVTL-PQPVSTEVSC 1930
>31464
Length = 946
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 35/89 (39%)
Frame = +1
Query: 238 PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHE 297
P R D P + + + GTV G +G + V + V +VKS++M
Sbjct: 259 PRRNPDGPFIFSVDHCFSLRXQGTVLTGTAISGSVAVNDTVEIPAMKVQKKVKSMQMFRN 438
Query: 298 ALSEALPGDNVGFNVKNVSVKDVRRGNVA 326
+ + GD G V K + RG V
Sbjct: 439 PVDRLVQGDRAGICVTQFDPKLLERGLVC 525
>14064
Length = 1723
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 81 ETSKYYVTIIDAPGHRDFIKNMITGTSQA--DCAVLIVAAGVGEFEAGISKNGQTREHAL 138
++S +T+ID GH +++ I G + D A+L+V+A G G T+EH
Sbjct: 122 QSSSKLITLIDLAGHHRYLRTTIVGLTGNCPDFAMLVVSATSGIV-------GMTKEHLG 280
Query: 139 LAYTLG 144
A LG
Sbjct: 281 YALALG 298
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|146231996|ref|NP_067498.4| HECT, UBA and WWE domain
containing 1 [Mus musculus]
(4378 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02386 739 0.0
05501 326 1e-88
35625 224 5e-67
13725 183 1e-45
30230 183 1e-45
19989 122 4e-27
21239 96 3e-19
15511 94 2e-18
21309 69 8e-18
19738 70 5e-16
05524 60 5e-12
33148 59 4e-08
19350 40 0.016
31463 38 0.086
19756 38 0.10
>02386
Length = 2222
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/442 (78%), Positives = 393/442 (88%), Gaps = 3/442 (0%)
Frame = +2
Query: 3940 SREPSSMHISSSLPPDTQKFLRFAETHRTVLNQILRQSTTHLADGPFAVLVDYIRVLDFD 3999
+RE S+ I+ LPPDTQKFL+FAETHRTVLNQILRQST LADGPF+VLVD+ R+LDFD
Sbjct: 89 TRENSAACITH-LPPDTQKFLKFAETHRTVLNQILRQSTLPLADGPFSVLVDHTRMLDFD 265
Query: 4000 VKRKYFRQELERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEG 4059
VKR+YFRQELER++EG+R+ED+ VHVRR+HVFEDS+REL R++P+E K R YIVFEGEEG
Sbjct: 266 VKRRYFRQELERMEEGMRREDLPVHVRREHVFEDSFRELFRRNPDEWKQRFYIVFEGEEG 445
Query: 4060 QDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVA 4119
QDAGGLLREWY+IISRE+FN Y LF+ P D VTYTINPSSH N NHLSYFKFVGRI+A
Sbjct: 446 QDAGGLLREWYLIISREIFNENYVLFKRYPRDGVTYTINPSSHFNSNHLSYFKFVGRIIA 625
Query: 4120 KAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGY---DL 4176
KA+YDN+LLECYFTRSFYKH+LG V+YTDME ED FYQ LV+LLEND++ +G DL
Sbjct: 626 KAIYDNKLLECYFTRSFYKHVLGLPVKYTDMECEDIMFYQSLVFLLENDITDMGAALGDL 805
Query: 4177 TFSTEVQEFGVCEVRDLKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYE 4236
FS EV+EFGV E RDL NG+NI VTEENK+EYV LVCQM+MTGAIR+QL AFLEGFY+
Sbjct: 806 NFSAEVEEFGVRETRDLIENGSNIGVTEENKREYVKLVCQMKMTGAIRQQLNAFLEGFYD 985
Query: 4237 IIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQAD 4296
IIPK+L++IFTEQELELLISGLPTIDIDDLK+NTEYHKYQ S+QIQWFWRALRSFDQA+
Sbjct: 986 IIPKKLVAIFTEQELELLISGLPTIDIDDLKANTEYHKYQPTSLQIQWFWRALRSFDQAE 1165
Query: 4297 RAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYES 4356
RA FLQFVTGTSKVPLQGFA LEGMNG QKFQIHRDDRSTDRLPSAHTCFNQLDLPAYE+
Sbjct: 1166 RANFLQFVTGTSKVPLQGFATLEGMNGHQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYET 1345
Query: 4357 FEKLRHMLLLAIQECSEGFGLA 4378
++KLR MLLLA+ ECSEGFGLA
Sbjct: 1346 YDKLRKMLLLAVSECSEGFGLA 1411
>05501
Length = 1740
Score = 326 bits (836), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 229/346 (66%)
Frame = -1
Query: 4031 FEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPG 4090
+EDS+ ++ R P +++ RLYI+F+GEEG D GG+ REW+ +S ++ NPMY LF +
Sbjct: 1683 YEDSFAQIMRLQPFDLRRRLYIIFKGEEGLDYGGVAREWFFHLSHDVLNPMYCLFEYASN 1504
Query: 4091 DRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDM 4150
+ + INP+S NP+HL YF+F+GR +A A+Y + ++ FT FYK +L K + D+
Sbjct: 1503 NNYSLQINPASSVNPDHLLYFRFIGRFIAMALYHGKFIDSGFTLPFYKRMLSKKLTLKDL 1324
Query: 4151 ESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQEFGVCEVRDLKPNGANILVTEENKKEY 4210
E+ D ++Q L ++ +N+V G +L F + + G E +LKP G+ I VTEENK+EY
Sbjct: 1323 ETIDGEYFQSLQWVKDNNVEESGLELFFCADFEVLGKVENHELKPGGSEIKVTEENKEEY 1144
Query: 4211 VHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSNT 4270
++L+ Q R + + +Q AFLEGF E++P + + F E+ELEL++ G+ +D+DD + NT
Sbjct: 1143 LNLMTQWRFSRGVEEQTKAFLEGFNEVVPLQWLQYFDERELELMLCGMQEVDVDDWERNT 964
Query: 4271 EYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIH 4330
Y YQ NS Q+ WFW+ +R D R + LQFVTGT ++P+ GFA L G NG Q+F I
Sbjct: 963 IYRHYQRNSKQVTWFWKFVREIDNEKRTRLLQFVTGTCRLPVGGFAELMGSNGPQRFCIE 784
Query: 4331 RDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 4376
+ + T LP +HTCFN++DLP Y S+E+L L LAI+E +EGFG
Sbjct: 783 KVGKET-WLPRSHTCFNRIDLPPYRSYEQLVEKLNLAIEE-TEGFG 652
>35625
Length = 535
Score = 224 bits (571), Expect(2) = 5e-67, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 127/152 (83%)
Frame = -2
Query: 273 RLQAVQARLHAISILVYSNALQESANSILYNGLIEELVDVLQITDKQLMEIKAASLRTLT 332
RLQ VQARL A+SILVY+NA+QE+ N ILY GLIEELVD+++I D L++IKAA+LRTLT
Sbjct: 534 RLQCVQARLQAVSILVYANAIQENLNVILYPGLIEELVDIIEIADPGLVDIKAAALRTLT 355
Query: 333 SIVHLERTPKLSSIIDCTGTASYHGFLPVLVRNCIQAMIDPSMDPYPHQFATALFSFLYH 392
SI+H++R PKL IID TG ASYHGFLPVLVR CIQ MI+P +P+P Q+ATALFSFLYH
Sbjct: 354 SIIHIDRNPKLVIIIDTTGAASYHGFLPVLVRTCIQHMIEPEQEPFPQQYATALFSFLYH 175
Query: 393 LASYDAGGEALVSCGMMEALLKVIKFLGDEQD 424
+ASY+ G EALV+CGMMEALLKVI + QD
Sbjct: 174 MASYENGVEALVACGMMEALLKVINWYSQGQD 79
Score = 52.4 bits (124), Expect(2) = 5e-67, Method: Composition-based stats.
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -1
Query: 425 QITFVTRAVRVVDLITNLDMAAFQSH 450
ITFVTRAVRV+DLITN+DMAAFQ+H
Sbjct: 79 HITFVTRAVRVIDLITNMDMAAFQAH 2
>13725
Length = 700
Score = 183 bits (465), Expect = 1e-45, Method: Composition-based stats.
Identities = 93/228 (40%), Positives = 129/228 (56%)
Frame = +2
Query: 4003 KYFRQELERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDA 4062
K R E + L + + V R+ +FEDSYR++ + +E++ RL + F GEEG D
Sbjct: 2 KVLRHEFQSLQP--QTGHCRLEVSREEIFEDSYRQVMKMRSKELRKRLMVKFHGEEGLDY 175
Query: 4063 GGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAV 4122
GG+ REW+ ++S EM NP Y LF+ S D T INP S NP HLSYF FVGR++ A+
Sbjct: 176 GGVAREWFYLLSHEMLNPYYGLFQYSREDIYTLQINPDSGVNPEHLSYFHFVGRVIGMAI 355
Query: 4123 YDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEV 4182
+ L+ FT FYK +LGK D+ES D ++ L ++LEN++ + + TFS E
Sbjct: 356 FHGHYLDGGFTMPFYKQLLGKPATLEDLESVDPDLHRSLCWMLENNIENV-LEHTFSVEH 532
Query: 4183 QEFGVCEVRDLKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAF 4230
FG +LKP G + VTE+NK EYV L R+ I Q A
Sbjct: 533 NSFGKLREYELKPGGNDTKVTEDNKHEYVRLYVHWRLMRGIEAQFLAL 676
>30230
Length = 738
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 146/240 (60%), Gaps = 9/240 (3%)
Frame = +2
Query: 1610 LQSNSNNWRWFDDRSGRWCSYSASNNSTIDSAWKSGETSVRFTAGRRRYTVQFTTMVQVN 1669
L++ S+ W+WFDD +GRWC YS NN TI A+ +G+ SVRF AGRR+Y VQFTTM+Q+N
Sbjct: 2 LRAGSSTWKWFDDSTGRWCKYSIGNNKTIHDAYMAGQXSVRFQAGRRKYCVQFTTMMQLN 181
Query: 1670 EETGNRRPVMLTLLRVPR------LSKNSKSSNGQXXXXXXXXXXXXDIKHKENKGNDIP 1723
EETGNRRPVML+ VP ++K K + KE+ +
Sbjct: 182 EETGNRRPVMLS---VPTSEEKLAIAKEDKQKTLITAAAMVPASSATPVTVKES----VS 340
Query: 1724 LALESTNTEKEASLDETK---IGEILIQGLTEDMVTVLIRACVSMLGVPVDPDTLHATLR 1780
+ E E E E K I + L ED +T +I + VS++ +PV+ +TLHA LR
Sbjct: 341 VKTEEGKMETETGPVEEKKPATTTISLVRLNEDQITTIISSLVSLISIPVESETLHALLR 520
Query: 1781 LCLRLTRDHKYAMMFAELKSTRMILNLTQSSGFNGFTPLVTLLLRHIIEDPCTLRHTMEK 1840
L LRLTR+H +A+ FA+L+ RM+LNLTQS F GF L TLL RH++++P LRH MEK
Sbjct: 521 LMLRLTREHGHAVQFAQLRGPRMLLNLTQSVAFPGFLSLATLLFRHVLDEPTALRHCMEK 700
>19989
Length = 464
Score = 122 bits (305), Expect = 4e-27, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = -2
Query: 575 SLQDNGLTDVMLHALLIKDVPATREVLGSLPNVFSALCLNARGLQSFVQCQPFERLFKVL 634
SL DN + + + VPATREVL SLPNVFSALCLNARGL++FV C+PF+RLFKVL
Sbjct: 262 SLFDNKVF*IGFELNGVNQVPATREVLASLPNVFSALCLNARGLEAFVACRPFDRLFKVL 83
Query: 635 LSPDYLPAMRRRRSSDPLGDTA 656
LSPDYLPAMRRRRS+DP G A
Sbjct: 82 LSPDYLPAMRRRRSADPFGQYA 17
>21239
Length = 1264
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 108/231 (46%), Gaps = 8/231 (3%)
Frame = +1
Query: 4156 HFYQGLVYLLENDVSTLGYDLTFSTEVQEFGVC-----EVRDLKPNGANILVTEENKKEY 4210
+F+ + L +N + LG ++ ++Q+ G+ +LK G +I VT N EY
Sbjct: 1 YFFAMFIVLSQNGILLLGSEVLIQ-DIQDLGLYFHLPGYNIELKKGGKDIPVTLHNLHEY 177
Query: 4211 VHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISG--LPTIDIDDLKS 4268
+ LV + + +Q AF EGF + + F +ELE L G ++ L
Sbjct: 178 LQLVIHWSLVEGVSRQFEAFREGFESVFSLSSLQCFYPEELEQLFCGSQWGPWEVKMLME 357
Query: 4269 NTE-YHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKF 4327
N H Y +S + + ++ L SFD + FLQFVTG+ ++P+ GF +L I +
Sbjct: 358 NCRPDHGYTHDSKAVVFLYQLLASFDLQQQRHFLQFVTGSPRLPVGGFRSLTPPLTIVRK 537
Query: 4328 QIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFGLA 4378
+ D LPS TC N L LP Y S + +RH L A E F L+
Sbjct: 538 TFEAGENPDDFLPSVMTCVNYLKLPDYSSIDIMRHKLHTAASEGQLSFHLS 690
>15511
Length = 1754
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Frame = -2
Query: 2493 IIEFDNMF-SSATDIPPSPGNIPTTHPLMVRHADHXXXXXXXXXXXXXXXXXIGRSQ-RT 2550
I + DN +S +PP+P + HPL+VR +D+ + RS+ R
Sbjct: 1135 IHDSDNATEASVPSLPPAPSGVTAAHPLLVRQSDNLLNVR------------VPRSRHRA 992
Query: 2551 LRQLTANTGHTIHV--HYPGNRQPNPPLILQRLLGPSAAADIXXXXXXXXXXXRGRARLL 2608
+ T +T HT HV H + +PNPP+ILQRLLGP+A ADI
Sbjct: 991 SYRFTPST-HTFHVNMHGAASSRPNPPVILQRLLGPNATADILQL--------------- 860
Query: 2609 VGNDDVHIIARSDDELLDDFFHDQSTATSQAGTLSSIPTALTRWTEECKVLDAESMHDCV 2668
H + + D + D + S G +SSIP+ LTRWTEE +VLD +S+HDCV
Sbjct: 859 -----THTLPQ-------DQYSDSLSVGS--GVMSSIPSTLTRWTEEARVLDGDSVHDCV 722
Query: 2669 SVVKVPIVN 2677
+V+K +V+
Sbjct: 721 TVIKPEVVD 695
>21309
Length = 730
Score = 68.6 bits (166), Expect(2) = 8e-18, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 35/64 (54%)
Frame = -2
Query: 1076 GSPVRQRXXXXXXXXXXXXXXXXXXXXXXLTKLLTKGLSWQPPPYTPTPRFRLTFFICSV 1135
GSPVRQR LT+LL GLSW+PP Y P P+ RLTF +CSV
Sbjct: 192 GSPVRQRRSQQTANQGGSPSPAARAVASALTRLLGNGLSWEPPHYAPVPKLRLTFLVCSV 13
Query: 1136 GFTS 1139
GFTS
Sbjct: 12 GFTS 1
Score = 43.1 bits (100), Expect(2) = 8e-18, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 1035 KSKITPAMAARIKQIKPXXXXXXXXXXXXXXXFGLLVKLCVGSPV 1079
KSK++P + A+I+Q+KP FGLLVKLCVG P
Sbjct: 316 KSKVSPVLQAQIRQLKPLLSVSSRLGRALAELFGLLVKLCVGLPC 182
Score = 35.4 bits (80), Expect = 0.55, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = -2
Query: 960 LPSGCEFGQADMQKLVPKD 978
LP GC+FG+ADM +++P+D
Sbjct: 729 LPQGCQFGRADMDRIIPQD 673
>19738
Length = 375
Score = 70.5 bits (171), Expect(2) = 5e-16, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +2
Query: 4192 DLKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQEL 4251
+L P G NI VT +NK Y+ + Q R+ ++++++ +FL G E+IP L+SIF E EL
Sbjct: 8 ELMPGGGNIRVTNKNKLSYLDCLAQYRLATSVKEEVESFLRGLNELIPDNLLSIFDEYEL 187
Query: 4252 ELLISGLPTIDIDDLK 4267
ELL+ G+ T + D K
Sbjct: 188 ELLMCGMGTYSLADFK 235
Score = 35.0 bits (79), Expect(2) = 5e-16, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 4282 IQWFWRALRSFDQADRAKFLQFVTGTSKVP 4311
+ WFW + SF + A+ LQF TG S++P
Sbjct: 280 LDWFWTVIASFTEEQMARLLQFTTGCSQLP 369
>05524
Length = 2623
Score = 60.5 bits (145), Expect(2) = 5e-12, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +2
Query: 4254 LISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQ 4313
L G P I + LKS Y ++ + +QWFW + F A+R+ FL+FV G +++P +
Sbjct: 485 LWCGSPDIPLTLLKSVATYKGIEATAPLVQWFWEVMDEFSTAERSLFLRFVWGRTRLP-R 661
Query: 4314 GFAALEGMNGIQKFQIHRDDRSTDR-LPSAHTCFNQLDLPAYESFEKLRHMLLLAIQEC 4371
A G + + Q+ D LP ++TCF L +P Y L+ L AI C
Sbjct: 662 TIADFRGRDFV--LQVLDKYNPPDHFLPESYTCFFLLKMPRYSDKLVLKEKLKYAIHFC 832
Score = 31.2 bits (69), Expect(2) = 5e-12, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 4202 VTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLI 4255
+ +N+ +Y+ + R+ +Q+ EG +IP L+S+FT ELE ++
Sbjct: 334 INPDNRADYIKMAINYRLQ-EFDQQVRWVREGMSRVIPVPLLSLFTGLELETMV 492
>33148
Length = 687
Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +3
Query: 4266 LKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQ 4325
L T Y + I++++FW A+++F DR++FL+FVTG ++P A L G
Sbjct: 18 LSKTTYYDDLEETDIRVKYFWEAMKAFSNEDRSRFLRFVTGRRRLP----APLVISTG-- 179
Query: 4326 KFQIHRDDRSTDRLPSAHTCFNQLDLPAYESF----EKLRH 4362
+ D LP + TC N L LP Y S EKLR+
Sbjct: 180 ------KGDTIDSLPESSTCANMLYLPYYSSAKVAEEKLRY 284
>19350
Length = 428
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -3
Query: 4089 PGDRVTYTINPSSHCN-PNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRY 4147
PG R Y+ P + N P L+ F+ VGRI+ + N + + R K++LG+S+ +
Sbjct: 243 PGKRGYYS--PRAGRNTPERLNAFRNVGRIMGLCLLQNEICPLFLNRHVLKYVLGRSISW 70
Query: 4148 TDMESEDYHFYQGL 4161
D+ D Y+ L
Sbjct: 69 HDLAFFDPVMYESL 28
>31463
Length = 495
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 4337 DRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFGLA 4378
DRLP+A TC N L LP ++ + LR LL AI E GF L+
Sbjct: 16 DRLPTASTCMNLLKLPEFKDEKTLRTKLLYAI-ESGAGFELS 138
>19756
Length = 431
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -1
Query: 1643 KSGETSVRFTAGRRRYTVQFTTMVQVNEETGNRRPVMLTL 1682
+ GE + +A R Y V F TM Q+NE+TG RPV L
Sbjct: 383 RQGEDEMTLSAMGRIYIVDFNTMQQINEDTGTARPVQRKL 264
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|148747128|ref|NP_032434.3| intergral membrane protein
1 [Mus musculus]
(705 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08971 753 0.0
03996 39 0.006
08629 29 6.3
02610 28 9.6
>08971
Length = 3836
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/443 (81%), Positives = 398/443 (89%)
Frame = -3
Query: 7 LRLSYEKQDTLLKLLILSMAAVLSFSTRLFAVLRFESVIHEFDPYFNYRTTRFLAEEGFY 66
LR+S +KQDTLLK+++L++AAVLSFSTRLF+VLRFESVIHEFDPYFNYRTTRFLAEEGFY
Sbjct: 3711 LRMSPDKQDTLLKMMVLAIAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFY 3532
Query: 67 KFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSF 126
FHNWFDDRAWYPLGRIIGGTIYPGLM+TSAAIYHVL+FF+ITID+RNVCVFLAPLFSSF
Sbjct: 3531 NFHNWFDDRAWYPLGRIIGGTIYPGLMVTSAAIYHVLNFFNITIDVRNVCVFLAPLFSSF 3352
Query: 127 TTIVTYHLTKELKDXXXXXXXXXMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKA 186
TTIVT+ LTKELKD M+A+VPGYISRSVAGSYDNEGIAIFCMLLTYY+WIKA
Sbjct: 3351 TTIVTFFLTKELKDASAGLVAASMLAIVPGYISRSVAGSYDNEGIAIFCMLLTYYLWIKA 3172
Query: 187 VKTGSIYWAAKCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCL 246
VKTGSIYW A C+LAYFYMVSSWGGYVFLINLIPLHVL LM+TGRFSH+IY+AY TVYCL
Sbjct: 3171 VKTGSIYWGALCSLAYFYMVSSWGGYVFLINLIPLHVLALMVTGRFSHKIYLAYSTVYCL 2992
Query: 247 GTILSMQISFVGFQPVLSSEHMAAFGVFGLCQIHAFVDYLRSKLNPQQFEVLFRSVISLV 306
GT+LSMQISFVGFQPV SSEHMAA GVFGLCQIHAFVDYLRS+L+ +QF +LFRS++ L
Sbjct: 2991 GTLLSMQISFVGFQPVQSSEHMAALGVFGLCQIHAFVDYLRSRLSREQFNLLFRSLVLLT 2812
Query: 307 GFVLLTVGALLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQL 366
G + A+ GKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSS+YFDLQL
Sbjct: 2811 GTIAFGAAAVATAMGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSFYFDLQL 2632
Query: 367 LVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVL 426
LVFMFPVGLY+CFS L+DA IFI+MYGVTS+YF+ VMVRLMLVLAPVMCILSGIGVS +L
Sbjct: 2631 LVFMFPVGLYFCFSKLTDANIFIVMYGVTSIYFAGVMVRLMLVLAPVMCILSGIGVSAIL 2452
Query: 427 STYMKNLDISRPDKKSKKQQDST 449
+ YMKNLD SR DK K + T
Sbjct: 2451 TAYMKNLDSSRKDKNXKNRTPPT 2383
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/269 (75%), Positives = 227/269 (84%), Gaps = 3/269 (1%)
Frame = -2
Query: 437 RPDKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGD 496
+P ++ K+ DSTYP+KNE+A+G+IL++ FLI YTFH TWVTSEAYSSPSIVLSARGGD
Sbjct: 2425 QPQRQEPKKPDSTYPLKNEIANGVILIITAFLILYTFHCTWVTSEAYSSPSIVLSARGGD 2246
Query: 497 GSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVG 556
GSRIIFDDFREAYYWLRHNTPE++KVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVG
Sbjct: 2245 GSRIIFDDFREAYYWLRHNTPENSKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVG 2066
Query: 557 QAMASTEEKAYEIM---RELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTETGRHIK 613
QAMASTEE + R+L +S L + LWMVRIGGST+ G+HI
Sbjct: 2065 QAMASTEESVRDNARA*RQLRLSDFWWPHWLLLRRHQ----QVLWMVRIGGSTDRGKHIH 1898
Query: 614 ENDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGFDRVRNAEIGNKDF 673
E DYYTP GEFRVDREGSPVLLNCLMYKMCYYRFG VYTE+ +P G+DRVRNAEIGNKDF
Sbjct: 1897 EMDYYTPQGEFRVDREGSPVLLNCLMYKMCYYRFGAVYTESGQPTGYDRVRNAEIGNKDF 1718
Query: 674 ELDVLEEAYTTEHWLVRIYKVKDLDNRGL 702
ELDVLEEAYTTEHWLVRIYKVKDL+NRG+
Sbjct: 1717 ELDVLEEAYTTEHWLVRIYKVKDLENRGV 1631
>03996
Length = 1105
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -2
Query: 663 VRNAEIGNKDFELDVLE 679
VRNAEIGNKDFELDVLE
Sbjct: 1104 VRNAEIGNKDFELDVLE 1054
>08629
Length = 440
Score = 29.3 bits (64), Expect = 6.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 332 SLLDPSYAKNNIPIIASVSEHQPTTWSSYYF 362
++L P +A NIP + S+ P W SY++
Sbjct: 328 NMLTP*FACTNIPQVQEYSKKNPPEWVSYHY 236
>02610
Length = 697
Score = 28.5 bits (62), Expect = 9.6, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 624 FRVDREGSPVLLNCLMYKMCYYR-FGQVYTEAKRPPGFDRVRNAEIGNKDF--ELDVLEE 680
F ++++ + L C+++ MCY + V ++ P F V + K F + + L E
Sbjct: 32 FEINKQMRTLHLQCVLFNMCYLQHVRSVCAQSSNPTFFHFVFGSSFTTKFFFKQEN*LNE 211
Query: 681 AYTTEHWLVRIYKVKDLDNRGLSRT 705
+ H L+ + L RG++ T
Sbjct: 212 THANNHHLIISEIMTMLHKRGMATT 286
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|19705578|ref|NP_031535.2| vacuolar H+ATPase B2 [Mus
musculus]
(511 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00590 631 0.0
37643 84 2e-16
04005 65 9e-11
00095 55 5e-08
16215 54 2e-07
00880 49 6e-06
02237 29 4.5
34886 28 8.3
>00590
Length = 2486
Score = 631 bits (1627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/331 (90%), Positives = 318/331 (96%), Gaps = 1/331 (0%)
Frame = +1
Query: 178 DGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVK-KSKDVVDYSEENFAIVFAAMGV 236
D MNSIARGQKIPIFSAAGLPHNEIAAQICRQ GLVK K V+D ++NFAIVFAAMGV
Sbjct: 1 DTMNSIARGQKIPIFSAAGLPHNEIAAQICRQGGLVKLPGKSVLDDHDDNFAIVFAAMGV 180
Query: 237 NMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVI 296
NME ARFFK DFEENGSM+NVCLFLNLANDPTIERIITPR+ALTTAE++AYQCEKHVLVI
Sbjct: 181 NMEIARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRIALTTAEYMAYQCEKHVLVI 360
Query: 297 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 356
LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM
Sbjct: 361 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 540
Query: 357 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHA 416
PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTR+DH+
Sbjct: 541 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTREDHS 720
Query: 417 DVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFITQGPYENRTVYET 476
DVSNQLYACYAIGKDVQAMKAVVGEEALT +DLLYLEFL KFEKNFI+QG YENRT++E+
Sbjct: 721 DVSNQLYACYAIGKDVQAMKAVVGEEALTPEDLLYLEFLTKFEKNFISQGHYENRTIFES 900
Query: 477 LDIGWQLLRIFPKEMLKRIPQSTLSEFYPRD 507
LDIGWQLLRIFPKEMLKRIPQSTL+++YPRD
Sbjct: 901 LDIGWQLLRIFPKEMLKRIPQSTLAKYYPRD 993
>37643
Length = 1463
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 2/252 (0%)
Frame = -3
Query: 163 RIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDY 222
R +E +QTGI A+D + I RGQ+ I +A + +K + +
Sbjct: 1410 RTSVKEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAVAVDTI----INQKRLNDGNN 1243
Query: 223 SEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTA 282
++ ++ A+G T + +M + A+D + + P
Sbjct: 1242 EKQKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCAMG 1063
Query: 283 EFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE 342
EF H L+I D+S A A R++S PGR +PG ++ + + ERA ++
Sbjct: 1062 EFF-RDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN 886
Query: 343 GRNG--SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSR 400
NG S+T +P++ D++ IP IT+GQI+++ +L + I P INV S+SR
Sbjct: 885 DDNGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR 706
Query: 401 LMKSAIGEGMTR 412
+ +A M +
Sbjct: 705 VGAAAQTRAMKQ 670
>04005
Length = 913
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Frame = +1
Query: 291 KHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQ 350
+ VL+ + ++ + +A EVSA +P G+ + TD+ T+ ER + GSIT
Sbjct: 7 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSITS 180
Query: 351 IPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMK-SAIGEG 409
+ + +P DD+T P P T + + R + IYP ++ L S SR++ + +GE
Sbjct: 181 VQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGE- 357
Query: 410 MTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFITQGPYE 469
H ++ + K +Q + A++G + L+ +D L + +K ++ F++Q P++
Sbjct: 358 ----HHYKIARAVQKILQDFKSLQDIIAILGMDELSEEDKLTVSRARKMQR-FLSQ-PFQ 519
Query: 470 NRTVY 474
V+
Sbjct: 520 VAEVF 534
>00095
Length = 572
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Frame = -2
Query: 238 METARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCE--KHVLV 295
M T+R D + + V L N+P + PR A T ++ E + VL+
Sbjct: 511 MITSRVISLDDDSS----KVSLVYGQMNEPQVH---VPRGADRTDGGRXFRDEEGQDVLL 353
Query: 296 ILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILT 355
+ ++ + +A EVSA +P G+ + TD+ T+ ER GSIT + +
Sbjct: 352 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTNKGSITSVQAIY 179
Query: 356 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAI 406
+P DD+T P P T + + R + IYP ++ L S SR++ I
Sbjct: 178 VPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNI 26
>16215
Length = 1251
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = -3
Query: 254 MDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAA 313
M L N +N P R + +T +E+ +V ++ S +AEALRE+S
Sbjct: 454 MKRTALVANTSNMPVAAREASIYTGITLSEYFR-DMGLNVSMMADSTSRWAEALREISGR 278
Query: 314 REEVPGRRGFPGYMYTDLATIYERAGRV 341
E+P G+P Y+ LA+ YERAGRV
Sbjct: 277 LAEMPADSGYPAYLGARLASFYERAGRV 194
>00880
Length = 2381
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = -1
Query: 115 TGDILRTPVSEDMLGRVFNGSGKPID-RGPVVLAE-DFLDIMGQPINPQCRIYPEEMIQT 172
TG I+ PV +D+LGRV + G PID +GPV E + + I P+ + +E +QT
Sbjct: 1940 TGAIVDVPVGKDLLGRVVDALGNPIDGKGPVGGGERQRVGVKAPGIIPRTSV--KEPMQT 1767
Query: 173 GISAIDGMNSIARGQK 188
GI A+D + I RGQ+
Sbjct: 1766 GIKAVDSLVPIGRGQR 1719
>02237
Length = 2054
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 452 LEFLQKFEKNFITQGPYENRTVY 474
EFLQ FEK + T GPY + ++
Sbjct: 1455 FEFLQSFEKKYTTLGPYAGKWLH 1523
>34886
Length = 777
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 359 DDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLS 399
DDIT + D G + GQ+Y R +PP++ LPS++
Sbjct: 489 DDITEDVIDCKGSLV*GQLYE----GGRPTHPPLSGLPSMA 599
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|20149756|ref|NP_619610.1| eukaryotic translation
initiation factor 4A, isoform 3 [Mus musculus]
(411 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01062 736 0.0
09316 239 1e-63
07310 191 4e-49
00621 188 3e-48
02498 155 4e-38
00739 149 3e-36
01517 146 1e-35
19640 146 2e-35
02054 111 2e-34
09327 130 7e-31
00162 117 7e-27
34295 105 3e-23
00617 104 7e-23
04883 101 6e-22
31899 93 2e-19
14337 91 6e-19
08036 62 8e-19
11160 79 4e-18
12995 81 7e-16
22006 75 6e-14
19151 74 1e-13
19525 74 1e-13
11624 73 2e-13
10649 70 2e-12
33025 69 3e-12
19172 60 1e-09
39583 57 1e-08
17708 56 2e-08
17544 52 4e-07
33083 50 1e-06
03381 48 8e-06
33543 47 2e-05
31781 46 3e-05
30136 45 4e-05
31220 45 7e-05
06438 43 2e-04
11423 41 0.001
12121 37 0.015
08819 28 5.4
>01062
Length = 2138
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/392 (88%), Positives = 372/392 (94%)
Frame = -3
Query: 20 EEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSXXXXXXXXXXXXGRDVI 79
+ED+ VEFETSE+V+VTPTFD MG+RE+LLRGIYAYGFEKPS GRDVI
Sbjct: 2133 QEDLRAVEFETSEDVEVTPTFDNMGIREELLRGIYAYGFEKPSAIQQRAVKPIVKGRDVI 1954
Query: 80 AQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHA 139
AQ+QSGTGKTATFS+SVLQCLDIQ+RETQALIL+PTRELA QIQK +LALGDYMNVQCH+
Sbjct: 1953 AQAQSGTGKTATFSISVLQCLDIQLRETQALILSPTRELATQIQKVMLALGDYMNVQCHS 1774
Query: 140 CIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKE 199
CIGGTN+GEDIRKLDYGQH+V+GTPGRVFDMI+RR+LRTR+IKM++LDEADEMLNKGFKE
Sbjct: 1773 CIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIKRRNLRTRSIKMMILDEADEMLNKGFKE 1594
Query: 200 QIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVE 259
QIYDVYRYLPPATQV+LISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVE
Sbjct: 1593 QIYDVYRYLPPATQVILISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVE 1414
Query: 260 REEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESI 319
REEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERE+I
Sbjct: 1413 REEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKEREAI 1234
Query: 320 MKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAIN 379
MK FR+G SRVLI+TDVWARG+DV QVSL+INYDLPNNRELYIHRIGRSGR+GRKGVAIN
Sbjct: 1233 MKVFRAGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAIN 1054
Query: 380 FVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
FVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 1053 FVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 958
>09316
Length = 2312
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 212/370 (57%), Gaps = 5/370 (1%)
Frame = +2
Query: 40 FDTMGLREDLLRGIYAYGFEKPSXXXXXXXXXXXXGRDVIAQSQSGTGKTATFSVSVLQC 99
F L+ +LLR I GFE PS DV+ Q++SG GKTA F ++ LQ
Sbjct: 851 FRDFLLKPELLRAIIDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQ 1030
Query: 100 LDIQVRETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGEDIRKLDYG-Q 157
L+ + L++A TRELA QI K YMN V+ GG +V +D L
Sbjct: 1031 LEPVDGQVSVLVMAHTRELAFQISKEYERFSKYMNNVKIAVFFGGMSVKKDEEVLSKNCP 1210
Query: 158 HVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQVVL 216
H+V GTPGR+ + + +L + IK +LDE D+ML + + + +++R P QV++
Sbjct: 1211 HIVVGTPGRLHALAKANNLNLKKIKHFILDECDKMLADLDMRRDVQEIFRLTPHEKQVMM 1390
Query: 217 ISATLPHEILEMTNKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 275
SATL EI + KFM DP+ + V D +LTL G++Q + ++ E K L +L D L
Sbjct: 1391 FSATLSKEIRPICKKFMQDPMEVYVDDDSKLTLHGLQQHYCKLKDNE-KNRKLFELLDVL 1567
Query: 276 TITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTD 335
Q +IF + + L++ + E NF ++H M Q+ER S ++F+ R+L++T+
Sbjct: 1568 EFNQVIIFVKSVPRCMALSQLLLEQNFPAIAIHRQMTQEERLSRYQQFKDFQKRILVATN 1747
Query: 336 VWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQ 394
++ RG+D+ +V+++ NYD+P + + Y+HR+ R+GR+G KG+AI FV + +D +IL D+++
Sbjct: 1748 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQE 1927
Query: 395 YYSTQIDEMP 404
+ I E+P
Sbjct: 1928 RFEVNITELP 1957
>07310
Length = 712
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 151/239 (63%)
Frame = +2
Query: 166 RVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEI 225
R+ D++ +R ++ +LVLDEAD++L++ FK + ++ +LPP Q++L SAT P +
Sbjct: 2 RILDLMNKRLVKPDTCGILVLDEADKLLSQDFKGMLDNIIAHLPPQRQILLYSATFPLSV 181
Query: 226 LEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCN 285
+ K++ +P I + +ELTL+G+ Q++ V+ E+ K L L+ L I Q++IFCN
Sbjct: 182 EQFMKKYLKNPYEINL-MEELTLKGVTQYYAFVQ-EKQKVHCLNTLFSKLQINQSIIFCN 355
Query: 286 TKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQ 345
+ ++V+ L +K+ E ++ +H M Q+ R + +FR G R L+ +D++ RG+D+
Sbjct: 356 STQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQA 535
Query: 346 VSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 404
V+++IN+D P + E Y+HRIGRSGRYG GVAIN + +D L IEQ T+I +P
Sbjct: 536 VNVVINFDFPKHAETYLHRIGRSGRYGHLGVAINLITFEDRFSLHKIEQELGTEIKPIP 712
>00621
Length = 2263
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 200/400 (50%), Gaps = 35/400 (8%)
Frame = +1
Query: 45 LREDLLRGIYAYGFEKPSXXXXXXXXXXXXGRDVIAQSQSGTGKTATFSVSVL------- 97
L D++ I G+++P+ RD+I +++G+GKTA F + +L
Sbjct: 274 LGADIMEVIDRVGYKEPTPIQMQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWIQSLP 453
Query: 98 --QCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
+ L+ + A+ILAPTRELA QI++ G+ + ++ + IGG + E KL
Sbjct: 454 KIERLEDADQGPYAVILAPTRELAQQIEEETRKFGEGLGIRVVSVIGGISREEQGFKLQQ 633
Query: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ-- 213
G VV TPGR+ D++ R L +V+DEAD M+N GF+ ++ + YLP + Q
Sbjct: 634 GCEVVIATPGRMIDVLENRYLVLNQCTYVVMDEADRMINMGFEPEVRKILDYLPVSNQKP 813
Query: 214 -----------------------VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEG 250
V+ +AT+P ++ + F+ P + + +E
Sbjct: 814 DNDDAEDDLKMLQNFKSKHKYRQTVMFTATMPPQVERLARTFLRRPTVVYIGNVGKPVER 993
Query: 251 IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD 310
++Q + E K L ++ + +IF N K+ D L + + + F +++HG
Sbjct: 994 VEQIVYMLTESE-KRKKLIEVLNAGVDPPIIIFVNQKKGADVLAKSLEKMGFNATTLHGG 1170
Query: 311 MPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGR 370
Q++RE + + GA ++++TDV RG+D+ VSL++NYD+ E Y HRIGR+GR
Sbjct: 1171KGQEQREYALASLKGGAKDIMVATDVAGRGIDIKDVSLVLNYDMARTIEDYTHRIGRTGR 1350
Query: 371 YGRKGVAINFVKNDDIRILRDIEQY-YSTQIDEMPMNVAD 409
G++G +I F+ +D + D++Q S+ + P +A+
Sbjct: 1351AGKEGTSITFLTKEDSMVFYDLKQLMLSSPVSTCPPELAN 1470
>02498
Length = 1955
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 131/207 (63%), Gaps = 7/207 (3%)
Frame = +3
Query: 204 VYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEW 263
V+R+L P+ V SA P DP+ I +KR+E +L+ IKQ+++ +E
Sbjct: 675 VFRHLRPSGDAVC-SAHHPQ-----------DPVIISLKREEESLDNIKQYYIDCNSQEE 818
Query: 264 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF 323
K+ LC++Y ++++ Q++IFC+ + WL E+M + V + G++ ++R +I+K F
Sbjct: 819 KYVALCNIYGSISVGQSMIFCHKRSTAAWLAERMTADHHAVGLLTGELTIEQRAAIIKRF 998
Query: 324 RSGASRVLISTDVWARGLDVPQVSLIINYDLPNNR------ELYIHRIGRSGRYGRKGVA 377
R G +VLI+T+V ARG+DV V++++N+DLP + E Y+HRIGR+GR+G+ G+A
Sbjct: 999 REGKEKVLITTNVSARGIDVEMVTVVVNFDLPVTQDWRPDCETYLHRIGRTGRFGKNGIA 1178
Query: 378 INFVKND-DIRILRDIEQYYSTQIDEM 403
IN V N + I+R IE+++ +I+++
Sbjct: 1179INMVDNSRSMAIMRSIEKHFGRKIEKL 1259
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 5/200 (2%)
Frame = +1
Query: 39 TFDTMGLREDLLRGIYAYGFEKPSXXXXXXXXXXXXGRDV--IAQSQSGTGKTATFSVSV 96
+F+ + L+ LL+G+Y GF PS V IAQSQSGTGKTA F +++
Sbjct: 136 SFEALNLKPQLLKGVYDMGFNAPSKIQETALPILLADPPVNMIAQSQSGTGKTAAFVLTM 315
Query: 97 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGEDIRKLDY 155
L +DI Q L LAPT ELA+QI + + + +M ++ + G V R
Sbjct: 316 LSRVDISQTFPQCLCLAPTYELALQIGEVIEKMSKHMTGLEIRYAVRGERVN---RGEVL 486
Query: 156 GQHVVAGTPGRVFDMIRR-RSLRTRAIKMLVLDEADEMLN-KGFKEQIYDVYRYLPPATQ 213
+ +V GTPG V D R ++L +++ VLDEAD M++ +G ++Q + + L Q
Sbjct: 487 SEQIVIGTPGTVMDWSHRFKALPLEKLRVFVLDEADVMISMQGHQDQSTRIQKRLSSGCQ 666
Query: 214 VVLISATLPHEILEMTNKFM 233
++L SAT +++ + +
Sbjct: 667 MLLFSATYDQVVMQFAQRII 726
>00739
Length = 1313
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 144/263 (54%), Gaps = 4/263 (1%)
Frame = +3
Query: 147 GEDIRKLDYGQHVVAGTPGRVFDMIRR-RSLRTRAIKMLVLDEADEMLNKGFKEQIYDVY 205
G+D L H+V TPGR+ D I + + +K LV+DEAD +L+ F Q+ +
Sbjct: 21 GQD---LAVKPHIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDDNFGAQLEPIL 191
Query: 206 RYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVE---REE 262
LP A Q +L SATL + + + + P + + + T++ +++ +V V ++
Sbjct: 192 TRLPSARQTLLFSATLSPTVNALRDSVLNKPFVWIQQSERATVDELQEDYVLVPASMKDA 371
Query: 263 WKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE 322
+ L + +IF T + L + + F+ + +H +PQ+ R S +
Sbjct: 372 YMVHILDHWLKDHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFRLSSLSR 551
Query: 323 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVK 382
F+S +R+LISTDV +RGLD+P V LIIN+++PN Y+HR+GR+ R GR G +I+ V
Sbjct: 552 FKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDYVHRVGRTARAGRCGQSISLVT 731
Query: 383 NDDIRILRDIEQYYSTQIDEMPM 405
DI++++ IE + + Q+ E P+
Sbjct: 732 EFDIKLIKSIESHINCQMTEHPV 800
>01517
Length = 2605
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 134/243 (55%), Gaps = 7/243 (2%)
Frame = +2
Query: 169 DMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR--YLPPATQ--VVLISATLPHE 224
DM+ R + LVLDEAD ML+ GF+ QI + +PP Q ++ SAT P E
Sbjct: 5 DMMERGKIGMDHCNYLVLDEADRMLDMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPKE 184
Query: 225 ILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY---DTLTITQAV 281
I + F+ + I + V R T E I Q V VE E K L DL T + +
Sbjct: 185 IQLLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEPE-KRSFLLDLLMASGTGPESLTL 361
Query: 282 IFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGL 341
+F TK+ D L + + N+ +S+HGD Q+ERE ++ F++G +L++T V ARGL
Sbjct: 362 VFVETKKGADSLEQFLMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVAARGL 541
Query: 342 DVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQID 401
D+P V +IN+DLP++ E Y+HRIGR+GR G G+A +F + + I RD+ +
Sbjct: 542 DIPNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNIARDMLDLLTEANQ 721
Query: 402 EMP 404
E+P
Sbjct: 722 EVP 730
>19640
Length = 456
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = -1
Query: 282 IFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGL 341
IFCNT+RKVD LT++M NFTVS+MHGDM Q++RE IMK+FRSG+SRVLI+TD+ ARG+
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 342 DVPQVSLIINYDLPNNRELYIHRIGRSG 369
DV QVSL+INYDLP+NRE YIHRIGR G
Sbjct: 276 DVQQVSLVINYDLPSNRENYIHRIGRGG 193
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = -3
Query: 358 RELYIHRIGRS-GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
REL H RS R+GRKGVAINF+ +DD RIL+DIEQ+Y T I+EMP N+ADLI
Sbjct: 226 REL--HS*NRSRWRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 68
>02054
Length = 1110
Score = 111 bits (277), Expect(2) = 2e-34, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 96/172 (55%)
Frame = -3
Query: 233 MTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDW 292
+ DP+++ V T++ ++Q ++ + ++K L + + L ++FC+T
Sbjct: 769 LRDPVKVEVSNKYQTVDTLQQSYLFIP-AKYKDAYLVSILNELAGNSFMVFCSTCANTQR 593
Query: 293 LTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINY 352
+ +R FT +HG M Q +R + +F+S +LI+TDV +RGLD+P V +++N
Sbjct: 592 VALLLRNLGFTAIPLHGQMSQAKRLGSLNKFKSKDRSILIATDVASRGLDIPHVDVVLNL 413
Query: 353 DLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 404
D+P + + Y+HR+GR+ R GR G AI FV D+ + + IE ++ E P
Sbjct: 412 DIPTHSKDYMHRVGRTARAGRSGRAITFVSQYDVELYQRIEHLIGKKLSEYP 257
Score = 52.8 bits (125), Expect(2) = 2e-34, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = -2
Query: 158 HVVAGTPGRVFDMIRR-RSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 216
H++ TPGR+ D + + RA+K LV+DEAD +L+ F++++ + + +P L
Sbjct: 998 HIIIATPGRLVDHLENTKGFSLRALKFLVMDEADRILDMNFQDEVDKILKVIPRERNTYL 819
Query: 217 ISATLPHEILEMTNKFMTDP 236
SAT+ +++ + T P
Sbjct: 818 FSATMTNKVAKTTASITEGP 759
>09327
Length = 1087
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Frame = +2
Query: 111 ILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDM 170
+L PTRELA Q+Q+ + G V+ GG G +R+LD G + TPGR+ D
Sbjct: 20 LLVPTRELAQQVQEVAVEFGHSSRVRSVCVYGGAQRGPQLRELDRGAEICIATPGRLIDF 199
Query: 171 IRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTN 230
+ R LVLDEAD ML+ GF+ QI + + P Q ++ SAT P E+ ++
Sbjct: 200 LESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRKLAE 379
Query: 231 KFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI---TQAVIFCNTK 287
F+ + +I + +LT + V + K + L L + + + +IF TK
Sbjct: 380 DFIMEYTQINIGALQLTANHNILQIIDVCMDHEKEEKLVKLLNEIMQEKENRTLIFVETK 559
Query: 288 RKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGL 341
RK D + +M+ + V +HGD Q+ER+ ++ +FR+G VL++TDV +RGL
Sbjct: 560 RKCDDIHRRMKRDGWPVLCIHGDKSQQERDWVLNDFRNGRCPVLLATDVASRGL 721
>00162
Length = 2322
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 6/277 (2%)
Frame = +3
Query: 108 QALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRV 167
+ALI+ PTRELA QI + L + + + + IGG + + + ++V T GR+
Sbjct: 141 EALIITPTRELAFQIYEVLNKIRTFHDFSANLVIGGKFMWRETHLMG-KTNIVICTVGRL 317
Query: 168 FDMIRR-RSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEIL 226
+ ++ +K+LVLDEAD +++ F + + + +LPP Q +L SAT +
Sbjct: 318 LHHLESTQAFDVSELKVLVLDEADRIMDSKFAQDMDSIMSHLPP-RQTLLFSATQTMSVK 494
Query: 227 EMTNKFMTDPIRILVKR--DELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIF- 283
+ + DP + V R + +T G++Q ++ E E K L + ++F
Sbjct: 495 TLARLSLKDPSYVSVDRHAEYVTPTGLEQSYIVCELHE-KLSLLYSFLKNHPNNKIMVFL 671
Query: 284 --CNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGL 341
C R V + ++ R +V +HG +PQ R I +EF +LI+TD+ RGL
Sbjct: 672 QTCKQARYVHTVIKRERPG-MSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGL 848
Query: 342 DVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAI 378
D P V+ +I D P + YIHR GR+ R+ G A+
Sbjct: 849 DFPAVNWVIQLDCPVDVNTYIHRAGRTARFECNGQAL 959
>34295
Length = 694
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = -1
Query: 277 ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDV 336
I +IF NTK+ L+ + +HG M QKER S + F+S R LI+TDV
Sbjct: 544 IPNVMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLIATDV 365
Query: 337 WARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVK-NDDIRILRDIEQY 395
ARGLD+P V L+IN+ LP + YIHR+GR+ R GRKGVAI+ + D+ +L IE+
Sbjct: 364 AARGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGVAISIFRFPRDLELLGAIEEE 185
Query: 396 YSTQIDEMPMN 406
+T++ E P++
Sbjct: 184 INTKLTEHPID 152
>00617
Length = 1505
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 75/110 (68%)
Frame = -3
Query: 302 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 361
F+ + +H +PQ+ R S + F+S +R+LISTDV +RGLD+P V LIIN+++PN Y
Sbjct: 1482 FSCAVLHSMIPQRFRLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDY 1303
Query: 362 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
+HR+GR+ R GR G +I+ V DI++++ IE + + Q+ E P+ +++
Sbjct: 1302 VHRVGRTARAGRCGQSISLVTEFDIKLIKSIESHINCQMTEHPVKEKEVL 1153
>04883
Length = 1155
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 8/260 (3%)
Frame = +3
Query: 39 TFDTMGLREDLLRGIYAYGFEKPSXXXXXXXXXXXXGRDVIAQSQSGTGKTATFSVSVLQ 98
TF + + ++ + + P+ G+D++ +Q+G+GKT F + +
Sbjct: 363 TFTEVNFPDYVMNQVRRNSWTAPTPIQSQSWPVAMAGKDLVGIAQTGSGKTLAFMLPAIV 542
Query: 99 CLDIQV---RETQALILA--PTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKL 153
++ Q R ++LA PTRELA Q+Q+ G V+ GG G +R L
Sbjct: 543 HINHQAYLERGDGPIVLALVPTRELAQQVQEVAQEFGHASRVRSVCVYGGAPRGPQLRDL 722
Query: 154 DYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 213
+ G + TPGR+ D + R LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 723 ERGAEICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 902
Query: 214 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 273
++ SAT P E+ ++ F+ + +++ + ELT + V E K D L L +
Sbjct: 903 TLMWSATWPKEVRKLAEDFIDEYVQVNIGALELTANHNILQIIDVCMEHEKEDKLVKLLN 1082
Query: 274 TLTITQAVI---FCNTKRKV 290
+ + FC + K+
Sbjct: 1083EIMTRKKRTKPSFCGDQEKM 1142
>31899
Length = 453
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = -1
Query: 30 TSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSXXXXXXXXXXXXGRDVIAQSQSGTGKT 89
TSE VD F ++ L + +L G+ GFE+PS G D+I Q++SGTGKT
Sbjct: 357 TSESVD----FASLLLSKPVLNGLKNAGFERPSPIQLKAIPLGRCGLDLIVQAKSGTGKT 190
Query: 90 ATFSVSVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGE 148
FSV L+ ++ R TQ L+LAPTRE+A+QI + + ++G M+ +QCH IGG V E
Sbjct: 189 CVFSVVALEGIETTARSTQVLVLAPTREIALQIWEVINSIGSAMSGLQCHTFIGGLPVHE 10
Query: 149 D 149
D
Sbjct: 9 D 7
>14337
Length = 693
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%)
Frame = +2
Query: 261 EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIM 320
E K + +L+ ++F +K++ L + V ++H D PQ ER++ +
Sbjct: 8 EAGKLMAMRNLFTEGITPPVLVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDATV 187
Query: 321 KEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINF 380
+ F G VL+ T++ RG+D ++L+INYD P N YIHRIGR+GR G G AI F
Sbjct: 188 RAFTEGRVWVLVCTELMGRGIDFKGINLVINYDFPTNAVSYIHRIGRTGRAGVPGRAITF 367
Query: 381 VKNDDIRILRDIEQYYSTQIDEMP 404
D+ LR I E+P
Sbjct: 368 FTEQDVTHLRSIANIIKEAGCEVP 439
>08036
Length = 1226
Score = 61.6 bits (148), Expect(2) = 8e-19, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Frame = +1
Query: 160 VAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 219
V GTP R+ +R L ++MLV+DEAD + + G + + + LP Q L+SA
Sbjct: 1 VVGTPSRILAHLRAGHLELHTVQMLVVDEADLVFSFGHEADMKKLMEELPRIYQAFLMSA 180
Query: 220 TLPHEILEMTNKFMTDPIRILVKRDELTLEG-IKQFFVAVEREEWKFDTLCDLYDT-LTI 277
TL ++ + + +P+ + +K +L + Q+ V E ++ KF + + L
Sbjct: 181 TLSEDVKALKKMVLHNPVILKLKESQLPESTQLTQYHVKCEVDD-KFTLMVAVLKLGLVR 357
Query: 278 TQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTD 335
++++F N+ L + ++ ++P K R I+ +F G ++I++D
Sbjct: 358 GKSILFVNSVDSCYKLKLFLEPFGIPACVLNSELPVKSRCHIVSQFNEGLYDIIIASD 531
Score = 50.1 bits (118), Expect(2) = 8e-19, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +3
Query: 338 ARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYS 397
ARG+D VS +IN++ P + YIHR+GR+ R ++G A++ + + +E+
Sbjct: 612 ARGIDFQNVSNVINFEFPKTVDAYIHRVGRTARGDKQGCALSLISRHENDQFEAVEEAQK 791
Query: 398 TQID 401
T D
Sbjct: 792 TDKD 803
>11160
Length = 646
Score = 78.6 bits (192), Expect(2) = 4e-18, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 16/189 (8%)
Frame = -1
Query: 142 GGTNVGEDIRK-LDYGQHVVAGTPGRVFDMIRRR------SLRTRAIKMLVLDEADEMLN 194
GG + DI K + G ++ TPGR+ D+ R+ + +A+++LVLDEAD +L+
Sbjct: 646 GGVSCSHDISKFMKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLLD 467
Query: 195 KGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEG---- 250
GF+ I + +LP + L SAT E+ + + +P+R+ VK +L E
Sbjct: 466 MGFEASINTILGHLPKLRRTGLFSATQTDEVENLIRAGLRNPLRVTVKEKKLAGEADQRT 287
Query: 251 ---IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE--ANFTVS 305
+ +++ VE EE KF L T + ++F +T VD+ + + + + V
Sbjct: 286 PSTLSNYYMIVEAEE-KFSQLVKFLKTHHRDKLLLFFSTCACVDYFSMCLTQLLKHMQVL 110
Query: 306 SMHGDMPQK 314
S+H M QK
Sbjct: 109 SIHSKMKQK 83
Score = 30.4 bits (67), Expect(2) = 4e-18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 313 QKERESIMKEFRSGASRVLISTDVWARGLD 342
+ E + + +FRS S +L+ TDV ARG+D
Sbjct: 92 EAEEKPVFAKFRSITSGLLVCTDVMARGVD 3
>12995
Length = 1072
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 68/126 (53%)
Frame = +3
Query: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340
V+F TK V++L + + + ++ + Q R+ + +F +V++ TD+ ARG
Sbjct: 141 VVFVATKHHVEYLNTLLTKCGIACTYIYSSLDQTARKIHVAKFTHKQVKVMLVTDLAARG 320
Query: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQI 400
+D+PQ+ ++N+ P +L++HR+GR R GR G A + V D++ L D+ + +
Sbjct: 321 IDIPQLDNVVNFHFPAKAKLFVHRVGRVARAGRSGTAYSLVAMDEVAHLVDLHVFLGRPL 500
Query: 401 DEMPMN 406
P +
Sbjct: 501 KTAPQS 518
>22006
Length = 3414
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +2
Query: 75 GRDVIAQSQSGTGKTATFSVSVLQCLDIQV-RETQALILAPTRELAVQIQKGLLALGDYM 133
G+D++A +++G+GKTA F V +L+ L + + +ALIL+PTRELA+Q K LG ++
Sbjct: 3047 GKDMVAMARTGSGKTAAFLVPMLERLKMHSSKGARALILSPTRELALQTLKFTKELGKFL 3226
Query: 134 NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEML 193
+++ +GG + + L ++ TPGR+ ++ + + +V DEAD +
Sbjct: 3227 DLRAAVILGGDRMEDQFSALHQNPDIIIATPGRLLHVLVEMKKSLKEVIYVVFDEADRLF 3406
Query: 194 N 194
Sbjct: 3407 E 3409
>19151
Length = 625
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 7/88 (7%)
Frame = -3
Query: 329 RVLISTDVWARGLDVPQVSLIINYDLP------NNRELYIHRIGRSGRYGRKGVAINFVK 382
+VLI+T+V +RG+D+ QV++++N+DLP + E Y+HRIGR+GR+G+ G+AIN +
Sbjct: 623 KVLITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIAINLID 444
Query: 383 ND-DIRILRDIEQYYSTQIDEMPMNVAD 409
+ + + R IE+++ I + + AD
Sbjct: 443 GEKSMNVCRAIEKHFQKDIVYLNTDNAD 360
>19525
Length = 585
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Frame = +2
Query: 107 TQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGR 166
T+ L+L PTRELAVQ+ + + Y + GG ++ L +V TPGR
Sbjct: 14 TRVLVLVPTRELAVQVYQVGQQISQYTKISICLAAGGLDIKGQEAALRLCPDIVVATPGR 193
Query: 167 VFDMIRRRSLRTRA-IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEI 225
+ D + T A +++LVLDEAD ML++ F Q+ ++ R Q +L SAT+ +
Sbjct: 194 LIDHLHNAPNFTIAHVEILVLDEADRMLDEYFAAQMTEIIRMCNFQRQTMLFSATMSDAV 373
Query: 226 LEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
++ + + + +++ V ++ G++Q FV + RE + D
Sbjct: 374 QDLASVSLKEAVKVFVNQNTDIALGLQQEFVRI-RENKEGD 493
>11624
Length = 2257
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Frame = -1
Query: 247 TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR-EANFTVS 305
T EG+ ++ V + E L L++ L + F N+ L ++ +V
Sbjct: 991 TPEGLTEYIVESDSSEKPLLVLHFLHN-LKFRSVLCFTNSVETTHRLCLLVKLYGGLSVK 815
Query: 306 SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 365
+P + R+ I+K+F G +L+ +D ARG+DV V +I+YD P + YIHR+
Sbjct: 814 EFSSRLPGERRKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNPPYIKTYIHRV 635
Query: 366 GRSGRYGRKGVAINFVKNDDI 386
GR+ R GR G AI+ ++ +
Sbjct: 634 GRTARAGRAGTAISLLEKKEF 572
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Frame = -3
Query: 76 RDVIAQSQSGTGKTATFSVSVLQCLDIQ-VRETQALILAPTRELAVQIQKGLLALGDYMN 134
RD+ + +G+GKT +++ ++QCL + V +A+I+ P R+LA Q+ +
Sbjct: 1814 RDICVSAPTGSGKTLAYTLPIIQCLKQRMVPHVRAVIVLPVRDLAEQVYQ---------- 1665
Query: 135 VQCHAC----------IGGT--NVGED-IRKLDYGQ------HVVAGTPGRVFDMIRRR- 174
V CH C +G T NV +D + K YG ++ TPGR+ D I
Sbjct: 1664 VFCHYCADTPLKVGIVVGKTVFNVEQDTLVKKRYGGVYHSVIDILVATPGRLVDHINSTP 1485
Query: 175 SLRTRAIKMLVLDEADEML 193
++ LV+DEAD M+
Sbjct: 1484 GFDLSHLRFLVIDEADRMM 1428
>10649
Length = 472
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = +1
Query: 294 TEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYD 353
+++ R A +V +HG +PQ R I +EF +LI+TD+ RGLD P V+ +I D
Sbjct: 43 SDQARAAGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLD 222
Query: 354 LPNNRELYIHRIGRSGRYGRKGVAI 378
P + YIHR GR+ R+ G A+
Sbjct: 223 CPVDVNTYIHRAGRTARFECNGQAL 297
>33025
Length = 558
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVY--RYLPPAT- 212
G ++V GTPGR+ D I +++ + L+LDEAD ML+ GF+ +I + +PP T
Sbjct: 105 GANLVVGTPGRLLDFIGDQTISLGKCQYLILDEADRMLDMGFEPEIRKLVDTHGMPPKTQ 284
Query: 213 -QVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 271
Q ++ SAT +I + F+ D + I V + Q F+ V+R + K D LC++
Sbjct: 285 RQTLMFSATFKEDIQRLAGDFLNDYLFITVGIVGGACSDVTQTFLEVDRLQ-KRDHLCEI 461
Query: 272 YDTLTITQAVIFC 284
+ + ++V C
Sbjct: 462 LNEMGTAKSVGVC 500
>19172
Length = 484
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = -1
Query: 278 TQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVW 337
T+ +IF TK++VD +T + + ++HGD Q+ER+ ++ FR+G +L++TDV
Sbjct: 334 TKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVA 155
Query: 338 ARGL 341
ARGL
Sbjct: 154 ARGL 143
>39583
Length = 234
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = -3
Query: 303 TVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYI 362
TV S +R +K F+ G VL++TD+ +RGLD+ V +IN+ +P+ + Y+
Sbjct: 211 TVESCMATCR*AQRLEALKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTLKHYV 32
Query: 363 HRIGRSGRYG 372
HR+GR+ R G
Sbjct: 31 HRVGRTARAG 2
>17708
Length = 882
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Frame = +1
Query: 76 RDVIAQSQSGTGKTATFSVSVLQC---LDIQVRE-TQALILAPTRELAVQIQKGLLALGD 131
RD++ +++G+GKT F + ++ L R T +I++PTREL++Q L L
Sbjct: 553 RDLMGAAKTGSGKTLAFLIPAIELMYKLKFMPRNGTGCIIISPTRELSMQTFNVLTELLK 732
Query: 132 YMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIR 172
Y + +GG N ++++KL G +++ TPGR+ D ++
Sbjct: 733 YHHHTFGLIMGGVNRHDEVKKLKKGVNIIVATPGRLLDHLQ 855
>17544
Length = 1047
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Frame = +2
Query: 24 TKVEFETSEEVDVTPT----------FDTMGLREDLLRGIYAYGFEKPSXXXXXXXXXXX 73
T + F+ E++ V T F+ L E + I + KP+
Sbjct: 560 TGINFDKYEDIPVEATGDSPPPHINSFEECTLGEIIRNNIVLSKYNKPTPVQKFALPIVL 739
Query: 74 XGRDVIAQSQSGTGKTATFSVSVLQCL--------DIQVRETQ---------ALILAPTR 116
RD++A +Q+G+GKTA F + +L + +Q +++ ALILAPTR
Sbjct: 740 GKRDLMACAQTGSGKTAAFLLPILNQVYENGPTPEALQQNQSRGYRRKMYPIALILAPTR 919
Query: 117 ELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 158
ELA QI ++ GG ++G +R LD G H
Sbjct: 920 ELASQIYDEARKFAYRSRLRPCVVYGGADIGAQMRDLDKGCH 1045
>33083
Length = 1931
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 339 RGLDVPQVSLIINYDLPNNRELYIHRIGRSGR-YGRKGVAINFVKNDDIRILRDIEQYYS 397
RGLD+PQV I+ YD P+ + YIHR+GR+ R G G A+ ++ +++ L+ +
Sbjct: 1 RGLDIPQVDWIVQYDPPDESKEYIHRVGRTARGEGSSGKALLLLQPEELGFLKFLRA-AK 177
Query: 398 TQIDEMPMN 406
++ EM N
Sbjct: 178 VKVQEMDFN 204
>03381
Length = 1206
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +3
Query: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 385
LD+P + ++NYD+ + + + HR+GR+GR G KG A + + D
Sbjct: 3 LDIPHIRTVVNYDVARDIDTHTHRVGRTGRAGEKGSAYTLITDKD 137
>33543
Length = 471
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +3
Query: 361 YIHRIGRSGRYGRKGVAINFVKND-DIRILRDIEQYYSTQIDEMPMNVA 408
Y+HR+GR+GR+G +G+AI FV N+ + +L +++ + + ++P ++
Sbjct: 6 YLHRVGRAGRFGTRGLAITFVSNETEADVLNSVQERFEVSVTDLPEQIS 152
>31781
Length = 416
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 35/50 (70%)
Frame = -2
Query: 235 DPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFC 284
+P+ I ++R+E +L+ I+Q+++ K+ LC++Y ++++ Q++IFC
Sbjct: 277 NPVTIRLRREEESLDNIQQYYIRCRTLSDKYRALCNIYGSISVGQSMIFC 128
>30136
Length = 524
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Frame = +2
Query: 40 FDTMGLREDLLRGIYAYGFEKPSXXXXXXXXXXXXGRDVIAQSQSGTGKTATFSVSVLQC 99
F L + +++ I G++ P+ G + + +++G+GKT + + +
Sbjct: 137 FAEAYLPDYVIKEIRRQGYKSPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYILPAIVH 316
Query: 100 LDIQVRETQ-----ALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLD 154
++ Q + AL+LAPTRELA QIQ+ G V+ GG G +R L
Sbjct: 317 INNQQPLQRGEGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQ 496
Query: 155 YGQHVVAGT 163
G +V T
Sbjct: 497 RGCEIVIAT 523
>31220
Length = 818
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%)
Frame = +2
Query: 314 KERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGR 373
K+R+S + S ASR G+D V+ +IN+D P + YIHR GR+ R
Sbjct: 122 KQRKSKHTDHESSASR----------GIDFQGVNNVINFDFPLDVTSYIHRAGRTARGNN 271
Query: 374 KGVAINFVKNDDIRILRDIEQYYSTQIDEMPM 405
G ++FV ++ I + +E+ + P+
Sbjct: 272 TGSVLSFVSVKELPINQAVEEKLRSCFGREPL 367
>06438
Length = 989
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 332 ISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAI 378
++ + RGLD P V+ +I D P + YIHR GR+ R+ G A+
Sbjct: 25 LTVTLACRGLDFPAVNWVIQLDCPVDVNTYIHRAGRTARFECNGQAL 165
>11423
Length = 1434
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = -2
Query: 345 QVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI----RILRDIEQYYSTQI 400
Q +I+YD P + YIHR+GR+ R GR G AI+ ++ + +++R+ ++ +I
Sbjct: 1403 QRKYVISYDNPPYIKTYIHRVGRTARAGRAGTAISLLEKKEFFHFKQMMREAGKW--KKI 1230
Query: 401 DEMPMNVADL 410
EM + L
Sbjct: 1229 KEMKLGRQAL 1200
>12121
Length = 465
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 159 VVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGF 197
+ TPGR+ D + R LVLDEAD ML+ GF
Sbjct: 463 ICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGF 347
>08819
Length = 597
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER 260
H +++ +K T I ++VKR++ L +KQF V VE
Sbjct: 336 HLFVQINDKSFTPQIYLMVKRNKQVL*FVKQFVVTVEH 449
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|21450277|ref|NP_659149.1| Na+/K+ -ATPase alpha 1
subunit [Mus musculus]
(1023 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00499 1074 0.0
14773 379 e-105
06342 313 3e-85
28890 288 6e-78
08160 208 7e-54
36566 120 2e-27
03937 118 1e-26
12151 88 3e-25
33697 76 7e-23
17925 90 4e-18
29829 70 4e-12
13525 68 2e-11
04985 59 1e-08
14321 49 8e-06
21541 40 2e-04
07486 38 0.021
05368 33 0.85
17101 31 2.9
23730 29 9.2
>00499
Length = 4026
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/675 (75%), Positives = 583/675 (86%)
Frame = +2
Query: 349 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG 408
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD +I EADT+++QS
Sbjct: 44 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDGRIVEADTSDDQSN 223
Query: 409 VSFDKTSATWFALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIEVCCGSVM 468
++ ++ TW ALSR+A LCNRA F+ NQ+N+PILKR GDASESALLKC+E+ G V
Sbjct: 224 ATYSRSDPTWMALSRVAMLCNRAEFKGNQDNVPILKRECNGDASESALLKCVELSIGHVT 403
Query: 469 EMREKYSKIVEIPFNSTNKYQLSIHKNPNASEPKHLLVMKGAPERILDRCSSILLHGKEQ 528
E R + KIVEIPFNS+NKYQ+SIH+ + +P++LLVMKGAPERI+DRCS+ILL+GKEQ
Sbjct: 404 EYRRRNEKIVEIPFNSSNKYQVSIHETEDPDDPRYLLVMKGAPERIMDRCSTILLNGKEQ 583
Query: 529 PLDEELKDAFQNAYXXXXXXXXXXXXFCHLLLPDEQFPEGFQFDTDDVNFPVDNLCFVGL 588
PLD+ ++AF AY FC LP +QFP G++FD + NFP+ L FVGL
Sbjct: 584 PLDDNFREAFNAAYLELGGLGERVLGFCDYFLPVDQFPPGYEFDPEGPNFPITGLRFVGL 763
Query: 589 ISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARL 648
++MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA+GVGIISEG++TVEDIA+
Sbjct: 764 MAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIARGVGIISEGSKTVEDIASER 943
Query: 649 NIPVNQVNPRDAKACVVHGSDLKDMTSEELDDILRYHTEIVFARTSPQQKLIIVEGCQRQ 708
IPV +V+PR+AKA V+HG DL+DMT ++D+ILR H+EIVFARTSPQQKLIIVEGCQRQ
Sbjct: 944 GIPVEEVDPREAKAAVIHGGDLRDMTPAQIDEILRNHSEIVFARTSPQQKLIIVEGCQRQ 1123
Query: 709 GAIVAVTGDGVNDSPALKKADIGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEEGRLI 768
G IVAVTGDGVNDSPALKKADIGVAMGI GSDVSKQAADMILLDDNFASIVTGVEEGRLI
Sbjct: 1124 GQIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLI 1303
Query: 769 FDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAE 828
FDNLKKSIAYTLTSNIPEI+PFL+FI+A+IPLPLGT+TILCIDLGTDMVPAISLAYE+AE
Sbjct: 1304 FDNLKKSIAYTLTSNIPEISPFLLFILADIPLPLGTITILCIDLGTDMVPAISLAYEKAE 1483
Query: 829 SDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPFHLLGIRE 888
+DIMKRQPR+P DKLVNERLISMAYGQIGMIQA GFFTYFVI+ ENGF LLGIR
Sbjct: 1484 NDIMKRQPRDPVKDKLVNERLISMAYGQIGMIQASAGFFTYFVIMGENGFWYDRLLGIRM 1663
Query: 889 TWDDRWVNDVEDSYGQQWTYEQRKIVEFTCHTAFFVSIVVVQWADLVICKTRRNSVFQQG 948
WD R VND+EDSYGQ+WTY QRK +E+TCHTAFFVSIV+VQWAD++ICKTRR S+FQQG
Sbjct: 1664 EWDSRGVNDLEDSYGQEWTYSQRKKLEYTCHTAFFVSIVIVQWADIIICKTRRLSLFQQG 1843
Query: 949 MKNKILIFGLFEETALAAFLSYCPGMGAALRMYPLKPTWWFCAFPYSLLIFVYDEVRKLI 1008
MKNK LIFG+F ETALAAFL YCPG+ LRMYPL+ TWWF A P+SL IF+YDE RKLI
Sbjct: 1844 MKNKHLIFGIFFETALAAFLCYCPGLDKGLRMYPLRLTWWFTAVPFSLTIFIYDECRKLI 2023
Query: 1009 IRRRPGGWVEKETYY 1023
+RR PGG+VE+ETYY
Sbjct: 2024 LRRNPGGFVERETYY 2068
>14773
Length = 794
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/265 (67%), Positives = 214/265 (80%)
Frame = +2
Query: 739 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI 798
SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI+PFL++I+
Sbjct: 2 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGT 181
Query: 799 PLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIG 858
PLPLG +TIL IDLGTDMVPAISLAYE AESDIMKR PR +D+LVNERLI+M+YGQIG
Sbjct: 182 PLPLGVITILFIDLGTDMVPAISLAYEMAESDIMKRPPRT-ISDRLVNERLIAMSYGQIG 358
Query: 859 MIQALGGFFTYFVILAENGFLPFHLLGIRETWDDRWVNDVEDSYGQQWTYEQRKIVEFTC 918
M+QAL GF+ + ++ ++GF+ L GIR WD +ND+EDSYGQ WT QR VE +
Sbjct: 359 MMQALAGFYAWILVFGQSGFMVRDLPGIRSFWDSANINDLEDSYGQNWTKAQRMDVELSG 538
Query: 919 HTAFFVSIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGAAL 978
+T FF++IV+VQW+D++ICKTRR SVF QGM N +L FG+F ET+LA LSY PG+ AL
Sbjct: 539 YTVFFITIVLVQWSDIIICKTRRLSVFHQGMSNHVLTFGIFFETSLAVLLSYTPGVDVAL 718
Query: 979 RMYPLKPTWWFCAFPYSLLIFVYDE 1003
R PL+ WW A P+ +LIFVYDE
Sbjct: 719 RTRPLRFEWWLAAIPFQVLIFVYDE 793
>06342
Length = 2428
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 229/720 (31%), Positives = 365/720 (50%), Gaps = 64/720 (8%)
Frame = +2
Query: 185 VVVGDLVEVKGGDRIPADLRI--ISANGCKVDNSSLTGESEPQTRS----PDFTNENPLE 238
+V GD+VEV GD++PAD+RI I + ++D + LTGES + PD N +
Sbjct: 5 LVPGDIVEVSVGDKVPADIRILKIHSTTLRIDQAILTGESVSVMKHTDPIPDPRAVNQ-D 181
Query: 239 TRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAEEIEHFIHLITGV 298
+N+ F TN G +G+V+ TG T +G+I E +TP+ ++++ F + ++ V
Sbjct: 182 KKNLLFSGTNVAAGKCKGLVIGTGLTTEIGKIRNEMMDTEQEKTPLQQKLDEFSNQLSKV 361
Query: 299 AVFLGVSFFILSL------ILEYTWLEAVIFLIGIIVANV----PEGXXXXXXXXXXXXX 348
+ ++ + +++ +W++ I+ I VA PEG
Sbjct: 362 ITIICIAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGT 541
Query: 349 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG 408
+RMA+KN +V++L +VETLG TS ICSDKTGTLT N+M+V ++ +QI DT + ++
Sbjct: 542 RRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKLFIFSQI---DTNQIKT- 709
Query: 409 VSFDKTSATWFA---------------------LSRIAGLCNRAVFQANQENLPILKRAV 447
F+ T +T+ L I G+CN + N+ K
Sbjct: 710 TQFEVTGSTYAPDGELYQNGKKVKASDYPGLEELCTICGMCNDSSVDYNEAKTQYEK--- 880
Query: 448 AGDASESALLKCIE-------------------VCCGSVMEMREKYSKIVEIPFNSTNKY 488
G+A+E+AL E VC + +M + K + F S ++
Sbjct: 881 VGEATETALTVLAEKLNFYNTDKSSLNKREMGTVCNHVIQDM---WRKEFTLEF-SRDRK 1048
Query: 489 QLSIHKNPNASEPKHL-----LVMKGAPERILDRCSSILLHGKEQPLDEELKDAFQNAYX 543
+S+ PN +P + + KGAPE +LDRC+ + + + P+ +K+
Sbjct: 1049SMSVFCVPN--KPTRVPGGARMFAKGAPEGLLDRCTHVRIGNNKVPMSPAIKNEIMK--L 1216
Query: 544 XXXXXXXXXXXFCHLLLPDEQFPEGFQFDTDDVNFPVD---NLCFVGLISMIDPPRAAVP 600
C L + P D +D ++ N+ FVG++ M+DPPR V
Sbjct: 1217TKIYGTGRDTLRCLALATIDNPPRREDMDLEDSRKFIEYETNMTFVGVVGMLDPPREEVM 1396
Query: 601 DAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVNQVNPRDA 660
++ CR+AGI+VI++TGD+ TA+AI + +G+ SE +E E +A +++ P D
Sbjct: 1397ASIKNCRAAGIRVIVITGDNKATAEAICRRIGVFSE-SENTEGLA-YTGREFDELPPEDQ 1570
Query: 661 KACVVHGSDLKDMTSEELDDILRYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVN 720
+A V+ +FAR P K IVE Q +G I A+TGDGVN
Sbjct: 1571RAAVMRAR--------------------LFARVEPAHKSKIVEYLQAEGEISAMTGDGVN 1690
Query: 721 DSPALKKADIGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTL 780
D+PALKKA+IG+AMG G+ V+K A++M+L DDNF++IV VEEGR I++N+K+ I Y +
Sbjct: 1691DAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 1867
Query: 781 TSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPK 840
+SNI E+ + IP L V +L ++L TD PA +L + + DIM++ PRNP+
Sbjct: 1868SSNIGEVVCIFLTAALGIPEALIPVQLLWVNLVTDGFPATALGFNPPDLDIMQKPPRNPR 2047
>28890
Length = 552
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 162/183 (88%)
Frame = -3
Query: 142 ITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEDVVVGDLVEVKGGDRIPA 201
+TG FSYYQEAKSSKIM+SFKN+VPQ A+V+R +K+S+ AE++VVGD+VE K GDR+PA
Sbjct: 550 VTGVFSYYQEAKSSKIMDSFKNLVPQFAVVVRGDQKLSVKAEELVVGDIVECKFGDRVPA 371
Query: 202 DLRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYT 261
DLR+ISA+G KVDNSSLTGESEPQ+RS +FT+ENPLETRNI FFSTN VEGT RGIV+ T
Sbjct: 370 DLRVISAHGFKVDNSSLTGESEPQSRSAEFTHENPLETRNICFFSTNAVEGTCRGIVIKT 191
Query: 262 GDRTVMGRIATLASGLEGGQTPIAEEIEHFIHLITGVAVFLGVSFFILSLILEYTWLEAV 321
GD TVMGRIA LASGLE G TPIA+EI HFIH+ITGVAVFLGVSFF+++ IL Y WL+AV
Sbjct: 190 GDDTVMGRIANLASGLEVGDTPIAKEIAHFIHIITGVAVFLGVSFFVIAFILGYFWLDAV 11
Query: 322 IFL 324
IFL
Sbjct: 10 IFL 2
>08160
Length = 459
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 114/138 (82%)
Frame = +2
Query: 349 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG 408
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD +I EADT+++QS
Sbjct: 44 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDGRIVEADTSDDQSN 223
Query: 409 VSFDKTSATWFALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIEVCCGSVM 468
++ +T TW AL+R+ LCNRA F+ NQ+N+PILKR GDASESALLK +E+ G V
Sbjct: 224 ATYSRTDVTWMALARVGMLCNRAEFKGNQDNVPILKRECNGDASESALLKAVELSIGQVT 403
Query: 469 EMREKYSKIVEIPFNSTN 486
E R + KIVEIPFNS+N
Sbjct: 404 EYRRRNKKIVEIPFNSSN 457
>36566
Length = 589
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 99/146 (67%)
Frame = +3
Query: 705 CQRQGAIVAVTGDGVNDSPALKKADIGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEE 764
Q+ G +V +TGDGVND+ ALK A+IG++MG+ G+DVSK+A+DMIL+DD+F +I+ +EE
Sbjct: 108 LQQNGLVVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDDFTTILNAIEE 287
Query: 765 GRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAY 824
G+ IF N++ + + L+++I ++ + + +P PL + IL I++ D PA SL
Sbjct: 288 GKGIFYNIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIMDGPPAQSLGV 467
Query: 825 EQAESDIMKRQPRNPKTDKLVNERLI 850
E + D++K+ PR+ D ++ RLI
Sbjct: 468 EPVDHDVIKQPPRH-VGDPIITRRLI 542
>03937
Length = 1558
Score = 118 bits (295), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/78 (65%), Positives = 58/78 (74%)
Frame = -2
Query: 946 QQGMKNKILIFGLFEETALAAFLSYCPGMGAALRMYPLKPTWWFCAFPYSLLIFVYDEVR 1005
QQGMKNK LIF F FL YCPG+ LRMYPL+ TWWF A P+SL IF+YDE R
Sbjct: 1557 QQGMKNKHLIFDXFF*DGAGRFLCYCPGLDKGLRMYPLRLTWWFTAVPFSLTIFIYDECR 1378
Query: 1006 KLIIRRRPGGWVEKETYY 1023
KLI+RR PGG+VE+ETYY
Sbjct: 1377 KLILRRXPGGFVERETYY 1324
>12151
Length = 880
Score = 88.2 bits (217), Expect(2) = 3e-25, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 93/169 (55%)
Frame = +3
Query: 726 KKADIGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 785
+KAD+G AMGI G+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 786 EITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLV 845
+ + + PL + +L ++L D + +++LA E S+++KR+P +T L+
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPYG-RTKPLI 644
Query: 846 NERLISMAYGQIGMIQALGGFFTYFVILAENGFLPFHLLGIRETWDDRW 894
++ + G F+ VIL L F G + WD RW
Sbjct: 645 SKTMWKNILGH--------AFYQILVIL----LLLFQ--GAKAVWDRRW 749
Score = 46.6 bits (109), Expect(2) = 3e-25, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Frame = +1
Query: 619 DHPITAKAIAKGVGIISEGNETVEDIAARLNIPVNQVNPRDAKACVVHGSDLKDMTSEEL 678
D+ TA++IA GII G++ + N + RDA+ +++ E++
Sbjct: 1 DNVNTARSIASKCGIIQPGDDGLVLEGKEFNQLI-----RDAEG---------EISQEKV 138
Query: 679 DDILRYHTEIVFARTSPQQKLIIVE-----GCQRQGAIVAVTGDGVNDSPALKK 727
D++ + V AR+SPQ K I+V+ +VAVTGDG ND PALKK
Sbjct: 139 DEV--WPNLRVLARSSPQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPALKK 294
>33697
Length = 310
Score = 76.3 bits (186), Expect(3) = 7e-23, Method: Composition-based stats.
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = -2
Query: 590 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKA 626
SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT++
Sbjct: 204 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITSQG 94
Score = 48.5 bits (114), Expect(3) = 7e-23, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = -3
Query: 624 AKAIAKGVGIISEGNETVEDIAARLNIPVNQVN 656
AKAIAKGVGIISEG+ TVEDI+A IPV +V+
Sbjct: 101 AKAIAKGVGIISEGSRTVEDISAERGIPVEEVD 3
Score = 21.6 bits (44), Expect(3) = 7e-23, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 577 NFPVDNLCFVGLI 589
NFP+ L FVGL+
Sbjct: 244 NFPITGLRFVGLM 206
>17925
Length = 510
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 51/60 (85%)
Frame = +3
Query: 658 RDAKACVVHGSDLKDMTSEELDDILRYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGD 717
R+A+A V+HG DLK+M ++++DDIL EIVFARTSPQQKLIIVEGCQR G IVAVTG+
Sbjct: 315 REAEAIVIHGGDLKNMDAKDIDDILHNFVEIVFARTSPQQKLIIVEGCQRNGQIVAVTGE 494
>29829
Length = 465
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 76/127 (59%)
Frame = -3
Query: 730 IGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP 789
+G AMGI G+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+ +
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 790 FLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERL 849
+ + PL + +L ++L D + +++LA E ++++KR+P +T L+++ +
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYG-RTKPLISKTM 104
Query: 850 ISMAYGQ 856
G
Sbjct: 103 FKNIAGH 83
>13525
Length = 645
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 349 KRMARKNCLVKNLEAVETLGSTSTICSDKTG 379
KRMARKNCLVKNLEAVETLGSTSTICSDKTG
Sbjct: 11 KRMARKNCLVKNLEAVETLGSTSTICSDKTG 103
>04985
Length = 1671
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Frame = -1
Query: 689 VFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIVGSDVSKQAADM 748
VFAR +P QK ++E Q IV + GDG ND ALK A G+++ + V+
Sbjct: 1608 VFARMAPDQKCALIENLQSYDYIVGMCGDGANDCEALKAAHAGISLSEAEASVAAPFTSR 1429
Query: 749 ILLDDNFASIVTGVEEGRLI----FDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGT 804
I +N +VT + EGR F K Y+ I + I+ L
Sbjct: 1428 I---NNIECVVTAMREGRAALVTSFGCFKYMALYSFIQFIS------VLILYTCQTNLSD 1276
Query: 805 VTILCIDLGTDMVPAISLAYEQAESDIMKRQP 836
+ L IDL A+ L Y A +++ +P
Sbjct: 1275 LEFLYIDLIITTTIAVLLGYTGAYDKLVRHKP 1180
>14321
Length = 568
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Frame = +2
Query: 619 DHPITAKAIAKGVGIISEGNETVEDIAARLNIP----------VNQVNPRDAKACVVHGS 668
D+P+TA +AK + + + + RL+ ++P + ++
Sbjct: 2 DNPLTACHVAKELRMTRKDKTLILTPPNRLDSDWHWQSIDDSVTQSLDPASLRKSIIPKY 181
Query: 669 DLKDMTSEELDDILRYHTEI---------VFARTSPQQKLIIVEGCQRQGAIVAVTGDGV 719
DL +T E L + H ++ VFAR +P+QK +I+ + QG + + GDG
Sbjct: 182 DLC-LTGESLTFLQSDHPKLLRLLLPNTRVFARVAPKQKELIITVLKAQGFVTLMCGDGT 358
Query: 720 NDSPALKKADIGVAM 734
ND ALK AD+GVA+
Sbjct: 359 NDVGALKHADVGVAL 403
>21541
Length = 445
Score = 40.4 bits (93), Expect(2) = 2e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 171 VIRNGEKMSINAEDVVVGDLVEVKGGDRIPADLRIISANGCK 212
VIRNGE I +++VG++ ++K GD +PAD II +N K
Sbjct: 132 VIRNGELHQIPVGEILVGEICQIKYGDLLPADGVIIQSNDLK 257
Score = 23.1 bits (48), Expect(2) = 2e-04, Method: Composition-based stats.
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 212 KVDNSSLTGESE 223
K+D SSLTGES+
Sbjct: 256 KIDESSLTGESD 291
>07486
Length = 763
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = -1
Query: 724 ALKKADIGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 783
AL +AD+G+A+G G+DV+ +AAD++L+ + + ++ R K+ A+T T +
Sbjct: 742 ALAQADVGIAIG-TGTDVAVEAADIVLMKSDLVDVYAAIKLSR------KQCGAFTSTLS 584
Query: 784 IP 785
+P
Sbjct: 583 LP 578
>05368
Length = 926
Score = 32.7 bits (73), Expect = 0.85, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 13/118 (11%)
Frame = -1
Query: 879 LPFHLLGIRETWDDRWVNDVEDSYGQQWT-YEQRKIVEFTCHTAFFVSIVVVQWADLVIC 937
+ +++G+R+ W RW + +D G+ W + C FF + ++ AD
Sbjct: 500 IQIYVIGVRQRWRSRW-DGSDDCDGKTWICL*XGRFFGSACRLVFFJYVRLMLKADDKKL 324
Query: 938 KTRR---NSVFQQ---------GMKNKILIFGLFEETALAAFLSYCPGMGAALRMYPL 983
RR NSVF Q G+K+ ++ F + A +C + A R+ L
Sbjct: 323 AKRRSFANSVFTQP*DGP*RSAGLKHDLICFHCSDTVIKCAITLFCLXLVLAGRLQSL 150
>17101
Length = 739
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 919 HTAFFVSIVVVQWADLVICKTRRNSVF 945
HT F +S+ VV WADL +C T S F
Sbjct: 111 HTCFRLSVCVVVWADL*LCITCEYSFF 31
>23730
Length = 1051
Score = 29.3 bits (64), Expect = 9.2, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -2
Query: 103 LLWIGAILCFLAYGIRSATEEEPPNDDLYLG-------VVLSAVVIITGCFSYY 149
L+W+G + F++ R + E P ++Y+G V++ +I+ C Y
Sbjct: 315 LVWVGTLKSFMSLNTRVLAQNEQPCFNMYVGYVCVCIYVLMRVCIIMCVCMCVY 154
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|21450321|ref|NP_659170.1| Na+/K+ -ATPase alpha 3
subunit [Mus musculus]
(1053 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00499 1092 0.0
14773 388 e-108
06342 313 2e-85
28890 291 1e-78
08160 214 2e-55
36566 122 1e-27
12151 86 1e-25
03937 103 3e-22
33697 74 1e-21
17925 90 5e-18
29829 74 4e-13
13525 67 3e-11
04985 60 3e-09
14321 51 3e-06
21541 37 0.001
07486 36 0.065
17101 31 3.0
>00499
Length = 4026
Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/667 (78%), Positives = 580/667 (86%)
Frame = +2
Query: 339 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSG 398
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD +I EADT++DQS
Sbjct: 44 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDGRIVEADTSDDQSN 223
Query: 399 TSFDKSSHTWVALSHIAGLCNRAVFKGGQDNIPVLKRDVAGDASESALLKCIELSSGSVK 458
++ +S TW+ALS +A LCNRA FKG QDN+P+LKR+ GDASESALLKC+ELS G V
Sbjct: 224 ATYSRSDPTWMALSRVAMLCNRAEFKGNQDNVPILKRECNGDASESALLKCVELSIGHVT 403
Query: 459 LMRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCATILLQGKEQ 518
R RN+K+ EIPFNS+NKYQ+SIHETEDP+D RYLLVMKGAPERI+DRC+TILL GKEQ
Sbjct: 404 EYRRRNEKIVEIPFNSSNKYQVSIHETEDPDDPRYLLVMKGAPERIMDRCSTILLNGKEQ 583
Query: 519 PLDEEMKEAFQNAYXXXXXXXXXXXXFCHYYLPEEQFPKGFAFDCDDVNFTTDNLCFVGL 578
PLD+ +EAF AY FC Y+LP +QFP G+ FD + NF L FVGL
Sbjct: 584 PLDDNFREAFNAAYLELGGLGERVLGFCDYFLPVDQFPPGYEFDPEGPNFPITGLRFVGL 763
Query: 579 MSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARL 638
M+MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA+GVGIISEG++TVEDIA+
Sbjct: 764 MAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIARGVGIISEGSKTVEDIASER 943
Query: 639 NIPVSQVNPRDAKACVIHGTDLKDFTSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQ 698
IPV +V+PR+AKA VIHG DL+D T QIDEIL+NH+EIVFARTSPQQKLIIVEGCQRQ
Sbjct: 944 GIPVEEVDPREAKAAVIHGGDLRDMTPAQIDEILRNHSEIVFARTSPQQKLIIVEGCQRQ 1123
Query: 699 GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLI 758
G IVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLI
Sbjct: 1124 GQIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLI 1303
Query: 759 FDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAE 818
FDNLKKSIAYTLTSNIPEI+PFLLFI+A+IPLPLGTITILCIDLGTDMVPAISLAYE AE
Sbjct: 1304 FDNLKKSIAYTLTSNIPEISPFLLFILADIPLPLGTITILCIDLGTDMVPAISLAYEKAE 1483
Query: 819 SDIMKRQPRNPRTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPGNLVGIRL 878
+DIMKRQPR+P DKLVNERLISMAYGQIGMIQA GFF+YFVI+ ENGF L+GIR+
Sbjct: 1484 NDIMKRQPRDPVKDKLVNERLISMAYGQIGMIQASAGFFTYFVIMGENGFWYDRLLGIRM 1663
Query: 879 NWDDRTVNDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQG 938
WD R VNDLEDSYGQ+WTY QRK +E+TCHTAFFVSIV+VQWAD+IICKTRR S+FQQG
Sbjct: 1664 EWDSRGVNDLEDSYGQEWTYSQRKKLEYTCHTAFFVSIVIVQWADIIICKTRRLSLFQQG 1843
Query: 939 MKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLI 998
MKNK LIFG+F ETALAAFL YCPG+D LRMYPL+ +WWF A P+S IF+YDE RKLI
Sbjct: 1844 MKNKHLIFGIFFETALAAFLCYCPGLDKGLRMYPLRLTWWFTAVPFSLTIFIYDECRKLI 2023
Query: 999 LRRNPGG 1005
LRRNPGG
Sbjct: 2024 LRRNPGG 2044
>14773
Length = 794
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/265 (69%), Positives = 217/265 (81%)
Frame = +2
Query: 729 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANI 788
SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI+PFL++I+
Sbjct: 2 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGT 181
Query: 789 PLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRTDKLVNERLISMAYGQIG 848
PLPLG ITIL IDLGTDMVPAISLAYE AESDIMKR PR +D+LVNERLI+M+YGQIG
Sbjct: 182 PLPLGVITILFIDLGTDMVPAISLAYEMAESDIMKRPPRTI-SDRLVNERLIAMSYGQIG 358
Query: 849 MIQALGGFFSYFVILAENGFLPGNLVGIRLNWDDRTVNDLEDSYGQQWTYEQRKVVEFTC 908
M+QAL GF+++ ++ ++GF+ +L GIR WD +NDLEDSYGQ WT QR VE +
Sbjct: 359 MMQALAGFYAWILVFGQSGFMVRDLPGIRSFWDSANINDLEDSYGQNWTKAQRMDVELSG 538
Query: 909 HTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVAL 968
+T FF++IV+VQW+D+IICKTRR SVF QGM N +L FG+F ET+LA LSY PG+DVAL
Sbjct: 539 YTVFFITIVLVQWSDIIICKTRRLSVFHQGMSNHVLTFGIFFETSLAVLLSYTPGVDVAL 718
Query: 969 RMYPLKPSWWFCAFPYSFLIFVYDE 993
R PL+ WW A P+ LIFVYDE
Sbjct: 719 RTRPLRFEWWLAAIPFQVLIFVYDE 793
>06342
Length = 2428
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 228/717 (31%), Positives = 361/717 (50%), Gaps = 61/717 (8%)
Frame = +2
Query: 175 VVVGDLVEIKGGDRVPADLRIISAHGC--KVDNSSLTGESEPQTRSPDCTHDNPL---ET 229
+V GD+VE+ GD+VPAD+RI+ H ++D + LTGES + D D +
Sbjct: 5 LVPGDIVEVSVGDKVPADIRILKIHSTTLRIDQAILTGESVSVMKHTDPIPDPRAVNQDK 184
Query: 230 RNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEIEHFIQLITGVA 289
+N+ F TN G +G+V+ TG T +G+I E KTP+ +++ F ++ V
Sbjct: 185 KNLLFSGTNVAAGKCKGLVIGTGLTTEIGKIRNEMMDTEQEKTPLQQKLDEFSNQLSKVI 364
Query: 290 VFLGVSFFILSL------ILGYTWLEAVIFLIGIIVANV----PEGXXXXXXXXXXXXXK 339
+ ++ + +++ G +W++ I+ I VA PEG +
Sbjct: 365 TIICIAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 544
Query: 340 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGT 399
RMA+KN +V++L +VETLG TS ICSDKTGTLT N+M+V ++ +QI DT + ++ T
Sbjct: 545 RMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKLFIFSQI---DTNQIKT-T 712
Query: 400 SFDKSSHTWVA---------------------LSHIAGLCNRAVFKGGQDNIPVLKRDVA 438
F+ + T+ L I G+CN + + K
Sbjct: 713 QFEVTGSTYAPDGELYQNGKKVKASDYPGLEELCTICGMCNDSSVDYNEAKTQYEK---V 883
Query: 439 GDASESAL----------------LKCIELSSGSVKLMRERNKKVAEIPFNSTNKYQLSI 482
G+A+E+AL L E+ + ++++ +K + F S ++ +S+
Sbjct: 884 GEATETALTVLAEKLNFYNTDKSSLNKREMGTVCNHVIQDMWRKEFTLEF-SRDRKSMSV 1060
Query: 483 -----HETEDPNDNRYLLVMKGAPERILDRCATILLQGKEQPLDEEMKEAFQNAYXXXXX 537
T P R + KGAPE +LDRC + + + P+ +K
Sbjct: 1061FCVPNKPTRVPGGAR--MFAKGAPEGLLDRCTHVRIGNNKVPMSPAIKNEIMK--LTKIY 1228
Query: 538 XXXXXXXFCHYYLPEEQFPKGFAFDCDD----VNFTTDNLCFVGLMSMIDPPRAAVPDAV 593
C + P+ D +D + + T N+ FVG++ M+DPPR V ++
Sbjct: 1229GTGRDTLRCLALATIDNPPRREDMDLEDSRKFIEYET-NMTFVGVVGMLDPPREEVMASI 1405
Query: 594 GKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKAC 653
CR+AGI+VI++TGD+ TA+AI + +G+ SE +E E +A ++ P D +A
Sbjct: 1406KNCRAAGIRVIVITGDNKATAEAICRRIGVFSE-SENTEGLA-YTGREFDELPPEDQRAA 1579
Query: 654 VIHGTDLKDFTSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSP 713
V+ +FAR P K IVE Q +G I A+TGDGVND+P
Sbjct: 1580VMRAR--------------------LFARVEPAHKSKIVEYLQAEGEISAMTGDGVNDAP 1699
Query: 714 ALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 773
ALKKA+IG+AMG +G+ V+K A++M+L DDNF++IV VEEGR I++N+K+ I Y ++SN
Sbjct: 1700ALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN 1876
Query: 774 IPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPR 830
I E+ L IP L + +L ++L TD PA +L + + DIM++ PRNPR
Sbjct: 1877IGEVVCIFLTAALGIPEALIPVQLLWVNLVTDGFPATALGFNPPDLDIMQKPPRNPR 2047
>28890
Length = 552
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/183 (76%), Positives = 160/183 (87%)
Frame = -3
Query: 132 ITGCFSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQVNAEEVVVGDLVEIKGGDRVPA 191
+TG FSYYQEAKSSKIM+SFKN+VPQ A+V+R +K+ V AEE+VVGD+VE K GDRVPA
Sbjct: 550 VTGVFSYYQEAKSSKIMDSFKNLVPQFAVVVRGDQKLSVKAEELVVGDIVECKFGDRVPA 371
Query: 192 DLRIISAHGCKVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFSTNCVEGTARGVVVAT 251
DLR+ISAHG KVDNSSLTGESEPQ+RS + TH+NPLETRNI FFSTN VEGT RG+V+ T
Sbjct: 370 DLRVISAHGFKVDNSSLTGESEPQSRSAEFTHENPLETRNICFFSTNAVEGTCRGIVIKT 191
Query: 252 GDRTVMGRIATLASGLEVGKTPIAIEIEHFIQLITGVAVFLGVSFFILSLILGYTWLEAV 311
GD TVMGRIA LASGLEVG TPIA EI HFI +ITGVAVFLGVSFF+++ ILGY WL+AV
Sbjct: 190 GDDTVMGRIANLASGLEVGDTPIAKEIAHFIHIITGVAVFLGVSFFVIAFILGYFWLDAV 11
Query: 312 IFL 314
IFL
Sbjct: 10 IFL 2
>08160
Length = 459
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 116/138 (84%)
Frame = +2
Query: 339 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSG 398
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD +I EADT++DQS
Sbjct: 44 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDGRIVEADTSDDQSN 223
Query: 399 TSFDKSSHTWVALSHIAGLCNRAVFKGGQDNIPVLKRDVAGDASESALLKCIELSSGSVK 458
++ ++ TW+AL+ + LCNRA FKG QDN+P+LKR+ GDASESALLK +ELS G V
Sbjct: 224 ATYSRTDVTWMALARVGMLCNRAEFKGNQDNVPILKRECNGDASESALLKAVELSIGQVT 403
Query: 459 LMRERNKKVAEIPFNSTN 476
R RNKK+ EIPFNS+N
Sbjct: 404 EYRRRNKKIVEIPFNSSN 457
>36566
Length = 589
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 100/146 (68%)
Frame = +3
Query: 695 CQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEE 754
Q+ G +V +TGDGVND+ ALK A+IG++MG++G+DVSK+A+DMIL+DD+F +I+ +EE
Sbjct: 108 LQQNGLVVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDDFTTILNAIEE 287
Query: 755 GRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAY 814
G+ IF N++ + + L+++I ++ + + +P PL + IL I++ D PA SL
Sbjct: 288 GKGIFYNIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIMDGPPAQSLGV 467
Query: 815 EAAESDIMKRQPRNPRTDKLVNERLI 840
E + D++K+ PR+ D ++ RLI
Sbjct: 468 EPVDHDVIKQPPRH-VGDPIITRRLI 542
>12151
Length = 880
Score = 85.5 bits (210), Expect(2) = 1e-25, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
Frame = +3
Query: 716 KKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 775
+KAD+G AMGI+G+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 776 EITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQP---RNPRTD 832
+ + + PL I +L ++L D + +++LA E S+++KR+P P
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPYGRTKPLIS 647
Query: 833 KLVNERLISMAYGQIGMIQAL 853
K + + ++ A+ QI +I L
Sbjct: 648 KTMWKNILGHAFYQILVILLL 710
Score = 50.4 bits (119), Expect(2) = 1e-25, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +1
Query: 609 DHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVIHGTDLKDFTSEQI 668
D+ TA++IA GII G++ + N + RDA+ + + E++
Sbjct: 1 DNVNTARSIASKCGIIQPGDDGLVLEGKEFNQLI-----RDAEG---------EISQEKV 138
Query: 669 DEILQNHTEIVFARTSPQQKLIIVE-----GCQRQGAIVAVTGDGVNDSPALKK 717
DE+ N V AR+SPQ K I+V+ +VAVTGDG ND PALKK
Sbjct: 139 DEVWPNLR--VLARSSPQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPALKK 294
>03937
Length = 1558
Score = 103 bits (258), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = -2
Query: 936 QQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIR 995
QQGMKNK LIF F FL YCPG+D LRMYPL+ +WWF A P+S IF+YDE R
Sbjct: 1557 QQGMKNKHLIFDXFF*DGAGRFLCYCPGLDKGLRMYPLRLTWWFTAVPFSLTIFIYDECR 1378
Query: 996 KLILRRNPGG 1005
KLILRR PGG
Sbjct: 1377 KLILRRXPGG 1348
>33697
Length = 310
Score = 73.9 bits (180), Expect(2) = 1e-21, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = -2
Query: 580 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKA 616
SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT++
Sbjct: 204 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITSQG 94
Score = 48.5 bits (114), Expect(2) = 1e-21, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = -3
Query: 614 AKAIAKGVGIISEGNETVEDIAARLNIPVSQVN 646
AKAIAKGVGIISEG+ TVEDI+A IPV +V+
Sbjct: 101 AKAIAKGVGIISEGSRTVEDISAERGIPVEEVD 3
>17925
Length = 510
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +3
Query: 648 RDAKACVIHGTDLKDFTSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGD 707
R+A+A VIHG DLK+ ++ ID+IL N EIVFARTSPQQKLIIVEGCQR G IVAVTG+
Sbjct: 315 REAEAIVIHGGDLKNMDAKDIDDILHNFVEIVFARTSPQQKLIIVEGCQRNGQIVAVTGE 494
>29829
Length = 465
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 77/127 (60%)
Frame = -3
Query: 720 IGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP 779
+G AMGI+G+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+ +
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 780 FLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRTDKLVNERL 839
+ + PL I +L ++L D + +++LA E ++++KR+P RT L+++ +
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYG-RTKPLISKTM 104
Query: 840 ISMAYGQ 846
G
Sbjct: 103 FKNIAGH 83
>13525
Length = 645
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 39/57 (68%)
Frame = +2
Query: 339 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTED 395
KRMARKNCLVKNLEAVETLGSTSTICSDKTG + + HE+ T +D
Sbjct: 11 KRMARKNCLVKNLEAVETLGSTSTICSDKTGCGEERGARGGGG---DDGHESKTHQD 172
>04985
Length = 1671
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Frame = -1
Query: 679 VFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 738
VFAR +P QK ++E Q IV + GDG ND ALK A G+++ A + V+
Sbjct: 1608 VFARMAPDQKCALIENLQSYDYIVGMCGDGANDCEALKAAHAGISLSEAEASVAAPFTSR 1429
Query: 739 ILLDDNFASIVTGVEEGRLIFDNLKKSIAY-TLTSNIPEITPFLLFIMANIPLPLGTITI 797
I +N +VT + EGR Y L S I I+ +L+ L +
Sbjct: 1428 I---NNIECVVTAMREGRAALVTSFGCFKYMALYSFIQFISVLILYTCQT---NLSDLEF 1267
Query: 798 LCIDLGTDMVPAISLAYEAAESDIMKRQP 826
L IDL A+ L Y A +++ +P
Sbjct: 1266 LYIDLIITTTIAVLLGYTGAYDKLVRHKP 1180
>14321
Length = 568
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 19/135 (14%)
Frame = +2
Query: 609 DHPITAKAIAKGVGIISEGNETVEDIAARLNI---------PVSQ-VNPRDAKACVIHGT 658
D+P+TA +AK + + + + RL+ V+Q ++P + +I
Sbjct: 2 DNPLTACHVAKELRMTRKDKTLILTPPNRLDSDWHWQSIDDSVTQSLDPASLRKSIIPKY 181
Query: 659 DLKDFTSEQIDEILQNHTEI---------VFARTSPQQKLIIVEGCQRQGAIVAVTGDGV 709
DL T E + + +H ++ VFAR +P+QK +I+ + QG + + GDG
Sbjct: 182 DLC-LTGESLTFLQSDHPKLLRLLLPNTRVFARVAPKQKELIITVLKAQGFVTLMCGDGT 358
Query: 710 NDSPALKKADIGVAM 724
ND ALK AD+GVA+
Sbjct: 359 NDVGALKHADVGVAL 403
>21541
Length = 445
Score = 36.6 bits (83), Expect(2) = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +3
Query: 136 FSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQVNAEEVVVGDLVEIKGGDRVPADLRI 195
F+ + + K + ++S K + VIR GE Q+ E++VG++ +IK GD +PAD I
Sbjct: 60 FNDWSKEKQFRGLQS-KIEHEHRFTVIRNGELHQIPVGEILVGEICQIKYGDLLPADGVI 236
Query: 196 ISAHGCK 202
I ++ K
Sbjct: 237 IQSNDLK 257
Score = 24.3 bits (51), Expect(2) = 0.001, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 202 KVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFS-TNCVEGTAR 245
K+D SSLTGES+ H E ++ S T+ +EG+ R
Sbjct: 256 KIDESSLTGESD---------HVKKGEAKDPMLLSGTHVMEGSGR 363
>07486
Length = 763
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = -1
Query: 714 ALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 773
AL +AD+G+A+G G+DV+ +AAD++L+ + + ++ R K+ A+T T +
Sbjct: 742 ALAQADVGIAIG-TGTDVAVEAADIVLMKSDLVDVYAAIKLSR------KQCGAFTSTLS 584
Query: 774 IP 775
+P
Sbjct: 583 LP 578
>17101
Length = 739
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 909 HTAFFVSIVVVQWADLIICKTRRNSVF 935
HT F +S+ VV WADL +C T S F
Sbjct: 111 HTCFRLSVCVVVWADL*LCITCEYSFF 31
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|30409956|ref|NP_848492.1| Na+/K+ -ATPase alpha 2
subunit [Mus musculus]
(1020 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00499 1101 0.0
14773 379 e-105
06342 320 1e-87
28890 305 8e-83
08160 205 6e-53
36566 123 3e-28
03937 118 1e-26
12151 83 2e-24
33697 76 1e-22
17925 91 3e-18
29829 72 8e-13
13525 68 2e-11
04985 61 2e-09
14321 53 7e-07
21541 40 1e-04
07486 38 0.021
18443 33 0.69
17101 30 5.7
>00499
Length = 4026
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/675 (78%), Positives = 589/675 (87%), Gaps = 1/675 (0%)
Frame = +2
Query: 347 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSG 406
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD +I EADT++DQS
Sbjct: 44 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDGRIVEADTSDDQSN 223
Query: 407 ATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVR 466
AT+ + PTW ALSR+A LCNRA FK Q+N+ + KR+ GDASESALLKC+ELS G V
Sbjct: 224 ATYSRSDPTWMALSRVAMLCNRAEFKGNQDNVPILKRECNGDASESALLKCVELSIGHVT 403
Query: 467 KMRDRNPKVAEIPFNSTNKYQLSIHEREDSPQ-SHVLVMKGAPERILDRCSTILVQGKEI 525
+ R RN K+ EIPFNS+NKYQ+SIHE ED ++LVMKGAPERI+DRCSTIL+ GKE
Sbjct: 404 EYRRRNEKIVEIPFNSSNKYQVSIHETEDPDDPRYLLVMKGAPERIMDRCSTILLNGKEQ 583
Query: 526 PLDKEMQDAFQNAYMELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGL 585
PLD ++AF AY+ELGGLGERVLGFC LP +FP G++FD + NFP L FVGL
Sbjct: 584 PLDDNFREAFNAAYLELGGLGERVLGFCDYFLPVDQFPPGYEFDPEGPNFPITGLRFVGL 763
Query: 586 MSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARL 645
M+MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA+GVGIISEG++TVEDIA+
Sbjct: 764 MAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIARGVGIISEGSKTVEDIASER 943
Query: 646 NIPVSQVNPREAKACVVHGSDLKDMTSEQLDEILRDHTEIVFARTSPQQKLIIVEGCQRQ 705
IPV +V+PREAKA V+HG DL+DMT Q+DEILR+H+EIVFARTSPQQKLIIVEGCQRQ
Sbjct: 944 GIPVEEVDPREAKAAVIHGGDLRDMTPAQIDEILRNHSEIVFARTSPQQKLIIVEGCQRQ 1123
Query: 706 GAIVAVTGDGVNDSPALKKADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLI 765
G IVAVTGDGVNDSPALKKADIG+AMGI+GSDVSKQAADMILLDDNFASIVTGVEEGRLI
Sbjct: 1124 GQIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLI 1303
Query: 766 FDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAE 825
FDNLKKSIAYTLTSNIPEI+PFLLFI+A+IPLPLGT+TILCIDLGTDMVPAISLAYE AE
Sbjct: 1304 FDNLKKSIAYTLTSNIPEISPFLLFILADIPLPLGTITILCIDLGTDMVPAISLAYEKAE 1483
Query: 826 SDIMKRQPRNSQTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPSRLLGIRL 885
+DIMKRQPR+ DKLVNERLISMAYGQIGMIQA GFFTYFVI+ ENGF RLLGIR+
Sbjct: 1484 NDIMKRQPRDPVKDKLVNERLISMAYGQIGMIQASAGFFTYFVIMGENGFWYDRLLGIRM 1663
Query: 886 DWDDRTTNDLEDSYGQEWTYEQRKVVEFTCHTAFFASIVVVQWADLIICKTRRNSVFQQG 945
+WD R NDLEDSYGQEWTY QRK +E+TCHTAFF SIV+VQWAD+IICKTRR S+FQQG
Sbjct: 1664 EWDSRGVNDLEDSYGQEWTYSQRKKLEYTCHTAFFVSIVIVQWADIIICKTRRLSLFQQG 1843
Query: 946 MKNKILIFGLLEETALAAFLSYCPGMGVALRMYPLKVTWWFCAFPYSLLIFIYDEVRKLI 1005
MKNK LIFG+ ETALAAFL YCPG+ LRMYPL++TWWF A P+SL IFIYDE RKLI
Sbjct: 1844 MKNKHLIFGIFFETALAAFLCYCPGLDKGLRMYPLRLTWWFTAVPFSLTIFIYDECRKLI 2023
Query: 1006 LRRYPGGWVEKETYY 1020
LRR PGG+VE+ETYY
Sbjct: 2024 LRRNPGGFVERETYY 2068
>14773
Length = 794
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 213/265 (80%)
Frame = +2
Query: 736 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANI 795
SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI+PFL++I+
Sbjct: 2 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGT 181
Query: 796 PLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRNSQTDKLVNERLISMAYGQIG 855
PLPLG +TIL IDLGTDMVPAISLAYE AESDIMKR PR + +D+LVNERLI+M+YGQIG
Sbjct: 182 PLPLGVITILFIDLGTDMVPAISLAYEMAESDIMKRPPR-TISDRLVNERLIAMSYGQIG 358
Query: 856 MIQALGGFFTYFVILAENGFLPSRLLGIRLDWDDRTTNDLEDSYGQEWTYEQRKVVEFTC 915
M+QAL GF+ + ++ ++GF+ L GIR WD NDLEDSYGQ WT QR VE +
Sbjct: 359 MMQALAGFYAWILVFGQSGFMVRDLPGIRSFWDSANINDLEDSYGQNWTKAQRMDVELSG 538
Query: 916 HTAFFASIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLLEETALAAFLSYCPGMGVAL 975
+T FF +IV+VQW+D+IICKTRR SVF QGM N +L FG+ ET+LA LSY PG+ VAL
Sbjct: 539 YTVFFITIVLVQWSDIIICKTRRLSVFHQGMSNHVLTFGIFFETSLAVLLSYTPGVDVAL 718
Query: 976 RMYPLKVTWWFCAFPYSLLIFIYDE 1000
R PL+ WW A P+ +LIF+YDE
Sbjct: 719 RTRPLRFEWWLAAIPFQVLIFVYDE 793
>06342
Length = 2428
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 236/722 (32%), Positives = 373/722 (51%), Gaps = 67/722 (9%)
Frame = +2
Query: 183 VVVGDLVEVKGGDRVPADLRIISSHGC--KVDNSSLTGESEPQTRSPEFTHENPL----- 235
+V GD+VEV GD+VPAD+RI+ H ++D + LTGES + H +P+
Sbjct: 5 LVPGDIVEVSVGDKVPADIRILKIHSTTLRIDQAILTGESVSVMK-----HTDPIPDPRA 169
Query: 236 ---ETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLEVGQTPIAMEIEHFIQL 292
+ +N+ F TN G +G+VI TG T +G+I E +TP+ +++ F
Sbjct: 170 VNQDKKNLLFSGTNVAAGKCKGLVIGTGLTTEIGKIRNEMMDTEQEKTPLQQKLDEFSNQ 349
Query: 293 ITGVAVFLGVSFFVLSL------ILGYSWLEAVIFLIGIIVANV----PEGXXXXXXXXX 342
++ V + ++ + +++ G SW++ I+ I VA PEG
Sbjct: 350 LSKVITIICIAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCL 529
Query: 343 XXXXKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQI--HEADT 400
+RMA+KN +V++L +VETLG TS ICSDKTGTLT N+M+V ++ +QI ++ T
Sbjct: 530 ALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKLFIFSQIDTNQIKT 709
Query: 401 TE-DQSGATFDKRS--------------PTWTALSRIAGLCNRAVFKAGQENISVSKRDT 445
T+ + +G+T+ P L I G+CN + N + ++ +
Sbjct: 710 TQFEVTGSTYAPDGELYQNGKKVKASDYPGLEELCTICGMCNDSSV---DYNEAKTQYEK 880
Query: 446 AGDASESAL----------------LKCIELSCGSVRKMRDRNPKVAEIPFNSTNKYQLS 489
G+A+E+AL L E+ ++D K + F S ++ +S
Sbjct: 881 VGEATETALTVLAEKLNFYNTDKSSLNKREMGTVCNHVIQDMWRKEFTLEF-SRDRKSMS 1057
Query: 490 I----HEREDSPQSHVLVMKGAPERILDRCSTILVQGKEIPLDKEMQDAFQNAYMELG-- 543
+ ++ P + KGAPE +LDRC+ + + ++P M A +N M+L
Sbjct: 1058VFCVPNKPTRVPGGARMFAKGAPEGLLDRCTHVRIGNNKVP----MSPAIKNEIMKLTKI 1225
Query: 544 -GLGE---RVLGFCQLNLPSGKFPRGFKFDTDE----LNFPTEKLCFVGLMSMIDPPRAA 595
G G R L ++ P PR D ++ + + T + FVG++ M+DPPR
Sbjct: 1226YGTGRDTLRCLALATIDNP----PRREDMDLEDSRKFIEYET-NMTFVGVVGMLDPPREE 1390
Query: 596 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPR 655
V ++ CR+AGI+VI++TGD+ TA+AI + +G+ SE +E E +A ++ P
Sbjct: 1391VMASIKNCRAAGIRVIVITGDNKATAEAICRRIGVFSE-SENTEGLA-YTGREFDELPPE 1564
Query: 656 EAKACVVHGSDLKDMTSEQLDEILRDHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDG 715
+ +A V+ +FAR P K IVE Q +G I A+TGDG
Sbjct: 1565DQRAAVMRAR--------------------LFARVEPAHKSKIVEYLQAEGEISAMTGDG 1684
Query: 716 VNDSPALKKADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 775
VND+PALKKA+IGIAMG SG+ V+K A++M+L DDNF++IV VEEGR I++N+K+ I Y
Sbjct: 1685VNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRY 1861
Query: 776 TLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRN 835
++SNI E+ L IP L V +L ++L TD PA +L + + DIM++ PRN
Sbjct: 1862LISSNIGEVVCIFLTAALGIPEALIPVQLLWVNLVTDGFPATALGFNPPDLDIMQKPPRN 2041
Query: 836 SQ 837
+
Sbjct: 2042PR 2047
>28890
Length = 552
Score = 305 bits (780), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 147/183 (80%), Positives = 162/183 (88%)
Frame = -3
Query: 140 VTGCFSYYQEAKSSKIMDSFKNMVPQQALVIREGEKMQINAEEVVVGDLVEVKGGDRVPA 199
VTG FSYYQEAKSSKIMDSFKN+VPQ A+V+R +K+ + AEE+VVGD+VE K GDRVPA
Sbjct: 550 VTGVFSYYQEAKSSKIMDSFKNLVPQFAVVVRGDQKLSVKAEELVVGDIVECKFGDRVPA 371
Query: 200 DLRIISSHGCKVDNSSLTGESEPQTRSPEFTHENPLETRNICFFSTNCVEGTARGIVIAT 259
DLR+IS+HG KVDNSSLTGESEPQ+RS EFTHENPLETRNICFFSTN VEGT RGIVI T
Sbjct: 370 DLRVISAHGFKVDNSSLTGESEPQSRSAEFTHENPLETRNICFFSTNAVEGTCRGIVIKT 191
Query: 260 GDRTVMGRIATLASGLEVGQTPIAMEIEHFIQLITGVAVFLGVSFFVLSLILGYSWLEAV 319
GD TVMGRIA LASGLEVG TPIA EI HFI +ITGVAVFLGVSFFV++ ILGY WL+AV
Sbjct: 190 GDDTVMGRIANLASGLEVGDTPIAKEIAHFIHIITGVAVFLGVSFFVIAFILGYFWLDAV 11
Query: 320 IFL 322
IFL
Sbjct: 10 IFL 2
>08160
Length = 459
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 113/138 (81%)
Frame = +2
Query: 347 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSG 406
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD +I EADT++DQS
Sbjct: 44 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDGRIVEADTSDDQSN 223
Query: 407 ATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVR 466
AT+ + TW AL+R+ LCNRA FK Q+N+ + KR+ GDASESALLK +ELS G V
Sbjct: 224 ATYSRTDVTWMALARVGMLCNRAEFKGNQDNVPILKRECNGDASESALLKAVELSIGQVT 403
Query: 467 KMRDRNPKVAEIPFNSTN 484
+ R RN K+ EIPFNS+N
Sbjct: 404 EYRRRNKKIVEIPFNSSN 457
>36566
Length = 589
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 100/146 (68%)
Frame = +3
Query: 702 CQRQGAIVAVTGDGVNDSPALKKADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEE 761
Q+ G +V +TGDGVND+ ALK A+IGI+MG+SG+DVSK+A+DMIL+DD+F +I+ +EE
Sbjct: 108 LQQNGLVVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDDFTTILNAIEE 287
Query: 762 GRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAY 821
G+ IF N++ + + L+++I ++ + + +P PL + IL I++ D PA SL
Sbjct: 288 GKGIFYNIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIMDGPPAQSLGV 467
Query: 822 EAAESDIMKRQPRNSQTDKLVNERLI 847
E + D++K+ PR+ D ++ RLI
Sbjct: 468 EPVDHDVIKQPPRHVG-DPIITRRLI 542
>03937
Length = 1558
Score = 118 bits (296), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/78 (66%), Positives = 58/78 (74%)
Frame = -2
Query: 943 QQGMKNKILIFGLLEETALAAFLSYCPGMGVALRMYPLKVTWWFCAFPYSLLIFIYDEVR 1002
QQGMKNK LIF FL YCPG+ LRMYPL++TWWF A P+SL IFIYDE R
Sbjct: 1557 QQGMKNKHLIFDXFF*DGAGRFLCYCPGLDKGLRMYPLRLTWWFTAVPFSLTIFIYDECR 1378
Query: 1003 KLILRRYPGGWVEKETYY 1020
KLILRR PGG+VE+ETYY
Sbjct: 1377 KLILRRXPGGFVERETYY 1324
>12151
Length = 880
Score = 83.2 bits (204), Expect(2) = 2e-24, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 86/148 (58%)
Frame = +3
Query: 723 KKADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 782
+KAD+G AMGISG+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 783 EITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRNSQTDKLV 842
+ + + PL + +L ++L D + +++LA E S+++KR+P +T L+
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPY-GRTKPLI 644
Query: 843 NERLISMAYGQIGMIQALGGFFTYFVIL 870
++ + G F+ VIL
Sbjct: 645 SKTMWKNILGH--------AFYQILVIL 704
Score = 48.9 bits (115), Expect(2) = 2e-24, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Frame = +1
Query: 616 DHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPREAKACVVHGSDLKDMTSEQL 675
D+ TA++IA GII G++ + N + R+A+ +++ E++
Sbjct: 1 DNVNTARSIASKCGIIQPGDDGLVLEGKEFNQLI-----RDAEG---------EISQEKV 138
Query: 676 DEILRDHTEIVFARTSPQQKLIIVE-----GCQRQGAIVAVTGDGVNDSPALKK 724
DE+ + V AR+SPQ K I+V+ +VAVTGDG ND PALKK
Sbjct: 139 DEVWPNLR--VLARSSPQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPALKK 294
>33697
Length = 310
Score = 76.3 bits (186), Expect(3) = 1e-22, Method: Composition-based stats.
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = -2
Query: 587 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKA 623
SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT++
Sbjct: 204 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITSQG 94
Score = 48.1 bits (113), Expect(3) = 1e-22, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = -3
Query: 621 AKAIAKGVGIISEGNETVEDIAARLNIPVSQVN 653
AKAIAKGVGIISEG+ TVEDI+A IPV +V+
Sbjct: 101 AKAIAKGVGIISEGSRTVEDISAERGIPVEEVD 3
Score = 21.2 bits (43), Expect(3) = 1e-22, Method: Composition-based stats.
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 574 NFPTEKLCFVGLM 586
NFP L FVGLM
Sbjct: 244 NFPITGLRFVGLM 206
>17925
Length = 510
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 51/60 (85%)
Frame = +3
Query: 655 REAKACVVHGSDLKDMTSEQLDEILRDHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGD 714
REA+A V+HG DLK+M ++ +D+IL + EIVFARTSPQQKLIIVEGCQR G IVAVTG+
Sbjct: 315 REAEAIVIHGGDLKNMDAKDIDDILHNFVEIVFARTSPQQKLIIVEGCQRNGQIVAVTGE 494
>29829
Length = 465
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 77/127 (60%)
Frame = -3
Query: 727 IGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP 786
+G AMGISG+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+ +
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 787 FLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRNSQTDKLVNERL 846
+ + PL + +L ++L D + +++LA E ++++KR+P +T L+++ +
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYG-RTKPLISKTM 104
Query: 847 ISMAYGQ 853
G
Sbjct: 103 FKNIAGH 83
>13525
Length = 645
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 39/57 (68%)
Frame = +2
Query: 347 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTED 403
KRMARKNCLVKNLEAVETLGSTSTICSDKTG + + HE+ T +D
Sbjct: 11 KRMARKNCLVKNLEAVETLGSTSTICSDKTGCGEERGARGGGG---DDGHESKTHQD 172
>04985
Length = 1671
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Frame = -1
Query: 686 VFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGISGSDVSKQAADM 745
VFAR +P QK ++E Q IV + GDG ND ALK A GI++ + + V+
Sbjct: 1608 VFARMAPDQKCALIENLQSYDYIVGMCGDGANDCEALKAAHAGISLSEAEASVAAPFTSR 1429
Query: 746 ILLDDNFASIVTGVEEGRLIFDNLKKSIAY-TLTSNIPEITPFLLFIIANIPLPLGTVTI 804
I +N +VT + EGR Y L S I I+ +L+ L +
Sbjct: 1428 I---NNIECVVTAMREGRAALVTSFGCFKYMALYSFIQFISVLILYTCQT---NLSDLEF 1267
Query: 805 LCIDLGTDMVPAISLAYEAAESDIMKRQPRNS 836
L IDL A+ L Y A +++ +P +S
Sbjct: 1266 LYIDLIITTTIAVLLGYTGAYDKLVRHKPPDS 1171
>14321
Length = 568
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 19/135 (14%)
Frame = +2
Query: 616 DHPITAKAIAKGVGIISEGNETVEDIAARLNI---------PVSQ-VNPREAKACVVHGS 665
D+P+TA +AK + + + + RL+ V+Q ++P + ++
Sbjct: 2 DNPLTACHVAKELRMTRKDKTLILTPPNRLDSDWHWQSIDDSVTQSLDPASLRKSIIPKY 181
Query: 666 DLKDMTSEQLDEILRDHTEI---------VFARTSPQQKLIIVEGCQRQGAIVAVTGDGV 716
DL +T E L + DH ++ VFAR +P+QK +I+ + QG + + GDG
Sbjct: 182 DLC-LTGESLTFLQSDHPKLLRLLLPNTRVFARVAPKQKELIITVLKAQGFVTLMCGDGT 358
Query: 717 NDSPALKKADIGIAM 731
ND ALK AD+G+A+
Sbjct: 359 NDVGALKHADVGVAL 403
>21541
Length = 445
Score = 40.4 bits (93), Expect(2) = 1e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 169 VIREGEKMQINAEEVVVGDLVEVKGGDRVPADLRIISSHGCK 210
VIR GE QI E++VG++ ++K GD +PAD II S+ K
Sbjct: 132 VIRNGELHQIPVGEILVGEICQIKYGDLLPADGVIIQSNDLK 257
Score = 24.3 bits (51), Expect(2) = 1e-04, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 210 KVDNSSLTGESEPQTRSPEFTHENPLETRNICFFS-TNCVEGTAR 253
K+D SSLTGES+ H E ++ S T+ +EG+ R
Sbjct: 256 KIDESSLTGESD---------HVKKGEAKDPMLLSGTHVMEGSGR 363
>07486
Length = 763
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = -1
Query: 721 ALKKADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 780
AL +AD+GIA+G +G+DV+ +AAD++L+ + + ++ R K+ A+T T +
Sbjct: 742 ALAQADVGIAIG-TGTDVAVEAADIVLMKSDLVDVYAAIKLSR------KQCGAFTSTLS 584
Query: 781 IP 782
+P
Sbjct: 583 LP 578
>18443
Length = 945
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -3
Query: 180 AEEVVVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESEP--QTRSPEFTHENPLET 237
EE V+G +VEV GGD + D+ S+ V N L S QT P F
Sbjct: 190 GEEAVLGVVVEVDGGDAMSQDVDDTHSYQLTVQNVVLVERSVSLWQTSLPFFG------- 32
Query: 238 RNICFFSTNCV 248
N C F CV
Sbjct: 31 -NFCLFYPVCV 2
>17101
Length = 739
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 916 HTAFFASIVVVQWADLIICKTRRNSVF 942
HT F S+ VV WADL +C T S F
Sbjct: 111 HTCFRLSVCVVVWADL*LCITCEYSFF 31
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|30425250|ref|NP_780706.1| actin, beta-like 2 [Mus
musculus]
(376 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04742 729 0.0
39562 590 e-169
02757 284 e-117
12322 235 2e-62
00608 187 4e-48
01436 169 1e-42
11487 94 2e-40
19721 96 4e-30
36954 119 2e-27
32273 117 1e-26
18926 107 8e-24
13361 87 1e-17
17032 33 0.19
06132 30 1.7
06084 28 8.0
>04742
Length = 2111
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/376 (90%), Positives = 361/376 (96%)
Frame = +2
Query: 1 MVDDELTALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQ 60
M D+++ ALV+DNGSGMCKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQ
Sbjct: 92 MCDEDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 271
Query: 61 SKRGILTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKM 120
SKRGILTLKYPIEHG+VTNWDDMEKIW+HTFYNELRVAP+EHP+LLTEAPLNPK NREKM
Sbjct: 272 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 451
Query: 121 TQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
TQIMFE FN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIYEGYALPHAI RLD
Sbjct: 452 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYEGYALPHAISRLD 631
Query: 181 LAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERS 240
LAGRDLTDYLMKILTERGY+FTTTAEREIVRD+KEKLCYVALDFEQEM TAA+SSSLE+S
Sbjct: 632 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKS 811
Query: 241 YELPDGQVITIGNERFRCPEAIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLFANTVL 300
YELPDGQVITIGNERFRCPEA+FQPSFLG+ES G HETT+NSIMKCDVDIRKDL+ANTVL
Sbjct: 812 YELPDGQVITIGNERFRCPEAMFQPSFLGMESAGXHETTYNSIMKCDVDIRKDLYANTVL 991
Query: 301 SGGSTMYPGIADRMQKEIVTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
SGGSTMYPGIADRMQKEI LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 992 SGGSTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 1171
Query: 361 QEYDEAGPPIVHRKCF 376
QEYDE+GP IVHRKCF
Sbjct: 1172QEYDESGPSIVHRKCF 1219
>39562
Length = 1438
Score = 590 bits (1520), Expect = e-169, Method: Compositional matrix adjust.
Identities = 276/301 (91%), Positives = 293/301 (97%)
Frame = -2
Query: 76 VVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQIMFEAFNTPAMYV 135
+VTNWDDMEKIW+HTFYNELRVAP+EHP+LLTEAPLNPK NREKMTQIMFE FN+PAMYV
Sbjct: 1437 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 1258
Query: 136 AIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
AIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 1257 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 1078
Query: 196 ERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERSYELPDGQVITIGNER 255
ERGY+FTTTAEREIVRD+KEKL YVALDFEQEM+TAA+SSSLE+SYELPDGQVITIGNER
Sbjct: 1077 ERGYSFTTTAEREIVRDIKEKLDYVALDFEQEMLTAASSSSLEKSYELPDGQVITIGNER 898
Query: 256 FRCPEAIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLFANTVLSGGSTMYPGIADRMQ 315
FRCPEA+FQPSFLG+ES GIHETT+NSIMKCDVDIRKDL+ANTVLSGGSTMYPGIADRMQ
Sbjct: 897 FRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQ 718
Query: 316 KEIVTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPIVHRKC 375
KEI LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE+GP IVHRKC
Sbjct: 717 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 538
Query: 376 F 376
F
Sbjct: 537 F 535
>02757
Length = 1094
Score = 284 bits (726), Expect(3) = e-117, Method: Compositional matrix adjust.
Identities = 134/151 (88%), Positives = 145/151 (96%)
Frame = -2
Query: 173 PHAILRLDLAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAA 232
P AILRLDLAGRDLTDYLMKILTERGY+FTTTAEREIV D+KEKLCYVALDFEQEM TAA
Sbjct: 997 PTAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVXDIKEKLCYVALDFEQEMATAA 818
Query: 233 ASSSLERSYELPDGQVITIGNERFRCPEAIFQPSFLGIESRGIHETTFNSIMKCDVDIRK 292
+SSSLE+SYELPDGQVITIGNERFRCPE++FQPSFLG+ES GIHETT+NSIMKCDVDIRK
Sbjct: 817 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRK 638
Query: 293 DLFANTVLSGGSTMYPGIADRMQKEIVTLAP 323
DL+ANTVLSGG+TM+PGIADRMQKEI LAP
Sbjct: 637 DLYANTVLSGGTTMFPGIADRMQKEITALAP 545
Score = 108 bits (269), Expect(3) = e-117, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -3
Query: 324 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPIVHRKCF 376
STMKIK IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE+GP IVHRKCF
Sbjct: 543 STMKIKXIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 385
Score = 71.2 bits (173), Expect(3) = e-117, Method: Compositional matrix adjust.
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -1
Query: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 174
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPH
Sbjct: 1094 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPH 993
>12322
Length = 849
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 151/218 (69%), Gaps = 1/218 (0%)
Frame = +1
Query: 160 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCY 219
VTH VP+YEG+A+PH+I+R+D+AGRD+T YL +L + G + TTAE E+V+ +KE+ CY
Sbjct: 1 VTHAVPVYEGFAMPHSIMRVDVAGRDVTRYLRLLLRKEGMDLHTTAEFEVVKHIKERTCY 180
Query: 220 VALD-FEQEMVTAAASSSLERSYELPDGQVITIGNERFRCPEAIFQPSFLGIESRGIHET 278
++++ ++E V S Y LPDG + +G RFR PE +F+P +G E GIHE
Sbjct: 181 LSINPLKEESVDTEKVS-----YTLPDGNTVEVGPARFRAPELLFRPDLIGEECEGIHEV 345
Query: 279 TFNSIMKCDVDIRKDLFANTVLSGGSTMYPGIADRMQKEIVTLAPSTMKIKIIAPPERKY 338
SI K DVD+RK L++N VLSGGST++ G DR+ E+ LAP +KI+I AP ER Y
Sbjct: 346 LSYSIQKSDVDLRKTLYSNIVLSGGSTLFKGFGDRLLSELKKLAPKDIKIRISAPQERLY 525
Query: 339 SVWIGGSILASLSTFQQMWISKQEYDEAGPPIVHRKCF 376
S WIG SILASL TF++MW+SK+EY E G +HRK F
Sbjct: 526 STWIGXSILASLDTFRKMWVSKREYHEEGVKAIHRKTF 639
>00608
Length = 1930
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 178/333 (53%), Gaps = 32/333 (9%)
Frame = +3
Query: 76 VVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQIMFEAFNTPAMYV 135
++ +WD ME+ + + LR P++H LLTE PLN NRE +IMFE+FN P +Y+
Sbjct: 3 IIDDWDLMERFYEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI 182
Query: 136 AIQAVLSLYASGRT--------TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
A+QAVL+L AS + TG V+DSGDGVTH +P+ EGY + I + +AGRD+T
Sbjct: 183 AVQAVLALAASWTSRNVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 362
Query: 188 DYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAAS-SSLERSYELPD- 245
++ ++L ER E + +KE+ YV D +E S + YE +
Sbjct: 363 YFIQQLLREREVGIPPEQSLETAKAIKERFSYVCPDIAKEFSKYDTDPSKWMKKYEGRNT 542
Query: 246 --GQVIT--IGNERFRCPEAIFQPSFLGIE-SRGIHETTFNSIMKCDVDIRKDLFANTVL 300
Q+ + +G ERF PE F P F + + I + + I C +D+R+ L+ N VL
Sbjct: 543 ISKQLFSVDVGYERFLGPEIFFHPEFSNPDFTMPISDVVDDVIQNCPIDVRRGLYKNIVL 722
Query: 301 SGGSTMYPGIADRMQKEIV----------------TLAPSTMKIKIIAPPERKYSVWIGG 344
SGGSTM+ ++Q+++ + P +++++I ++Y+VW GG
Sbjct: 723 SGGSTMFRDFGRKIQRDVKRVVDGRLKASEELSQGRIKPKPIEVQVITHHMQRYAVWFGG 902
Query: 345 SILASLSTFQQMWISKQEYDEAGPPIV-HRKCF 376
S+LAS F Q+ +K +YDE GP I H F
Sbjct: 903 SMLASTPEFYQVCHTKADYDEHGPSICRHNPVF 1001
>01436
Length = 2563
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 121/200 (60%), Gaps = 12/200 (6%)
Frame = +3
Query: 186 LTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERSYELPD 245
+T YL+K+L RGY F +A+ E VR +KEKLCY A D EQE A ++ L Y LPD
Sbjct: 3 ITRYLIKLLLLRGYAFNHSADFETVRMLKEKLCYTAYDVEQEQKLALETTVLVEPYILPD 182
Query: 246 GQVITIGNERFRCPEAIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLFANTVLSGGST 305
G+VI +G ERF PEA+FQP + ++ G+ E FN+I D+DIR D + + VLSGGST
Sbjct: 183 GRVIKVGGERFEAPEALFQPHLINVDGVGVAELLFNTIQAADMDIRPDFYKHIVLSGGST 362
Query: 306 MYPGIADRMQKEIVTL-----------APSTMKIKIIAPPERKYSVWIGGSILAS-LSTF 353
MYPG+ R+++EI L S KI+I PP RK+ V++GGS+ A +
Sbjct: 363 MYPGLPSRLEREIKQLYLERVLXGDTSRLSKFKIRIEDPPRRKHMVFLGGSVXADIMKDK 542
Query: 354 QQMWISKQEYDEAGPPIVHR 373
W+ + EY+E G ++ +
Sbjct: 543 DDFWMMRSEYEEMGVKVLDK 602
>11487
Length = 771
Score = 94.0 bits (232), Expect(3) = 2e-40, Method: Compositional matrix adjust.
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = -2
Query: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPIVHRKCF 376
PERKYSVWIGGSILASLSTFQQMWISKQEYDE+GP IVHRKCF
Sbjct: 602 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 474
Score = 81.6 bits (200), Expect(3) = 2e-40, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = -1
Query: 277 ETTFNSIMKCDVDIRKDLFANTVLSGGSTMYPGIADRMQKE 317
ET +NSIMKCDVDIRKDL+ANTVLSGG+TM+PGIADRMQKE
Sbjct: 771 ETAYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKE 649
Score = 28.5 bits (62), Expect(3) = 2e-40, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 316 KEIVTLAPSTMKIKIIAP 333
+ I LAP TMKIKIIAP
Sbjct: 655 ERITALAPPTMKIKIIAP 602
>19721
Length = 757
Score = 96.3 bits (238), Expect(2) = 4e-30, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 75/120 (62%), Gaps = 8/120 (6%)
Frame = +2
Query: 76 VVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQIMFEAFNTPAMYV 135
VV +WD E+ + LR P++H LLTE PLN NRE +IMFE FN P +Y+
Sbjct: 2 VVEDWDLHERFMEQAIFKYLRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNIPGLYI 181
Query: 136 AIQAVLSLYASGRT--------TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
A+QAVL+L AS + TG V+DSGDGVTH +P+ +GY + AI + +AGRD+T
Sbjct: 182 AVQAVLALAASWTSRPPNERTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDIT 361
Score = 53.1 bits (126), Expect(2) = 4e-30, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Frame = +3
Query: 208 EIVRDVKEKLCYVALDFEQEMVTAAA-------SSSLERSYELPDGQVITIGNERFRCPE 260
E + +KE+ YV D +E + + + S + PD +G E+F PE
Sbjct: 420 EAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKAHKMSGSSKYPDFS-FDVGYEKFLGPE 596
Query: 261 AIFQPSFL-GIESRGIHETTFNSIMKCDVDIRKDLFANTVLSGGSTMY 307
F+P F+ G I + I C +D R+ L+ N VLSGGS+M+
Sbjct: 597 VFFRPEFVNGDFQASISDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMF 740
>36954
Length = 892
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Frame = -1
Query: 4 DELTALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSKR 63
DE+ ALV D GS +AG+ G+D P+A P+ VG + D E +
Sbjct: 817 DEVGALVFDIGSYSFRAGYAGEDTPKAEIPTHVGVMEDIETTMDTDGGDAPPQPEKKYLI 638
Query: 64 GILTLKYP---------IEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPK 114
+ +K+P ++ G+V +WD EK+ + + ++ HP+L++E N K
Sbjct: 637 DTVYMKHPRKGMHLNSFLKDGMVEDWDMFEKVIDYAYNRSIKSESCLHPLLMSEPAWNTK 458
Query: 115 INREKMTQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 174
REK+T+IMFE +N PA ++ +VLS +A+GR+T +++DSG T VP+Y+GY L
Sbjct: 457 AKREKLTEIMFEKYNIPAFFLRKNSVLSAFANGRSTALILDSGATHTSAVPVYDGYVLTQ 278
Query: 175 AILRLDLAG 183
I++ LAG
Sbjct: 277 GIVKSPLAG 251
>32273
Length = 265
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Frame = -2
Query: 65 ILTLKYPIEHGVVTNWDDMEKIWYHTF-YNELRVAPDEHPILLTEAPLNPKINREKMTQI 123
+++++YP+EHG+V +W+DME+IW + + ++L+ +EHP+LLTEAPLNP+ NREK +I
Sbjct: 264 LMSIRYPMEHGIVKDWNDMERIWQYIYSKDQLQTFSEEHPVLLTEAPLNPRRNREKAAEI 85
Query: 124 MFEAFNTPAMYVAIQAVLSLYASGRTTG 151
F+ FN PA+++++QAVLSLYA+GR TG
Sbjct: 84 FFDTFNVPALFISMQAVLSLYATGRITG 1
>18926
Length = 478
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Frame = +1
Query: 274 GIHETTFNSIMKCDVDIRKDLFANTVLSGGSTMYPGIADRMQKEIVTLAPSTMKIKIIAP 333
G+ S+ CD+DIR L+ + GG+++ G +R+ +++ P +M++KIIA
Sbjct: 97 GVGHVVTTSVGMCDIDIRPSLYGGVIAVGGNSLIQGFTERLNRDLSNKTPPSMRLKIIAA 276
Query: 334 P---ERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPIVHRKC 375
ER++S WIGGSILASL +FQQMW+SKQEY+E G V RKC
Sbjct: 277 ASTAERRFSSWIGGSILASLGSFQQMWVSKQEYEEGGKSCVERKC 411
>13361
Length = 1217
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Frame = +3
Query: 218 CYVALDFEQEMVTA-AASSSLERSYE-----LPDGQVITIGNERFRCPEAIFQPSFLGIE 271
CY+ D +E + S R+Y + +G ERF PE F P F +
Sbjct: 42 CYICPDIAKEFAKYDSEPSKWIRNYTGMNTVTKQAFNVDVGYERFLGPEIFFHPEFSNPD 221
Query: 272 -SRGIHETTFNSIMKCDVDIRKDLFANTVLSGGSTMYPGIADRMQKEIV----------- 319
+ + E N I C +D+R+ L+ N VLSGGSTM+ R+Q++I
Sbjct: 222 FTIPLSEIVDNVIQNCPIDVRRHLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISE 401
Query: 320 -----TLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPI 370
+ P + +++I ++Y+VW GGS+LAS F Q+ +K Y+E GP I
Sbjct: 402 NLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYGPSI 569
>17032
Length = 2938
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -1
Query: 342 IGGSILASLSTFQQMWISKQEYDEAGPPIV 371
GGS+LAS F Q+ +K +YDE GP I
Sbjct: 2938 FGGSMLASTPEFYQVCHTKADYDEHGPSIC 2849
>06132
Length = 1490
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Frame = -2
Query: 221 ALDFEQEMVTAAASSSLERSYELPDGQVITIGNERFRCPEAIFQPSF-------LGIESR 273
AL F+Q M T +S R Y P+ + +T+G P Q + LG+
Sbjct: 1015 ALLFQQLMCTTLEKNSHHRLYVSPNHRKLTLGCPVLMLPHDARQDMY*NANCYVLGMTQL 836
Query: 274 GIHETTF 280
GI TTF
Sbjct: 835 GIELTTF 815
>06084
Length = 1739
Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 323 PSTMKIKIIA--PPERKYSVWIGGSILASLS 351
PS + + + P+RKY VW+ G I SLS
Sbjct: 942 PSNLSTQFYSQYKPQRKYGVWVRGGITRSLS 1034
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981828|ref|NP_034068.2| coatomer protein complex
subunit alpha [Mus musculus]
(1224 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10824 569 0.0
28855 83 5e-23
30256 86 7e-17
02147 75 1e-13
19949 74 5e-13
27465 72 1e-12
12806 68 2e-11
13335 68 2e-11
17598 66 9e-11
00561 65 2e-10
12574 64 6e-10
26939 61 3e-09
37180 60 4e-09
01327 59 1e-08
17602 57 5e-08
21105 55 1e-07
03156 55 1e-07
03387 55 2e-07
27806 54 3e-07
15118 50 5e-06
19498 49 8e-06
12960 49 2e-05
14555 38 2e-05
20662 47 6e-05
19863 47 7e-05
18981 45 1e-04
01462 44 5e-04
02960 42 0.001
21763 42 0.001
19140 42 0.001
03395 42 0.001
01768 42 0.002
13278 42 0.002
00825 41 0.003
01805 41 0.003
15780 40 0.004
21960 40 0.007
16199 39 0.016
17266 38 0.019
20271 38 0.020
14500 38 0.032
16105 37 0.038
33180 33 0.092
02090 35 0.13
26107 35 0.13
21921 35 0.13
17298 35 0.15
04358 35 0.16
28403 35 0.24
15337 35 0.27
04524 34 0.38
31474 33 0.57
10264 33 0.60
31864 33 0.99
10162 32 1.1
06576 32 1.1
05493 32 1.4
31054 32 1.8
12140 32 1.8
38177 32 2.3
04088 31 2.8
01598 31 3.2
36111 31 3.4
13509 30 4.0
25880 30 4.9
01249 30 7.1
07781 30 7.1
30297 30 7.7
11915 29 9.8
>10824
Length = 1751
Score = 569 bits (1466), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 277/390 (71%), Positives = 315/390 (80%), Gaps = 1/390 (0%)
Frame = -3
Query: 836 DIDTVGTEGWGEDAELQLDEDGFVEAPEGLGEDVLGKGQEEGGGWXXXXXXXXXXXXXXX 895
D V GWG DAEL LDEDG A EG E+ + G EGG W
Sbjct: 1458 DWRMVQERGWGADAELVLDEDGGFGA-EGFEEEGVTGGDAEGGAWDVEDEDLELPPDLDV 1282
Query: 896 SGV-SGSAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGP 954
+G+ E+G+FVPPTKGTS Q+WCNNSQLPVDH+LAGSFETAMRLLHDQVGV+QF
Sbjct: 1281 GATATGAGEEGYFVPPTKGTSQAQVWCNNSQLPVDHVLAGSFETAMRLLHDQVGVVQFDQ 1102
Query: 955 YKQLFLQTYARGRTTYQALPCLPSMYSYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCY 1014
YKQLFLQTY+R RT+Y LP LP ++ +P+RNWK+AG ++G+PAVG+KLN L+Q+LQ Y
Sbjct: 1101 YKQLFLQTYSRARTSYLGLPSLPPLFGFPHRNWKEAGGRSGMPAVGMKLNTLVQQLQTAY 922
Query: 1015 QLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLCMEIERKKLP 1074
QLTT GKF EA ++FRSILLSVPLLVVD+KQEIAEAQQLI ICREYI+GL ME +RK+LP
Sbjct: 921 QLTTTGKFAEAGDRFRSILLSVPLLVVDSKQEIAEAQQLIEICREYILGLHMESKRKELP 742
Query: 1075 KETLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPK 1134
K TLDQQKR CEMAAYFTH NLQPVHMIL LRTALNLFFKLKNFKTAA+FARRLLELGPK
Sbjct: 741 KGTLDQQKRQCEMAAYFTHCNLQPVHMILTLRTALNLFFKLKNFKTAASFARRLLELGPK 562
Query: 1135 PEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSP 1194
PEVAQQTRKIL+ACEKNPTD +L YD HNPFD+CAAS+ PIYRGKPV KCPLSGACY P
Sbjct: 561 PEVAQQTRKILAACEKNPTDEHELKYDQHNPFDVCAASFVPIYRGKPVVKCPLSGACYLP 382
Query: 1195 EFKGQICRVTTVTEIGKDVIGLRISPLQFR 1224
E+KG++C ++ VTEIGKD IGLRIS LQFR
Sbjct: 381 EYKGEVCXISKVTEIGKDCIGLRISTLQFR 292
Score = 121 bits (303), Expect(2) = 0.0, Method: Composition-based stats.
Identities = 66/98 (67%), Positives = 81/98 (82%)
Frame = -2
Query: 739 LGDVSERVRILKNYGQKSLAYLSAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPP 798
LGDV ERV+ILKN GQKSLAYL+AATHGL EEAE LKE+F E+E +PD+ P A+LLQPP
Sbjct: 1750 LGDVPERVKILKNCGQKSLAYLTAATHGLQEEAEELKESFG-EEEKVPDLYPGARLLQPP 1574
Query: 799 APIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADID 836
P+ + NWPLLTVSKGFFEG++A++GK ALAA ++
Sbjct: 1573 PPLCLQEQNWPLLTVSKGFFEGAMAARGKPSALAAAVE 1460
>28855
Length = 370
Score = 83.2 bits (204), Expect(2) = 5e-23, Method: Composition-based stats.
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +2
Query: 905 GFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGV 949
G P +GTS Q+WCNNSQLPVDH+LAGSFETAMRLLHDQVGV
Sbjct: 158 GLLRSPNQGTSQAQVWCNNSQLPVDHVLAGSFETAMRLLHDQVGV 292
Score = 44.3 bits (103), Expect(2) = 5e-23, Method: Composition-based stats.
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 948 GVIQFGPYKQLFLQTYARGRTTYQALP 974
G +QF YKQLFLQTY+R RT+Y LP
Sbjct: 286 GGVQFDQYKQLFLQTYSRARTSYLGLP 366
>30256
Length = 961
Score = 86.3 bits (212), Expect = 7e-17, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 94/221 (42%)
Frame = +3
Query: 67 VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRT 126
+SG D +KVWN C TL GH +R + ++S S D T+RVW+ +S
Sbjct: 84 ISGSTDRSLKVWNADTGVCTHTLYGHSSTVRCLSLSGKK--VVSGSRDATLRVWDIESGH 257
Query: 127 CVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITG 186
C+ VL GH V C Q+ VVS + D TVRVWD
Sbjct: 258 CLNVLLGHMAAVRCVQYDGKR--VVSGAXDYTVRVWD----------------------- 362
Query: 187 VDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCR 246
A H L+GH V F +VSG+ D +++W + K V T
Sbjct: 363 -----PDTASCLHTLQGHTNRVYSLQFDGVY--VVSGSLDTSIRVWDVRCGKL--VHTLM 515
Query: 247 GHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTF 287
GH + S + L++S + D +++VWD+ +QT
Sbjct: 516 GHQSLTSG--LELKDNLLVSGNADSTVKVWDVHTGKCLQTL 632
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Frame = +3
Query: 2 LTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHK 61
L + + RV L F ++++ + I++WD R L+ H G++
Sbjct: 381 LHTLQGHTNRVYSLQF--DGVYVVSGSLDTSIRVWDVRCGKLVHTLMGHQSLTSGLEL-- 548
Query: 62 QQPLFVSGGDDYKIKVWNYKLRRCLFTLLG---HLDYIRTTFFHHEYPWILSASDDQTIR 118
+ L VSG D +KVW+ +CL TLLG H + F+ ++ +++ SDD T++
Sbjct: 549 KDNLLVSGNADSTVKVWDVHTGKCLQTLLGPNKHRSAVTCLQFNKKF--VVTCSDDGTVK 722
Query: 119 VWN 121
+W+
Sbjct: 723 LWD 731
>02147
Length = 1547
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 111/249 (44%), Gaps = 13/249 (5%)
Frame = +2
Query: 44 IDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH 103
I F+ H G V G +++ +G D+ K+W+ + L T H +++ F H
Sbjct: 152 IGTFEGHKGAVWGATLNREATRAATGAADFSAKIWDAEKGEELQTF-SHKHIVKSVDFSH 328
Query: 104 EYPWILSASDDQTIRVWNW-QSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
+ +L+ S+++ ++V++ + GH + A F ++SAS D+TVR+W
Sbjct: 329 DGTALLTGSNEKLLKVFDLVNTDAEPKSFAGHTSNIKGALFLSDGKRIISASDDKTVRLW 508
Query: 163 DISGLRKK------------NLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNW 210
+ ++ LSP V + + D + + + ++
Sbjct: 509 SLETCQEVQQLTFDTPPTSLTLSPDKNTIIVTHSQNIAFY-QADTLREMKKFEAEAPISS 685
Query: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270
A+ H + V+G +D K+++ + E+++ +GH+ V C F P EL S SED
Sbjct: 686 ASLHQSERFFVAGGED--FKMYKFDYETGKEIESFKGHFGPVHCVRFSPDGELYASGSED 859
Query: 271 KSIRVWDMS 279
++R+W +
Sbjct: 860 GTLRLWQTT 886
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Frame = +2
Query: 15 LSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYK 74
L+ P + I+ + H+ I + + KF E + P+ H+ + FV+GG+D+K
Sbjct: 566 LTLSPDKNTIIVT-HSQNIAFYQADTLREMKKF-EAEAPISSASLHQSERFFVAGGEDFK 739
Query: 75 IKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWN 121
+ ++Y+ + + + GH + F + S S+D T+R+W
Sbjct: 740 MYKFDYETGKEIESFKGHFGPVHCVRFSPDGELYASGSEDGTLRLWQ 880
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 21/238 (8%)
Frame = +2
Query: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
+++G++++ +K++ + + A E + GH +N+ A+F + I+S S+DK++R+W +
Sbjct: 341 LLTGSNEKLLKVFDLVNTDA-EPKSFAGHTSNIKGALFLSDGKRIISASDDKTVRLWSLE 517
Query: 280 KRTGVQTFRRDH---------DRFWVLAAHP-NLNLFAAGHDGGMIVFKLERERPAYAVH 329
VQ D D+ ++ H N+ + A M F+ E + ++H
Sbjct: 518 TCQEVQQLTFDTPPTSLTLSPDKNTIIVTHSQNIAFYQADTLREMKKFEAEAPISSASLH 697
Query: 330 GNMLHYV---KDRFLRQLDFNSSKDVAVMQLRSSSKFPVFNMSYNPAENAVLLCTRASNL 386
+ +V +D + + D+ + K++ + PV + ++P + L
Sbjct: 698 QSERFFVAGGEDFKMYKFDYETGKEIESFKGHFG---PVHCVRFSPDGELYASGSEDGTL 868
Query: 387 E------NSTYDLY--TIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLL 436
TY L+ IP +AD+QN P+ K S T R+ R+HS L
Sbjct: 869 RLWQTTIGRTYGLWKCVIPDEADAQNS-TPDVKAES*WTGR-SDRDVXTAHTRLHSGL 1036
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +2
Query: 2 LTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHK 61
+ KFE + A + S H + + + + +DY I+ F H GPV + F
Sbjct: 650 MKKFEAE-APISSASLHQSERFFVAGGEDFKMYKFDYETGKEIESFKGHFGPVHCVRFSP 826
Query: 62 QQPLFVSGGDDYKIKVWNYKLRRC 85
L+ SG +D +++W + R
Sbjct: 827 DGELYASGSEDGTLRLWQTTIGRT 898
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +2
Query: 242 VDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP 301
+ T GH V A + + + D S ++WD K +QTF H V +H
Sbjct: 152 IGTFEGHKGAVWGATLNREATRAATGAADFSAKIWDAEKGEELQTFSHKHIVKSVDFSHD 331
Query: 302 NLNLFAAGHDGGMIVFKL---ERERPAYAVH 329
L ++ + VF L + E ++A H
Sbjct: 332 GTALLTGSNEKLLKVFDLVNTDAEPKSFAGH 424
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 1169 CAASYRPIYRGKPVEKCPLSGACYSPEFKGQICR 1202
C S RP+ G+P K G+CY+P K + R
Sbjct: 1158 CRHSGRPLPGGRPFNKLLSCGSCYTPVVKRHLSR 1057
>19949
Length = 903
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%)
Frame = +2
Query: 54 VRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
V+ +DFH SG D +K+W+ + + C++T GH + F + WI SAS+
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASE 181
Query: 114 DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
D +++W+ + + L H V +FHP E L+ S S D+TV+ WD+
Sbjct: 182 DGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDL 334
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%)
Frame = +2
Query: 96 IRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL 155
+++ FH + S S D +++W+ + + C+ GH V C +F P + SAS
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASE 181
Query: 156 DQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 215
D V++WD L+ G + +D L+ H VN FHP
Sbjct: 182 DGLVKLWD--------LTAGKLLTD--------------------LKLHRDAVNTIEFHP 277
Query: 216 TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270
L+ SG+ DR VK W + + + T N++ +FHP + S S+D
Sbjct: 278 HEFLLASGSADRTVKFWDLETFQL--ISTTEPEANSIRSILFHPDGVCLYSGSKD 436
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Frame = +2
Query: 12 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 71
VK L FHP + + + ++LWD R I + H G V + F S +
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASE 181
Query: 72 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRVWNWQSRTCVCV 130
D +K+W+ + L L H D + T FH HE+ + S S D+T++ W+ ++ +
Sbjct: 182 DGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEF-LLASGSADRTVKFWDLETFQLIST 358
Query: 131 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
+ + FHP + S S D T++V+
Sbjct: 359 TEPEANSIRSILFHPDGVCLYSGSKD-TLKVY 451
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%)
Frame = +2
Query: 138 VMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVV 197
V FHP S S+D V++WDI R+K G +
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDI---RRK----GCI-------------------- 100
Query: 198 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 257
+ +GH V F P I S ++D VK+W + K + + H + V+ F
Sbjct: 101 -YTYKGHTGCVCCLRFSPDGRWIASASEDGLVKLWDLTAGKL--LTDLKLHRDAVNTIEF 271
Query: 258 HPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVF 317
HP + L+ S S D++++ WD+ + T + + + HP+ +G + V+
Sbjct: 272 HPHEFLLASGSADRTVKFWDLETFQLISTTEPEANSIRSILFHPDGVCLYSGSKDTLKVY 451
Query: 318 KLE 320
E
Sbjct: 452 HWE 460
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 34/81 (41%)
Frame = +2
Query: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
+LT + V + FHP + + + ++ WD LI + +R I FH
Sbjct: 221 LLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDLETFQLISTTEPEANSIRSILFH 400
Query: 61 KQQPLFVSGGDDYKIKVWNYK 81
SG D +KV++++
Sbjct: 401 PDGVCLYSGSKD-TLKVYHWE 460
>27465
Length = 658
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = -1
Query: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY-PWI 108
H P+ + F+K F++G D K+W+ L TL GH + + F++ + +
Sbjct: 364 HILPLTNVAFNKSGSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAFNNPFGDKV 185
Query: 109 LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR 168
++ S D+T ++W+ C L GH ++C F+PS L+ + S+D T R+WD+ +
Sbjct: 184 ITGSFDKTCKLWSTADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCRLWDVEKAQ 5
Query: 169 K 169
+
Sbjct: 4 R 2
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Frame = -1
Query: 130 VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
VL H + F+ S ++ S D+T ++WD
Sbjct: 376 VLRAHILPLTNVAFNKSGSSFITGSYDRTCKIWD-------------------------- 275
Query: 190 FGTTDAVVKHVLEGHDRGVNWAAFH-PTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGH 248
T A H LEGH V AF+ P +++G+ D+ K+W + K + T RGH
Sbjct: 274 --TASAEELHTLEGHRNVVYAIAFNNPFGDKVITGSFDKTCKLWSTADGKCYH--TLRGH 107
Query: 249 YNNVSCAVFHPRQELILSNSEDKSIRVWDMSK 280
+ C F+P LI + S D + R+WD+ K
Sbjct: 106 TAEIVCVSFNPSSTLIATGSMDTTCRLWDVEK 11
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 11/175 (6%)
Frame = -1
Query: 75 IKVWNYKLRRC---------LFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQS 124
+K W + R+ LF +L H+ + F+ ++ S D+T ++W+ S
Sbjct: 445 VKNWCFACRKTRPKDDHHFYLFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKIWDTAS 266
Query: 125 RTCVCVLTGHNHYVMCAQF-HPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG 183
+ L GH + V F +P D V++ S D+T ++W
Sbjct: 265 AEELHTLEGHRNVVYAIAFNNPFGDKVITGSFDKTCKLW--------------------- 149
Query: 184 ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
T D H L GH + +F+P+ LI +G+ D ++W + +++
Sbjct: 148 -------STADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCRLWDVEKAQ 5
>12806
Length = 961
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Frame = +3
Query: 12 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 71
+ L+ + L+S + ++LWD + + +F H V + F SGG
Sbjct: 174 ISDLALSADSRFALSSSWDATLRLWDIKKGSTTSRFINHTRDVLTVAFSPDNRQIASGGR 353
Query: 72 DYKIKVWNYKLRRCLFTL--LGHLDYIRTTFFHHEY--PWILSASDDQTIRVWNWQSRTC 127
D +K+WN + C +T+ H D++ FH + P ++SAS+D+TI+VW+ + T
Sbjct: 354 DKNLKIWNI-MGECKYTVDANAHTDWVTCVRFHQDTKNPIVVSASNDKTIKVWDNHTMTL 530
Query: 128 VCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS 165
GH + S + +VS S D W+++
Sbjct: 531 KNTFVGHKAQITALDM--STNYLVSGSKDGIAMTWNVA 638
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 12/182 (6%)
Frame = +3
Query: 63 QPLFVSGGDDYKIKVWNYKLRR----------CLFTLLGHLDYIRTTFFHHEYPWILSAS 112
+P +SGG D I VW+ ++ TL GH +I + + LS+S
Sbjct: 45 KPFLISGGRDNNIIVWDL*PKKDGDEDQTWGVPRKTLTGHSHFISDLALSADSRFALSSS 224
Query: 113 DDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 172
D T+R+W+ + + H V+ F P + S D+ +++W+I G K +
Sbjct: 225 WDATLRLWDIKKGSTTSRFINHTRDVLTVAFSPDNRQIASGGRDKNLKIWNIMGECKYTV 404
Query: 173 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTM--PLIVSGADDRQVK 230
A H V FH P++VS ++D+ +K
Sbjct: 405 DANA---------------------------HTDWVTCVRFHQDTKNPIVVSASNDKTIK 503
Query: 231 IW 232
+W
Sbjct: 504 VW 509
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Frame = +3
Query: 216 TMPLIVSGADDRQVKIWRM------NESKAWEV--DTCRGHYNNVSCAVFHPRQELILSN 267
T P ++SG D + +W + +E + W V T GH + +S LS+
Sbjct: 42 TKPFLISGGRDNNIIVWDL*PKKDGDEDQTWGVPRKTLTGHSHFISDLALSADSRFALSS 221
Query: 268 SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP-NLNLFAAGHDGGMIVFKLERERPAY 326
S D ++R+WD+ K + F +A P N + + G D + ++ + E Y
Sbjct: 222 SWDATLRLWDIKKGSTTSRFINHTRDVLTVAFSPDNRQIASGGRDKNLKIWNIMGE-CKY 398
Query: 327 AVHGN 331
V N
Sbjct: 399 TVDAN 413
>13335
Length = 863
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 19/233 (8%)
Frame = +1
Query: 96 IRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL 155
IR F ++S SDD TI +W ++ V GH VM + P+ +VS S
Sbjct: 70 IRVCKFSPSSSHLVSGSDDDTICMWEVATQKLVRSYVGHEDSVMALAYSPNGHYLVSGSP 249
Query: 156 DQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 215
+ + VWD S FG + V + HD GV F P
Sbjct: 250 NGDLYVWDAS------------------------FGHCRHLTLRV-DAHDLGVTCCEFSP 354
Query: 216 TMP------------LIVSGADDRQVKIWRMN-ESKAWEV-----DTCRGHYNNVSCAVF 257
T L+ +G D +K+W + + + EV D GH + V F
Sbjct: 355 TFGTACAENSSTCNLLLATGGKDNLIKLWTFSAQVGSPEVTLQCRDILSGHSDLVMACAF 534
Query: 258 HPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP-NLNLFAAG 309
P L+ S S DKS+R+WD K + + H RF A + L A+G
Sbjct: 535 SPSSALLASGSFDKSVRLWDSVKGVALFSIEACHSRFVTCCAFSIDGTLLASG 693
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 110/270 (40%), Gaps = 17/270 (6%)
Frame = +1
Query: 33 IQLWDYRMCTLIDKFDEHD-GPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLG 91
+ +WD + ++ ++ +R F VSG DD I +W ++ + + +G
Sbjct: 4 VIVWDVKTGSIKGEYQHASKSSIRVCKFSPSSSHLVSGSDDDTICMWEVATQKLVRSYVG 183
Query: 92 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC---VCVLTGHNHYVMCAQFHPS-- 146
H D + + +++S S + + VW+ C + H+ V C +F P+
Sbjct: 184 HEDSVMALAYSPNGHYLVSGSPNGDLYVWDASFGHCRHLTLRVDAHDLGVTCCEFSPTFG 363
Query: 147 ----------EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAV 196
L+ + D +++W S G+ E ++
Sbjct: 364 TACAENSSTCNLLLATGGKDNLIKLWTFSA------QVGSPEVTLQ-------------- 483
Query: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKA-WEVDTCRGHYNNVSCA 255
+ +L GH V AF P+ L+ SG+ D+ V++W + A + ++ C H V+C
Sbjct: 484 CRDILSGHSDLVMACAFSPSSALLASGSFDKSVRLWDSVKGVALFSIEAC--HSRFVTCC 657
Query: 256 VFHPRQELILSNSEDKSIRVWDMSKRTGVQ 285
F L+ S S D+ I++W ++ + +
Sbjct: 658 AFSIDGTLLASGSMDRIIKIWKLTDTSSIM 747
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 96/253 (37%), Gaps = 23/253 (9%)
Frame = +1
Query: 10 ARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
+ ++ F P +++ + I +W+ L+ + H+ V + + VSG
Sbjct: 64 SSIRVCKFSPSSSHLVSGSDDDTICMWEVATQKLVRSYVGHEDSVMALAYSPNGHYLVSG 243
Query: 70 GDDYKIKVWNYKLRRCLFTLL---GHLDYIRTTFFHHEYP------------WILSASDD 114
+ + VW+ C L H + F + + + D
Sbjct: 244 SPNGDLYVWDASFGHCRHLTLRVDAHDLGVTCCEFSPTFGTACAENSSTCNLLLATGGKD 423
Query: 115 QTIRVWNWQSRT--------CVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG 166
I++W + ++ C +L+GH+ VM F PS L+ S S D++VR+WD
Sbjct: 424 NLIKLWTFSAQVGSPEVTLQCRDILSGHSDLVMACAFSPSSALLASGSFDKSVRLWD--- 594
Query: 167 LRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADD 226
+ GV LF + H R V AF L+ SG+ D
Sbjct: 595 ----------------SVKGVALFS--------IEACHSRFVTCCAFSIDGTLLASGSMD 702
Query: 227 RQVKIWRMNESKA 239
R +KIW++ ++ +
Sbjct: 703 RIIKIWKLTDTSS 741
>17598
Length = 875
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Frame = +1
Query: 12 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 71
V +S ++L+S + ++LWD + +F H + F SGG
Sbjct: 130 VSDVSLSADSRYVLSSSWDATLRLWDIKKGNTTRRFISHTRDALAVAFSPDNRQIASGGR 309
Query: 72 DYKIKVWNYKLRRCLFTLLG--HLDYIRTTFFHHE--YPWILSASDDQTIRVWNWQSRTC 127
D +K+WN + C FT+ H D++ FH + P ++SAS D+TI+VW+ Q+ T
Sbjct: 310 DKALKIWN-TVGECKFTVDANSHQDWVTCVKFHQDAKSPLVVSASMDKTIKVWDNQTMTL 486
Query: 128 VCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
GH + + S S D V W+I
Sbjct: 487 KHTFVGHKTQINAIDLALKTYYLASGSKDGIVMTWNI 597
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Frame = +1
Query: 130 VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
L GH+H+V V+S+S D T+R+WDI +K N
Sbjct: 106 TLQGHSHFVSDVSLSADSRYVLSSSWDATLRLWDI---KKGN------------------ 222
Query: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 249
TT + H R AF P I SG D+ +KIW + VD H
Sbjct: 223 --TTRRFISHT-----RDALAVAFSPDNRQIASGGRDKALKIWNTVGECKFTVD-ANSHQ 378
Query: 250 NNVSCAVFH--PRQELILSNSEDKSIRVWDMSKRTGVQTF 287
+ V+C FH + L++S S DK+I+VWD T TF
Sbjct: 379 DWVTCVKFHQDAKSPLVVSASMDKTIKVWDNQTMTLKHTF 498
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 83/242 (34%), Gaps = 3/242 (1%)
Frame = +1
Query: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 109
H V + +S D +++W+ K + H F + I
Sbjct: 118 HSHFVSDVSLSADSRYVLSSSWDATLRLWDIKKGNTTRRFISHTRDALAVAFSPDNRQIA 297
Query: 110 SASDDQTIRVWNWQSRTCVCV-LTGHNHYVMCAQFH--PSEDLVVSASLDQTVRVWDISG 166
S D+ +++WN V H +V C +FH LVVSAS+D+T++VWD
Sbjct: 298 SGGRDKALKIWNTVGECKFTVDANSHQDWVTCVKFHQDAKSPLVVSASMDKTIKVWDNQT 477
Query: 167 LRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADD 226
+ +KH GH +N + SG+ D
Sbjct: 478 M----------------------------TLKHTFVGHKTQINAIDLALKTYYLASGSKD 573
Query: 227 RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQT 286
V W + C N V F P + + + + I++WD+ + ++
Sbjct: 574 GIVMTWNIQNGTFLGKIDCDCEVNAVK---FSPNKYWLFVGTSE-GIQIWDLPNQKKIKD 741
Query: 287 FR 288
R
Sbjct: 742 IR 747
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 10/176 (5%)
Frame = +1
Query: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWD-YRMCTLIDKFDEHDGPVRGIDFHK- 61
+F + + ++F P I + + +++W+ C + H V + FH+
Sbjct: 232 RFISHTRDALAVAFSPDNRQIASGGRDKALKIWNTVGECKFTVDANSHQDWVTCVKFHQD 411
Query: 62 -QQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
+ PL VS D IKVW+ + T +GH I + ++ S S D + W
Sbjct: 412 AKSPLVVSASMDKTIKVWDNQTMTLKHTFVGHKTQINAIDLALKTYYLASGSKDGIVMTW 591
Query: 121 NWQSRT------CVCVLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISGLRK 169
N Q+ T C C V +F P++ L V S + +++WD+ +K
Sbjct: 592 NIQNGTFLGKIDCDC-------EVNAVKFSPNKYWLFVGTS--EGIQIWDLPNQKK 732
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Frame = +1
Query: 219 LIVSGADDRQVKIWRM------NESKAW--EVDTCRGHYNNVSCAVFHPRQELILSNSED 270
++ G D+ + +W + +E + W T +GH + VS +LS+S D
Sbjct: 7 FLIXGGRDKLLIVWDLVPRKDGDEDETWGGPRRTLQGHSHFVSDVSLSADSRYVLSSSWD 186
Query: 271 KSIRVWDMSKRTGVQTF-RRDHDRFWVLAAHPNLNLFAAGHDGGMIVF 317
++R+WD+ K + F D V + N + + G D + ++
Sbjct: 187 ATLRLWDIKKGNTTRRFISHTRDALAVAFSPDNRQIASGGRDKALKIW 330
>00561
Length = 1003
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Frame = -3
Query: 32 VIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLL- 90
++LWD +F+ H V + F VSG D IK+WN L C FT+
Sbjct: 797 TLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLAECKFTIQE 621
Query: 91 -GHLDYIRTTFF--HHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE 147
GH D++ F +H P I+S D+T++VWN + GHN Y+ P
Sbjct: 620 DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDG 441
Query: 148 DLVVSASLDQTVRVWDIS 165
L S D +WD++
Sbjct: 440 SLCTSGGKDSKALLWDLN 387
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 91/240 (37%), Gaps = 4/240 (1%)
Frame = -3
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSED 148
L GH +I + + LS S DQT+R+W+ + GH V+ F
Sbjct: 878 LYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNR 699
Query: 149 LVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLE--GHDR 206
+VS S D+T+++W+ T A K ++ GH
Sbjct: 698 QIVSGSRDKTIKLWN-----------------------------TLAECKFTIQEDGHTD 606
Query: 207 GVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
V+ F P + P+IVS DR VK+W + K + GH ++ P L
Sbjct: 605 WVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKL--KNNHHGHNGYLNTVTVSPDGSLC 432
Query: 265 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERP 324
S +D +WD++ + T + D L PN + + ++ L ++P
Sbjct: 431 TSGGKDSKALLWDLNDGKNLYTLEHN-DIINALCFSPNRYWLCVAYGPSIKIWDLACKKP 255
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Frame = -3
Query: 148 DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG----ITGV--------DLFGTTDA 195
D ++SAS D+T+ VW ++ R ++ + G + + G I+ V L G+ D
Sbjct: 971 DTIISASRDKTLIVWKLT--RDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQ 798
Query: 196 VVK----------HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTC 245
++ EGH + V AF IVSG+ D+ +K+W + +
Sbjct: 797 TLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQE- 621
Query: 246 RGHYNNVSCAVFHPRQE--LILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNL 303
GH + VSC F P +I+S D++++VW+++ + + P+
Sbjct: 620 DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDG 441
Query: 304 NLF-AAGHDGGMIVFKLERERPAYAVHGN 331
+L + G D +++ L + Y + N
Sbjct: 440 SLCTSGGKDSKALLWDLNDGKNLYTLEHN 354
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Frame = -3
Query: 12 VKGLSFHPKR--PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSG 69
V + F P P I++ + +++W+ C L + H+G + + L SG
Sbjct: 602 VSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSG 423
Query: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWN 121
G D K +W+ + L+T L H D I F W+ A +I++W+
Sbjct: 422 GKDSKALLWDLNDGKNLYT-LEHNDIINALCFSPNRYWLCVAY-GPSIKIWD 273
>12574
Length = 521
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 52/106 (49%)
Frame = +3
Query: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 109
H + + F S D IK+W + T+ GH + + + +
Sbjct: 183 HTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAGHKLGLSDVAWSSDSKLLC 362
Query: 110 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL 155
SASDD+T+++W + + C+ L GH++YV C F+P +L+VS SL
Sbjct: 363 SASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNFNPQSNLIVSGSL 500
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 60/138 (43%)
Frame = +3
Query: 131 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLF 190
L GH + +F P+ D + S+S D+ +++W
Sbjct: 174 LAGHTKALSAVKFSPNGDWLASSSADKLIKIW---------------------------- 269
Query: 191 GTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYN 250
G D + + GH G++ A+ L+ S +DD+ +KIW + K + T +GH N
Sbjct: 270 GAYDGKFEKTIAGHKLGLSDVAWSSDSKLLCSASDDKTLKIWEFSTGKC--MKTLKGHSN 443
Query: 251 NVSCAVFHPRQELILSNS 268
V C F+P+ LI+S S
Sbjct: 444 YVFCCNFNPQSNLIVSGS 497
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +3
Query: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV 256
+K L GH + ++ F P + S + D+ +KIW + K + T GH +S
Sbjct: 162 LKFTLAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEK--TIAGHKLGLSDVA 335
Query: 257 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAG 309
+ +L+ S S+DK++++W+ S ++T + + + +P NL +G
Sbjct: 336 WSSDSKLLCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNFNPQSNLIVSG 494
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 54/138 (39%)
Frame = +3
Query: 87 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPS 146
FTL GH + F W+ S+S D+ I++W + GH + +
Sbjct: 168 FTLAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAGHKLGLSDVAWSSD 347
Query: 147 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 206
L+ SAS D+T+++W+ S T +K L+GH
Sbjct: 348 SKLLCSASDDKTLKIWEFS---------------------------TGKCMK-TLKGHSN 443
Query: 207 GVNWAAFHPTMPLIVSGA 224
V F+P LIVSG+
Sbjct: 444 YVFCCNFNPQSNLIVSGS 497
>26939
Length = 388
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = +2
Query: 107 WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
+++SASDD+TIRVW+ +++ C+ L H H+ FH + V+S S+DQTV+VW+
Sbjct: 8 YLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 178
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +2
Query: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
VS DD I+VW+ + +RC+ TL H + + FH +P+++S S DQT++VW
Sbjct: 11 LVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 175
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 23 WILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVW 78
+++++ + I++WD R + H IDFHK P +SG D +KVW
Sbjct: 8 YLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 175
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
+VS +DD+ +++W + + + T H + + FH ++S S D++++VW+
Sbjct: 11 LVSASDDKTIRVWDLRNKRC--MKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 178
>37180
Length = 681
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = +1
Query: 199 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 258
+VL GHD+ ++ HPT L+V+ + D ++W +S A V+ +GH V+ AVF
Sbjct: 1 NVLNGHDQELSDVHAHPTQRLVVTSSKDMTFRLWDFRDS-ALLVNVFQGHTQPVTSAVF- 174
Query: 259 PRQELILSNSEDKSIRVWDM-SKRTGVQTFRRD 290
+ ++S S+D+++RVWDM + R+ + T R D
Sbjct: 175 ASGDKVVSGSDDRTVRVWDMRNMRSPIATIRTD 273
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 50/110 (45%)
Frame = +1
Query: 130 VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
VL GH+ + HP++ LVV++S D T R+WD
Sbjct: 4 VLNGHDQELSDVHAHPTQRLVVTSSKDMTFRLWDFR------------------------ 111
Query: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKA 239
A++ +V +GH + V A F + +VSG+DDR V++W M ++
Sbjct: 112 ---DSALLVNVFQGHTQPVTSAVF-ASGDKVVSGSDDRTVRVWDMRNMRS 249
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 18 HPKRPWILTSLHNGVIQLWDYR-MCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIK 76
HP + ++TS + +LWD+R L++ F H PV F + VSG DD ++
Sbjct: 46 HPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSAVFASGDKV-VSGSDDRTVR 222
Query: 77 VWNYKLRR 84
VW+ + R
Sbjct: 223 VWDMRNMR 246
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWI 108
HD + + H Q L V+ D ++W+++ L + GH + + F +
Sbjct: 16 HDQELSDVHAHPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSAVFASGDK-V 192
Query: 109 LSASDDQTIRVWNWQS 124
+S SDD+T+RVW+ ++
Sbjct: 193 VSGSDDRTVRVWDMRN 240
>01327
Length = 2215
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 22/224 (9%)
Frame = +3
Query: 33 IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH 92
+ L+DY+ L D++ HD + + + S D IK+W + +GH
Sbjct: 111 VVLYDYQNGRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGH 290
Query: 93 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVS 152
+ + + + S S D T+R+W+ ++ C+ + V ++ P L++
Sbjct: 291 DMVVTAIHLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVKWLPGSHLIIQ 470
Query: 153 ASLDQTVRVWD------ISGLRKKNLSPGAVESDVRG---ITGVDLFGT----------T 193
A D+ VR++D + KK + + G +T + FG +
Sbjct: 471 AGEDKEVRIYDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGCEATLWQLS 650
Query: 194 DAVVKHVLEGHDRGVNWAAFHPT---MPLIVSGADDRQVKIWRM 234
D +++ +GH + F P+ M LI + + D V++W M
Sbjct: 651 DGSIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNM 782
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Frame = +3
Query: 62 QQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWN 121
Q L +SG D + +++Y+ R GH I + + SAS D+TI++W
Sbjct: 72 QPGLCLSGSKDKSVVLYDYQNGRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQ 251
Query: 122 WQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI---SGLRKKNLSPGAVE 178
+ + GH+ V + L+ S S D TVR+WD+ + LR+ N+ P +
Sbjct: 252 RGNSHSIRDFIGHDMVVTAIHLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNI-PQNLV 428
Query: 179 SDVRGITGVDLF--GTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVS-------------- 222
+DV+ + G L D V+ + + G+ +F + +S
Sbjct: 429 TDVKWLPGSHLIIQAGEDKEVR-IYDSRTLGIV-RSFTKKQYIQMSCDVTADGQFCLTCS 602
Query: 223 ---GADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE---LILSNSEDKSIRVW 276
G + + +W++++ + +GH + +F P + LI + S D S+RVW
Sbjct: 603 NGFGGNGCEATLWQLSDGSI--QNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVW 776
Query: 277 DM 278
+M
Sbjct: 777 NM 782
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 69 GGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFF---HHEYPWILSASDDQTIRVWNWQSR 125
GG+ + +W GH + I F + + I +AS D ++RVWN ++
Sbjct: 612 GGNGCEATLWQLSDGSIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNMFTK 791
Query: 126 TCVC 129
CVC
Sbjct: 792 ECVC 803
>17602
Length = 481
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Frame = +3
Query: 34 QLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHL 93
++WD + + H PV + F++ L VS D ++W+ +CL TL+
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDD- 179
Query: 94 DYIRTTF--FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNH--YVMCAQFHPSED- 148
D +F F +IL+A+ D T+++W++ C+ GH + Y + A F +
Sbjct: 180 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSVTGGK 359
Query: 149 LVVSASLDQTVRVWDI 164
+VS S D V +W++
Sbjct: 360 WIVSGSEDNMVYIWNL 407
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 76 KVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT-GH 134
++W+ K +CL TL H D + F+ + I+S+S D R+W+ S C+ L
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDD 182
Query: 135 NHYVMCAQFHPSEDLVVSASLDQTVRVWDIS 165
N V +F P+ +++A+LD T+++WD S
Sbjct: 183 NPPVSFVKFSPNGKYILAATLDNTLKLWDYS 275
Score = 50.4 bits (119), Expect(2) = 4e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Frame = +3
Query: 2 LTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR----MCTLIDKFDEHDGPVRGI 57
L S V + F+ I++S ++G+ ++WD + TLI D+ + PV +
Sbjct: 33 LKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLI---DDDNPPVSFV 203
Query: 58 DFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP---WILSASDD 114
F ++ D +K+W+Y +CL T +GH + F + WI+S S+D
Sbjct: 204 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSVTGGKWIVSGSED 383
Query: 115 QTIRVWN 121
+ +WN
Sbjct: 384 NMVYIWN 404
Score = 22.7 bits (47), Expect(2) = 4e-07, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 124 SRTCVCVLTGHNHYVMCAQFHPS 146
++ V L GH V+C HPS
Sbjct: 412 TKEIVQKLQGHTDVVLCCACHPS 480
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 3/164 (1%)
Frame = +3
Query: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
R+W+ ++ C+ L H+ V F+ L+VS+S D R+WD +
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTA------------ 146
Query: 178 ESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES 237
+ + +++ + V++ F P I++ D +K+W ++
Sbjct: 147 ---------------SGQCLXTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 281
Query: 238 KAWEVDTCRGHYNNVSCAVFH---PRQELILSNSEDKSIRVWDM 278
K + T GH N C + + I+S SED + +W++
Sbjct: 282 KC--LKTYVGHRNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNL 407
>21105
Length = 650
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Frame = +1
Query: 60 HKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 119
H P+ ++ +D I+ ++ + + ++ HLD + + ++LS S D +IR+
Sbjct: 91 HPTMPITITAHEDRHIRFFDNNTGKLIHAMVAHLDSVTSLAVDPNGLYLLSGSHDCSIRL 270
Query: 120 WNWQSRTCVCVLTGH----NHYVMCAQFHPSEDLVVSASLDQTVRVW 162
WN S+TCV +T H + + FHP + + SA D +V+
Sbjct: 271 WNLDSKTCVQEITSHRKKFDESIHDVAFHPQKPYIASAGADALAKVF 411
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +1
Query: 214 HPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSI 273
HPTMP+ ++ +DR ++ + N K + H ++V+ P +LS S D SI
Sbjct: 91 HPTMPITITAHEDRHIRFFDNNTGKL--IHAMVAHLDSVTSLAVDPNGLYLLSGSHDCSI 264
Query: 274 RVWDMSKRTGVQTFRRDHDRF----WVLAAHPNLNLFA-AGHDGGMIVF 317
R+W++ +T VQ +F +A HP A AG D VF
Sbjct: 265 RLWNLDSKTCVQEITSHRKKFDESIHDVAFHPQKPYIASAGADALAKVF 411
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 12 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEH----DGPVRGIDFHKQQPLFV 67
V L+ P ++L+ H+ I+LW+ T + + H D + + FH Q+P
Sbjct: 199 VTSLAVDPNGLYLLSGSHDCSIRLWNLDSKTCVQEITSHRKKFDESIHDVAFHPQKPYIA 378
Query: 68 SGGDDYKIKVW 78
S G D KV+
Sbjct: 379 SAGADALAKVF 411
>03156
Length = 1014
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Frame = +1
Query: 39 RMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRT 98
+M L D++ HD + + + S D IK+W + +GH +
Sbjct: 19 KMGRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGHDMVVTA 198
Query: 99 TFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQT 158
+ + + S S D T+R+W+ ++ C+ + V ++ P L++ A D+
Sbjct: 199 IHLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVKWLPGSHLIIQAGEDKE 378
Query: 159 VRVWD------ISGLRKKNLSPGAVESDVRG---ITGVDLFGT----------TDAVVKH 199
VR++D + KK + + G +T + FG +D +++
Sbjct: 379 VRIYDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGCEATLWQLSDGSIQN 558
Query: 200 VLEGHDRGVNWAAFHPT---MPLIVSGADDRQVKIWRM 234
+GH + F P+ M LI + + D V++W M
Sbjct: 559 EFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNM 672
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +1
Query: 203 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE 262
GHDR + + + + S + D+ +K+W+ S + + GH V+ +
Sbjct: 49 GHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHS--IRDFIGHDMVVTAIHLNTDNT 222
Query: 263 LILSNSEDKSIRVWDM 278
L+ S S D ++R+WD+
Sbjct: 223 LLCSGSRDNTVRIWDV 270
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 69 GGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFF---HHEYPWILSASDDQTIRVWNWQSR 125
GG+ + +W GH + I F + + I +AS D ++RVWN ++
Sbjct: 502 GGNGCEATLWQLSDGSIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNMFTK 681
Query: 126 TCVC 129
CVC
Sbjct: 682 ECVC 693
>03387
Length = 1891
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 89/227 (39%), Gaps = 10/227 (4%)
Frame = +1
Query: 108 ILSASDDQTIRVWNWQSRT-------CVCVLTGHNHYVMCAQFH-PSEDLVVSASLDQTV 159
+LSASDD TI +W+ S + TGH V +H E L S + DQ +
Sbjct: 409 LLSASDDHTICLWDINSTQRESRVVDAHTIFTGHTSVVEDVAWHLLHESLFGSVADDQKL 588
Query: 160 RVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPL 219
+WD T + HV++ H VN +F+P
Sbjct: 589 MIWDTR-------------------------SNTTSKPSHVVDAHTAEVNCLSFNPYSEF 693
Query: 220 IV-SGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNS-EDKSIRVWD 277
I+ +G+ D+ V +W + K ++ + H + + + P E IL++S D+ + VWD
Sbjct: 694 ILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 870
Query: 278 MSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERP 324
+SK G + D + P L GH + F P
Sbjct: 871 LSK-IGEEQLPEDAED-----GPPELLFIHGGHTAKISDFSWNPNEP 993
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 30/246 (12%)
Frame = +1
Query: 66 FVSGGDDYKIKVWNYKLRR---------CLFTLLGHLDYIRTTFFHHEYPWIL-SASDDQ 115
+S DD+ I +W+ + +FT GH + +H + + S +DDQ
Sbjct: 409 LLSASDDHTICLWDINSTQRESRVVDAHTIFT--GHTSVVEDVAWHLLHESLFGSVADDQ 582
Query: 116 TIRVWNWQSRTCV---CVLTGHNHYVMCAQFHP-SEDLVVSASLDQTVRVWDISGLRKKN 171
+ +W+ +S T V+ H V C F+P SE ++ + S D+TV +WD+ L+ K
Sbjct: 583 KLMIWDTRSNTTSKPSHVVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK- 759
Query: 172 LSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR---GVNWAAFHPTMPLIVSGADDRQ 228
H E H V W+ + T ++ S DR+
Sbjct: 760 --------------------------LHSFESHKDEIFQVQWSPHNET--ILASSGTDRR 855
Query: 229 VKIWRMNESKAWEVDTCR------------GHYNNVSCAVFHPRQELIL-SNSEDKSIRV 275
+ +W +++ ++ GH +S ++P + I+ S SED ++V
Sbjct: 856 LHVWDLSKIGEEQLPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIVCSVSEDNIMQV 1035
Query: 276 WDMSKR 281
W M++
Sbjct: 1036WQMAEN 1053
>27806
Length = 419
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = -1
Query: 105 YPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
+P I +AS D T R+++ ++ CV GH V +FHP +DLV++AS D T VW
Sbjct: 389 HPIIGTASADHTARIYSIETGACVLTYGGHQGSVNAVRFHPGQDLVLTASGDHTAHVW 216
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -1
Query: 215 PTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIR 274
P P+I + + D +I+ + V T GH +V+ FHP Q+L+L+ S D +
Sbjct: 395 PGHPIIGTASADHTARIYSIETGAC--VLTYGGHQGSVNAVRFHPGQDLVLTASGDHTAH 222
Query: 275 VW 276
VW
Sbjct: 221 VW 216
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 203 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
GH VN FHP L+++ + D +WR S+
Sbjct: 305 GHQGSVNAVRFHPGQDLVLTASGDHTAHVWRAQFSQ 198
>15118
Length = 1074
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Frame = +3
Query: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLR---RCLFTLLGHLDYIRTTFFHHEYP 106
H VRG+ F L ++ G D IK W + R R L L + I H +
Sbjct: 189 HVSGVRGVAFDAFNCLLITAGGDCDIKFWRFGSRDRARVLLKELKMSEGISRILLHRDSN 368
Query: 107 WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG 166
+ +D T+ V + + V V +GH++ + F +++AS+D TVR W +
Sbjct: 369 MLAVVLEDFTVSVIDVDTLRVVRVFSGHSNSITDLSFSGDGRWLITASMDCTVRTWSL-- 542
Query: 167 LRKKNLSPGAVESDVRGIT 185
+ + + AVE+ V +T
Sbjct: 543 VHGRLIDCFAVEAAVTSLT 599
>19498
Length = 903
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 18/143 (12%)
Frame = -1
Query: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWN-----------------YKLRRCLFT 88
+ D H G V + + + SGGDD I +W + R + T
Sbjct: 801 QMDSHLGCVNCVRWSENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHWRSVAT 622
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWN-WQSRTCVCVLTGHNHYVMCAQFHPSE 147
L GH + + + W+ S S D TI VWN + V V+ GH V + P
Sbjct: 621 LRGHAGDVLDLAWSPQDLWLASCSVDNTIVVWNALKFSEQVAVIRGHAGMVKGVTWDPVG 442
Query: 148 DLVVSASLDQTVRVWDISGLRKK 170
+ S S D+T+RVW S +++
Sbjct: 441 RYLASQSDDKTLRVWRTSDWKEE 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 67/173 (38%), Gaps = 5/173 (2%)
Frame = -1
Query: 112 SDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
+DD RV +C + H V C ++ + + S D+ + +W IS
Sbjct: 831 ADDDVPRV--------LCQMDSHLGCVNCVRWSENGKFLASGGDDKLIMIWQIS------ 694
Query: 172 LSPGAVESDVRGITGVDLFGTTDAVVKH-----VLEGHDRGVNWAAFHPTMPLIVSGADD 226
RG FG+ +++H L GH V A+ P + S + D
Sbjct: 693 ----------RGFGSGKSFGSNVTILEHWRSVATLRGHAGDVLDLAWSPQDLWLASCSVD 544
Query: 227 RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
+ +W + +V RGH V + P + S S+DK++RVW S
Sbjct: 543 NTIVVWNALKFSE-QVAVIRGHAGMVKGVTWDPVGRYLASQSDDKTLRVWRTS 388
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 77/208 (37%), Gaps = 32/208 (15%)
Frame = -1
Query: 70 GDDYKIKVWNYK------------LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 117
GD K+ +WN + R L + HL + + ++ S DD+ I
Sbjct: 891 GDSGKVVIWNMAPIRDEKEEADDDVPRVLCQMDSHLGCVNCVRWSENGKFLASGGDDKLI 712
Query: 118 RVW--------------------NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQ 157
+W +W+S V L GH V+ + P + + S S+D
Sbjct: 711 MIWQISRGFGSGKSFGSNVTILEHWRS---VATLRGHAGDVLDLAWSPQDLWLASCSVDN 541
Query: 158 TVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTM 217
T+ VW+ L+ F AV++ GH V + P
Sbjct: 540 TIVVWN--ALK---------------------FSEQVAVIR----GHAGMVKGVTWDPVG 442
Query: 218 PLIVSGADDRQVKIWRMNESKAWEVDTC 245
+ S +DD+ +++WR ++ W+ +TC
Sbjct: 441 RYLASQSDDKTLRVWRTSD---WKEETC 367
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Frame = -1
Query: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES--------------KAW-EVDTC 245
++ H VN + + SG DD+ + IW+++ + W V T
Sbjct: 798 MDSHLGCVNCVRWSENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHWRSVATL 619
Query: 246 RGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDH 291
RGH +V + P+ + S S D +I VW+ K + R H
Sbjct: 618 RGHAGDVLDLAWSPQDLWLASCSVDNTIVVWNALKFSEQVAVIRGH 481
>12960
Length = 550
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%)
Frame = +2
Query: 54 VRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
VR + F ++ G D +K+WN L T +GH + + I S
Sbjct: 182 VRAVRFSVDSRYCMTCGSDKSVKLWNPHRELFLKTYIGHGHEVLDAQGSGDNSQICSGGI 361
Query: 114 DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLS 173
D+T+ +++ S + H V C +F+ +++S SLD TVR WD R ++ +
Sbjct: 362 DKTVVLFDVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDT---RSRSHT 532
Query: 174 P 174
P
Sbjct: 533 P 535
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%)
Frame = +2
Query: 8 KSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFV 67
K V+ + F + +T + ++LW+ + + H V
Sbjct: 170 KQQAVRAVRFSVDSRYCMTCGSDKSVKLWNPHRELFLKTYIGHGHEVLDAQGSGDNSQIC 349
Query: 68 SGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRT 126
SGG D + +++ + L H + F+ E ILS S D T+R W+ +SR+
Sbjct: 350 SGGIDKTVVLFDVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTRSRS 526
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 96 IRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL 155
+R F + + ++ D+++++WN + GH H V+ AQ + S +
Sbjct: 182 VRAVRFSVDSRYCMTCGSDKSVKLWNPHRELFLKTYIGHGHEVLDAQGSGDNSQICSGGI 361
Query: 156 DQTVRVWDIS---GLRKKNLSPGAV 177
D+TV ++D++ LRK G V
Sbjct: 362 DKTVVLFDVASGQALRKYRDHAGTV 436
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
I SG D+ V ++ + +A + R H V+C F+ +ILS S D ++R WD
Sbjct: 344 ICSGGIDKTVVLFDVASGQA--LRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTR 517
Query: 280 KRT 282
R+
Sbjct: 518 SRS 526
>14555
Length = 627
Score = 38.1 bits (87), Expect(2) = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = -2
Query: 127 CVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITG 186
CV + GH + C +F+PS D + S D T R++D+ R+ N ES + G
Sbjct: 623 CVQMFEGHEADINCVRFYPSGDAFATGSDDATCRLFDLRADREVNCYRK--ESIIFGCNA 450
Query: 187 VDL 189
VD
Sbjct: 449 VDF 441
Score = 29.3 bits (64), Expect(2) = 2e-05, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -3
Query: 225 DDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTG 283
+D V +W + K GH N VSC P + + S D ++R+W + G
Sbjct: 406 NDYTVNVW--DALKGMRSTILYGHDNRVSCLRISPDGTSLCTGSWDYTLRIWA*ERERG 236
Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 109 LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
L ++D T+ VW+ +L GH++ V C + P + + S D T+R+W
Sbjct: 418 LGVTNDYTVNVWDALKGMRSTILYGHDNRVSCLRISPDGTSLCTGSWDYTLRIW 257
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = -2
Query: 242 VDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRD 290
V GH +++C F+P + + S+D + R++D+ V +R++
Sbjct: 620 VQMFEGHEADINCVRFYPSGDAFATGSDDATCRLFDLRADREVNCYRKE 474
>20662
Length = 1220
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Frame = +2
Query: 24 ILTSLHNGVIQLWDY----RMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWN 79
+L L G + LW+ +M +++ EHD + + ++S D+ IKVWN
Sbjct: 293 VLVGLDTGGVALWELQDEDKMFSMLSSACEHDDMTASVSINSDXSHYLSASYDHGIKVWN 472
Query: 80 YKLRRCLFTLLGHLDYIRTTFFHHEYPWI-LSASDDQTIRVWNW-QSRTCVCVLTGHNHY 137
L L+T H D + H P + LS S D I +W+ +S+ C+ + +
Sbjct: 473 TDLTS-LYTYRAHSDIVWDVQCHPTEPALFLSCSQDGKIVLWDVRESKPATCLPKCSSGF 649
Query: 138 -VMCAQFHP-SEDLVVSASLDQTVRVWDISGLRKKNLS 173
C Q+ P + ++ V V D+ + +KN+S
Sbjct: 650 KPTCVQWQPNARNMYAVGDEGGHVSVQDLRMVVEKNVS 763
>19863
Length = 502
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSR 125
VSG D I VW+ + L GH ++ F + W+LS S+D T+R+WN +
Sbjct: 16 LVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWNIEES 195
Query: 126 TCVCVLTGH 134
+ ++ H
Sbjct: 196 DQIPIVMEH 222
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 108 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
++S S D +I VW+ ++ L GH +V F + ++S S D TVR+W+I
Sbjct: 16 LVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWNI 186
Score = 30.0 bits (66), Expect = 6.8, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 220 IVSGADDRQVKIWRMNESKAWEVDTCR--GHYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
+VSG+ D + +W + V R GH V+ F Q +LS S D ++R+W+
Sbjct: 16 LVSGSSDMSIVVWDVENG----VQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWN 183
Query: 278 MSK 280
+ +
Sbjct: 184 IEE 192
>18981
Length = 407
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 63/157 (40%)
Frame = -2
Query: 108 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGL 167
I+SA+ D+T+RVW ++ + L GHN V C + VVS S D+T+ VW++
Sbjct: 379 IISAATDRTLRVWCLKNTCLLHTLRGHNDDVECVCIYGRR--VVSGSWDKTLIVWEVDTG 206
Query: 168 RKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDR 227
R H L GH + F VSG+ D
Sbjct: 205 RP----------------------------VHQLHGHTEAITAVQFDEGKA--VSGSADG 116
Query: 228 QVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
V+ W ++ + T G V C V++ QE+I
Sbjct: 115 DVRTWALDTGQCLLTMTT-GQDIEVYCVVYN--QEVI 14
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = -2
Query: 60 HKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 119
H + +S D ++VW K L TL GH D + + ++S S D+T+ V
Sbjct: 397 HLLDNMIISAATDRTLRVWCLKNTCLLHTLRGHNDDVECVCIYGRR--VVSGSWDKTLIV 224
Query: 120 WNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
W + V L GH + QF E VS S D VR W
Sbjct: 223 WEVDTGRPVHQLHGHTEAITAVQF--DEGKAVSGSADGDVRTW 101
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Frame = -2
Query: 219 LIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM 278
+I+S A DR +++W + + + T RGH ++V C + R+ ++S S DK++ VW++
Sbjct: 382 MIISAATDRTLRVWCLKNTCL--LHTLRGHNDDVECVCIYGRR--VVSGSWDKTLIVWEV 215
>01462
Length = 995
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +2
Query: 68 SGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRT 126
+G D KI VW+ + + L + GH DYI ++ +SAS+D T+R+W+ +S T
Sbjct: 248 AGAGDRKIHVWDIEAGQYLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMWDIRSST 424
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 108 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
+ + + D+ I VW+ ++ + + GH Y+ VSAS D TVR+WDI
Sbjct: 242 LYAGAGDRKIHVWDIEAGQYLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMWDI 412
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
+ +GA DR++ +W + + ++ GH + + V + +S SED ++R+WD+
Sbjct: 242 LYAGAGDRKIHVWDIEAGQ--YLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMWDIR 415
Query: 280 KRT 282
T
Sbjct: 416 SST 424
>02960
Length = 1577
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 119/308 (38%), Gaps = 56/308 (18%)
Frame = +2
Query: 67 VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFF--HHEYPWI---LSASDDQTIRVWN 121
+SG D +++W+ K + T+ GH ++ + H E + ++ S DQT VW
Sbjct: 527 LSGSYDNTVRLWSTK-GEAIMTIPGHTSPVKCVAWIKHDESSGVSTFVTGSHDQTALVWQ 703
Query: 122 WQSRT----CVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW----DISGLRKKN-- 171
WQ T C GH V C P + + S D+ +++W ++ G + ++
Sbjct: 704 WQRETNEVDCRLSCRGHAASVDCVAVSPDSQQMCTGSWDKMLKLWSTDCNVDGDQSEDTE 883
Query: 172 -------------------LSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHD------- 205
L+ V + +D + H L D
Sbjct: 884 RPSKKKKSAKSTTQTRVPVLTLSGHAEAVSAVRWLDPHRVVTSSWDHSLRLWDLHTAQQT 1063
Query: 206 ------RGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCR----GHYNNVSCA 255
+ V A+ P ++++G+ DR V R+ + + E +T + H V+
Sbjct: 1064SLIQGSKAVLDVAYSPLSHMLITGSADRHV---RLVDPRCSEGETVKCAFTSHTGWVTGV 1234
Query: 256 VFHP-RQELILSNSEDKSIRVWDM-SKRTGVQTFRRDHDRFWVLAAH---PNLNLFAAGH 310
+ P R+ L LS S D +++WD S + + DR +LA P L L + G
Sbjct: 1235DWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHEDR--ILAVDWSIPEL-LLSGGV 1405
Query: 311 DGGMIVFK 318
D + VF
Sbjct: 1406DNKLHVFS 1429
>21763
Length = 923
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 23/167 (13%)
Frame = +1
Query: 3 TKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ 62
+ F ++ + FHP RP + +++++ + K + + +D H
Sbjct: 301 SPFSQSKGLIQCVKFHPLRPIFFVASQR-FVRIYNLLTQQFVKKLQTNCKWISSMDVH-- 471
Query: 63 QPLFVSGGDDYKIKVWNYKLRRCLF----------TLLGHLDYIRTTFFHHEYPWILSAS 112
GGD+ + + +Y + C F L H +R +HH YP SAS
Sbjct: 472 -----PGGDN--VIIGSYDCKSCWFDLDLSTKPYKILRHHKRAVRHVSYHHRYPLFASAS 630
Query: 113 DDQTIRVWNWQ---------SRTCVCVLTGHNHY----VMCAQFHPS 146
DD +I V + + V VL GH VM QFHP+
Sbjct: 631 DDGSIIVCHGKVFGDLLLNPQIVPVKVLRGHKITNKLGVMDCQFHPT 771
>19140
Length = 573
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 246 RGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNL-N 304
+GH +NV V + LS S D +IR+W + ++ V TFR + W L A+ +
Sbjct: 496 KGHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANESFTT 317
Query: 305 LFAAGHD 311
L++ G D
Sbjct: 316 LYSGGRD 296
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = -3
Query: 86 LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHP 145
L L GH D ++ + + LS S D TIR+W+ + CV H+ V Q +
Sbjct: 508 LMKLKGHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANE 329
Query: 146 SEDLVVSASLDQTVRVWDISGLRKKNL 172
S + S D V DI + L
Sbjct: 328 SFTTLYSGGRDHQVWATDIKNPDNREL 248
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = -3
Query: 39 RMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRT 98
R C + K H V+ + ++ +SG D I++W+ +RC+ T
Sbjct: 523 RTCHKLMKLKGHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATF--------- 371
Query: 99 TFFHHEYPWILSASDDQT 116
H E W L A++ T
Sbjct: 370 -RVHDEGVWALQANESFT 320
>03395
Length = 2795
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +2
Query: 13 KGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFD-EHDGPVRGIDFHKQQPLFVSGGD 71
K + F K ILTS + I W+ L+ + + G + ID + ++GG+
Sbjct: 281 KCVCFGGKDLHILTSGTDHKIGYWEVGDGGLLRELEGSQTGAINTIDIDRDGQTILTGGE 460
Query: 72 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
D +K+W Y T +GH + I +I+S +D + +W
Sbjct: 461 DSLLKLWRYNEGEVTHTGIGHSNQITKARICPNRHYIVSGGEDGALHIW 607
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Frame = +2
Query: 59 FHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLG-HLDYIRTTFFHHEYPWILSASDDQTI 117
F + ++ G D+KI W L L G I T + IL+ +D +
Sbjct: 293 FGGKDLHILTSGTDHKIGYWEVGDGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSLL 472
Query: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
++W + GH++ + A+ P+ +VS D + +W
Sbjct: 473 KLWRYNEGEVTHTGIGHSNQITKARICPNRHYIVSGGEDGALHIW 607
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 23/192 (11%)
Frame = +2
Query: 66 FVSGGDDYKIKVWNY-------KLRRCLFT-LLGHLDYIRTTFFHHEYPWILSASDDQTI 117
VSGG + +++VW+ K R L + H + H +SAS D +
Sbjct: 41 LVSGGGEGQVRVWDIVKDMLTGKTRGDLVANMKEHKGKVTAIQIHTNDRCCVSASTDGST 220
Query: 118 RVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS--GLRKK--NLS 173
+W+ + T ++ N C F + ++++ D + W++ GL ++
Sbjct: 221 IIWDLITNTRSQIVLA-NTLFKCVCFGGKDLHILTSGTDHKIGYWEVGDGGLLRELEGSQ 397
Query: 174 PGAVES-DVRGITGVDLFGTTDAVVK----------HVLEGHDRGVNWAAFHPTMPLIVS 222
GA+ + D+ L G D+++K H GH + A P IVS
Sbjct: 398 TGAINTIDIDRDGQTILTGGEDSLLKLWRYNEGEVTHTGIGHSNQITKARICPNRHYIVS 577
Query: 223 GADDRQVKIWRM 234
G +D + IW+
Sbjct: 578 GGEDGALHIWKF 613
>01768
Length = 1424
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Frame = +3
Query: 1 MLTKFETKSARVKGLSFHPKRPWILTSL-HNGVIQLWDYRM-----CTLIDKFDEHDGPV 54
+LT E S + ++++P +L S +G+I++WD RM + F H PV
Sbjct: 954 VLTVPEAHSRDINVINWNPIEKHLLASGGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPV 1133
Query: 55 RGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH 103
++++ Q + + G+D +I +W++ + R LD F H
Sbjct: 1134 TSLEWNPQDSSVLAASGEDDQITIWDFSVERDEGEGEEELDVPAQLLFQH 1283
>13278
Length = 870
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +1
Query: 108 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGL 167
+ SAS D T+R+W + C+ LT H V F P + S S D+ V +W
Sbjct: 121 LASASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW----- 285
Query: 168 RKKNLSPGAVESDVRGITGV 187
N+ G++ +G G+
Sbjct: 286 ---NVQTGSLVHSYKGTGGI 336
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%)
Frame = +1
Query: 65 LFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQS 124
+ S D +++W + CL TL H + + + F + ++ S S D+ + +WN Q+
Sbjct: 118 ILASASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNVQT 297
Query: 125 RTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
+ V G H + + SAS D +V V D+
Sbjct: 298 GSLVHSYKGTGGIFEVCWNHRGDKVGASAS-DGSVFVLDL 414
>00825
Length = 1821
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 31/278 (11%)
Frame = -2
Query: 30 NGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVW----------- 78
+G + W+ + + HDG V G+ H F S G D IK W
Sbjct: 1808 DGELICWNLPKQQMACRVQAHDGIVHGMAAHSSGQYFFSCGSDKTIKQWSLDPEGTIAPE 1629
Query: 79 --NYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNH 136
N L +C++T L H + + F + S S + VW+ + + +
Sbjct: 1628 PVNTLLAKCIYTSLDH--HWKDDIF------VTSGS---RVDVWDEKRSEPMRSFSWGVE 1482
Query: 137 YVMCAQFHPSED-LVVSASLDQTVRVWDISG----------LRKKNLSPGAVESDVRGIT 185
V +F+P E L+ +A+ D+++ ++D+ G +R LS +E+ IT
Sbjct: 1481 SVHHVKFNPVETYLLGAAAHDRSILLYDMRGSAPLRKVVMKMRTNALSWNPMEAFT--IT 1308
Query: 186 GVDLFG---TTD----AVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
+ G T D ++ ++ H V + PT VS D+ ++I+ +++
Sbjct: 1307 SANEDGNLYTFDMRKLSMPLNMHRDHTAAVMDVDYCPTGREFVSAGYDKVIRIFPVDKGH 1128
Query: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
+ EV + V V+ + I S S++ +IRVW
Sbjct: 1127 SREVYHTK-RMQRVGSVVWSRDSKYIFSASDEMNIRVW 1017
>01805
Length = 2124
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 17/148 (11%)
Frame = -1
Query: 108 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISG 166
+ SAS D T+ +W+ T H+ V C +HP E+ +++ S D TV+V D
Sbjct: 528 LASASADTTVALWDLSEGKMAMNFTQHSREVQCCNWHPQEEQTLLTGSFDNTVKVVDCRS 349
Query: 167 LRKKNLS---PGAVESDV-RGITGVDLFGTTDAVVKHVLE-----------GHDRGVNWA 211
+ S G VE V + L TD + + + H V
Sbjct: 348 AETCHKSWTVEGEVEKAVWNHHNPLQLLACTDKGMVYCFDIRHEKPVFSVGAHSSCVTGV 169
Query: 212 AFHPTMP-LIVSGADDRQVKIWRMNESK 238
+P L+++ ++D+ +K+W + + K
Sbjct: 168 CLSSQIPGLMITTSEDKTMKVWDIQDDK 85
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = -1
Query: 219 LIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWD 277
++ S + D V +W ++E K H V C +HP++E +L+ S D +++V D
Sbjct: 531 VLASASADTTVALWDLSEGKM--AMNFTQHSREVQCCNWHPQEEQTLLTGSFDNTVKVVD 358
Query: 278 M-SKRTGVQTFRRDHDRFWVLAAHPN-LNLFAAGHDGGMIVFKLERERPAYAV 328
S T +++ + + + H N L L A G + F + E+P ++V
Sbjct: 357 CRSAETCHKSWTVEGEVEKAVWNHHNPLQLLACTDKGMVYCFDIRHEKPVFSV 199
>15780
Length = 735
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -1
Query: 107 WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS 165
++ +A D T+ VW+ S T V LT H V F ++ S +D ++R+WD++
Sbjct: 732 YLSTAGADHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMDNSIRLWDLA 556
>21960
Length = 756
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 97 RTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVM-CAQFHPSEDLVVSASL 155
R FF I+S SDD I W+ + + G + V+ C + HP+ ++ ++ L
Sbjct: 376 RVNFFGPHSEHIISGSDDGNIFYWDKNTEAVTNFMKGDDAGVVNCLEQHPTMPVLATSGL 555
Query: 156 DQTVRVWDISG 166
D V++W S
Sbjct: 556 DHNVKIWTPSA 588
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +1
Query: 143 FHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLE 202
F P + ++S S D + WD KN T+AV ++
Sbjct: 388 FGPHSEHIISGSDDGNIFYWD------KN---------------------TEAVTN-FMK 483
Query: 203 GHDRGV-NWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEV 242
G D GV N HPTMP++ + D VKIW + EV
Sbjct: 484 GDDAGVVNCLEQHPTMPVLATSGLDHNVKIWTPSAKPETEV 606
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 31/200 (15%)
Frame = +1
Query: 113 DDQTIRVWNWQSRTCVCVL---TGHNHYV--MCAQFHP-SEDLVVSASLDQTVRVWDISG 166
+D T++ ++ +S C +L T N V HP + + +S S D +RV+D
Sbjct: 1 EDSTVKHFDLRSNCCTTMLRCYTKENRRVRLFSIAHHPFASEFCISGS-DDKLRVYDKRK 177
Query: 167 LRK--KNLSP-----GAVESDVRGITGVDLFGT-TDAVVKHVLEGHDRGVNWAA------ 212
L K +SP + V +G ++ + +DA + + + +G +A
Sbjct: 178 LDKTVHEMSPKDTKVSQITCAVYNHSGSEILASYSDAAIYLL*QPQLQGRRISALLRRPH 357
Query: 213 ----------FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV-SCAVFHPRQ 261
F P I+SG+DD + W N + +G V +C HP
Sbjct: 358 K*PYHQRVNFFGPHSEHIISGSDDGNIFYWDKNTEAV--TNFMKGDDAGVVNCLEQHPTM 531
Query: 262 ELILSNSEDKSIRVWDMSKR 281
++ ++ D ++++W S +
Sbjct: 532 PVLATSGLDHNVKIWTPSAK 591
>16199
Length = 694
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 252 VSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR 288
++CA FHP + + +ED I++WD+ +R V F+
Sbjct: 80 LTCAQFHPDGLIFATGTEDSVIKIWDLKERANVANFQ 190
Score = 35.8 bits (81), Expect = 0.10, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 45/134 (33%), Gaps = 17/134 (12%)
Frame = +2
Query: 17 FHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDF--------HKQQPLFVS 68
FHP T + VI++WD + + F H GPV I F +Q+ L+ +
Sbjct: 95 FHPDGLIFATGTEDSVIKIWDLKERANVANFQGHQGPVTSISFSETDTTWPRQQKTLWSN 274
Query: 69 GGD-----DYKIKVWNYKLR--RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWN 121
G K+ W +R RC T + W
Sbjct: 275 CGT*GN*RTSKLYSWETSMR*KRCALT--------------------------RVEPTWQ 376
Query: 122 WQSRT--CVCVLTG 133
WQ++T C C G
Sbjct: 377 WQAQTSECTCASNG 418
Score = 31.6 bits (70), Expect = 2.1, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 138 VMCAQFHPSEDLVVSASLDQTVRVWDI 164
+ CAQFHP + + + D +++WD+
Sbjct: 80 LTCAQFHPDGLIFATGTEDSVIKIWDL 160
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 13/84 (15%)
Frame = +2
Query: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH------PRQELI 264
A FHP + +G +D +KIW + E V +GH V+ F PRQ+
Sbjct: 89 AQFHPDGLIFATGTEDSVIKIWDLKERA--NVANFQGHQGPVTSISFSETDTTWPRQQKT 262
Query: 265 L-------SNSEDKSIRVWDMSKR 281
L N + W+ S R
Sbjct: 263 LWSNCGT*GN*RTSKLYSWETSMR 334
>17266
Length = 480
Score = 38.1 bits (87), Expect = 0.019, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 7/134 (5%)
Frame = -1
Query: 189 LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGH 248
L+ D + K GH+ +N + P +G+DD +++ + D G
Sbjct: 381 LWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDATCRLFDI------RADQEIGM 220
Query: 249 Y--NNVSCAV----FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPN 302
Y +N+ C + F L+L +D + +WD+ K+ +R VLA H N
Sbjct: 219 YSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIWDVLKQ----------ERTGVLAGHDN 70
Query: 303 -LNLFAAGHDGGMI 315
++ DG +
Sbjct: 69 RVSCLGVTEDGSAV 28
Score = 37.0 bits (84), Expect = 0.047, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 3/145 (2%)
Frame = -1
Query: 15 LSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYK 74
LS P ++ + +LWD R F H+ + I + F +G DD
Sbjct: 441 LSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDAT 262
Query: 75 IKVWNYKLRRCLFTLLGHLDYI---RTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 131
++++ + + + + H + I + F +L DD +W+ + VL
Sbjct: 261 CRLFDIRADQEI-GMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIWDVLKQERTGVL 85
Query: 132 TGHNHYVMCAQFHPSEDLVVSASLD 156
GH++ V C V + S D
Sbjct: 84 AGHDNRVSCLGVTEDGSAVATGSWD 10
Score = 36.2 bits (82), Expect = 0.085, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = -1
Query: 215 PTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIR 274
P M VSGA D K+W + + + T GH ++++ + P + S+D + R
Sbjct: 429 PDMRTFVSGACDASAKLWDVRDGMCKQ--TFSGHESDINAITYFPNGHAFATGSDDATCR 256
Query: 275 VWDMSKRTGVQTFRRDH 291
++D+ + + D+
Sbjct: 255 LFDIRADQEIGMYSHDN 205
Score = 34.7 bits (78), Expect = 0.23, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = -1
Query: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRT-TFFHHEYPWILSASDDQTIRVWNWQS 124
FVSG D K+W+ + C T GH I T+F + + + + SDD T R+++ ++
Sbjct: 414 FVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFA-TGSDDATCRLFDIRA 238
Query: 125 RTCVCVLTGHNHYVMCA----QFHPSEDLVVSASLDQTVRVWDI 164
+ + + N ++C F S L++ D +WD+
Sbjct: 237 DQEIGMYSHDN--IICGITSVAFSKSGRLLLGGYDDFNCNIWDV 112
>20271
Length = 567
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -1
Query: 45 DKFDEHDGPVRGIDFHKQ------QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRT 98
+ ++ H GP+ ID H P F++ D+ +K+WN K ++ + + + DY+
Sbjct: 303 EAYEGHQGPITAIDTHHAAGQIDFSPFFLTASFDWTVKLWNIKEQKYVCSFEDNSDYVSD 124
Query: 99 TFFHHEYPWILSASD 113
+ P + S D
Sbjct: 123 VQWSPTNPALFSCVD 79
>14500
Length = 1238
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +3
Query: 62 QQPLFVSGGD--DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSA---SDDQT 116
Q L SGG D I WN L ++ + + E+ ++S+ + +Q
Sbjct: 237 QPSLLASGGGTADRHIHFWNCNTGTNLSSV-DTKSQVCALLWSKEHRELISSHGFAQNQL 413
Query: 117 IRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSP 174
I +W + + + V LTGH V+ P + VVSA+ D+T+R+W + K+ P
Sbjct: 414 I-IWKYPAMSRVAELTGHTARVLHMAMSPDGETVVSAAADETLRLWKCFTVDKEKKRP 584
>16105
Length = 960
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
Frame = -2
Query: 130 VLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDI--SGLRKKNLSPGAVESDVRGITG 186
++ GH V+ Q+ P D ++ SAS D TV+VW I SGL
Sbjct: 590 LVAGHKGAVLDIQWCPHNDNVIASASDDCTVKVWQIPDSGL------------------- 468
Query: 187 VDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMP-LIVSGADDRQVKIWRMNESKAW-EVDT 244
+ TD VV L GH + +HP+ ++VS D ++ W + + EVD
Sbjct: 467 --VTNLTDPVVD--LVGHQKRCCLIVWHPSAQNVLVSAGADNKILFWNVGTGEPMLEVDV 300
Query: 245 CRGHYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
+ + C F+ ++ +DK +R+ D
Sbjct: 299 ----PDMIYCMSFNFNGSRLVCTCKDKKLRIID 213
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = -2
Query: 108 ILSASDDQTIRVWNWQSRTCVCVLT-------GHNHYVMCAQFHPS-EDLVVSASLDQTV 159
I SASDD T++VW V LT GH +HPS ++++VSA D +
Sbjct: 527 IASASDDCTVKVWQIPDSGLVTNLTDPVVDLVGHQKRCCLIVWHPSAQNVLVSAGADNKI 348
Query: 160 RVWDI 164
W++
Sbjct: 347 LFWNV 333
>33180
Length = 460
Score = 32.7 bits (73), Expect(2) = 0.092, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -2
Query: 15 LSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDF-HKQQPLFVSGGDDY 73
L F I+ ++G + ++D K D HD V + F + SGGDD
Sbjct: 435 LMFSSDNTEIVGGANDGCLYVYDRESNQRTLKIDAHDDDVNAVAFADDSSQILYSGGDDG 256
Query: 74 KIKVWNYKLRR 84
KVW+ + R
Sbjct: 255 LCKVWDRRTLR 223
Score = 21.9 bits (45), Expect(2) = 0.092, Method: Compositional matrix adjust.
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1
Query: 108 ILSASDDQTIRVWN 121
+LS S DQTI++W+
Sbjct: 139 LLSNSKDQTIKLWD 98
>02090
Length = 1841
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -3
Query: 109 LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR 168
S D I VW+ ++T V GH C P + + LD TVR WD+ R
Sbjct: 1578 FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLREGR 1399
Query: 169 K 169
+
Sbjct: 1398 Q 1396
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 1/119 (0%)
Frame = -3
Query: 212 AFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDK 271
A P + S D + +W ++ V +GH + SC P + + D
Sbjct: 1605 AISPDGKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISPDGTKLWTGGLDN 1432
Query: 272 SIRVWDMSKRTGVQTFRRD-HDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVH 329
++R WD+ R G Q + D + + L P A G + + + Y +H
Sbjct: 1431 TVRSWDL--REGRQLQQHDFSSQIFSLGYCPTGEWLAVGMESSNVEVLHHSKPDKYQLH 1261
>26107
Length = 1338
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 13/154 (8%)
Frame = -3
Query: 104 EYPWI------LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDL-VVSASLD 156
+Y WI L+AS DQT+ +W+ ++ T V GH V PS S + D
Sbjct: 1072 DYSWISNDSQCLTASGDQTVALWDVETTTKVTTFIGHKCSVRSVASCPSSPAQCASGARD 893
Query: 157 QTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTD------AVVKHVLEGHDRGVNW 210
+ +WD +K+ P + V +G A K V++ + V
Sbjct: 892 GHIMLWDSRVNKKREHQPCSQVHQVCPQSGHQSKPAKHRRIHRAAGPKGVMDTQ-QSVTC 716
Query: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDT 244
+ +I SGA+D VK+W +++ W +T
Sbjct: 715 VLYQTDNLIISSGANDGCVKMW---DTRKWYTNT 623
>21921
Length = 1341
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -1
Query: 91 GHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDL- 149
GH +R+ W++S SDD TIR W S C+ L V ++P+ L
Sbjct: 489 GHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVSSGRCMKTLQV-GGCVTSVAWNPNPSLC 313
Query: 150 VVSASLDQTV 159
VV+A+L+ TV
Sbjct: 312 VVAATLNTTV 283
>17298
Length = 476
Score = 35.4 bits (80), Expect = 0.15, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 246 RGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRT 282
R H V+C F+ +ILS S D ++R WD R+
Sbjct: 221 RDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTRSRS 111
Score = 33.5 bits (75), Expect = 0.49, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 134 HNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSP 174
H V C +F+ +++S SLD TVR WD R ++ +P
Sbjct: 215 HAGTVNCVKFNEESTVILSGSLDNTVRAWDT---RSRSHTP 102
>04358
Length = 2430
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 17/83 (20%)
Frame = +1
Query: 56 GIDFHKQQPLFV-------SGGDDYKIKVW--NYKLR---RCLF----TLLGHLDYIRTT 99
+ +K +P +V +GG D + N+ +R RC TL GH D I +
Sbjct: 1261 SVSLYKTEPHYVLGLAAQHTGGADSLVAAASSNFMVRLYSRCRLAQTNTLTGHDDVISSI 1440
Query: 100 FFHHEYP-WILSASDDQTIRVWN 121
F H P I++AS D T+R+W+
Sbjct: 1441 RFLHTDPGLIMTASHDHTVRIWD 1509
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 108 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQF-HPSEDLVVSASLDQTVRVWD 163
+ +AS + +R+++ LTGH+ + +F H L+++AS D TVR+WD
Sbjct: 1339 VAAASSNFMVRLYSRCRLAQTNTLTGHDDVISSIRFLHTDPGLIMTASHDHTVRIWD 1509
>28403
Length = 428
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -1
Query: 1085 CEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFK 1119
CE A FTHSNLQ VH RT + +F LKN +
Sbjct: 182 CE*ACSFTHSNLQTVHKF--ARTFIYIFCSLKNIR 84
>15337
Length = 860
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/100 (18%), Positives = 44/100 (44%)
Frame = -1
Query: 2 LTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHK 61
L ++ + + +F P ++ +G +++++Y LI + G + + +
Sbjct: 350 LYRWVVGTGAISEFAFSPCSRYLAVVGQDGHLRVFNYNSMELIGTMKSYFGGLLCVCWSP 171
Query: 62 QQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFF 101
V+GG+D + VW++ +R + GH ++ F
Sbjct: 170 DGKYIVTGGEDDLVTVWSFHEKRVVCRGHGHKSWVNVVAF 51
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = -1
Query: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVC 129
G D ++V+NY + T+ + + + + +I++ +D + VW++ + VC
Sbjct: 272 GQDGHLRVFNYNSMELIGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFHEKRVVC 93
Query: 130 VLTGHNHYVMCAQF 143
GH +V F
Sbjct: 92 RGHGHKSWVNVVAF 51
>04524
Length = 1340
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 226 DRQVKIWRMNESKAWEVDT-CRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKR 281
DR KI A+ + T C GH V+C V+ +++S S D ++R W+M +
Sbjct: 971 DRDEKIRVSQFPNAYNIHTYCLGHTQFVNCLVYVEEFRVLISGSGDCTVRAWNMEGK 801
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = -1
Query: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV---CVLTGHNHYVMCAQFHP 145
LLGHL + +++ D+ IRV + + + C+ GH +V C +
Sbjct: 1040 LLGHLSMVLDVCLTGREGHVVTCDRDEKIRVSQFPNAYNIHTYCL--GHTQFVNCLVYVE 867
Query: 146 SEDLVVSASLDQTVRVWDISG 166
+++S S D TVR W++ G
Sbjct: 866 EFRVLISGSGDCTVRAWNMEG 804
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 72 DYKIKVWNYKLRRCLFT-LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSR 125
D KI+V + + T LGH ++ + E+ ++S S D T+R WN + +
Sbjct: 965 DEKIRVSQFPNAYNIHTYCLGHTQFVNCLVYVEEFRVLISGSGDCTVRAWNMEGK 801
>31474
Length = 403
Score = 33.5 bits (75), Expect = 0.57, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Frame = -3
Query: 102 HHEYPW----------ILSASDDQTIRVWNWQSRTCVCVLT---GHNHYVMCAQFHPSED 148
H E+ W + S D+ I++W + VC T H V + P +
Sbjct: 308 HDEHAWCVAWNPTGTLLASCGSDKIIKIWGKEGDNWVCKSTLTDAHTRTVRSLGWSPCGN 129
Query: 149 LVVSASLDQTVRVWDISG 166
+ SAS D T VW G
Sbjct: 128 YLSSASFDATTAVWSRKG 75
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = -3
Query: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDT--CRGHYNNVSCAVFH 258
L HD A++PT L+ S D+ +KIW E W + H V +
Sbjct: 317 LSAHDEHAWCVAWNPTGTLLASCGSDKIIKIWG-KEGDNWVCKSTLTDAHTRTVRSLGWS 141
Query: 259 PRQELILSNSEDKSIRVWDMSKRTG 283
P + S S D + VW S++ G
Sbjct: 140 PCGNYLSSASFDATTAVW--SRKGG 72
>10264
Length = 416
Score = 33.5 bits (75), Expect = 0.60, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 102 HHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVR 160
HH+ ++S D VW+ Q T + GH ++ QF + DLV++ D +V
Sbjct: 212 HHD-ARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSGLDPDLVMTGGSDASVH 36
Query: 161 VWDIS 165
VW +S
Sbjct: 35 VWRVS 21
>31864
Length = 545
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Frame = +2
Query: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDT-------------CRGHYNN 251
+R VN AA P + +V G +++ +KA + D+ +GH+
Sbjct: 173 ERPVNSAAISPILDHVVLGGGQDAMEV-TTTSTKAGKFDSRFFHLIYEEEFARLKGHFGP 349
Query: 252 VSCAVFHPRQELILSNSEDKSIRV 275
++ FHP + S ED +RV
Sbjct: 350 INSLAFHPDGKSYASGGEDGFVRV 421
>10162
Length = 1629
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/82 (17%), Positives = 35/82 (42%)
Frame = +3
Query: 208 VNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSN 267
+ W +H ++++G +V +W++ ++ + H C P + +
Sbjct: 36 ITWLQWHGGAHVLLAGTQGGEVWLWQVPSQDYSKMKMLQSHGQPSLCGKILPNGKYVCVG 215
Query: 268 SEDKSIRVWDMSKRTGVQTFRR 289
D +++WD+ T V T++
Sbjct: 216 YSDGVVKLWDLKTGTAVHTWQH 281
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 72/198 (36%), Gaps = 37/198 (18%)
Frame = +3
Query: 19 PKRPWILTSLHNGVIQLWDYRMCTLIDKFD-----EHDGPVRG----------------- 56
P ++ +GV++LWD + T + + E + P R
Sbjct: 189 PNGKYVCVGYSDGVVKLWDLKTGTAVHTWQHSVMPEEEMPERNSSDEEDGEEVEVEREED 368
Query: 57 ------IDFHKQQPLFVSGGDDYKIKVWNYKLRR--CLFTLLGHLD------YIRTTFFH 102
+D L +SG D KV+N + F D + + F
Sbjct: 369 TVAILCVDCSADNALIMSGCADATAKVFNVSSGKLXSAFNCAASQDSQDKDNSVESVAFC 548
Query: 103 HEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
P+ +A++ +++VW+ + H V Q+ S L+ +A LD +RVW
Sbjct: 549 PVSPYAATATNSGSVQVWDLPTSVARHSFQ-HPEGVCKLQWSSSTALLYTACLDGVMRVW 725
Query: 163 DI-SGLRKKNLSPGAVES 179
D SG K L+ A S
Sbjct: 726 DARSGASKAVLTGHARNS 779
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Frame = +3
Query: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTF 100
C + D V + F P + + ++VW+ + H + +
Sbjct: 489 CAASQDSQDKDNSVESVAFCPVSPYAATATNSGSVQVWDLPTSVARHSFQ-HPEGVCKLQ 665
Query: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQT 158
+ + +A D +RVW+ +S VLTGH F + D +VS S D T
Sbjct: 666 WSSSTALLYTACLDGVMRVWDARSGASKAVLTGHARNSCILDFDVTRDGTCLVSGSEDGT 845
Query: 159 VRV 161
RV
Sbjct: 846 ARV 854
>06576
Length = 1547
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Frame = -2
Query: 39 RMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRT 98
R+ + +F E D ++G+D+ + + + G + + L +L HL +
Sbjct: 1327 RVSVVSCRFQEEDIDIQGLDYSVVKDVQMDQG----VSCLAWSPSTSLSSLDKHLCFA-- 1166
Query: 99 TFFHHEYPWILSASDDQTIRVWNWQSRTC--VCVLTGHNHYVMCAQFHPS-EDLVVSASL 155
+A DD ++RV+ +T V+ GH +V F P+ ED V S
Sbjct: 1165 -----------AACDDHSVRVFTSDLKTTNKTHVVKGHTDFVNSVTFSPTEEDQVXSTGD 1019
Query: 156 DQTVRVW 162
D T RVW
Sbjct: 1018 DLTCRVW 998
>05493
Length = 1292
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -2
Query: 1064 LCMEIERKKLPKETLDQQ--KRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTA 1121
L ME+ER L E +D+Q R+C P + L LR A++L+ K K F A
Sbjct: 691 LMMEVERLDLAMEYVDEQAYSRVCLYLTSCVAYVPDPENTAL-LRCAVDLYRKFKQFPQA 515
Query: 1122 ATFARRL 1128
FA +L
Sbjct: 514 LRFALQL 494
>31054
Length = 392
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Frame = -2
Query: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQS- 124
F G D +K W + + L GH I T + + ++S +D+ T+ +W+W++
Sbjct: 367 FAXGSPD-XVKQWKFPDGNFIQNLSGHNAIINTLAVNSDGV-LVSGADNGTMHLWDWRTG 194
Query: 125 ----RTCVCVLTG----HNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
R V G + + C F SE +++A D+T++V+
Sbjct: 193 YNFQRIHAAVQPGSLDSESGFFACT-FDQSESRLITAEADKTIKVY 59
>12140
Length = 727
Score = 31.6 bits (70), Expect = 1.8, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Frame = +2
Query: 221 VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR----QELILSNSEDKSIRVW 276
VSG D VKIWR +E+ E GH + V + P + +I S S+D + +W
Sbjct: 272 VSGGCDNLVKIWREDETGWVEDQKLEGHSDWVRDVAWAPSIGLPRNVIASCSQDCRVIIW 451
Query: 277 DMSKRTGVQTFR---RDHDRFWVLAAHPNLNLFA-AGHDGGMIVFK 318
+ T R + D W ++ N+ A +G D + ++K
Sbjct: 452 TNDGSSNQWTSRILNKFSDVVWHVSWSVTGNILAVSGGDNKVTLWK 589
>38177
Length = 430
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 3 TKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 57
T + V+ + + W++T+ H+G I+ W M + F H P+RG+
Sbjct: 96 TILQAHDVSVRAMRWSNHDQWMVTADHSGYIKYWQSNM-NNVKMFQGHKEPIRGV 257
>04088
Length = 511
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 109 LSASDDQTIRVWNWQSRTCVCVLTGHNH--YVMCAQFHPSEDLVVSASLDQTVRVWDI 164
L +S D T+R+ + + + TGH H Y + + + + LVVS S D V WD+
Sbjct: 78 LVSSQDNTVRLMDKDTGEMLNEFTGHKHSQYKIDSCLNNEDTLVVSGSEDGKVYFWDL 251
>01598
Length = 1545
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 102 HHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVR 160
HH+ ++S D VW+ Q T + GH ++ QF + DLV++ D +V
Sbjct: 1333 HHDAR-LVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSGLDPDLVMTGGSDASVH 1509
Query: 161 VWDIS 165
VW +S
Sbjct: 1510 VWRVS 1524
>36111
Length = 687
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 53 PVRGIDFHKQQPLFVSGGDDYKIKVWN--YKLRRCLF 87
PV + FH F +GG D + +W+ +K R C F
Sbjct: 236 PVNAVAFHNVYNTFATGGSDGYVNIWDGFHKKRLCXF 346
>13509
Length = 572
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 12 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFV 67
V +SFHP + T +G WD T + ++ D P+ +F+ Q +F
Sbjct: 368 VNDISFHPVHGTLSTVGSDGRFSFWDKDARTKLKTSEQFDQPITTCNFNAQGNIFA 535
>25880
Length = 423
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 38/76 (50%)
Frame = +2
Query: 204 HDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQEL 263
H V AF + IV+G++++ V+++ + + A E + GH + ++ L
Sbjct: 53 HKHIVKSVAFDNSSENIVTGSNEKLVRVFNLEQPDA-EPELYGGHTGAI-------KRAL 208
Query: 264 ILSNSEDKSIRVWDMS 279
S SED ++R+W +
Sbjct: 209 YASGSEDGTLRLWQTT 256
>01249
Length = 1743
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 198 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV 252
+ VL+GH V AF + SG+ + +V IW M + +D G NV
Sbjct: 936 ERVLQGHSDAVTCLAFSSDGQRLASGSQNGKVIIWNMESGDSTSLDI-SGAVGNV 775
>07781
Length = 1269
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 227 RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM 278
R+ WR ++ +AW CA ELI S S+D ++VWD+
Sbjct: 821 RETSQWRAHDFEAW------------ICAFDQWNTELIYSGSDDCKLKVWDL 702
>30297
Length = 822
Score = 29.6 bits (65), Expect = 7.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = -1
Query: 242 VDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
+ + RGH +VSC + +++L+++ D ++R+W
Sbjct: 249 IQSWRGHVESVSCLDLVEQNKVLLTSAADCTVRMW 145
>11915
Length = 737
Score = 29.3 bits (64), Expect = 9.8, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +1
Query: 74 KIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPW-ILSASDDQTIRVWNWQSR-TC---V 128
+IK+WN + + L ++ H + F + ++SAS D T+++W + + C +
Sbjct: 475 RIKLWNCETGKLLIEMMDHKATVHDLHFAADNSLCLMSASHDGTVKLWEFDDQGDCNMYL 654
Query: 129 CVLTGHNHYVMCAQFHPSEDLVVSASL 155
+ T H C H + + SL
Sbjct: 655 TLRTNAKHAFSCRWSHDRRYVATAGSL 735
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|33563240|ref|NP_033736.1| actin, alpha 1, skeletal
muscle [Mus musculus]
(377 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04742 740 0.0
39562 599 e-172
02757 294 e-121
12322 238 4e-63
00608 199 1e-51
01436 169 1e-42
11487 95 8e-42
19721 100 4e-33
36954 123 1e-28
32273 122 2e-28
18926 110 2e-25
13361 92 2e-19
17032 37 0.019
06084 28 7.5
>04742
Length = 2111
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/377 (93%), Positives = 360/377 (95%)
Frame = +2
Query: 1 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60
MCDED ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 92 MCDED-VAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 268
Query: 61 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREK
Sbjct: 269 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 448
Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180
MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV H VPIYEGYALPHAI RL
Sbjct: 449 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYEGYALPHAISRL 628
Query: 181 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240
DLAGRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EM TAASSSSLEK
Sbjct: 629 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEK 808
Query: 241 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300
SYELPDGQVITIGNERFRCPE +FQPSF+GMESAG HETTYNSIMKCD+DIRKDLYAN V
Sbjct: 809 SYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGXHETTYNSIMKCDVDIRKDLYANTV 988
Query: 301 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT 360
+SGG+TMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 989 LSGGSTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 1168
Query: 361 KQEYDEAGPSIVHRKCF 377
KQEYDE+GPSIVHRKCF
Sbjct: 1169KQEYDESGPSIVHRKCF 1219
>39562
Length = 1438
Score = 599 bits (1545), Expect = e-172, Method: Compositional matrix adjust.
Identities = 283/301 (94%), Positives = 291/301 (96%)
Frame = -2
Query: 77 IITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV 136
I+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYV
Sbjct: 1437 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 1258
Query: 137 AIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 196
AIQAVLSLYASGRTTGIVLDSGDGVTH VPIYEGYALPHAIMRLDLAGRDLTDYLMKILT
Sbjct: 1257 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 1078
Query: 197 ERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNER 256
ERGYSF TTAEREIVRDIKEKL YVALDFE EM TAASSSSLEKSYELPDGQVITIGNER
Sbjct: 1077 ERGYSFTTTAEREIVRDIKEKLDYVALDFEQEMLTAASSSSLEKSYELPDGQVITIGNER 898
Query: 257 FRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQ 316
FRCPE +FQPSF+GMESAGIHETTYNSIMKCD+DIRKDLYAN V+SGG+TMYPGIADRMQ
Sbjct: 897 FRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQ 718
Query: 317 KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKC 376
KEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQEYDE+GPSIVHRKC
Sbjct: 717 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 538
Query: 377 F 377
F
Sbjct: 537 F 535
>02757
Length = 1094
Score = 294 bits (753), Expect(3) = e-121, Method: Compositional matrix adjust.
Identities = 140/151 (92%), Positives = 146/151 (96%)
Frame = -2
Query: 174 PHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAA 233
P AI+RLDLAGRDLTDYLMKILTERGYSF TTAEREIV DIKEKLCYVALDFE EMATAA
Sbjct: 997 PTAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVXDIKEKLCYVALDFEQEMATAA 818
Query: 234 SSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRK 293
SSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSF+GMESAGIHETTYNSIMKCD+DIRK
Sbjct: 817 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRK 638
Query: 294 DLYANNVMSGGTTMYPGIADRMQKEITALAP 324
DLYAN V+SGGTTM+PGIADRMQKEITALAP
Sbjct: 637 DLYANTVLSGGTTMFPGIADRMQKEITALAP 545
Score = 109 bits (273), Expect(3) = e-121, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -3
Query: 325 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
STMKIK IAPPERKYSVWIGGSILASLSTFQQMWI+KQEYDE+GPSIVHRKCF
Sbjct: 543 STMKIKXIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 385
Score = 70.5 bits (171), Expect(3) = e-121, Method: Compositional matrix adjust.
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -1
Query: 142 LSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPH 175
LSLYASGRTTGIVLDSGDGVTH VPIYEGYALPH
Sbjct: 1094 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPH 993
>12322
Length = 849
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 150/217 (69%)
Frame = +1
Query: 161 VTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCY 220
VTH VP+YEG+A+PH+IMR+D+AGRD+T YL +L + G TTAE E+V+ IKE+ CY
Sbjct: 1 VTHAVPVYEGFAMPHSIMRVDVAGRDVTRYLRLLLRKEGMDLHTTAEFEVVKHIKERTCY 180
Query: 221 VALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETT 280
++++ E S + + SY LPDG + +G RFR PE LF+P IG E GIHE
Sbjct: 181 LSINPLKE----ESVDTEKVSYTLPDGNTVEVGPARFRAPELLFRPDLIGEECEGIHEVL 348
Query: 281 YNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 340
SI K D+D+RK LY+N V+SGG+T++ G DR+ E+ LAP +KI+I AP ER YS
Sbjct: 349 SYSIQKSDVDLRKTLYSNIVLSGGSTLFKGFGDRLLSELKKLAPKDIKIRISAPQERLYS 528
Query: 341 VWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
WIG SILASL TF++MW++K+EY E G +HRK F
Sbjct: 529 TWIGXSILASLDTFRKMWVSKREYHEEGVKAIHRKTF 639
>00608
Length = 1930
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 181/333 (54%), Gaps = 32/333 (9%)
Frame = +3
Query: 77 IITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV 136
II +WD ME+ + + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+
Sbjct: 3 IIDDWDLMERFYEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI 182
Query: 137 AIQAVLSLYASGRT--------TGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188
A+QAVL+L AS + TG V+DSGDGVTH +P+ EGY + I + +AGRD+T
Sbjct: 183 AVQAVLALAASWTSRNVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 362
Query: 189 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASS-SSLEKSYELPD- 246
++ ++L ER E + IKE+ YV D E + + S K YE +
Sbjct: 363 YFIQQLLREREVGIPPEQSLETAKAIKERFSYVCPDIAKEFSKYDTDPSKWMKKYEGRNT 542
Query: 247 --GQV--ITIGNERFRCPETLFQPSFIGME-SAGIHETTYNSIMKCDIDIRKDLYANNVM 301
Q+ + +G ERF PE F P F + + I + + I C ID+R+ LY N V+
Sbjct: 543 ISKQLFSVDVGYERFLGPEIFFHPEFSNPDFTMPISDVVDDVIQNCPIDVRRGLYKNIVL 722
Query: 302 SGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGG 345
SGG+TM+ ++Q+++ + P +++++I ++Y+VW GG
Sbjct: 723 SGGSTMFRDFGRKIQRDVKRVVDGRLKASEELSQGRIKPKPIEVQVITHHMQRYAVWFGG 902
Query: 346 SILASLSTFQQMWITKQEYDEAGPSIV-HRKCF 377
S+LAS F Q+ TK +YDE GPSI H F
Sbjct: 903 SMLASTPEFYQVCHTKADYDEHGPSICRHNPVF 1001
>01436
Length = 2563
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 121/200 (60%), Gaps = 12/200 (6%)
Frame = +3
Query: 187 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPD 246
+T YL+K+L RGY+F +A+ E VR +KEKLCY A D E E A ++ L + Y LPD
Sbjct: 3 ITRYLIKLLLLRGYAFNHSADFETVRMLKEKLCYTAYDVEQEQKLALETTVLVEPYILPD 182
Query: 247 GQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTT 306
G+VI +G ERF PE LFQP I ++ G+ E +N+I D+DIR D Y + V+SGG+T
Sbjct: 183 GRVIKVGGERFEAPEALFQPHLINVDGVGVAELLFNTIQAADMDIRPDFYKHIVLSGGST 362
Query: 307 MYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILAS-LSTF 354
MYPG+ R+++EI L S KI+I PP RK+ V++GGS+ A +
Sbjct: 363 MYPGLPSRLEREIKQLYLERVLXGDTSRLSKFKIRIEDPPRRKHMVFLGGSVXADIMKDK 542
Query: 355 QQMWITKQEYDEAGPSIVHR 374
W+ + EY+E G ++ +
Sbjct: 543 DDFWMMRSEYEEMGVKVLDK 602
>11487
Length = 771
Score = 95.1 bits (235), Expect(3) = 8e-42, Method: Compositional matrix adjust.
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = -2
Query: 335 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
PERKYSVWIGGSILASLSTFQQMWI+KQEYDE+GPSIVHRKCF
Sbjct: 602 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 474
Score = 82.4 bits (202), Expect(3) = 8e-42, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -1
Query: 278 ETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKE 318
ET YNSIMKCD+DIRKDLYAN V+SGGTTM+PGIADRMQKE
Sbjct: 771 ETAYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKE 649
Score = 32.0 bits (71), Expect(3) = 8e-42, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3
Query: 317 KEITALAPSTMKIKIIAP 334
+ ITALAP TMKIKIIAP
Sbjct: 655 ERITALAPPTMKIKIIAP 602
>19721
Length = 757
Score = 100 bits (248), Expect(2) = 4e-33, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 77/120 (64%), Gaps = 8/120 (6%)
Frame = +2
Query: 77 IITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV 136
++ +WD E+ + LR PE+H LLTE PLN NRE +IMFETFN+P +Y+
Sbjct: 2 VVEDWDLHERFMEQAIFKYLRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNIPGLYI 181
Query: 137 AIQAVLSLYASGRT--------TGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188
A+QAVL+L AS + TG V+DSGDGVTH +P+ +GY + AI + +AGRD+T
Sbjct: 182 AVQAVLALAASWTSRPPNERTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDIT 361
Score = 59.3 bits (142), Expect(2) = 4e-33, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Frame = +3
Query: 209 EIVRDIKEKLCYVALDFENEMATAAS-------SSSLEKSYELPDGQVITIGNERFRCPE 261
E + IKE+ YV D E A S + + S + PD +G E+F PE
Sbjct: 420 EAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKAHKMSGSSKYPDFS-FDVGYEKFLGPE 596
Query: 262 TLFQPSFI-GMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 308
F+P F+ G A I + I C ID R+ LY N V+SGG++M+
Sbjct: 597 VFFRPEFVNGDFQASISDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMF 740
>36954
Length = 892
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 9/189 (4%)
Frame = -1
Query: 5 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 64
DE ALV D GS +AG+AG+D P+A P+ VG + D+ E +
Sbjct: 817 DEVGALVFDIGSYSFRAGYAGEDTPKAEIPTHVGVMEDIETTMDTDGGDAPPQPEKKYLI 638
Query: 65 GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPK 115
+ +K+P ++ G++ +WD EK+ + + ++ HP L++E N K
Sbjct: 637 DTVYMKHPRKGMHLNSFLKDGMVEDWDMFEKVIDYAYNRSIKSESCLHPLLMSEPAWNTK 458
Query: 116 ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPH 175
A REK+T+IMFE +N+PA ++ +VLS +A+GR+T ++LDSG T VP+Y+GY L
Sbjct: 457 AKREKLTEIMFEKYNIPAFFLRKNSVLSAFANGRSTALILDSGATHTSAVPVYDGYVLTQ 278
Query: 176 AIMRLDLAG 184
I++ LAG
Sbjct: 277 GIVKSPLAG 251
>32273
Length = 265
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
Frame = -2
Query: 66 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPTLLTEAPLNPKANREKMTQI 124
+++++YP+EHGI+ +W+DME+IW + + ++L+ EEHP LLTEAPLNP+ NREK +I
Sbjct: 264 LMSIRYPMEHGIVKDWNDMERIWQYIYSKDQLQTFSEEHPVLLTEAPLNPRRNREKAAEI 85
Query: 125 MFETFNVPAMYVAIQAVLSLYASGRTTG 152
F+TFNVPA+++++QAVLSLYA+GR TG
Sbjct: 84 FFDTFNVPALFISMQAVLSLYATGRITG 1
>18926
Length = 478
Score = 110 bits (275), Expect(2) = 2e-25, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
Frame = +1
Query: 275 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 334
G+ S+ CDIDIR LY + GG ++ G +R+ ++++ P +M++KIIA
Sbjct: 97 GVGHVVTTSVGMCDIDIRPSLYGGVIAVGGNSLIQGFTERLNRDLSNKTPPSMRLKIIAA 276
Query: 335 P---ERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKC 376
ER++S WIGGSILASL +FQQMW++KQEY+E G S V RKC
Sbjct: 277 ASTAERRFSSWIGGSILASLGSFQQMWVSKQEYEEGGKSCVERKC 411
Score = 22.7 bits (47), Expect(2) = 2e-25, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Frame = +3
Query: 252 IGNERFRCPETLFQPSFI----GMESAG 275
+ERF+ E LF PS I G SAG
Sbjct: 15 FASERFKVCEGLFDPSVIKESQGNSSAG 98
>13361
Length = 1217
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Frame = +3
Query: 219 CYVALDFENEMATAASS-SSLEKSYE-----LPDGQVITIGNERFRCPETLFQPSFIGME 272
CY+ D E A S S ++Y + +G ERF PE F P F +
Sbjct: 42 CYICPDIAKEFAKYDSEPSKWIRNYTGMNTVTKQAFNVDVGYERFLGPEIFFHPEFSNPD 221
Query: 273 -SAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITA---------- 321
+ + E N I C ID+R+ LY N V+SGG+TM+ R+Q++I
Sbjct: 222 FTIPLSEIVDNVIQNCPIDVRRHLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISE 401
Query: 322 ------LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSI 371
+ P + +++I ++Y+VW GGS+LAS F Q+ TK Y+E GPSI
Sbjct: 402 NLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYGPSI 569
>17032
Length = 2938
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -1
Query: 343 IGGSILASLSTFQQMWITKQEYDEAGPSIV 372
GGS+LAS F Q+ TK +YDE GPSI
Sbjct: 2938 FGGSMLASTPEFYQVCHTKADYDEHGPSIC 2849
>06084
Length = 1739
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 335 PERKYSVWIGGSILASLS 352
P+RKY VW+ G I SLS
Sbjct: 981 PQRKYGVWVRGGITRSLS 1034
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|33942059|ref|NP_033384.2| delta isoform of regulatory
subunit B56, protein phosphatase 2A [Mus musculus]
(594 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00299 631 0.0
01605 566 e-165
05988 230 1e-93
17656 29 4.3
>00299
Length = 1481
Score = 631 bits (1628), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 308/395 (77%), Positives = 340/395 (86%)
Frame = +1
Query: 23 SSSKDGGGENTDEAXXXXXXXXXXXXXXXXXXXXXXXQLSKIKYSGGPQIVKKERRQSSF 82
S+K G E+T+ A +SK+KY G P I KK++RQSS
Sbjct: 112 GSAKSTGKESTENADSEAAKRKNPSQTGNADTHPPPTAISKLKYQGPPHI-KKDKRQSSS 288
Query: 83 PFNLNKNRELQKLPALKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKCKEVKRAGLN 142
FN++KNRELQKL LKD+ EREELF+QKLRQC VLFDFV DPLSDLK KEVKRA LN
Sbjct: 289 RFNVSKNRELQKLALLKDATPAEREELFVQKLRQCIVLFDFVQDPLSDLKWKEVKRAALN 468
Query: 143 EMVEYITHSRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 202
EMVEY+T +R V+TEAIYPEA+TMF+VNLFRTLPPSSNP+GAEFDPEEDEPTLEAAWPHL
Sbjct: 469 EMVEYVTQNRGVITEAIYPEAITMFAVNLFRTLPPSSNPSGAEFDPEEDEPTLEAAWPHL 648
Query: 203 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFL 262
QLVYEFFLRFLESPDFQPN K+YIDQKFVL LLDLFDSEDPRERDFLKTILHRIYGKFL
Sbjct: 649 QLVYEFFLRFLESPDFQPNTVKRYIDQKFVLQLLDLFDSEDPRERDFLKTILHRIYGKFL 828
Query: 263 GLRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKVFLVRVLLPL 322
GLRA+IR+ IN+IFY FIYETEHHNGIAELLEILGSIINGFALPLKEEHK+FL++VLLPL
Sbjct: 829 GLRAFIRKHINNIFYSFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 1008
Query: 323 HKVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDV 382
HKVKSLSVYHPQLAYCVVQFLEK+ +LTE VI+GLLK+WPK HSPKEVMFLNELEEILDV
Sbjct: 1009HKVKSLSVYHPQLAYCVVQFLEKDPNLTEQVIMGLLKYWPKVHSPKEVMFLNELEEILDV 1188
Query: 383 IEPSEFSKVMEPLFRQLAKCVSSPHFQVAERALYY 417
IEP+EF+KVM PLF+QLAKCVSSPHFQVAERALY+
Sbjct: 1189IEPAEFTKVMVPLFKQLAKCVSSPHFQVAERALYF 1293
Score = 102 bits (255), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = +3
Query: 417 YWNNEYIMSLISDNAARILPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLF 473
+WNNEYI+SLISDN + I+P+MFPALY+ SK HWNKTIHGLIYNALKLFMEMNQKL
Sbjct: 1290 FWNNEYILSLISDNVSSIMPLMFPALYK-SKEHWNKTIHGLIYNALKLFMEMNQKLL 1457
>01605
Length = 971
Score = 566 bits (1459), Expect(2) = e-165, Method: Compositional matrix adjust.
Identities = 271/310 (87%), Positives = 289/310 (93%)
Frame = -3
Query: 105 EREELFIQKLRQCCVLFDFVSDPLSDLKCKEVKRAGLNEMVEYITHSRDVVTEAIYPEAV 164
EREELF+QK+RQC VLFDFV DPLSDLK KEVKRA LNEMVE++T +R VVTE IYPEA+
Sbjct: 969 EREELFVQKIRQCSVLFDFVQDPLSDLKWKEVKRAALNEMVEFVTQNRGVVTEPIYPEAI 790
Query: 165 TMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAK 224
TMFSVNLFRTLPPSSNP GAEFDPEEDEPTLEAAWPHLQL+YEFFLRFLESPDFQPN AK
Sbjct: 789 TMFSVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLIYEFFLRFLESPDFQPNTAK 610
Query: 225 KYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETE 284
+YIDQKFVL LLDLFDSEDPRERDFLKTILHRIYGKFLGLRA+IR+ IN+IFY FIYETE
Sbjct: 609 RYIDQKFVLQLLDLFDSEDPRERDFLKTILHRIYGKFLGLRAFIRKHINNIFYSFIYETE 430
Query: 285 HHNGIAELLEILGSIINGFALPLKEEHKVFLVRVLLPLHKVKSLSVYHPQLAYCVVQFLE 344
HHNGIAELLEILGSIINGFALPLKEEHK FL++VLLPLHKVKSLSVYHPQLAYCVVQFLE
Sbjct: 429 HHNGIAELLEILGSIINGFALPLKEEHKTFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLE 250
Query: 345 KESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVS 404
K+ SLTE VI+GLLKFWPK HSPKEVMFLNELEEILDVIEP+EF+KVM PLF+QLAKCVS
Sbjct: 249 KDPSLTEQVIIGLLKFWPKVHSPKEVMFLNELEEILDVIEPAEFTKVMGPLFKQLAKCVS 70
Query: 405 SPHFQVAERA 414
SPHFQ R
Sbjct: 69 SPHFQNDTRV 40
Score = 35.8 bits (81), Expect(2) = e-165, Method: Compositional matrix adjust.
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -1
Query: 452 KTIHGLIYNALKLFME 467
+TIHGLIYNALKLFME
Sbjct: 56 RTIHGLIYNALKLFME 9
>05988
Length = 569
Score = 230 bits (587), Expect(2) = 1e-93, Method: Compositional matrix adjust.
Identities = 111/124 (89%), Positives = 119/124 (95%)
Frame = +2
Query: 294 EILGSIINGFALPLKEEHKVFLVRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPV 353
EILGSIINGFALPLKEEHK FL++VLLPLHKVKSLSVYHPQLAYCVVQFLEK+ SLTE V
Sbjct: 2 EILGSIINGFALPLKEEHKTFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDPSLTEQV 181
Query: 354 IVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAER 413
I+GLLKFWPK HSPKEVMFLNELEEILDVIEP+EF+KVM PLF+QLAKCVSSPHFQVAER
Sbjct: 182 IIGLLKFWPKVHSPKEVMFLNELEEILDVIEPAEFTKVMGPLFKQLAKCVSSPHFQVAER 361
Query: 414 ALYY 417
ALY+
Sbjct: 362 ALYF 373
Score = 132 bits (331), Expect(2) = 1e-93, Method: Composition-based stats.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Frame = +1
Query: 417 YWNNEYIMSLISDNAARILPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDC 476
+WNNEYI+SLISDN + ++P+MFPALY+ SK HWNKTIHGLIYNALKLFMEMNQKLFDDC
Sbjct: 370 FWNNEYILSLISDNVSSVMPLMFPALYK-SKEHWNKTIHGLIYNALKLFMEMNQKLFDDC 546
Query: 477 TQQYKAE 483
TQQYKAE
Sbjct: 547 TQQYKAE 567
>17656
Length = 444
Score = 29.3 bits (64), Expect = 4.3, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 194 TLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLD 237
T + +W ++Q ++ ++ SPD QP D ++ LALLD
Sbjct: 386 TRDLSWDYIQARHQVYVDITGSPDVQP-------DWRYCLALLD 276
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|40556608|ref|NP_032328.2| heat shock protein 1, beta
[Mus musculus]
(724 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01628 706 0.0
15623 309 1e-92
11278 223 3e-58
27487 160 1e-39
25874 80 4e-15
>01628
Length = 2109
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/450 (76%), Positives = 388/450 (86%), Gaps = 1/450 (0%)
Frame = -3
Query: 276 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 335
Y ++EELNKTKP+WTRNPDDIT EEY EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI
Sbjct: 1969 YTEEEELNKTKPLWTRNPDDITAEEYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 1790
Query: 336 PRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 395
P+RAPFD+FENKKKKNNIKLYVRRVFIMD+C+++IPEYLNF++GVVDSEDLPLNISREML
Sbjct: 1789 PKRAPFDMFENKKKKNNIKLYVRRVFIMDNCEDIIPEYLNFVKGVVDSEDLPLNISREML 1610
Query: 396 QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 455
QQSKILKVIRKN+VKKC+EL +LAEDK+NY KFYE F+KNLKLGIHEDSTNR+++S+ L
Sbjct: 1609 QQSKILKVIRKNLVKKCMELIDDLAEDKDNYNKFYEQFAKNLKLGIHEDSTNRKKISDFL 1430
Query: 456 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 515
RYH+SQS DEM + EYVSRMK+ QK IYYITGE++E V NSAFVERV+KRGFEV+YM +
Sbjct: 1429 RYHSSQSADEMVTFKEYVSRMKDNQKDIYYITGETREAVQNSAFVERVKKRGFEVLYMVD 1250
Query: 516 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKV 575
PIDEYCVQQLKE+DGK+LV VT LCK MKEILDKKV
Sbjct: 1249 PIDEYCVQQLKEYDGKNLVCVTKEGLELPEDEAEKKKFEEAKAEFEGLCKAMKEILDKKV 1070
Query: 576 EKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIV 635
EKVT+S RLVSSPCCIVTS YGW+ANMERIMKAQALRD STMGYM AKKH EINPDHPIV
Sbjct: 1069 EKVTVSQRLVSSPCCIVTSQYGWSANMERIMKAQALRDTSTMGYMAAKKHFEINPDHPIV 890
Query: 636 ETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEV 695
+TL+ K +ADKNDK+VKDL +LLFETALLSSGF+LEDP +H+NRI+RM+KLGLGIDED+
Sbjct: 889 KTLKVKCDADKNDKSVKDLCMLLFETALLSSGFTLEDPTSHANRIHRMVKLGLGIDEDDS 710
Query: 696 TAEEPSAAVPDEIPPLEGDE-DASRMEEVD 724
T E A D++PPLEGDE DASRMEEVD
Sbjct: 709 TPEAAEAPA-DDMPPLEGDEDDASRMEEVD 623
>15623
Length = 2811
Score = 309 bits (792), Expect(2) = 1e-92, Method: Compositional matrix adjust.
Identities = 145/185 (78%), Positives = 168/185 (90%)
Frame = -1
Query: 35 NKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMT 94
+EIFLRELISN+SDALDKIRYESLTDPSKLD+GK+L I I+P+ + +TLT+ D+GIGMT
Sbjct: 588 QQEIFLRELISNSSDALDKIRYESLTDPSKLDAGKDLHIRIVPDKERKTLTIEDSGIGMT 409
Query: 95 KADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQ 154
KADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVA++VVV +K+NDDEQ
Sbjct: 408 KADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADRVVVESKNNDDEQ 229
Query: 155 YAWESSAGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPIT 214
Y WESSAGGSFT+ A G P+GRGT++ L +KEDQ EYLEERR+KEV+KKHSQFIGYPI
Sbjct: 228 YTWESSAGGSFTIAAPTGTPMGRGTRITLFMKEDQQEYLEERRIKEVIKKHSQFIGYPIK 49
Query: 215 LYLEK 219
L +EK
Sbjct: 48 LLVEK 34
Score = 49.7 bits (117), Expect(2) = 1e-92, Method: Compositional matrix adjust.
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2
Query: 14 TFAFQAEIAQLMSLIINTFYSNKEI 38
TFAFQAEIAQLMSLIINTFYSNK+
Sbjct: 650 TFAFQAEIAQLMSLIINTFYSNKKF 576
>11278
Length = 988
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 147/209 (70%), Gaps = 4/209 (1%)
Frame = +1
Query: 15 FAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKID 74
FAFQAE+ ++M LIIN+ Y NKEIFLRELISNASDALDKIR+ SLT+ L + EL I
Sbjct: 265 FAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRFMSLTNKDVLHATDELSIK 444
Query: 75 IIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADI---SMIGQFGV 131
I + + L + DTGIGMT DL+ NLGTIAKSGT F+ + + +IGQFGV
Sbjct: 445 IKADTENHVLHVTDTGIGMTYNDLVKNLGTIAKSGTSDFLAKMGEASPTELNDLIGQFGV 624
Query: 132 GFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQT 190
GFYS++LVA++VVV +KHNDDEQY WES A SF+V D G +GRGT + LHLKE+
Sbjct: 625 GFYSSFLVADRVVVTSKHNDDEQYVWESDA-ESFSVAKDPRGNTLGRGTTISLHLKEEAH 801
Query: 191 EYLEERRVKEVVKKHSQFIGYPITLYLEK 219
++LE + +VKK+SQFI + I ++ K
Sbjct: 802 DFLEAGTLTSLVKKYSQFINFNIYMWSSK 888
>27487
Length = 377
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 109/124 (87%)
Frame = -3
Query: 395 LQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSEL 454
LQQ+KILKVI+KNIVKKCLE+F+E+AE+ ++YKKFYE FSKNLKLGIHED+TNR +L +L
Sbjct: 372 LQQNKILKVIKKNIVKKCLEMFAEIAENNDDYKKFYEQFSKNLKLGIHEDTTNRTKLVDL 193
Query: 455 LRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMT 514
+R+HTS+SG++ SL EY++RMKE QK I+YITGES+ V S F+E++RK+G+EV+Y+
Sbjct: 192 MRFHTSKSGEDQISLKEYIARMKEGQKDIFYITGESRAAVQASPFIEQLRKKGYEVLYLV 13
Query: 515 EPID 518
+PID
Sbjct: 12 DPID 1
>25874
Length = 476
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = +1
Query: 125 MIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGEPIGRGTKVILH 184
+IGQFGVGFYS ++V ++V V TK + A + S+ GS E + RGTK+++H
Sbjct: 1 LIGQFGVGFYSTFMVGDRVDVFTKSHQPGSPALKWSSDGSGAYEVSEAEGVQRGTKIVVH 180
Query: 185 LKEDQTEYLEERRVKEVVKKHSQFIGYPITL 215
LK D ++ +E + VVKK+S F+G PI L
Sbjct: 181 LKGDSYDFAKEEIITGVVKKYSNFVGVPIYL 273
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|5457150|gb|AAD43813.1|AF164349_1 Na,K-ATPase alpha-4
subunit [Mus musculus]
(740 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00499 974 0.0
14773 357 1e-98
06342 256 3e-68
08160 199 5e-51
12151 85 1e-24
36566 108 6e-24
03937 103 3e-22
33697 74 9e-21
17925 89 8e-18
29829 74 2e-13
28890 72 8e-13
13525 68 2e-11
04985 57 4e-08
14321 48 2e-05
07486 39 0.006
10129 31 2.0
>00499
Length = 4026
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/676 (69%), Positives = 550/676 (81%), Gaps = 2/676 (0%)
Frame = +2
Query: 67 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDKTVYEADTSEEQTT 126
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAH+WFD + EADTS++Q+
Sbjct: 44 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDGRIVEADTSDDQSN 223
Query: 127 GKTFPKSSDTWFYLARIAGLCNRADFKPHQESVPIAKRATTGDASESALLKFIEQSYSPV 186
T+ +S TW L+R+A LCNRA+FK +Q++VPI KR GDASESALLK +E S V
Sbjct: 224 A-TYSRSDPTWMALSRVAMLCNRAEFKGNQDNVPILKRECNGDASESALLKCVELSIGHV 400
Query: 187 SEMRQKNPKVAEIPFNSTNKYQMSIHLLED-NSEAHVLLMKGAPERIFDFCSSFLLNGQE 245
+E R++N K+ EIPFNS+NKYQ+SIH ED + ++L+MKGAPERI D CS+ LLNG+E
Sbjct: 401 TEYRRRNEKIVEIPFNSSNKYQVSIHETEDPDDPRYLLVMKGAPERIMDRCSTILLNGKE 580
Query: 246 YPMDEEMKTDFQNAYIELGGLGERVLGFCFLNLP-SNFSKGFQFNTDELNFPMENLCFAG 304
P+D+ + F AY+ELGGLGERVLGFC LP F G++F+ + NFP+ L F G
Sbjct: 581 QPLDDNFREAFNAAYLELGGLGERVLGFCDYFLPVDQFPPGYEFDPEGPNFPITGLRFVG 760
Query: 305 LISMIDPPRTAVPDAVSKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNDTAEDIAAR 364
L++MIDPPR AVPDAV KCRSAGIKVIMVTGDHPITAKAIA+ VGIISEG+ T EDIA+
Sbjct: 761 LMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIARGVGIISEGSKTVEDIASE 940
Query: 365 LNIPISQVNNKSVKAIVVHGSELKDMESQQLDDILKSYKEIVFARTSPQQKLIIVEGCQR 424
IP+ +V+ + KA V+HG +L+DM Q+D+IL+++ EIVFARTSPQQKLIIVEGCQR
Sbjct: 941 RGIPVEEVDPREAKAAVIHGGDLRDMTPAQIDEILRNHSEIVFARTSPQQKLIIVEGCQR 1120
Query: 425 LGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQAADMILLDDNFASIVTGVEEGRL 484
G IVAVTGDGVNDSPALKKADIG+AMGI GSDVSKQAADMILLDDNFASIVTGVEEGRL
Sbjct: 1121QGQIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRL 1300
Query: 485 IFDNLKKSIAYTLTSNIPEITXXXXXXXXXXXXXXGTITILCIDLGTDMVPAISLAYESP 544
IFDNLKKSIAYTLTSNIPEI+ GTITILCIDLGTDMVPAISLAYE
Sbjct: 1301IFDNLKKSIAYTLTSNIPEISPFLLFILADIPLPLGTITILCIDLGTDMVPAISLAYEKA 1480
Query: 545 ESDIMKRLPRNPKTDNLVNNRLIGMAYGQIGMIQALAGFFTYFVILAENGFKPLDLLGIR 604
E+DIMKR PR+P D LVN RLI MAYGQIGMIQA AGFFTYFVI+ ENGF LLGIR
Sbjct: 1481ENDIMKRQPRDPVKDKLVNERLISMAYGQIGMIQASAGFFTYFVIMGENGFWYDRLLGIR 1660
Query: 605 LYWDDTQLNDLEDSYGQQWTYEQRKVVEFTCQTAFFISIVIVQWADLIICKTRRNSLFKQ 664
+ WD +NDLEDSYGQ+WTY QRK +E+TC TAFF+SIVIVQWAD+IICKTRR SLF+Q
Sbjct: 1661MEWDSRGVNDLEDSYGQEWTYSQRKKLEYTCHTAFFVSIVIVQWADIIICKTRRLSLFQQ 1840
Query: 665 GMKNKILIFGLLEETVLAAFLSYVPGMDVSLRMYPLKINWWFCALPYSVLIFVYDEIRKL 724
GMKNK LIFG+ ET LAAFL Y PG+D LRMYPL++ WWF A+P+S+ IF+YDE RKL
Sbjct: 1841GMKNKHLIFGIFFETALAAFLCYCPGLDKGLRMYPLRLTWWFTAVPFSLTIFIYDECRKL 2020
Query: 725 IIRRRPGGWLEKETYY 740
I+RR PGG++E+ETYY
Sbjct: 2021ILRRNPGGFVERETYY 2068
>14773
Length = 794
Score = 357 bits (915), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 201/265 (75%)
Frame = +2
Query: 456 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITXXXXXXXXXX 515
SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI+
Sbjct: 2 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGT 181
Query: 516 XXXXGTITILCIDLGTDMVPAISLAYESPESDIMKRLPRNPKTDNLVNNRLIGMAYGQIG 575
G ITIL IDLGTDMVPAISLAYE ESDIMKR PR +D LVN RLI M+YGQIG
Sbjct: 182 PLPLGVITILFIDLGTDMVPAISLAYEMAESDIMKRPPRT-ISDRLVNERLIAMSYGQIG 358
Query: 576 MIQALAGFFTYFVILAENGFKPLDLLGIRLYWDDTQLNDLEDSYGQQWTYEQRKVVEFTC 635
M+QALAGF+ + ++ ++GF DL GIR +WD +NDLEDSYGQ WT QR VE +
Sbjct: 359 MMQALAGFYAWILVFGQSGFMVRDLPGIRSFWDSANINDLEDSYGQNWTKAQRMDVELSG 538
Query: 636 QTAFFISIVIVQWADLIICKTRRNSLFKQGMKNKILIFGLLEETVLAAFLSYVPGMDVSL 695
T FFI+IV+VQW+D+IICKTRR S+F QGM N +L FG+ ET LA LSY PG+DV+L
Sbjct: 539 YTVFFITIVLVQWSDIIICKTRRLSVFHQGMSNHVLTFGIFFETSLAVLLSYTPGVDVAL 718
Query: 696 RMYPLKINWWFCALPYSVLIFVYDE 720
R PL+ WW A+P+ VLIFVYDE
Sbjct: 719 RTRPLRFEWWLAAIPFQVLIFVYDE 793
>06342
Length = 2428
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 183/605 (30%), Positives = 296/605 (48%), Gaps = 48/605 (7%)
Frame = +2
Query: 1 PIATEIEHFIHLITAVAVFLGVSFFWLSI------ILGYTWLDAVIFLIGIIVANV---- 50
P+ +++ F + ++ V + ++ + ++I G +W+ I+ I VA
Sbjct: 314 PLQQKLDEFSNQLSKVITIICIAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAI 493
Query: 51 PEGXXXXXXXXXXXXXKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLW 110
PEG +RMA+KN +V++L +VETLG TS ICSDKTGTLT N+M+V L+
Sbjct: 494 PEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKLF 673
Query: 111 FDKTV--YEADTSEEQTTGKTFP------------KSSD--TWFYLARIAGLCNRADFKP 154
+ + T++ + TG T+ K+SD L I G+CN +
Sbjct: 674 IFSQIDTNQIKTTQFEVTGSTYAPDGELYQNGKKVKASDYPGLEELCTICGMCNDSSVDY 853
Query: 155 HQESVPIAKRATTGDASESALLKFIEQSYSPVSEMRQKNPKVAEIPFN------------ 202
++ K G+A+E+AL E+ ++ N + N
Sbjct: 854 NEAKTQYEK---VGEATETALTVLAEKLNFYNTDKSSLNKREMGTVCNHVIQDMWRKEFT 1024
Query: 203 ---STNKYQMSIHLLEDNSE----AHVLLMKGAPERIFDFCSSFLLNGQEYPMDEEMKTD 255
S ++ MS+ + + + KGAPE + D C+ + + PM +K +
Sbjct: 1025LEFSRDRKSMSVFCVPNKPTRVPGGARMFAKGAPEGLLDRCTHVRIGNNKVPMSPAIKNE 1204
Query: 256 FQNAYIELGGLGERVLGFCFLNLPSNFSKGFQFNTDELNFPME---NLCFAGLISMIDPP 312
++ G G L L N + + ++ +E N+ F G++ M+DPP
Sbjct: 1205IMK-LTKIYGTGRDTLRCLALATIDNPPRREDMDLEDSRKFIEYETNMTFVGVVGMLDPP 1381
Query: 313 RTAVPDAVSKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNDTAEDIAARLNIPISQV 372
R V ++ CR+AGI+VI++TGD+ TA+AI + +G+ SE +T
Sbjct: 1382REEVMASIKNCRAAGIRVIVITGDNKATAEAICRRIGVFSESENT--------------- 1516
Query: 373 NNKSVKAIVVHGSELKDMESQQLDDILKSYKEIVFARTSPQQKLIIVEGCQRLGAIVAVT 432
+ + G E ++ + D + +FAR P K IVE Q G I A+T
Sbjct: 1517-----EGLAYTGREFDELPPE--DQRAAVMRARLFARVEPAHKSKIVEYLQAEGEISAMT 1675
Query: 433 GDGVNDSPALKKADIGIAMGITGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKS 492
GDGVND+PALKKA+IGIAMG +G+ V+K A++M+L DDNF++IV VEEGR I++N+K+
Sbjct: 1676GDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQF 1852
Query: 493 IAYTLTSNIPEITXXXXXXXXXXXXXXGTITILCIDLGTDMVPAISLAYESPESDIMKRL 552
I Y ++SNI E+ + +L ++L TD PA +L + P+ DIM++
Sbjct: 1853IRYLISSNIGEVVCIFLTAALGIPEALIPVQLLWVNLVTDGFPATALGFNPPDLDIMQKP 2032
Query: 553 PRNPK 557
PRNP+
Sbjct: 2033PRNPR 2047
>08160
Length = 459
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 113/139 (81%)
Frame = +2
Query: 67 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDKTVYEADTSEEQTT 126
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAH+WFD + EADTS++Q+
Sbjct: 44 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDGRIVEADTSDDQSN 223
Query: 127 GKTFPKSSDTWFYLARIAGLCNRADFKPHQESVPIAKRATTGDASESALLKFIEQSYSPV 186
T+ ++ TW LAR+ LCNRA+FK +Q++VPI KR GDASESALLK +E S V
Sbjct: 224 A-TYSRTDVTWMALARVGMLCNRAEFKGNQDNVPILKRECNGDASESALLKAVELSIGQV 400
Query: 187 SEMRQKNPKVAEIPFNSTN 205
+E R++N K+ EIPFNS+N
Sbjct: 401 TEYRRRNKKIVEIPFNSSN 457
>12151
Length = 880
Score = 85.1 bits (209), Expect(2) = 1e-24, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Frame = +3
Query: 443 KKADIGIAMGITGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 502
+KAD+G AMGI+G+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 503 EITXXXXXXXXXXXXXXGTITILCIDLGTDMVPAISLAYESPESDIMKRLP---RNPKTD 559
+ I +L ++L D + +++LA E P S+++KR P P
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPYGRTKPLIS 647
Query: 560 NLVNNRLIGMAYGQIGMIQAL 580
+ ++G A+ QI +I L
Sbjct: 648 KTMWKNILGHAFYQILVILLL 710
Score = 47.4 bits (111), Expect(2) = 1e-24, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Frame = +1
Query: 336 DHPITAKAIAKSVGIISEGNDTAEDIAARLNIPISQVNNKSVKAIVVHGSE----LKDME 391
D+ TA++IA GII G+D +V+ G E ++D E
Sbjct: 1 DNVNTARSIASKCGIIQPGDD----------------------GLVLEGKEFNQLIRDAE 114
Query: 392 SQ----QLDDILKSYKEIVFARTSPQQKLIIVE-----GCQRLGAIVAVTGDGVNDSPAL 442
+ ++D++ + + V AR+SPQ K I+V+ +VAVTGDG ND PAL
Sbjct: 115 GEISQEKVDEVWPNLR--VLARSSPQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPAL 288
Query: 443 KK 444
KK
Sbjct: 289 KK 294
>36566
Length = 589
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 94/146 (64%)
Frame = +3
Query: 422 CQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQAADMILLDDNFASIVTGVEE 481
Q+ G +V +TGDGVND+ ALK A+IGI+MG++G+DVSK+A+DMIL+DD+F +I+ +EE
Sbjct: 108 LQQNGLVVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDDFTTILNAIEE 287
Query: 482 GRLIFDNLKKSIAYTLTSNIPEITXXXXXXXXXXXXXXGTITILCIDLGTDMVPAISLAY 541
G+ IF N++ + + L+++I ++ + IL I++ D PA SL
Sbjct: 288 GKGIFYNIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIMDGPPAQSLGV 467
Query: 542 ESPESDIMKRLPRNPKTDNLVNNRLI 567
E + D++K+ PR+ D ++ RLI
Sbjct: 468 EPVDHDVIKQPPRH-VGDPIITRRLI 542
>03937
Length = 1558
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 58/78 (74%)
Frame = -2
Query: 663 KQGMKNKILIFGLLEETVLAAFLSYVPGMDVSLRMYPLKINWWFCALPYSVLIFVYDEIR 722
+QGMKNK LIF FL Y PG+D LRMYPL++ WWF A+P+S+ IF+YDE R
Sbjct: 1557 QQGMKNKHLIFDXFF*DGAGRFLCYCPGLDKGLRMYPLRLTWWFTAVPFSLTIFIYDECR 1378
Query: 723 KLIIRRRPGGWLEKETYY 740
KLI+RR PGG++E+ETYY
Sbjct: 1377 KLILRRXPGGFVERETYY 1324
>33697
Length = 310
Score = 74.3 bits (181), Expect(2) = 9e-21, Method: Composition-based stats.
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = -2
Query: 307 SMIDPPRTAVPDAVSKCRSAGIKVIMVTGDHPITAKA 343
SMIDPPR AVPDAV KCRSAGIKVIMVTGDHPIT++
Sbjct: 204 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITSQG 94
Score = 44.3 bits (103), Expect(2) = 9e-21, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -3
Query: 341 AKAIAKSVGIISEGNDTAEDIAARLNIPISQVN 373
AKAIAK VGIISEG+ T EDI+A IP+ +V+
Sbjct: 101 AKAIAKGVGIISEGSRTVEDISAERGIPVEEVD 3
>17925
Length = 510
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 52/60 (86%)
Frame = +3
Query: 375 KSVKAIVVHGSELKDMESQQLDDILKSYKEIVFARTSPQQKLIIVEGCQRLGAIVAVTGD 434
+ +AIV+HG +LK+M+++ +DDIL ++ EIVFARTSPQQKLIIVEGCQR G IVAVTG+
Sbjct: 315 REAEAIVIHGGDLKNMDAKDIDDILHNFVEIVFARTSPQQKLIIVEGCQRNGQIVAVTGE 494
>29829
Length = 465
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 1/158 (0%)
Frame = -3
Query: 447 IGIAMGITGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITX 506
+G AMGI+G+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+ +
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 507 XXXXXXXXXXXXXGTITILCIDLGTDMVPAISLAYESPESDIMKRLPRNPKTDNLVNNRL 566
I +L ++L D + +++LA E P ++++KR P +T L++
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYG-RTKPLISKT- 107
Query: 567 IGMAYGQIGMIQALAGFFTY-FVILAENGFKPLDLLGI 603
M + +AG Y +I+ FK DL GI
Sbjct: 106 ---------MFKNIAGHSVYQIIIILVILFKGADLFGI 20
>28890
Length = 552
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -3
Query: 1 PIATEIEHFIHLITAVAVFLGVSFFWLSIILGYTWLDAVIFL 42
PIA EI HFIH+IT VAVFLGVSFF ++ ILGY WLDAVIFL
Sbjct: 127 PIAKEIAHFIHIITGVAVFLGVSFFVIAFILGYFWLDAVIFL 2
>13525
Length = 645
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 67 KRMARKNCLVKNLEAVETLGSTSTICSDKTG 97
KRMARKNCLVKNLEAVETLGSTSTICSDKTG
Sbjct: 11 KRMARKNCLVKNLEAVETLGSTSTICSDKTG 103
>04985
Length = 1671
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%)
Frame = -1
Query: 406 VFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQAADM 465
VFAR +P QK ++E Q IV + GDG ND ALK A GI++ + V+
Sbjct: 1608 VFARMAPDQKCALIENLQSYDYIVGMCGDGANDCEALKAAHAGISLSEAEASVAAPFTSR 1429
Query: 466 ILLDDNFASIVTGVEEGR 483
I +N +VT + EGR
Sbjct: 1428 I---NNIECVVTAMREGR 1384
>14321
Length = 568
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 406 VFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAM 451
VFAR +P+QK +I+ + G + + GDG ND ALK AD+G+A+
Sbjct: 266 VFARVAPKQKELIITVLKAQGFVTLMCGDGTNDVGALKHADVGVAL 403
>07486
Length = 763
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = -1
Query: 441 ALKKADIGIAMGITGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 500
AL +AD+GIA+G TG+DV+ +AAD++L+ + + ++ R K+ A+T T +
Sbjct: 742 ALAQADVGIAIG-TGTDVAVEAADIVLMKSDLVDVYAAIKLSR------KQCGAFTSTLS 584
Query: 501 IP 502
+P
Sbjct: 583 LP 578
>10129
Length = 988
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 354 GNDTAEDIAARLNIPISQVNNKSVKAIVVHGSELK-DMESQQLDDILKSYKEIVFARTSP 412
+DT + + I S N + +K ++ +L D++++++DD++ + K +VFART P
Sbjct: 726 SDDTDSEPFCQPKIFFSPQNFEQIKPLIADRRQLX*DLQTKKIDDLIVA*KGVVFARTFP 905
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6671509|ref|NP_031419.1| actin, beta [Mus musculus]
(375 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04742 760 0.0
39562 612 e-175
02757 299 e-123
12322 239 2e-63
00608 199 1e-51
01436 176 2e-44
11487 96 7e-43
19721 100 7e-33
36954 123 1e-28
32273 123 1e-28
18926 111 3e-25
13361 93 2e-19
17032 35 0.044
06132 30 1.5
06084 28 7.5
>04742
Length = 2111
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/374 (96%), Positives = 368/374 (98%)
Frame = +2
Query: 2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
D+D+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 98 DEDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 277
Query: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 278 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 457
Query: 122 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIYEGYALPHAI RLDLA
Sbjct: 458 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYEGYALPHAISRLDLA 637
Query: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYE
Sbjct: 638 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYE 817
Query: 242 LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301
LPDGQVITIGNERFRCPEA+FQPSFLGMES G HETT+NSIMKCDVDIRKDLYANTVLSG
Sbjct: 818 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGXHETTYNSIMKCDVDIRKDLYANTVLSG 997
Query: 302 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
G+TMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 998 GSTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1177
Query: 362 YDESGPSIVHRKCF 375
YDESGPSIVHRKCF
Sbjct: 1178YDESGPSIVHRKCF 1219
>39562
Length = 1438
Score = 612 bits (1577), Expect = e-175, Method: Compositional matrix adjust.
Identities = 291/301 (96%), Positives = 297/301 (98%)
Frame = -2
Query: 75 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 134
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYV
Sbjct: 1437 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 1258
Query: 135 AIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 194
AIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 1257 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 1078
Query: 195 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNER 254
ERGYSFTTTAEREIVRDIKEKL YVALDFEQEM TAASSSSLEKSYELPDGQVITIGNER
Sbjct: 1077 ERGYSFTTTAEREIVRDIKEKLDYVALDFEQEMLTAASSSSLEKSYELPDGQVITIGNER 898
Query: 255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 314
FRCPEA+FQPSFLGMES GIHETT+NSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQ
Sbjct: 897 FRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQ 718
Query: 315 KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 374
KEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 717 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 538
Query: 375 F 375
F
Sbjct: 537 F 535
>02757
Length = 1094
Score = 299 bits (765), Expect(3) = e-123, Method: Compositional matrix adjust.
Identities = 145/151 (96%), Positives = 148/151 (98%)
Frame = -2
Query: 172 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 231
P AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV DIKEKLCYVALDFEQEMATAA
Sbjct: 997 PTAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVXDIKEKLCYVALDFEQEMATAA 818
Query: 232 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRK 291
SSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETT+NSIMKCDVDIRK
Sbjct: 817 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRK 638
Query: 292 DLYANTVLSGGTTMYPGIADRMQKEITALAP 322
DLYANTVLSGGTTM+PGIADRMQKEITALAP
Sbjct: 637 DLYANTVLSGGTTMFPGIADRMQKEITALAP 545
Score = 111 bits (278), Expect(3) = e-123, Method: Compositional matrix adjust.
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = -3
Query: 323 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
STMKIK IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 543 STMKIKXIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 385
Score = 71.6 bits (174), Expect(3) = e-123, Method: Compositional matrix adjust.
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -1
Query: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 173
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPH
Sbjct: 1094 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPH 993
>12322
Length = 849
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 151/217 (69%)
Frame = +1
Query: 159 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 218
VTH VP+YEG+A+PH+I+R+D+AGRD+T YL +L + G TTAE E+V+ IKE+ CY
Sbjct: 1 VTHAVPVYEGFAMPHSIMRVDVAGRDVTRYLRLLLRKEGMDLHTTAEFEVVKHIKERTCY 180
Query: 219 VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETT 278
++++ +E S + + SY LPDG + +G RFR PE LF+P +G E GIHE
Sbjct: 181 LSINPLKE----ESVDTEKVSYTLPDGNTVEVGPARFRAPELLFRPDLIGEECEGIHEVL 348
Query: 279 FNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 338
SI K DVD+RK LY+N VLSGG+T++ G DR+ E+ LAP +KI+I AP ER YS
Sbjct: 349 SYSIQKSDVDLRKTLYSNIVLSGGSTLFKGFGDRLLSELKKLAPKDIKIRISAPQERLYS 528
Query: 339 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
WIG SILASL TF++MW+SK+EY E G +HRK F
Sbjct: 529 TWIGXSILASLDTFRKMWVSKREYHEEGVKAIHRKTF 639
>00608
Length = 1930
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 181/333 (54%), Gaps = 32/333 (9%)
Frame = +3
Query: 75 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 134
I+ +WD ME+ + + LR PE+H LLTE PLN NRE +IMFE+FN P +Y+
Sbjct: 3 IIDDWDLMERFYEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI 182
Query: 135 AIQAVLSLYASGRT--------TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186
A+QAVL+L AS + TG V+DSGDGVTH +P+ EGY + I + +AGRD+T
Sbjct: 183 AVQAVLALAASWTSRNVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 362
Query: 187 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS-SSLEKSYELPD- 244
++ ++L ER E + IKE+ YV D +E + + S K YE +
Sbjct: 363 YFIQQLLREREVGIPPEQSLETAKAIKERFSYVCPDIAKEFSKYDTDPSKWMKKYEGRNT 542
Query: 245 --GQV--ITIGNERFRCPEALFQPSFLGME-SCGIHETTFNSIMKCDVDIRKDLYANTVL 299
Q+ + +G ERF PE F P F + + I + + I C +D+R+ LY N VL
Sbjct: 543 ISKQLFSVDVGYERFLGPEIFFHPEFSNPDFTMPISDVVDDVIQNCPIDVRRGLYKNIVL 722
Query: 300 SGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGG 343
SGG+TM+ ++Q+++ + P +++++I ++Y+VW GG
Sbjct: 723 SGGSTMFRDFGRKIQRDVKRVVDGRLKASEELSQGRIKPKPIEVQVITHHMQRYAVWFGG 902
Query: 344 SILASLSTFQQMWISKQEYDESGPSIV-HRKCF 375
S+LAS F Q+ +K +YDE GPSI H F
Sbjct: 903 SMLASTPEFYQVCHTKADYDEHGPSICRHNPVF 1001
>01436
Length = 2563
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 123/200 (61%), Gaps = 12/200 (6%)
Frame = +3
Query: 185 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 244
+T YL+K+L RGY+F +A+ E VR +KEKLCY A D EQE A ++ L + Y LPD
Sbjct: 3 ITRYLIKLLLLRGYAFNHSADFETVRMLKEKLCYTAYDVEQEQKLALETTVLVEPYILPD 182
Query: 245 GQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTT 304
G+VI +G ERF PEALFQP + ++ G+ E FN+I D+DIR D Y + VLSGG+T
Sbjct: 183 GRVIKVGGERFEAPEALFQPHLINVDGVGVAELLFNTIQAADMDIRPDFYKHIVLSGGST 362
Query: 305 MYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILAS-LSTF 352
MYPG+ R+++EI L S KI+I PP RK+ V++GGS+ A +
Sbjct: 363 MYPGLPSRLEREIKQLYLERVLXGDTSRLSKFKIRIEDPPRRKHMVFLGGSVXADIMKDK 542
Query: 353 QQMWISKQEYDESGPSIVHR 372
W+ + EY+E G ++ +
Sbjct: 543 DDFWMMRSEYEEMGVKVLDK 602
>11487
Length = 771
Score = 96.3 bits (238), Expect(3) = 7e-43, Method: Compositional matrix adjust.
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = -2
Query: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 602 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 474
Score = 84.3 bits (207), Expect(3) = 7e-43, Method: Compositional matrix adjust.
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -1
Query: 276 ETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 316
ET +NSIMKCDVDIRKDLYANTVLSGGTTM+PGIADRMQKE
Sbjct: 771 ETAYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKE 649
Score = 32.0 bits (71), Expect(3) = 7e-43, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3
Query: 315 KEITALAPSTMKIKIIAP 332
+ ITALAP TMKIKIIAP
Sbjct: 655 ERITALAPPTMKIKIIAP 602
>19721
Length = 757
Score = 100 bits (249), Expect(2) = 7e-33, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 76/120 (63%), Gaps = 8/120 (6%)
Frame = +2
Query: 75 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 134
+V +WD E+ + LR PE+H LLTE PLN NRE +IMFETFN P +Y+
Sbjct: 2 VVEDWDLHERFMEQAIFKYLRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNIPGLYI 181
Query: 135 AIQAVLSLYASGRT--------TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186
A+QAVL+L AS + TG V+DSGDGVTH +P+ +GY + AI + +AGRD+T
Sbjct: 182 AVQAVLALAASWTSRPPNERTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDIT 361
Score = 58.2 bits (139), Expect(2) = 7e-33, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Frame = +3
Query: 207 EIVRDIKEKLCYVALDFEQEMATAAS-------SSSLEKSYELPDGQVITIGNERFRCPE 259
E + IKE+ YV D +E A S + + S + PD +G E+F PE
Sbjct: 420 EAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKAHKMSGSSKYPDFS-FDVGYEKFLGPE 596
Query: 260 ALFQPSFL-GMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306
F+P F+ G I + I C +D R+ LY N VLSGG++M+
Sbjct: 597 VFFRPEFVNGDFQASISDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMF 740
>36954
Length = 892
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 107/189 (56%), Gaps = 9/189 (4%)
Frame = -1
Query: 3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
D++ ALV D GS +AG+AG+D P+A P+ VG + D+ E +
Sbjct: 817 DEVGALVFDIGSYSFRAGYAGEDTPKAEIPTHVGVMEDIETTMDTDGGDAPPQPEKKYLI 638
Query: 63 GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 113
+ +K+P ++ G+V +WD EK+ + + ++ HP+L++E N K
Sbjct: 637 DTVYMKHPRKGMHLNSFLKDGMVEDWDMFEKVIDYAYNRSIKSESCLHPLLMSEPAWNTK 458
Query: 114 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 173
A REK+T+IMFE +N PA ++ +VLS +A+GR+T +++DSG T VP+Y+GY L
Sbjct: 457 AKREKLTEIMFEKYNIPAFFLRKNSVLSAFANGRSTALILDSGATHTSAVPVYDGYVLTQ 278
Query: 174 AILRLDLAG 182
I++ LAG
Sbjct: 277 GIVKSPLAG 251
>32273
Length = 265
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
Frame = -2
Query: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
+++++YP+EHGIV +W+DME+IW + + ++L+ EEHPVLLTEAPLNP+ NREK +I
Sbjct: 264 LMSIRYPMEHGIVKDWNDMERIWQYIYSKDQLQTFSEEHPVLLTEAPLNPRRNREKAAEI 85
Query: 123 MFETFNTPAMYVAIQAVLSLYASGRTTG 150
F+TFN PA+++++QAVLSLYA+GR TG
Sbjct: 84 FFDTFNVPALFISMQAVLSLYATGRITG 1
>18926
Length = 478
Score = 111 bits (277), Expect(2) = 3e-25, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
Frame = +1
Query: 273 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
G+ S+ CD+DIR LY + GG ++ G +R+ ++++ P +M++KIIA
Sbjct: 97 GVGHVVTTSVGMCDIDIRPSLYGGVIAVGGNSLIQGFTERLNRDLSNKTPPSMRLKIIAA 276
Query: 333 P---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 374
ER++S WIGGSILASL +FQQMW+SKQEY+E G S V RKC
Sbjct: 277 ASTAERRFSSWIGGSILASLGSFQQMWVSKQEYEEGGKSCVERKC 411
Score = 21.9 bits (45), Expect(2) = 3e-25, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 9/35 (25%)
Frame = +3
Query: 252 NERFRCPEALFQPSFL---------GMESCGIHET 277
+ERF+ E LF PS + G CG H+
Sbjct: 21 SERFKVCEGLFDPSVIKESQGNSSAGGGPCGHHQC 125
>13361
Length = 1217
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 23/176 (13%)
Frame = +3
Query: 217 CYVALDFEQEMATAASS-SSLEKSYE-----LPDGQVITIGNERFRCPEALFQPSFLGME 270
CY+ D +E A S S ++Y + +G ERF PE F P F +
Sbjct: 42 CYICPDIAKEFAKYDSEPSKWIRNYTGMNTVTKQAFNVDVGYERFLGPEIFFHPEFSNPD 221
Query: 271 -SCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------- 318
+ + E N I C +D+R+ LY N VLSGG+TM+ R+Q++I
Sbjct: 222 FTIPLSEIVDNVIQNCPIDVRRHLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISE 401
Query: 319 -----ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 369
+ P + +++I ++Y+VW GGS+LAS F Q+ +K Y+E GPSI
Sbjct: 402 NLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYGPSI 569
>17032
Length = 2938
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -1
Query: 341 IGGSILASLSTFQQMWISKQEYDESGPSIV 370
GGS+LAS F Q+ +K +YDE GPSI
Sbjct: 2938 FGGSMLASTPEFYQVCHTKADYDEHGPSIC 2849
>06132
Length = 1490
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Frame = -2
Query: 220 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF-------LGMESC 272
AL F+Q M T +S + Y P+ + +T+G P Q + LGM
Sbjct: 1015 ALLFQQLMCTTLEKNSHHRLYVSPNHRKLTLGCPVLMLPHDARQDMY*NANCYVLGMTQL 836
Query: 273 GIHETTF 279
GI TTF
Sbjct: 835 GIELTTF 815
>06084
Length = 1739
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 333 PERKYSVWIGGSILASLS 350
P+RKY VW+ G I SLS
Sbjct: 981 PQRKYGVWVRGGITRSLS 1034
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6671557|ref|NP_031482.1| adaptor-related protein
complex AP-1, mu subunit 1 [Mus musculus]
(423 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04701 625 0.0
08361 169 2e-42
06056 69 2e-20
30493 83 2e-16
29016 67 2e-11
28998 65 6e-11
33122 39 0.004
04375 30 1.6
36011 28 5.0
>04701
Length = 4543
Score = 625 bits (1611), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 299/332 (90%), Positives = 317/332 (95%)
Frame = +2
Query: 91 FSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPP 150
F EYFKELEEESIRDNFVIIYELLDE+MDFGYPQTTDSKILQEYITQEG KLE APRPP
Sbjct: 356 FVEYFKELEEESIRDNFVIIYELLDEVMDFGYPQTTDSKILQEYITQEGQKLEV-APRPP 532
Query: 151 ATVTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMPEL 210
VTNAVSWRSEG+KYRKNEVFLDVIE+VNLLVSANGNVLRSEIVGS+KMRVFLSGMPEL
Sbjct: 533 MAVTNAVSWRSEGVKYRKNEVFLDVIESVNLLVSANGNVLRSEIVGSVKMRVFLSGMPEL 712
Query: 211 RLGLNDKVLFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLN 270
RLGLNDKVLF++TGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLN
Sbjct: 713 RLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLN 892
Query: 271 THVKPLIWIESVIEKHSHSRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVG 330
THVKPLIW+ESVIE+H HSR+EYM+KAKSQFKRRSTANNVEI IPVP DADSPKFKTTVG
Sbjct: 893 THVKPLIWVESVIERHVHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADSPKFKTTVG 1072
Query: 331 SVKWVPENSEIVWSVKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGI 390
S K+VPE + ++WS+KSFPGGKE+LMRAHFGLPSVE ED EG+PPIS+KFEIPYFT SGI
Sbjct: 1073SCKYVPEINSVIWSIKSFPGGKEFLMRAHFGLPSVENEDAEGRPPISIKFEIPYFTVSGI 1252
Query: 391 QVRYLKIIEKSGYQALPWVRYITQNGDYQLRT 422
QVRYLKIIEKSGYQALPWVRYITQNGDYQLRT
Sbjct: 1253QVRYLKIIEKSGYQALPWVRYITQNGDYQLRT 1348
Score = 134 bits (336), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 81/91 (89%)
Frame = +3
Query: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWI 60
MSASA+Y+LD+KGKVLI RNYRGD+DMS ++ FMP++ME E++ ++PI++HG V F++I
Sbjct: 87 MSASAIYILDVKGKVLISRNYRGDIDMSVIDKFMPLVMEGEDDSNVTPIISHGNVTFVYI 266
Query: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVF 91
K+NNLYLV+T++KNA V+LVFSFL+K+VQ+
Sbjct: 267 KYNNLYLVSTTRKNANVALVFSFLHKLVQIL 359
>08361
Length = 465
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 108/147 (73%), Gaps = 2/147 (1%)
Frame = -3
Query: 81 FSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGH 140
F FL+K+ +V YF ++ EE+I++NFV+IYE+LDE++D+GYPQ TD+ IL+ +ITQ+G
Sbjct: 463 FEFLHKIAEVMQAYFGKISEENIKNNFVLIYEILDEILDYGYPQNTDTGILKTFITQQGI 284
Query: 141 KLETGAPRPPAT--VTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSI 198
K ++ T VT + WR EGIKYR+NE+FLDV+E+VNLL+S G VL + + G I
Sbjct: 283 KSQSKEDTAQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVAGRI 104
Query: 199 KMRVFLSGMPELRLGLNDKVLFDNTGR 225
M+ +LSGMPE + G+NDKVL D G+
Sbjct: 103 VMKSYLSGMPECKFGINDKVLMDTKGK 23
>06056
Length = 1228
Score = 68.6 bits (166), Expect(2) = 2e-20, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%)
Frame = -2
Query: 257 PPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMVKAKSQFKRRSTANNVEIHIPV 316
PPDGEFELM YR + + ++ + ++E V KS FK A VE+ IP
Sbjct: 1104 PPDGEFELMRYRTTNDISLPFRVIPLVREVGRQKMEVKVVVKSNFKPSLAAQKVELRIPT 925
Query: 317 PNDADSPKFKTTVGSVKWVPENSEIVWSVKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPI 376
P + + G K+ ++ IVW +K G KE + A L + + K +PP+
Sbjct: 924 PLNTSGVQVICMKGXAKYKASDNAIVWKIKRIGGMKECQLSAEIELLATSDKKKWTRPPL 745
Query: 377 SVKFEIPYFTTS 388
S +P F +S
Sbjct: 744 S----MPVFLSS 721
Score = 48.5 bits (114), Expect(2) = 2e-20, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -3
Query: 222 NTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDG 260
G GK+ S+ ++D +FHQCV+LS+FE + +ISFIP G
Sbjct: 1205 GAGAGKT-SIAIDDCQFHQCVKLSKFETEHSISFIPLXG 1092
>30493
Length = 657
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Frame = -2
Query: 288 HSRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSVKS 347
++E V KS FK A VE+ IP P + + G K+ ++ IVW +K
Sbjct: 569 RQKMEVKVVVKSNFKPSLAAQKVELRIPTPLNTSGVQVICMKGRAKYKASDNAIVWKIKR 390
Query: 348 FPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEK----SGY 403
G KE + A L + + K +PP+S+ FE+P F SG +VRYLK+ E S +
Sbjct: 389 IGGMKECQLSAEIELLATSDKKKWTRPPLSMNFEVP-FAPSGFKVRYLKVFESKINYSDH 213
Query: 404 QALPWVRYITQNGDYQLRT 422
+ WVRYI ++G Y+ R
Sbjct: 212 DVIKWVRYIGRSGLYETRC 156
>29016
Length = 550
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +2
Query: 223 TGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMS 266
G GK+ S+ ++D +FHQCV+LS+FE + +ISFIPPDGEFELMS
Sbjct: 2 AGAGKT-SIAIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMS 130
>28998
Length = 569
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +2
Query: 223 TGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELM 265
G GK+ S+ ++D +FHQCV+LS+FE + +ISFIPPDGEFELM
Sbjct: 2 AGAGKT-SIAIDDCQFHQCVKLSKFETEHSISFIPPDGEFELM 127
>33122
Length = 465
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = -3
Query: 231 VELEDVKFHQCVRLSRFENDRTISFIPPDG-EFELMSYRL----NTHVKPLIWIESVI-E 284
+++ED +FH V L +EN + F P D +FEL+ +R+ N + + ++ ++ +
Sbjct: 436 IKIEDPEFHCVVDLDTYENTNNLRFHPLDACQFELLRFRVRPRENKELPLQLHVQQIMKD 257
Query: 285 KHSHSRIEYMVKAKSQFKRRS---TANNVEIHIPVP 317
+H R + +V F ++ ++EIH +P
Sbjct: 256 RHFEIRCBMLVTGYHAFSKKCGQFPCEDIEIHFKIP 149
>04375
Length = 2667
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 13/109 (11%)
Frame = +3
Query: 55 VRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELL 114
++ ++ ++ +LY + L +++ V++ +YF + E I NF + +L
Sbjct: 264 LKVVYKRYASLYFCCAIEPEDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAFFML 443
Query: 115 DELMDFGYPQTTDSK----------ILQEYITQEGHKLETGA---PRPP 150
DE M G Q T K +LQE T +G + G P PP
Sbjct: 444 DEFMLGGEVQETSKKNVLKAIAAQDLLQEEETPQGFFEDHGLG*HPSPP 590
>36011
Length = 343
Score = 28.5 bits (62), Expect = 5.0, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -1
Query: 270 NTHVKPLIWIESVIEKHSHSRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTV 329
N H K + ++V++ H HS +++ + + + P+PN SPK+K V
Sbjct: 268 NNH*KAIFNFDAVLKHHFHSNSKFV-----------NSCSRSLQTPLPNXPPSPKYKQQV 122
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6671702|ref|NP_031663.1| chaperonin containing Tcp1,
subunit 5 (epsilon) [Mus musculus]
(541 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01159 828 0.0
12796 197 1e-50
05356 104 1e-45
29631 92 3e-45
06409 174 6e-44
02673 158 7e-39
09900 115 5e-26
29864 106 2e-23
33770 94 2e-19
30661 85 8e-17
10291 67 2e-11
17249 45 6e-05
09856 30 1.7
29327 30 1.8
21277 28 9.8
>01159
Length = 2613
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/539 (73%), Positives = 468/539 (86%), Gaps = 1/539 (0%)
Frame = +3
Query: 1 MAS-VGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDK 59
MAS +G +AFDEYGRPF+I++DQD+KSRL G+EA KSHI+AAK+VA+ ++TSLGP GLDK
Sbjct: 90 MASPMGQIAFDEYGRPFIILRDQDKKSRLTGIEAHKSHILAAKSVASILKTSLGPKGLDK 269
Query: 60 MMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDXXXXXXXXXXXXXXX 119
MMV DGDVT+TNDGATIL MMDVDHQIAKLMV+LSKSQDDEIGD
Sbjct: 270 MMVSGDGDVTVTNDGATILDMMDVDHQIAKLMVQLSKSQDDEIGDGTTGVVVLAGALLEQ 449
Query: 120 XXQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLVDINNPEPLIQTAKTTLGSKVIN 179
+LLDRGIHPIRIADGYE AA+ A++ LDKISD VD+ N EPLI+ A TTLGSK++N
Sbjct: 450 AEKLLDRGIHPIRIADGYEIAAKCAVETLDKISDNYEVDLKNAEPLIKLAMTTLGSKIVN 629
Query: 180 SCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQM 239
CHRQMA+IAV+A+++VAD++R+DVDFELIKVEGKVGG+LEDT L+KGV+VDKD SHPQM
Sbjct: 630 RCHRQMAKIAVDAIMSVADLKRKDVDFELIKVEGKVGGKLEDTMLVKGVVVDKDMSHPQM 809
Query: 240 PKKVVDAKIAILTCPFEPPKPKTKHKLDVMSVEDYKALQKYEKEKFEEMIKQIKETGANL 299
PK V DAKIAILTCPFEPPKPKTKHKLD+ SVEDYK L++YE KFE M++ +K+ GANL
Sbjct: 810 PKVVKDAKIAILTCPFEPPKPKTKHKLDITSVEDYKKLREYELNKFESMVQSVKDKGANL 989
Query: 300 AICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVV 359
ICQWGFDDEANHLLLQ LPAVRWVGGPEIELIAIATGGRIVPRF ELT+EKLG AG+V
Sbjct: 990 VICQWGFDDEANHLLLQRELPAVRWVGGPEIELIAIATGGRIVPRFEELTTEKLGKAGIV 1169
Query: 360 QEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 419
+E++FGTTKD+MLVIE+C N+RAVTIFIRGGNKMI+EEAKRSLHDALCVIRNL+RDNRVV
Sbjct: 1170RELTFGTTKDRMLVIEECLNTRAVTIFIRGGNKMIVEEAKRSLHDALCVIRNLVRDNRVV 1349
Query: 420 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRA 479
YGGGA EI+ ++AV++ ADK TLEQYA+R+F++ALE +P+AL+ENSG+ PIQT+ EV++
Sbjct: 1350YGGGAPEIAASVAVAEAADKISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKS 1529
Query: 480 RQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
RQVKE NP LGIDCL KG+NDM+ Q+VIETL KKQQI LATQ+VRMILKIDDIR P +
Sbjct: 1530RQVKEKNPRLGIDCLLKGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDIRAPSD 1706
>12796
Length = 1316
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 188/339 (55%), Gaps = 9/339 (2%)
Frame = -3
Query: 204 VDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVVDAKIAILTCPFEPPKPKTK 263
VD + IKV +GG +EDT+L+ G++ + PK++ AKI ++ PK
Sbjct: 1308 VDLKNIKVIRSLGGTVEDTELVNGLVFTSRSAGTNAPKRIEKAKIGLIQFCISAPKTDMD 1129
Query: 264 HKLDVMSVEDYKALQKYEKEK---FEEMIKQIKETGANLAICQWGF-----DDEANHLLL 315
H + V DY A+ + KE+ ++KQIK+ G N+ + Q D A H L
Sbjct: 1128 HN---VIVSDYAAMDRVLKEERSYILNIVKQIKKAGCNVLLVQKSILRDAVSDLAQHFLD 958
Query: 316 QNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQEISFGTTKDKMLVIE 375
+ V+ V +IE + R + T+E + A +V+E++ GT +K + I
Sbjct: 957 KIKCLVVKDVEREDIEFVCKTLHCRPIASLDHFTAENMSSADLVEEVASGT--NKFVKIT 784
Query: 376 KCKN-SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVS 434
+N R V+I RG NK+++EEA RSLHDALCV+R L+R+ + GGGA EI AL ++
Sbjct: 783 GIQNQGRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVRNRAQIVGGGAPEIEMALQLA 604
Query: 435 QEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCL 494
A ++ Y RAFADALEVIP L+EN+G+NPI T+TE+R R + A GI+
Sbjct: 603 AAAQTVDGVDAYCYRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNA-GINVR 427
Query: 495 HKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDI 533
D+ ++V++ L+ I+LAT+ VR ILKIDDI
Sbjct: 426 KGAITDIFAENVVQPLLVSTSAITLATETVRSILKIDDI 310
>05356
Length = 2339
Score = 104 bits (259), Expect(2) = 1e-45, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 143/283 (50%), Gaps = 3/283 (1%)
Frame = +2
Query: 22 QDRKSRLMGL-EALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSM 80
+D GL EA+ +I A K +A T R++ GP+G +KM+++ + +TND ATIL
Sbjct: 236 KDGAKHFSGLDEAVYRNIEACKELAKTTRSAYGPHGQNKMVINHLEKLFVTNDAATILRE 415
Query: 81 MDVDHQIAKLMVELSKSQDDEIGDXXXXXXXXXXXXXXXXXQLLDRGIHPIRIADGYEQA 140
++V H AK++V + Q+ E GD QLL G+ + +GYE A
Sbjct: 416 LEVQHPAAKMLVLAAHQQEQECGDGTNFVLVFAGALLENAEQLLRMGLSVTEVIEGYELA 595
Query: 141 ARIAIQHLDKISDKVLVDINNPEPLIQTAKTTLGSKVINSCHRQMAEIAVNAVLTVADME 200
+ A + L K+ + ++ N E + +T++ SK + +A++ +A ++V +
Sbjct: 596 LKKAHEILPKLVIGHVKNLRNKEEVKTAIRTSVMSKQYGN-EDFLADLITDACVSVLPAK 772
Query: 201 RRDVDFEL--IKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVVDAKIAILTCPFEPP 258
+ F + ++V +G L + I+G++ + KV AK+A+ TCP +
Sbjct: 773 ---ISFSVDNVRVCKILGCGLLQSSTIQGMVFKRQVEGE--ITKVEKAKVAVFTCPLDSM 937
Query: 259 KPKTKHKLDVMSVEDYKALQKYEKEKFEEMIKQIKETGANLAI 301
+ +TK + + + E+ + K E++ EE IK IKE G N+ +
Sbjct: 938 QTETKGTVLIKNAEELMSFSKGEEDMMEEQIKGIKEAGVNVIV 1066
Score = 97.8 bits (242), Expect(2) = 1e-45, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 120/235 (51%), Gaps = 3/235 (1%)
Frame = +1
Query: 302 CQWG-FDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQ 360
C WG D A H + + +R + ++ + + +P+ + +E+ G+ +V
Sbjct: 1063 CSWGEVGDLAQHYCNKYKVMVIRLLSKWDLRRLCKSICATALPKVTTPRNEECGYCDLVY 1242
Query: 361 EISFGTTKDKMLVIEKCKNSRAVT-IFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 419
G T +++ ++ K+ +T + IRG I+++ +R+L D + + L +D+R+V
Sbjct: 1243 VDEIGETP--VVIFQQNKDESPITTVIIRGSTDNIMDDIERALDDGVNTFKALTKDDRLV 1416
Query: 420 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRA 479
G GA EI A ++ + P LEQYA++ FA++LEVIP AL+EN+GM ++++ A
Sbjct: 1417 PGAGATEIELAKQITTYGESLPGLEQYAVKKFAESLEVIPRALAENTGMKATDILSKLYA 1596
Query: 480 RQVKESNPALGIDCLHKGSN-DMQYQHVIETLIGKKQQISLATQMVRMILKIDDI 533
+E G+D GS D + ++ + + + + A +L++D I
Sbjct: 1597 AH-QEGQQNAGVDIDDSGSVLDAKQANLTDLYLNRYWGLKFAAAAACTVLRVDQI 1758
>29631
Length = 1257
Score = 91.7 bits (226), Expect(3) = 3e-45, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Frame = +1
Query: 168 TAKTTLGSKVINSCHRQMAEIAVNAVLTVADME--RRDVDFE-LIKVEGKVGGRLEDTKL 224
++++ LG+K I+ +IA++A TV E R+++D + KVE GG +E++++
Sbjct: 451 SSQSCLGTKFISKWMDLACQIALDATTTVFMEENGRKEIDIKRYAKVEKIPGGTMEESEV 630
Query: 225 IKGVIVDKDFSHPQMPKKVVDAKIAILTCPFEPPKPKTKHKLDVMSVEDYKALQKYEKEK 284
+KG+ V+KD H +M +++ + +I +L C E K ++ +++ ED+ + + E+E
Sbjct: 631 LKGIXVNKDVVHXKMKRRIENPRIMLLDCNLEYKKGESATNIEISKEEDFAKILQLEEEY 810
Query: 285 FEEMIKQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPR 344
+M +I +L I + G D A H LL+ G+ +R V + IA A G I R
Sbjct: 811 IRKMCDEIIALKPDLVITEKGVSDLAQHFLLKAGISVLRRVRKTDNNRIARACGATIANR 990
Query: 345 FSELTSEKLG 354
EL E +G
Sbjct: 991 TDELKEEDMG 1020
Score = 76.6 bits (187), Expect(3) = 3e-45, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%)
Frame = +3
Query: 17 LIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGAT 76
+I+ +Q+ + R G + +I A K +A+ +RT LGP + KM++D G + +TNDG
Sbjct: 3 IIVLNQNTR-RESGRKVQLGNIAAGKTIADVIRTCLGPKSMLKMLMDPMGGIVMTNDGNA 179
Query: 77 ILSMMDVDHQIAKLMVELSKSQDDEIGDXXXXXXXXXXXXXXXXXQLLDRGIHPIRIADG 136
IL ++V H AK M+E++++QD+E GD Q L++ +HP I
Sbjct: 180 ILREINVQHPAAKSMIEVARTQDEETGDGTKSVIILAGEVLSVAEQFLEQQMHPTVIIAA 359
Query: 137 YEQA 140
Y QA
Sbjct: 360 YRQA 371
Score = 53.5 bits (127), Expect(3) = 3e-45, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Frame = +3
Query: 369 DKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEIS 428
D + CK+ +A TI +RG +K I+ E +R+L DA+ V RN++ D + GGGA+E++
Sbjct: 1059 DYFTFLVDCKSPKACTILLRGASKDILAEVERNLQDAMNVARNVMIDPHLCPGGGASEMA 1238
Query: 429 CALAVS 434
A A++
Sbjct: 1239 LAQALN 1256
>06409
Length = 1533
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 165/303 (54%), Gaps = 9/303 (2%)
Frame = -3
Query: 240 PKKVVDAKIAILTCPFEPPKPKTKHKLDVMSVEDYKALQKYEKEKFEEMIKQIKETGANL 299
P KV AKI + PPK ++++ V + + E+ +++K+IK+ G N+
Sbjct: 1501 PSKVEKAKIGFIQFCISPPKTDMENQVIVSDYTQMDRVLREERNYILDIVKKIKKAGCNV 1322
Query: 300 AICQWGF-----DDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLG 354
+ Q D A H L + + V+ + ++E + G R V E LG
Sbjct: 1321 LLIQKSILRDAVSDLALHFLAKMKIMVVKDIEREDVEFVCKTLGCRPVASLDHFLPENLG 1142
Query: 355 FAGVVQEISFGTTKDKMLVIEKCKN----SRAVTIFIRGGNKMIIEEAKRSLHDALCVIR 410
A +++E+ G++K I K + VT+ IRG NK+++EEA RSLHDALCVIR
Sbjct: 1141 SADLIEEVQTGSSK-----IVKATGIANPGQTVTVLIRGSNKLVLEEADRSLHDALCVIR 977
Query: 411 NLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNP 470
L++ ++ GGGA E ++ ++ A+ +EQY RAFA+ALEVIP L+EN+G+NP
Sbjct: 976 CLVKKKALIAGGGAPETEMSMRLAAYANTLAGMEQYCFRAFAEALEVIPFTLAENAGLNP 797
Query: 471 IQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKI 530
I T+T +R R + A GI+ ++ ++V++ L+ I+LA++ VR ILKI
Sbjct: 796 ISTVTXLRTRHAQGERTA-GINVRKGAITNILEENVLQPLLVSTSAITLASETVRSILKI 620
Query: 531 DDI 533
DDI
Sbjct: 619 DDI 611
>02673
Length = 1243
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/116 (67%), Positives = 99/116 (85%)
Frame = +1
Query: 423 GAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQV 482
GA EI+ ++AV++ ADK TLEQYA+R+F++ALE +P+AL+ENSG+ PIQT+ EV++RQV
Sbjct: 1 GAPEIAASVAVAEAADKISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKSRQV 180
Query: 483 KESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
KE NP LGIDCL KG+NDM+ Q+VIETL KKQQI LATQ+VRMILKIDDIR P +
Sbjct: 181 KEKNPRLGIDCLLKGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDIRAPSD 348
>09900
Length = 1305
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 141/291 (48%), Gaps = 1/291 (0%)
Frame = +3
Query: 247 KIAILTCPFEPPKPKTKHKLDVMSVEDYKALQKYEKEKFEEMIKQIKETGANLAICQWGF 306
+IA+L E + ++ V +V++Y+++ E + + + +I ++GA + + +
Sbjct: 60 RIALLNIELELKSERDNAEVRVDNVQEYQSIVDAEWKILYDKLDKIHQSGAKVVLSKLPI 239
Query: 307 DDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQEISFGT 366
D A + V ++ A GG I LT + LG + EI G
Sbjct: 240 GDVATQYFADRDMFCAGRVPEEDLRRTMKACGGSIQTTVQSLTPDVLGTCQLFDEIQIGG 419
Query: 367 TKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAE 426
+ M + C +R TI +RGG + +EE +RSLHDA+ ++R I+++ VV GGGA E
Sbjct: 420 ERFNMF--KGCTMARTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIE 593
Query: 427 ISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESN 486
+ + + + + EQ M A+A ALEVIP L +N+G + + ++R + +
Sbjct: 594 MEVSYHLREHSHTIAGKEQLLMSAYAKALEVIPRQLCDNAGFDATNILNKLRQKHA-QGG 770
Query: 487 PALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDD-IRKP 536
G++ L + D V E + K ++ A++ +IL +D+ I+ P
Sbjct: 771 TWYGVNILREDIADNFEDCVWEPAVVKINALTAASEATALILSVDETIKNP 923
>29864
Length = 1026
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 123/251 (49%)
Frame = +1
Query: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLM 91
+AL +I AAK + + +R++LGP G KM+V GD+ +T DG +L M + H A L+
Sbjct: 160 QALAVNIAAAKGLQDVLRSNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLI 339
Query: 92 VELSKSQDDEIGDXXXXXXXXXXXXXXXXXQLLDRGIHPIRIADGYEQAARIAIQHLDKI 151
++ +QDD GD + G+HP I +G+E A A++ L+++
Sbjct: 340 ARVATAQDDITGDGTTSNVLIIGELLKQADLYIAEGLHPRLITEGFELARNKALEVLEEV 519
Query: 152 SDKVLVDINNPEPLIQTAKTTLGSKVINSCHRQMAEIAVNAVLTVADMERRDVDFELIKV 211
K VD E L+Q A+T+L +KV + E V+AVL + +D ++++
Sbjct: 520 KVKREVD---RETLVQVARTSLRTKVHTELADLLTEHVVDAVLAI-QXPGEGIDLHMVEL 687
Query: 212 EGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVVDAKIAILTCPFEPPKPKTKHKLDVMSV 271
D+ L++G+++D HP M K DA ILTC KT +V S
Sbjct: 688 MEMQHKTDLDSTLVRGLVMDHGARHPDMKKHTKDA--FILTCNVSLEYEKT----EVNSG 849
Query: 272 EDYKALQKYEK 282
YK Q+ EK
Sbjct: 850 FFYKTAQEREK 882
>33770
Length = 484
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Frame = +1
Query: 59 KMMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDXXXXXXXXXXXXXX 118
KM+ +GDVTITNDGATIL M V H AK++VELSK+QD E GD
Sbjct: 1 KMIQAANGDVTITNDGATILKQMQVLHPAAKMLVELSKAQDIEXGDGTTTVVVLAGSLLD 180
Query: 119 XXXQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLVDINNPEPLIQTAKTTLGSKVI 178
+LL +GIHP I++ +++AA ++ LD + +++++ E L+ +A T+L SKV+
Sbjct: 181 ASAKLLAKGIHPTMISEAFQKAASKCVELLDGMVKP--LELSDRESLLSSASTSLNSKVV 354
Query: 179 NSCHRQMAEIAVNAVLTVAD-MERRDVDFELIKVEGKVGGRLE 220
+ +A IAV+AVL V D +VD + IK+ K+GG ++
Sbjct: 355 SQYSSMLAPIAVDAVLKVIDPATATNVDLKDIKIIKKLGGTID 483
>30661
Length = 380
Score = 84.7 bits (208), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/114 (41%), Positives = 64/114 (56%)
Frame = +3
Query: 338 GGRIVPRFSELTSEKLGFAGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEE 397
GG I F KLG +++E+ G +DK++ A TI +RG + I++E
Sbjct: 30 GGEITSTFDCPEKTKLGQCDLIEEVMIG--EDKLIKFSGVALGEACTIVLRGATQQILDE 203
Query: 398 AKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAF 451
A RSLHDALCV+ +++ R VYGGG +E+ A AVSQ A K P E AM A
Sbjct: 204 AXRSLHDALCVLSQTVKETRTVYGGGCSEMLMAEAVSQLAAKTPGKEAIAMEAL 365
>10291
Length = 1066
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = +1
Query: 490 GIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
G+ C +G+NDM+ Q+VIETL KKQQI LATQ+VRMILKIDDIR P +
Sbjct: 13 GVGC--RGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDIRAPSD 153
>17249
Length = 909
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = +3
Query: 454 ALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGK 513
ALEVI L +N G N I+T+T +RA+ + GID DM + E L K
Sbjct: 12 ALEVISRTLIQNCGANTIRTLTALRAKHAQGQKNTWGIDGNTGNIVDMAEFGIWEPLSVK 191
Query: 514 KQQISLATQMVRMILKIDDI 533
Q A + ++L+IDDI
Sbjct: 192 LQVYKTACETAILLLRIDDI 251
>09856
Length = 1154
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 242 KVVDAKIAILTCPFEPPKPKTKHKLDVMSVEDYKALQK--YEKEK 284
KV+D+ I I TC F P + H + + +DY L YEK K
Sbjct: 163 KVMDSFIVIKTCMFFPLQH*NDHNYQLNTTQDYNFLGNITYEKTK 29
>29327
Length = 2425
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 494 LHKGS-NDMQYQHVIETLIGKKQQISLATQMVRMILKIDDI 533
L +G+ ++ ++V++ L+ I+LA++ VR ILKIDDI
Sbjct: 157 LFQGAITNILEENVLQPLLVSTSAITLASETVRSILKIDDI 279
>21277
Length = 1201
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +1
Query: 289 IKQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIAIA 336
K + G +A+C WG +H PA+ W P + A A
Sbjct: 943 WKCTRWNGEEVAVCSWGSGRAGDHRDHGRARPALMWPSTPSVRTWAGA 1086
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6678359|ref|NP_033414.1| transketolase [Mus musculus]
(623 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12789 823 0.0
26410 48 1e-05
33855 37 0.018
34622 29 7.1
>12789
Length = 2095
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/625 (62%), Positives = 482/625 (77%), Gaps = 5/625 (0%)
Frame = +3
Query: 2 EGYHKPDQQKLQALKDTANRLRISSIQATTAAGSGHPTSCCSAAEIMAVLFFHTMRYKAL 61
+ YH D +KLQAL+D AN+LRI SI++T+A+ SGHPTSC SAAEIM+VLFFHTM+Y
Sbjct: 75 DNYHCLDAKKLQALRDIANKLRIHSIESTSASNSGHPTSCSSAAEIMSVLFFHTMKYSIE 254
Query: 62 DPRNPHNDRFVLSKGHAAPILYAVWAEAGFLPEAELLNLRKISSDLDGHPVPKQAFTDVA 121
+PR P NDRFVLSKGHAAPILYA WAEAG P A+L NLRKI SDL+GHP P+ F DVA
Sbjct: 255 EPRGPSNDRFVLSKGHAAPILYAAWAEAGLFPTADLKNLRKIDSDLEGHPTPRLNFVDVA 434
Query: 122 TGSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAI 181
TGSLGQGL A GMAYTGKYFDKA YRVYC++GDGE +EGSVWEAMAFA YKLDNLV +
Sbjct: 435 TGSLGQGLSCAAGMAYTGKYFDKAGYRVYCIIGDGESAEGSVWEAMAFASEYKLDNLVVV 614
Query: 182 FDINRLGQSDPAPLQHQVDIYQKRCEAFGWHTIIVDGHSVEELCKAF---GQAKHQPTAI 238
FD+NRLGQS L H +D+Y+ R EAFGW+T +VDGH VE L + F Q K++PT +
Sbjct: 615 FDVNRLGQSQATSLGHSMDVYKARAEAFGWNTYVVDGHDVEGLSRVFYDASQVKNKPTCV 794
Query: 239 IAKTFKGRGITGIEDKEAWHGKPLPKNMAEQIIQEIYSQVQSKKKILATPPQED--APSV 296
+AKTFKG I GI D++ WHGK L + A+ ++ + Q+ +K TPP D AP +
Sbjct: 795 LAKTFKGNAIQGISDQDNWHGKAL-GDRADDAVKALTDQLANKGHHGITPPVPDSKAPVI 971
Query: 297 DIANIRMPTPPSYKVGDKIATRKAYGLALAKLGHASDRIIALDGDTKNSTFSELFKKEHP 356
+ NI + P+Y +G +ATR AYG AL K+G +DR+I+LDGD KNSTF+ FK+ +P
Sbjct: 972 NTTNITLSEXPAYTMGQLVATRAAYGTALVKVGKTNDRVISLDGDVKNSTFASKFKEAYP 1151
Query: 357 DRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAFDQIRMAAISESNINLCGSH 416
DRF+EC+IAEQN+V +A+GC TR RTVPF STFAAF +RAFDQIRMAAIS+SN+N CGSH
Sbjct: 1152DRFVECFIAEQNLVGVAIGCETRRRTVPFVSTFAAFLSRAFDQIRMAAISQSNVNFCGSH 1331
Query: 417 CGVSIGEDGPSQMALEDLAMFRSVPMSTVFYPSDGVATEKAVELAANTKGICFIRTSRPE 476
G+SIGEDGPSQMALED+AMFRS+P TVFYPSD V+TE+AVELAANT+G+CFIRTSRP
Sbjct: 1332AGISIGEDGPSQMALEDIAMFRSIPDCTVFYPSDAVSTERAVELAANTRGMCFIRTSRPN 1511
Query: 477 NAIIYSNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAESLKKDKISIRVLDPFT 536
+IY +E F VG+AKVV +S DQVTVIGA VTL EA+ AA+ L ++IR++DPFT
Sbjct: 1512VPVIYQPSETFTVGKAKVVRQSASDQVTVIGACVTLAEAMKAADELAGSGVNIRIIDPFT 1691
Query: 537 IKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSAAVVGEPGVTVTRLAVSQVPRSG 596
IKPLD I+ +ARAT GRI+TVEDHY EGGIGEAV +AV +TV RLAV ++PRSG
Sbjct: 1692IKPLDADTIISNARATSGRIITVEDHYMEGGIGEAVCSAVSECKDITVRRLAVKEIPRSG 1871
Query: 597 KPAELLKMFGIDKDAIVQAVKGLVT 621
K ELL+ +GI IV+AV+ +++
Sbjct: 1872KCGELLERYGISAACIVKAVQQVLS 1946
>26410
Length = 1216
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 105/276 (38%), Gaps = 22/276 (7%)
Frame = +1
Query: 350 LFKKEHPDRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFT-RAFDQIRMAAISES 408
L+KK R I+ I E IAVG A P C F+ +A DQ+ +A
Sbjct: 1 LWKKYGDKRVIDTPITEMGFAGIAVGAAMAGLK-PICEFMTFNFSMQAIDQVINSA--AK 171
Query: 409 NINLCGSHCGVSIGEDGPSQMALEDLA--------MFRSVPMSTVFYPSDGVATEKAVEL 460
+ V I GP+ AL A + S P V P ++
Sbjct: 172 TFYMSAGQVPVPIVFRGPNGAALGVAAQHSQCFAAWYSSCPGLKVLSPYSSEDCRGLLKA 351
Query: 461 AANTKGICFIRTSRP----ENAIIYSN---------NEDFQVGQAKVVLKSKDDQVTVIG 507
A IR P EN I+Y + DF K ++ + VT++
Sbjct: 352 A--------IRDPNPVVVLENEIMYGTAFDVSDEALSPDFVAPIGKAKIEREGSHVTLVA 507
Query: 508 AGVTLHEALAAAESLKKDKISIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGG 567
+ + + AA+ L + +++ +++P+D + I+ S T ++TVE + + G
Sbjct: 508 HSIGVGRCVEAAKELAGQGVECEIVNLRSLRPMDDETIIKSVMKTN-HLVTVEGGWPQCG 684
Query: 568 IGEAVSAAVVGEPGVTVTRLAVSQVPRSGKPAELLK 603
IG ++A ++ P V +V + P K
Sbjct: 685 IGSEITARIMESPAFNYLDAPVYRVTGADVPMPYTK 792
>33855
Length = 600
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +1
Query: 149 VYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIFDINR-LGQSDPAPLQHQVDIYQKRCE 207
V C GDG SEG A+ FA + LD + F N S P Q++ D R
Sbjct: 229 VICYFGDGAASEGDAHAALNFAAV--LDCPIIFFCRNNGYAISTPTKDQYRGDGIAARGP 402
Query: 208 AFGWHTIIVDGH---SVEELCKAFGQ---AKHQPTAIIAKTFK 244
+G TI VDG+ +V KA Q ++++P I A T++
Sbjct: 403 GYGISTIRVDGNDPFAVYNATKAGRQICLSQNRPVLIEAMTYR 531
>34622
Length = 477
Score = 28.9 bits (63), Expect = 7.1, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 103 ISSDLDGHPVPKQAFTDVATGSLGQGLGAAC 133
I D+DGHPV Q+ DV L GL C
Sbjct: 206 IGHDVDGHPVTLQSLKDVEVHGLVVGLRRDC 298
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6678467|ref|NP_033473.1| tubulin, alpha 4 [Mus
musculus]
(448 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00276 688 0.0
12457 449 e-131
06360 330 6e-91
03702 278 3e-75
17215 254 7e-68
16482 213 1e-55
13181 187 5e-48
04882 176 2e-44
05902 137 7e-33
25015 114 1e-25
39157 91 6e-19
28905 91 8e-19
31457 88 6e-18
13964 33 0.17
26569 32 0.55
06591 30 2.7
18555 28 6.1
>00276
Length = 1330
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/360 (91%), Positives = 338/360 (93%)
Frame = -3
Query: 80 NGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFH 139
G YRQL PEQL+TGKEDAANNYARGHYTIGKE++D VLDRIRKL+DQCTGLQGFL+FH
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 140 XXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSD 199
L MERLSVDYGKKSKLEF IYPAPQVSTAVVEPYNSILTTHTTLEHSD
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 200 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNL 259
CAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQTNL
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 260 VPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLY 319
VPYPRIHFPLATYAPVISAEKAYHEQL VAEITNACFEPANQ+VKCDPRHGKYMACC+LY
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 320 RGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
RGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGIDS 439
NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG+DS
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 252
>12457
Length = 781
Score = 449 bits (1155), Expect(2) = e-131, Method: Compositional matrix adjust.
Identities = 214/239 (89%), Positives = 222/239 (92%)
Frame = -1
Query: 67 FVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLS 126
VDLEPTV+DE+R G YRQLFHPEQL+TGKEDAANNYARGHYTIGKEI+D VLDRIRKL+
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 127 DQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 186
DQCTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 187 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDG 246
SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDG
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 247 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKC 305
ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVKC
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKC 2
Score = 37.4 bits (85), Expect(2) = e-131, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = -2
Query: 45 GDDSFTTFFCETGAGKHVPRAVFVDLEP 72
GDDSFT ETGAGKHVPRAV P
Sbjct: 780 GDDSFTPL-SETGAGKHVPRAVSSXXSP 700
>06360
Length = 1896
Score = 330 bits (847), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 154/178 (86%), Positives = 161/178 (90%)
Frame = -1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF TFF ETGAGK
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 61 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120
HVPRAVFVDLEPTV+DE+R G YRQLFHPEQL+TGKEDAANNYARGHYTIGKEI+D VLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 121 RIRKLSDQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVS 178
RIRKL+DQCTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVS
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVS 1177
>03702
Length = 1932
Score = 278 bits (711), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/155 (89%), Positives = 142/155 (91%)
Frame = +1
Query: 153 LMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 212
L ERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI
Sbjct: 1453 L*ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 1632
Query: 213 CRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATY 272
CRRNLDIERP YTNLNRLI QIVSSITASLRFDGALNVDLTEFQTNLVP P P
Sbjct: 1633 CRRNLDIERPXYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTPH-PLPPGHL 1809
Query: 273 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 307
PVISAEKAYHEQL+VAE+TNACFEPANQ+VKCDP
Sbjct: 1810 CPVISAEKAYHEQLTVAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 254 bits (648), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 118/123 (95%), Positives = 122/123 (99%)
Frame = +3
Query: 317 LLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 376
+LYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC
Sbjct: 3 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 182
Query: 377 MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVG 436
MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG
Sbjct: 183 MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 362
Query: 437 IDS 439
+DS
Sbjct: 363 VDS 371
>16482
Length = 837
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 149/248 (60%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60
MRE + + GQ G Q+G WE+ EHGI P G D + + ++ E GK
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 273
Query: 61 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120
+VPRAV VDLEP +D +R+GP+ Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 274 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 453
Query: 121 RIRKLSDQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
+RK ++ C LQGF + H LL+ ++ +Y + FS+ P+P+VS
Sbjct: 454 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 633
Query: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+S +S +T
Sbjct: 634 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 813
Query: 241 SLRFDGAL 248
LRF G L
Sbjct: 814 CLRFPGQL 837
>13181
Length = 1092
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 131/225 (58%)
Frame = -3
Query: 210 YDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
YDIC R L + PTY +LN L+S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 270 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 329
+AP+ S + L+V E+T F+ N M CDPRHG+Y+ ++RG + K+V+
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 330 AAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 389
+ ++ K S FV+W P K + PP ++ + + N+TAI E +
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFVGNSTAIQELFK 575
Query: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 574 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 440
>04882
Length = 1136
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 125/216 (57%)
Frame = +2
Query: 219 IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISA 278
+ PTY +LN L+S +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 314 VHTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 493
Query: 279 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTK 338
+ L+V E+T F+ N M CDPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 494 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNK 673
Query: 339 RSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 398
S FV+W P K + PP ++ + + N+TAI E + R+ +F M
Sbjct: 674 NSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIGNSTAIQELFKRISEQFTAM 829
Query: 399 YAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 830 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 937
>05902
Length = 1127
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 160/290 (55%), Gaps = 9/290 (3%)
Frame = +2
Query: 153 LMERLSVDYGKKSKLEFSIYP-APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
L+E+L+ + KK +S++P ++S VV+PYNS+LT +++DC ++DN A+
Sbjct: 65 LLEKLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNR 244
Query: 212 ICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT 271
I L I+ PT+ +N+L+S ++S+ T +LR+ G +N DL +L+P PR+HF +
Sbjct: 245 IAADRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTG 424
Query: 272 YAPVIS-AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGK----YMACCLLYRGDVVPK 326
Y P+ + ++ A + +V ++ +P N MV P H + Y++ + +G+V P
Sbjct: 425 YTPLTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPT 601
Query: 327 DVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 386
V+ ++ I+ ++ QF+ W P +V ++ + P V ++ + ML+N T+I+
Sbjct: 602 QVHKSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGL-----MLANHTSISH 766
Query: 387 AWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDMAALEKDYE 433
+ R+ ++D + + AF+ + E + + EF +RE + L +Y+
Sbjct: 767 LFERILRQYDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>25015
Length = 458
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 74/119 (62%)
Frame = -3
Query: 21 WELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRN 80
WE+ EHGI P G D + + ++ E GK+VPRAV VDLEP +D +R+
Sbjct: 360 WEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRS 187
Query: 81 GPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFH 139
GP+ Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++ C LQGF + H
Sbjct: 186 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 10
>39157
Length = 488
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60
MRE + + GQ G Q+G WE+ EHGI P G D + + ++ E GK
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 270
Query: 61 HVPRAVFVDLEPTVIDEIRNG-PYR-QLFHPEQLITGKEDAANNYARGHYTI-GKEIIDP 117
+VPRAV VDLEP +D +R+G P+ ++F P+ + G+ A NN+ + T G E++D
Sbjct: 269 YVPRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDS 90
Query: 118 VLDRIRK 124
VLD +RK
Sbjct: 89 VLDVVRK 69
>28905
Length = 425
Score = 91.3 bits (225), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 59/103 (57%)
Frame = -1
Query: 258 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCL 317
N+VP+PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y+
Sbjct: 380 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 201
Query: 318 LYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
++RG + K+V+ + ++ K S FV+W P K + PP
Sbjct: 200 MFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 72
>31457
Length = 1530
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 69/124 (55%)
Frame = +3
Query: 311 KYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 370
KY+ ++RG + K+V+ + ++ K S FV+W P K + PP
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------G 389
Query: 371 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L
Sbjct: 390 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 569
Query: 431 DYEE 434
+Y++
Sbjct: 570 EYQQ 581
>13964
Length = 528
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 424 DMAALEKDYEEVGIDS 439
D+AALEKDYEEVG+DS
Sbjct: 230 DLAALEKDYEEVGVDS 277
>26569
Length = 1180
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +1
Query: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
R V +N A +E W + KF A+ HW G+G E + S AR L D
Sbjct: 481 RGVNRPANYCAGSETWTQRKKKFSNWNAR----HWKRGKGKERRKISLARAGGVGLAVDT 648
Query: 433 EE 434
E
Sbjct: 649 SE 654
>06591
Length = 978
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -2
Query: 320 RGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 376
RG VP + T S DWCP G + G+ YQ T D+A Q +C
Sbjct: 767 RGSCVPSE---------TSLSTPVTDWCPQGDQPGVVYQNLTCA---DVATSQPWLC 633
>18555
Length = 596
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAE 279
+QI S S + AL +D F + + P+++FPL+ PV+SA
Sbjct: 344 NQIFS*S*KSFCYSLALTIDKKHFNKDRLLKPKVNFPLS*GQPVLSAS 201
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6681273|ref|NP_031932.1| eukaryotic translation
elongation factor 1 alpha 2 [Mus musculus]
(463 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
15991 568 0.0
00709 462 e-130
22349 143 1e-34
16686 75 4e-14
15617 51 1e-06
04430 28 0.032
31464 36 0.035
35135 35 0.056
14064 31 0.90
>15991
Length = 1629
Score = 568 bits (1464), Expect(3) = 0.0, Method: Compositional matrix adjust.
Identities = 276/336 (82%), Positives = 296/336 (88%)
Frame = -3
Query: 44 KEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMI 103
+EAAEMGKGSFKYAWVLDKLKAERERGITIDI+LWKFET KYY+TIIDAPGHRDFIKNMI
Sbjct: 1546 EEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETDKYYVTIIDAPGHRDFIKNMI 1367
Query: 104 TGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYS 163
TGTSQADCAVL+VAAG GEFEAGISK+GQTREHALLAYTLGVKQLIV VNKMDSTEP YS
Sbjct: 1366 TGTSQADCAVLVVAAGKGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDSTEPPYS 1187
Query: 164 EKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNA 223
R++EI KEVS YIKKIGYNP TV FVPISGW GDNM+E S + WK+ERKEG A
Sbjct: 1186 MDRFEEIKKEVSTYIKKIGYNPNTVAFVPISGWVGDNMMEASTKI--VHKWKIERKEGKA 1013
Query: 224 SGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPV 283
G +L EALD ILPPTRPTDK LRLPLQDVYKIGGIGTVPVGRVETGIL+PG VVTFAP
Sbjct: 1012 EGETLKEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVTFAPG 833
Query: 284 NITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQ 343
+TTEVKSVEMHHE L EALPGDNVGFNVKNVSVKDIRRGNV GDSK DPP+ A F +Q
Sbjct: 832 GLTTEVKSVEMHHEQLQEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPKGAKNFYAQ 653
Query: 344 VIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKI 379
VIILNHPG I AGY+PV+DCHTAHIACKF EL+ ++
Sbjct: 652 VIILNHPGMIHAGYAPVLDCHTAHIACKFEELEREV 545
Score = 125 bits (314), Expect(3) = 0.0, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 67/78 (85%)
Frame = -1
Query: 375 LKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVA 434
LKEK D RSGKKLEDNPK +KSGDAA+V +VP KPMCVE+F YPPLGRFAVRDM+QTVA
Sbjct: 558 LKEKCDXRSGKKLEDNPKCVKSGDAAMVTLVPSKPMCVEAFVDYPPLGRFAVRDMKQTVA 379
Query: 435 VGVIKNVEKKSGGAGKVT 452
VGVIK+VEK AGKVT
Sbjct: 378 VGVIKSVEKVE-AAGKVT 328
Score = 54.3 bits (129), Expect(3) = 0.0, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -2
Query: 17 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAE 48
DSGKSTTTGHLIYKCGGIDKR IEK + +
Sbjct: 1625 DSGKSTTTGHLIYKCGGIDKRVIEKLRRSCRD 1530
>00709
Length = 1076
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/261 (85%), Positives = 237/261 (90%), Gaps = 4/261 (1%)
Frame = -2
Query: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVL
Sbjct: 907 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 728
Query: 61 DKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV 120
DKLKAERERGITIDI+LWKFETTKYY+TIIDAPGHRDFIKNMITGTSQADCAVLIVA+G
Sbjct: 727 DKLKAERERGITIDIALWKFETTKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVASGT 548
Query: 121 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKK 180
GEFEAGISK GQTREHALLAYTLGVKQLI+GVNKMDST PAYSE R++EI KEVS YIKK
Sbjct: 547 GEFEAGISKEGQTREHALLAYTLGVKQLIIGVNKMDSTSPAYSETRFNEIQKEVSGYIKK 368
Query: 181 IGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGN----ASGVSLLEALDTIL 236
IG+NP V FVPISG+HGDNM+ S M W+KGW++ERKEG ASG +L +ALD+IL
Sbjct: 367 IGFNPKAVAFVPISGFHGDNMIXESEKMGWYKGWEIERKEGTKEVKASGKTLFDALDSIL 188
Query: 237 PPTRPTDKPLRLPLQDVYKIG 257
PPTRPT KPLRLPLQDVYKIG
Sbjct: 187 PPTRPTGKPLRLPLQDVYKIG 125
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = -3
Query: 237 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAP 282
PP P P + ++ GIGTVPVGRVETGIL+PGMVVTFAP
Sbjct: 186 PPLVPLASLCVCPCRMSTRLEGIGTVPVGRVETGILKPGMVVTFAP 49
>22349
Length = 662
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Frame = -2
Query: 5 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLK 64
K HIN+V IGHVD+GKST GHL+Y G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 499 KDHINVVFIGHVDAGKSTIGGHLLYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNN 320
Query: 65 AERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF- 123
ERE+G T+++ FET + T++DAPGH+ F+ NMI G SQAD A+L+++A GEF
Sbjct: 319 EEREKGKTVEVGRAFFETELKHFTVLDAPGHKSFVPNMICGASQADLAILVISARRGEF* 140
Query: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMD 156
+ +S+ + GV+ LIV +NKMD
Sbjct: 139 DWFLSEEARHVSMPCW*RRQGVRHLIVLINKMD 41
>16686
Length = 689
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 81/153 (52%)
Frame = -2
Query: 289 VKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILN 348
VK+V + + A GD+V F++ N+ + + G V D + P + A + ++V++ N
Sbjct: 649 VKNVTVDDLSSQLAFAGDHVTFSLTNIDMTSVNVGFVLCDPMS-PTKCAIRIRAKVVLFN 473
Query: 349 HPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGK 408
I+ G+ V + F L I++ +G +++ PK L +AIVE+ +
Sbjct: 472 LDLPITRGFPVVFHXQCVNEPAVFKRLVATINKSTGDIVKNRPKCLTKNSSAIVELEFER 293
Query: 409 PMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNV 441
+CVE +S+Y LGRF +R+ T+A G+I+ +
Sbjct: 292 SVCVELYSEYRDLGRFMLRNSGHTIAAGMIEEI 194
>15617
Length = 595
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 61/133 (45%), Gaps = 18/133 (13%)
Frame = -3
Query: 2 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLD 61
G++K N+ VI HVD GKST T L+ K G I +A+ G+ F D
Sbjct: 449 GQQKNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------ASAKAGETRFT-----D 315
Query: 62 KLKAERERGITID---ISLW---KFETTKY------------YITIIDAPGHRDFIKNMI 103
K E+ER ITI ISL+ K + KY I +ID+PGH DF +
Sbjct: 314 TRKDEQERCITIKSTAISLYYELKKDDMKYIKQDYDQDNNAFLINLIDSPGHVDFSSEVT 135
Query: 104 TGTSQADCAVLIV 116
D A+++V
Sbjct: 134 AALRVTDGALVVV 96
>04430
Length = 2037
Score = 28.5 bits (62), Expect(2) = 0.032, Method: Compositional matrix adjust.
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 258 GIGTVPVGRVETG 270
GIGTVPVGRVETG
Sbjct: 2027 GIGTVPVGRVETG 1989
Score = 26.2 bits (56), Expect(2) = 0.032, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 270 GILRPGMVVTFAPVNITTEVKS 291
GIL+PGMVVT P ++TEV
Sbjct: 1992 GILKPGMVVTL-PQPVSTEVSC 1930
>31464
Length = 946
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%)
Frame = +1
Query: 238 PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHE 297
P R D P + + + GTV G +G + V + + +VKS++M
Sbjct: 259 PRRNPDGPFIFSVDHCFSLRXQGTVLTGTAISGSVAVNDTVEIPAMKVQKKVKSMQMFRN 438
Query: 298 ALSEALPGDNVGFNVKNVSVKDIRRGNVC 326
+ + GD G V K + RG VC
Sbjct: 439 PVDRLVQGDRAGICVTQFDPKLLERGLVC 525
>35135
Length = 660
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 204 PSPNMPWFKGWKVERKEGNASGVS 227
PSP PWFK W +E+ + N +GVS
Sbjct: 208 PSPENPWFKEWYMEKHQCNLAGVS 279
>14064
Length = 1723
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 81 ETTKYYITIIDAPGHRDFIKNMITGTSQA--DCAVLIVAAGVGEFEAGISKNGQTREHAL 138
+++ IT+ID GH +++ I G + D A+L+V+A G G T+EH
Sbjct: 122 QSSSKLITLIDLAGHHRYLRTTIVGLTGNCPDFAMLVVSATSGIV-------GMTKEHLG 280
Query: 139 LAYTLG 144
A LG
Sbjct: 281 YALALG 298
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6754254|ref|NP_034610.1| heat shock protein 1, alpha
[Mus musculus]
(733 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01628 682 0.0
15623 323 e-101
11278 221 7e-58
27487 154 2e-37
25874 81 1e-15
>01628
Length = 2109
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/444 (74%), Positives = 381/444 (85%), Gaps = 1/444 (0%)
Frame = -3
Query: 291 LNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAPF 350
LNKTKP+WTRNPDDIT EEY EFYKSLTNDWE+HLAVKHFSVEGQLEFRALLF+P+RAPF
Sbjct: 1951 LNKTKPLWTRNPDDITAEEYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPKRAPF 1772
Query: 351 DLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKIL 410
D+FEN+KKKNNIKLYVRRVFIMDNCE++IPEYLNF++GVVDSEDLPLNISREMLQQSKIL
Sbjct: 1771 DMFENKKKKNNIKLYVRRVFIMDNCEDIIPEYLNFVKGVVDSEDLPLNISREMLQQSKIL 1592
Query: 411 KVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSA 470
KVIRKNLVKKC+EL +LAEDK+NY KFYEQF+KN+KLGIHEDS NRKK+S+ LRY++S
Sbjct: 1591 KVIRKNLVKKCMELIDDLAEDKDNYNKFYEQFAKNLKLGIHEDSTNRKKISDFLRYHSSQ 1412
Query: 471 SGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYC 530
S DEMV+ K+Y +RMK+NQK IY+ITGET++ V NSAFVER++K G EV+YM++PIDEYC
Sbjct: 1411 SADEMVTFKEYVSRMKDNQKDIYYITGETREAVQNSAFVERVKKRGFEVLYMVDPIDEYC 1232
Query: 531 VQQLKEFEGKTLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKIMKDILEKKVEKVVVS 590
VQQLKE++GK LV VT LCK MK+IL+KKVEKV VS
Sbjct: 1231 VQQLKEYDGKNLVCVTKEGLELPEDEAEKKKFEEAKAEFEGLCKAMKEILDKKVEKVTVS 1052
Query: 591 NRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQK 650
RLV+SPCCIVTS YGW+ANMERIMKAQALRD STMGYMAAKKH EINPDH I++TL+ K
Sbjct: 1051 QRLVSSPCCIVTSQYGWSANMERIMKAQALRDTSTMGYMAAKKHFEINPDHPIVKTLKVK 872
Query: 651 AEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTS 710
+ADKNDKSVKDL +LL+ETALLSSGF+LEDP +HANRI+RM+KLGLGIDEDD T + +
Sbjct: 871 CDADKNDKSVKDLCMLLFETALLSSGFTLEDPTSHANRIHRMVKLGLGIDEDDST-PEAA 695
Query: 711 AAVTEEMPPLEGD-DDTSRMEEVD 733
A ++MPPLEGD DD SRMEEVD
Sbjct: 694 EAPADDMPPLEGDEDDASRMEEVD 623
>15623
Length = 2811
Score = 323 bits (827), Expect(2) = e-101, Method: Compositional matrix adjust.
Identities = 151/186 (81%), Positives = 170/186 (91%)
Frame = -1
Query: 41 KEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPSKQDRTLTIVDTGIGMTK 100
+EIFLRELISNSSDALDKIRYESLTDPSKLD+GK+LHI ++P K+ +TLTI D+GIGMTK
Sbjct: 585 QEIFLRELISNSSDALDKIRYESLTDPSKLDAGKDLHIRIVPDKERKTLTIEDSGIGMTK 406
Query: 101 ADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQY 160
ADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVA++V V +K+NDDEQY
Sbjct: 405 ADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADRVVVESKNNDDEQY 226
Query: 161 AWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITL 220
WESSAGGSFT+ TG PMGRGT++ L +KEDQ EYLEERRIKE++KKHSQFIGYPI L
Sbjct: 225 TWESSAGGSFTIAAPTGTPMGRGTRITLFMKEDQQEYLEERRIKEVIKKHSQFIGYPIKL 46
Query: 221 FVEKER 226
VEKER
Sbjct: 45 LVEKER 28
Score = 63.5 bits (153), Expect(2) = e-101, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -2
Query: 1 MPEETQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNK 41
MPEET MEE EVETFAFQAEIAQLMSLIINTFYSNK
Sbjct: 692 MPEETAQ----MEETEVETFAFQAEIAQLMSLIINTFYSNK 582
>11278
Length = 988
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 149/214 (69%), Gaps = 4/214 (1%)
Frame = +1
Query: 15 EEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK 74
E+ E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKIR+ SLT+ L +
Sbjct: 250 EKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRFMSLTNKDVLHATD 429
Query: 75 ELHINLIPSKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADI---SMI 131
EL I + ++ L + DTGIGMT DL+ NLGTIAKSGT F+ + + +I
Sbjct: 430 ELSIKIKADTENHVLHVTDTGIGMTYNDLVKNLGTIAKSGTSDFLAKMGEASPTELNDLI 609
Query: 132 GQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHL 190
GQFGVGFYS++LVA++V V +KHNDDEQY WES A SF+V D G +GRGT + LHL
Sbjct: 610 GQFGVGFYSSFLVADRVVVTSKHNDDEQYVWESDA-ESFSVAKDPRGNTLGRGTTISLHL 786
Query: 191 KEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224
KE+ ++LE + +VKK+SQFI + I ++ K
Sbjct: 787 KEEAHDFLEAGTLTSLVKKYSQFINFNIYMWSSK 888
>27487
Length = 377
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 106/124 (85%)
Frame = -3
Query: 404 LQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSEL 463
LQQ+KILKVI+KN+VKKCLE+F E+AE+ ++YKKFYEQFSKN+KLGIHED+ NR KL +L
Sbjct: 372 LQQNKILKVIKKNIVKKCLEMFAEIAENNDDYKKFYEQFSKNLKLGIHEDTTNRTKLVDL 193
Query: 464 LRYYTSASGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMI 523
+R++TS SG++ +SLK+Y RMKE QK I++ITGE++ V S F+E+LRK G EV+Y++
Sbjct: 192 MRFHTSKSGEDQISLKEYIARMKEGQKDIFYITGESRAAVQASPFIEQLRKKGYEVLYLV 13
Query: 524 EPID 527
+PID
Sbjct: 12 DPID 1
>25874
Length = 476
Score = 81.3 bits (199), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = +1
Query: 130 MIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILH 189
+IGQFGVGFYS ++V ++V V TK + A + S+ GS E + RGTK+++H
Sbjct: 1 LIGQFGVGFYSTFMVGDRVDVFTKSHQPGSPALKWSSDGSGAYEVSEAEGVQRGTKIVVH 180
Query: 190 LKEDQTEYLEERRIKEIVKKHSQFIGYPITL 220
LK D ++ +E I +VKK+S F+G PI L
Sbjct: 181 LKGDSYDFAKEEIITGVVKKYSNFVGVPIYL 273
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6755152|ref|NP_035286.1| prolyl endopeptidase [Mus
musculus]
(710 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05811 687 0.0
02177 31 2.0
09774 30 2.3
02203 30 3.5
28249 28 8.6
>05811
Length = 2853
Score = 687 bits (1772), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 319/544 (58%), Positives = 410/544 (75%), Gaps = 1/544 (0%)
Frame = -2
Query: 1 MLSFQYPDVYRDETSVQEYHGHKICDPYSWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 60
M F YPD RD++ ++ G K+ DPY WLEDPDSE+TKAFV+AQN ++ P+++ CP+
Sbjct: 2696 MYKFNYPDARRDDSVEDDFFGKKVSDPYRWLEDPDSEETKAFVDAQNDVSKPYIKTCPLA 2517
Query: 61 GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNTLS 120
+++T+ +DYPKY C ++G +Y+YF+NTGLQNQ VLYVQDS++ EA V+ DPN LS
Sbjct: 2516 EKISDKITQRWDYPKYGCPRRRGDKYYYFHNTGLQNQSVLYVQDSVDSEATVYFDPNKLS 2337
Query: 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFTCMAWTH 180
GTVALR + FS+DG +AY LS SGSDWVT+KF + ++LPD L+ VKFT MAWT
Sbjct: 2336 SKGTVALRSHWFSDDGSMWAYTLSESGSDWVTMKFKRAPSGEDLPDTLKYVKFTSMAWTQ 2157
Query: 181 DGKGMFYNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240
D KG+FYN YP+ +GKSDGTET+++LH KL YH LGT+QSEDIL E P+ P+WM GAE+
Sbjct: 2156 DVKGIFYNRYPESEGKSDGTETTSSLHHKLYYHRLGTEQSEDILVGEMPEFPRWMIGAEI 1977
Query: 241 SDDGRYVLLSIWEGCDPVNRLWYCDLQQEPNGITGILKWVKLIDNFEGEYDYVTNEGTVF 300
SD GRY+LL+ EGCD VNRL+Y DL +GITG L +VK++DNF+ EY+Y+TN GTVF
Sbjct: 1976 SDCGRYLLLTPREGCDHVNRLFYVDLNTLTDGITGKLPYVKIVDNFDAEYEYITNVGTVF 1797
Query: 301 TFKTNRNSPNYRLINIDFTDPDESKWKVLVPEHEKD-VLEWVACVRSNFLVLCYLHDVKN 359
TFKTN+++P Y+L+NID + P+ W LV E E VLEW ACV LV+CYL DVK+
Sbjct: 1796 TFKTNKDAPRYKLVNIDLSKPEPENWVTLVEEDEGGAVLEWTACVNQRQLVMCYLKDVKS 1617
Query: 360 ILQLHDLTTGALLKTFPLDVGSVVGYSGRKKDSEIFYQFTSFLSPGVIYHCDLTKEELEP 419
L L+DL TGA PL VGS+ YSGR KD+E+FY+FTSFL+PG I+ DLTK EP
Sbjct: 1616 ELYLYDLETGASQYQVPLGVGSITAYSGRYKDTEMFYKFTSFLTPGEIFRLDLTKAPYEP 1437
Query: 420 MVFREVTVKGIDAADYQTIQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNIS 479
+FR + V G +A ++ +Q F+PSKDGTKIPMF++HK+G++L G HP LYGYGGF+IS
Sbjct: 1436 KLFRSIAVPGFNADKFEVVQKFFPSKDGTKIPMFLIHKQGLELTGDHPVVLYGYGGFSIS 1257
Query: 480 ITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIK 539
ITP++S R +FV+H+GG+ AVANIRGG EYGE WHK G L NKQNCFDDFQ AA++LI
Sbjct: 1256 ITPDFSPHRTVFVQHLGGIYAVANIRGGNEYGEKWHKAGSLGNKQNCFDDFQAAAQFLID 1077
Query: 540 EGYT 543
YT
Sbjct: 1076 NKYT 1065
Score = 230 bits (587), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 131/164 (79%)
Frame = -3
Query: 545 PKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKFTIGHAWTTDYGCSDT 604
P+R+ INGGSNGGLLV A NQRPDLF IAQVGV+DML+FHKFTIGHAW +D+GC+D
Sbjct: 1060 PERIAINGGSNGGLLVGASLNQRPDLFAAGIAQVGVLDMLRFHKFTIGHAWISDFGCADK 881
Query: 605 KQHFEWLLKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSR 664
+ F WL+KYSPLH + + QYP++LLLT DHDDRVVPLHSLKFIA LQ+ +GR
Sbjct: 880 EDEFGWLIKYSPLHAIP-SDPKGGQYPAVLLLTGDHDDRVVPLHSLKFIAQLQHXLGRRD 704
Query: 665 KQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIEW 708
Q+NPLLI VDT +GHGAGKPT+K IEEV+++++F+ L ++W
Sbjct: 703 NQTNPLLIRVDTDSGHGAGKPTSKYIEEVTEIYSFLCLTLGLQW 572
>02177
Length = 1030
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 280 VKLIDNFEGEYDYVTNEGTVFTFKTNRNSPNYRLINIDFTDPD 322
VK EG DY + F K N+P YRLI + FT+ D
Sbjct: 903 VKFRRRREGRTDYFARKRLTFQDKNKYNTPKYRLI-VRFTNKD 778
>09774
Length = 1829
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -3
Query: 575 IAQVGVMDMLKFHKFTIGHAWTTDYGCSDTKQHFEWLLKYSPLHNVKLP 623
+AQ G +++ FH ++ H C D H L + P H+++ P
Sbjct: 423 LAQCGGWELVSFHHLSVAHPG*CPTSCKDLCYHHHLLYQXRPPHHLERP 277
>02203
Length = 1671
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -3
Query: 575 IAQVGVMDMLKFHKFTIGHAWTTDYGCSDTKQHFEWLLKYSPLHNVKLP 623
+AQ G +++ FH ++ H C D H L + P H+++ P
Sbjct: 1432 LAQCGGWELVSFHHLSVAHPG*CPTSCKDLCYHHHLLYQXRPPHHLERP 1286
>28249
Length = 442
Score = 28.5 bits (62), Expect = 8.6, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Frame = -3
Query: 300 FTFKTNRNSPNYRLIN----IDFTDPDESKWKVLVPEHEKDVL------EWVACVRSNFL 349
++ KT P YR +N +++TDP + +K +L W C +
Sbjct: 437 YSLKTVNLQPRYRTLNEGIRLNYTDPSACAAR*CATLVKKKIL*PLQYQVWPICAPRS-- 264
Query: 350 VLCYLHDVKNILQLHDLTTGAL 371
V+C + D+K+ L+ LT G++
Sbjct: 263 VVCIIKDIKSRALLYFLTNGSV 198
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6755901|ref|NP_035783.1| tubulin, alpha 1 [Mus
musculus]
(451 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00276 686 0.0
12457 460 e-134
06360 341 4e-94
03702 282 2e-76
17215 244 6e-65
16482 214 5e-56
13181 184 6e-47
04882 172 2e-43
05902 137 8e-33
25015 115 4e-26
39157 96 3e-20
28905 91 1e-18
31457 87 2e-17
26304 29 4.7
>00276
Length = 1330
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/353 (92%), Positives = 335/353 (94%)
Frame = -3
Query: 80 TGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFH 139
TGTYRQL PEQL+TGKEDAANNYARGHYTIGKE++DLVLDRIRKLADQCTGLQGFL+FH
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 140 XXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSD 199
L MERLSVDYGKKSKLEF IYPAPQVSTAVVEPYNSILTTHTTLEHSD
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 200 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
CAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQTNL
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 260 VPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLY 319
VPYPRIHFPLATYAPVISAEKAYHEQL VAEITNACFEPANQ+VKCDPRHGKYMACC+LY
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDY
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 273
>12457
Length = 781
Score = 460 bits (1183), Expect(2) = e-134, Method: Compositional matrix adjust.
Identities = 220/239 (92%), Positives = 226/239 (94%)
Frame = -1
Query: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLA 126
VDLEPTV+DEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYTIGKEI+DLVLDRIRKLA
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 127 DQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 186
DQCTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 187 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 246
SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 247 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKC 305
ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVKC
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKC 2
Score = 38.1 bits (87), Expect(2) = e-134, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 20/28 (71%)
Frame = -2
Query: 45 GDDSFNTFFSETGAGKHVPRAVFVDLEP 72
GDDSF T SETGAGKHVPRAV P
Sbjct: 780 GDDSF-TPLSETGAGKHVPRAVSSXXSP 700
>06360
Length = 1896
Score = 341 bits (874), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 159/178 (89%), Positives = 166/178 (93%)
Frame = -1
Query: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 121 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVS 178
RIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVS
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVS 1177
>03702
Length = 1932
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/153 (90%), Positives = 142/153 (92%)
Frame = +1
Query: 155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICR 214
ERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICR
Sbjct: 1459 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICR 1638
Query: 215 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAP 274
RNLDIERP YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP P P P
Sbjct: 1639 RNLDIERPXYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTPH-PLPPGHLCP 1815
Query: 275 VISAEKAYHEQLSVAEITNACFEPANQMVKCDP 307
VISAEKAYHEQL+VAE+TNACFEPANQ+VKCDP
Sbjct: 1816 VISAEKAYHEQLTVAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 244 bits (622), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 114/116 (98%), Positives = 116/116 (100%)
Frame = +3
Query: 317 LLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 376
+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC
Sbjct: 3 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 182
Query: 377 MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDY
Sbjct: 183 MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 350
>16482
Length = 837
Score = 214 bits (545), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 149/248 (60%)
Frame = +1
Query: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 273
Query: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 274 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 453
Query: 121 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
+RK A+ C LQGF + H LL+ ++ +Y + FS+ P+P+VS
Sbjct: 454 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 633
Query: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 634 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 813
Query: 241 SLRFDGAL 248
LRF G L
Sbjct: 814 CLRFPGQL 837
>13181
Length = 1092
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 128/223 (57%)
Frame = -3
Query: 210 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 270 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 329
+AP+ S + L+V E+T F+ N M CDPRHG+Y+ ++RG + K+V+
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 389
+ ++ K + FV+W P K + PP ++ + + N+TAI E +
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFVGNSTAIQELFK 575
Query: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y
Sbjct: 574 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 446
>04882
Length = 1136
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 122/214 (57%)
Frame = +2
Query: 219 IERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISA 278
+ PTY +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 314 VHTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 493
Query: 279 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 338
+ L+V E+T F+ N M CDPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 494 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNK 673
Query: 339 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 398
+ FV+W P K + PP ++ + + N+TAI E + R+ +F M
Sbjct: 674 NSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIGNSTAIQELFKRISEQFTAM 829
Query: 399 YAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
+ ++AF+HWY GEGM+E EF+EA +M L +Y
Sbjct: 830 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 931
>05902
Length = 1127
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 158/289 (54%), Gaps = 9/289 (3%)
Frame = +2
Query: 153 LMERLSVDYGKKSKLEFSIYP-APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
L+E+L+ + KK +S++P ++S VV+PYNS+LT +++DC ++DN A+
Sbjct: 65 LLEKLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNR 244
Query: 212 ICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT 271
I L I+ PT+ +N+L+ ++S+ T +LR+ G +N DL +L+P PR+HF +
Sbjct: 245 IAADRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTG 424
Query: 272 YAPVIS-AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGK----YMACCLLYRGDVVPK 326
Y P+ + ++ A + +V ++ +P N MV P H + Y++ + +G+V P
Sbjct: 425 YTPLTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPT 601
Query: 327 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 386
V+ ++ I+ ++ QF+ W P +V ++ + P V ++ + ML+N T+I+
Sbjct: 602 QVHKSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGL-----MLANHTSISH 766
Query: 387 AWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDMAALEKDY 432
+ R+ ++D + + AF+ + E + + EF +RE + L +Y
Sbjct: 767 LFERILRQYDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEY 913
>25015
Length = 458
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 75/119 (63%)
Frame = -3
Query: 21 WELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80
WE+ EHGI P G D + + N +++E GK+VPRAV VDLEP +D VR+
Sbjct: 360 WEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRS 187
Query: 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFH 139
G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 186 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 10
>39157
Length = 488
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 270
Query: 61 HVPRAVFVDLEPTVIDEVRTGT--YRQLFHPEQLITGKEDAANNYARGHYTI-GKEIIDL 117
+VPRAV VDLEP +D VR+G+ ++F P+ + G+ A NN+ + T G E++D
Sbjct: 269 YVPRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDS 90
Query: 118 VLDRIRK 124
VLD +RK
Sbjct: 89 VLDVVRK 69
>28905
Length = 425
Score = 90.5 bits (223), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 59/103 (57%)
Frame = -1
Query: 258 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCL 317
N+VP+PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y+
Sbjct: 380 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 201
Query: 318 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 200 MFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 72
>31457
Length = 1530
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 67/122 (54%)
Frame = +3
Query: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 370
KY+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------G 389
Query: 371 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L
Sbjct: 390 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 569
Query: 431 DY 432
+Y
Sbjct: 570 EY 575
>26304
Length = 1290
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 106 GHYTIGKEIIDLVLDRIRKLADQCTGL 132
G T+GK I DL L++IR ++ QC L
Sbjct: 1103 GGSTLGKFIFDLQLNQIRNISLQCESL 1023
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6806903|ref|NP_033852.1| ATPase, Ca++ transporting,
slow twitch 2 isoform b [Mus musculus]
(998 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06342 1113 0.0
00499 263 2e-70
36566 143 3e-34
12151 84 1e-23
14773 87 4e-17
28890 85 2e-16
29829 80 5e-15
08160 78 2e-14
04985 68 2e-11
13525 49 7e-06
14321 49 1e-05
33697 44 3e-04
07486 35 0.17
11991 31 3.0
31731 30 4.2
>06342
Length = 2428
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/738 (72%), Positives = 622/738 (84%), Gaps = 1/738 (0%)
Frame = +2
Query: 145 IVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDK 204
+VPGDIVE++VGDKVPADIR+ I STTLR+DQ+ILTGESVSV+KHTDP+PDPRAVNQDK
Sbjct: 5 LVPGDIVEVSVGDKVPADIRILKIHSTTLRIDQAILTGESVSVMKHTDPIPDPRAVNQDK 184
Query: 205 KNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQLSKVI 264
KN+LFSGTN+AAGK G+V+ TG+ TEIGKIR+EM+ TEQE+TPLQQKLDEF QLSKVI
Sbjct: 185 KNLLFSGTNVAAGKCKGLVIGTGLTTEIGKIRNEMMDTEQEKTPLQQKLDEFSNQLSKVI 364
Query: 265 SLICIAVWIINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 324
++ICIAVW INIGHFNDP HGGSWI+GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR
Sbjct: 365 TIICIAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 544
Query: 325 RMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFILDKVEGDTCSLNEFSI 384
RMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVC++FI +++ + +F +
Sbjct: 545 RMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKLFIFSQIDTNQIKTTQFEV 724
Query: 385 TGSTYAPIGEVQKDDKPVKCHQYDGLVELATICALCNDSALDYNEAKGVYEKVGEATETA 444
TGSTYAP GE+ ++ K VK Y GL EL TIC +CNDS++DYNEAK YEKVGEATETA
Sbjct: 725 TGSTYAPDGELYQNGKKVKASDYPGLEELCTICGMCNDSSVDYNEAKTQYEKVGEATETA 904
Query: 445 LTCLVEKMNVFDTELKGLSKIERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPS 504
LT L EK+N ++T+ L+K E CN VI+ + +KEFTLEFSRDRKSMSV+C PNKP+
Sbjct: 905 LTVLAEKLNFYNTDKSSLNKREMGTVCNHVIQDMWRKEFTLEFSRDRKSMSVFCVPNKPT 1084
Query: 505 RT-SMSKMFVKGAPEGVIDRCTHIRVGSTKVPMTPGVKQKIMSVIREWGSGSDTLRCLAL 563
R ++MF KGAPEG++DRCTH+R+G+ KVPM+P +K +IM + + +G+G DTLRCLAL
Sbjct: 1085RVPGGARMFAKGAPEGLLDRCTHVRIGNNKVPMSPAIKNEIMKLTKIYGTGRDTLRCLAL 1264
Query: 564 ATHDNPLKREEMHLEDSANFIKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMI 623
AT DNP +RE+M LEDS FI+YETN+TFVG VGMLDPPR EV +S+K CR AGIRVI+I
Sbjct: 1265ATIDNPPRREDMDLEDSRKFIEYETNMTFVGVVGMLDPPREEVMASIKNCRAAGIRVIVI 1444
Query: 624 TGDNKGTAVAICRRIGIFGQDEDVTSKAFTGREFDELSPSAQRDACLNARCFARVEPSHK 683
TGDNK TA AICRRIG+F + E+ A+TGREFDEL P QR A + AR FARVEP+HK
Sbjct: 1445TGDNKATAEAICRRIGVFSESENTEGLAYTGREFDELPPEDQRAAVMRARLFARVEPAHK 1624
Query: 684 SKIVEFLQSFDEITAMTGDGVNDAPALKKSEIGIAMGSGTAVAKTASEMVLADDNFSTIV 743
SKIVE+LQ+ EI+AMTGDGVNDAPALKK+EIGIAMGSGTAVAK+ASEMVLADDNFSTIV
Sbjct: 1625SKIVEYLQAEGEISAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIV 1804
Query: 744 AAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPA 803
AAVEEGRAIYNNMKQFIRYLISSN+GEVVCIFLTAALG PEALIPVQLLWVNLVTDG PA
Sbjct: 1805AAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGIPEALIPVQLLWVNLVTDGFPA 1984
Query: 804 TALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYVXXXXXXXXXXXXXXXXXXPR 863
TALGFNPPDLDIM KPPRNP+E LI+GWLFFRY+AIG YV PR
Sbjct: 1985TALGFNPPDLDIMQKPPRNPREGLITGWLFFRYMAIGIYVGCATVGAAAWWFMLYDKGPR 2164
Query: 864 VSFYQLSHFLQCKEDNPD 881
+++YQL+H +QC + D
Sbjct: 2165LNYYQLTHHMQCPAEPQD 2218
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 60/69 (86%)
Frame = +3
Query: 882 FDGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMS 941
F GVDC IF +P PMTMALSVLVTIEM NALNSLSENQSL MPPW N WLVG+ICLSM+
Sbjct: 2220 FKGVDCNIFSAPEPMTMALSVLVTIEMLNALNSLSENQSLTVMPPWINKWLVGAICLSMA 2399
Query: 942 LHFLILYVE 950
LHFLILYV+
Sbjct: 2400 LHFLILYVD 2426
>00499
Length = 4026
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 296/559 (52%), Gaps = 39/559 (6%)
Frame = +2
Query: 310 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFIL 369
GL A +T CL L +RMA+KN +V++L +VETLG TS ICSDKTGTLT N+M+V M+
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 181
Query: 370 DK-VEGDTCSLNEFSITGSTYAPIGEVQKDDKPVKCHQYDGLVELATICALCNDSALDYN 428
+ VE DT S ++ + T S P + L+ + LCN +
Sbjct: 182 GRIVEADT-SDDQSNATYSRSDPT-----------------WMALSRVAMLCNRA----- 292
Query: 429 EAKGVYEKV--------GEATETALTCLVEKMNVFDTELKGLSKIERANACNSVIKQLMK 480
E KG + V G+A+E+AL VE + +++ R N +++++
Sbjct: 293 EFKGNQDNVPILKRECNGDASESALLKCVE------LSIGHVTEYRRRN------EKIVE 436
Query: 481 KEFTLEFSRDRKSMSVYCT--PNKPSRTSMSKMFVKGAPEGVIDRCTHIRVGSTKVPMTP 538
F S ++ +S++ T P+ P + +KGAPE ++DRC+ I + + P+
Sbjct: 437 IPFN---SSNKYQVSIHETEDPDDPRYL----LVMKGAPERIMDRCSTILLNGKEQPLDD 595
Query: 539 GVKQKIMSVIREWGSGSDTLRCLALATHDNPLKREEMHLE---DSANFIKYETNLTFVGC 595
++ + E G + R L + P+ + E + NF T L FVG
Sbjct: 596 NFREAFNAAYLELGGLGE--RVLGFCDYFLPVDQFPPGYEFDPEGPNFPI--TGLRFVGL 763
Query: 596 VGMLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQD----EDVTSK- 650
+ M+DPPR V +V CR AGI+VIM+TGD+ TA AI R +GI + ED+ S+
Sbjct: 764 MAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIARGVGIISEGSKTVEDIASER 943
Query: 651 ---------------AFTGREFDELSPSAQRDACLNARC---FARVEPSHKSKIVEFLQS 692
G + +++P AQ D L FAR P K IVE Q
Sbjct: 944 GIPVEEVDPREAKAAVIHGGDLRDMTP-AQIDEILRNHSEIVFARTSPQQKLIIVEGCQR 1120
Query: 693 FDEITAMTGDGVNDAPALKKSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRA 751
+I A+TGDGVND+PALKK++IG+AMG +G+ V+K A++M+L DDNF++IV VEEGR
Sbjct: 1121QGQIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRL 1300
Query: 752 IYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPP 811
I++N+K+ I Y ++SN+ E+ L P L + +L ++L TD +PA +L +
Sbjct: 1301IFDNLKKSIAYTLTSNIPEISPFLLFILADIPLPLGTITILCIDLGTDMVPAISLAYEKA 1480
Query: 812 DLDIMNKPPRNP-KEPLIS 829
+ DIM + PR+P K+ L++
Sbjct: 1481ENDIMKRQPRDPVKDKLVN 1537
>36566
Length = 589
Score = 143 bits (361), Expect = 3e-34, Method: Composition-based stats.
Identities = 69/160 (43%), Positives = 107/160 (66%), Gaps = 1/160 (0%)
Frame = +3
Query: 680 PSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKSEIGIAMG-SGTAVAKTASEMVLADDN 738
P S+ LQ + MTGDGVNDA ALK +EIGI+MG SGT V+K AS+M+L DD+
Sbjct: 78 PGTSSRSSRRLQQNGLVVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDD 257
Query: 739 FSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVT 798
F+TI+ A+EEG+ I+ N++ F+R+ +S+++ + I ++ L P L +Q+LW+N++
Sbjct: 258 FTTILNAIEEGKGIFYNIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIM 437
Query: 799 DGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLA 838
DG PA +LG P D D++ +PPR+ +P+I+ L L+
Sbjct: 438 DGPPAQSLGVEPVDHDVIKQPPRHVGDPIITRRLIINVLS 557
>12151
Length = 880
Score = 83.6 bits (205), Expect(2) = 1e-23, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 1/133 (0%)
Frame = +3
Query: 711 KKSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 769
+K+++G AMG SGT VAK AS+++L DDNF++IV AV GR +Y+++ +F+++ ++ NV
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 770 EVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLIS 829
V F+ A L +Q+LWVNL+ D L + AL P +++ + P +PLIS
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPYGRTKPLIS 647
Query: 830 GWLFFRYLAIGCY 842
++ L Y
Sbjct: 648 KTMWKNILGHAFY 686
Score = 45.8 bits (107), Expect(2) = 1e-23, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Frame = +1
Query: 626 DNKGTAVAICRRIGIFGQDEDVTSKAFTGREFDELSPSAQRDACL--------NARCFAR 677
DN TA +I + GI +D G+EF++L A+ + N R AR
Sbjct: 1 DNVNTARSIASKCGIIQPGDD--GLVLEGKEFNQLIRDAEGEISQEKVDEVWPNLRVLAR 174
Query: 678 VEPSHKSKIVEFL-----QSFDEITAMTGDGVNDAPALKK 712
P K +V+ + + E+ A+TGDG ND PALKK
Sbjct: 175 SSPQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPALKK 294
>14773
Length = 794
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 69/105 (65%)
Frame = +2
Query: 725 VAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPE 784
V+K A++M+L DDNF++IV VEEGR I++N+K+ I Y ++SN+ E+ + G P
Sbjct: 8 VSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGTPL 187
Query: 785 ALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLIS 829
L + +L+++L TD +PA +L + + DIM +PPR + L++
Sbjct: 188 PLGVITILFIDLGTDMVPAISLAYEMAESDIMKRPPRTISDRLVN 322
>28890
Length = 552
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Frame = -3
Query: 102 AIVGVWQERNAENAIEALKEYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPA 161
+ +QE + +++ K P+ V R D+K +KA+++V GDIVE GD+VPA
Sbjct: 544 GVFSYYQEAKSSKIMDSFKNLVPQFAVVVRGDQK--LSVKAEELVVGDIVECKFGDRVPA 371
Query: 162 DIRLTSIKSTTLRVDQSILTGES-----VSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAA 216
D+R+ I + +VD S LTGES + H +P+ + +N+ F TN
Sbjct: 370 DLRV--ISAHGFKVDNSSLTGESEPQSRSAEFTHENPL--------ETRNICFFSTNAVE 221
Query: 217 GKAMGVVVATGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQLSKVISLICIAVWIIN- 275
G G+V+ TG +T +G+I + E TP+ +++ F ++ V + ++ ++I
Sbjct: 220 GTCRGIVIKTGDDTVMGRIANLASGLEVGDTPIAKEIAHFIHIITGVAVFLGVSFFVIAF 41
Query: 276 -IGHFNDPVHGGSWIRGAIY 294
+G+F W+ I+
Sbjct: 40 ILGYF--------WLDAVIF 5
>29829
Length = 465
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Frame = -3
Query: 715 IGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVC 773
+G AMG SGT VAK AS+++L DDNF++IV AV GR +Y+++ +F+++ ++ NV V
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 774 IFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLF 833
F+ A L +Q+LWVNL+ D L + AL P +++ + P +PLIS +F
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYGRTKPLISKTMF 101
>08160
Length = 459
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Frame = +2
Query: 310 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFIL 369
GL A +T CL L +RMA+KN +V++L +VETLG TS ICSDKTGTLT N+M+V M+
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 181
Query: 370 DK-VEGDTC---SLNEFSITGSTYAPIGEV 395
+ VE DT S +S T T+ + V
Sbjct: 182 GRIVEADTSDDQSNATYSRTDVTWMALARV 271
>04985
Length = 1671
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Frame = -1
Query: 656 EFDELSPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKSEI 715
F EL P C FAR+ P K ++E LQS+D I M GDG ND ALK +
Sbjct: 1650 HFPELLP----KVCTQGTVFARMAPDQKCALIENLQSYDYIVGMCGDGANDCEALKAAHA 1483
Query: 716 GIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAI---------YNNMKQFIRYLISS 766
GI++ A A A+ +N +V A+ EGRA Y + FI+++
Sbjct: 1482 GISLSE--AEASVAAPFTSRINNIECVVTAMREGRAALVTSFGCFKYMALYSFIQFI--- 1318
Query: 767 NVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFN-PPDLDIMNKPP 820
V I T + ++ L+++L+ A LG+ D + +KPP
Sbjct: 1317 ----SVLILYTCQTNLSD----LEFLYIDLIITTTIAVLLGYTGAYDKLVRHKPP 1177
>13525
Length = 645
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 321 LGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTG 354
L +RMA+KN +V++L +VETLG TS ICSDKTG
Sbjct: 2 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 103
>14321
Length = 568
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +2
Query: 671 NARCFARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKSEIGIAM 719
N R FARV P K I+ L++ +T M GDG ND ALK +++G+A+
Sbjct: 257 NTRVFARVAPKQKELIITVLKAQGFVTLMCGDGTNDVGALKHADVGVAL 403
>33697
Length = 310
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -2
Query: 598 MLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTA 631
M+DPPR V +V CR AGI+VIM+TGD+ T+
Sbjct: 201 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITS 100
>07486
Length = 763
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = -1
Query: 709 ALKKSEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGR 750
AL ++++GIA+G+GT VA A+++VL + + AA++ R
Sbjct: 742 ALAQADVGIAIGTGTDVAVEAADIVLMKSDLVDVYAAIKLSR 617
>11991
Length = 881
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = -2
Query: 64 ILLLAACISFVLAWFEEGEETITAFVEPFVILLILVANAIVGVWQERNAENAI-----EA 118
++L+ ACI F AW E I F F+I + +A I+G + ++ + E
Sbjct: 709 VVLVIACIGFCGAWMESQCMLIMFFTAIFIIFAMEIAVGIIGFIYRDDIDSELNTQLKEG 530
Query: 119 LKE 121
LKE
Sbjct: 529 LKE 521
>31731
Length = 579
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -1
Query: 70 CISFVLAWFEEGEETITAFVEPFVILLI 97
CISFVL W +GE+ I ++ FV+L++
Sbjct: 165 CISFVLNWLIQGEKLIESY-NTFVLLIV 85
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|7549752|ref|NP_036172.1| cullin 1 [Mus musculus]
(776 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02265 631 0.0
02365 242 1e-84
33018 44 3e-04
01055 30 3.7
03172 30 4.9
>02265
Length = 1094
Score = 631 bits (1627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/356 (83%), Positives = 327/356 (91%)
Frame = +3
Query: 79 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 138
GGAQFVG ELYKR+K+FLKNYL NLLKDG+DL+DE VL+FYT+QWEDY+FSSKVL+GICA
Sbjct: 27 GGAQFVGHELYKRMKDFLKNYLVNLLKDGQDLLDEQVLQFYTRQWEDYQFSSKVLDGICA 206
Query: 139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINT 198
YLNRHWVRRECDEG KGIY IYSLAL+TWR+CLF+PLNKQVTNAVLKLIEKERNGETINT
Sbjct: 207 YLNRHWVRRECDEGTKGIYYIYSLALITWRECLFKPLNKQVTNAVLKLIEKERNGETINT 386
Query: 199 RLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVT 258
RL+SGV+ YVELGLNE+D AKGPTL VYK+ FE+ FL DTER+YTRESTEFL+QNPVT
Sbjct: 387 RLVSGVINCYVELGLNEEDPSAKGPTLGVYKDHFETPFLDDTERYYTRESTEFLRQNPVT 566
Query: 259 EYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNED 318
EYMKKAE RL EEQ+RVQ YLHEST D LA+ CE+VLIEKHLEIFH EFQNLLD DKNED
Sbjct: 567 EYMKKAEMRLKEEQKRVQTYLHESTHDSLAKVCERVLIEKHLEIFHFEFQNLLDTDKNED 746
Query: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
LGRMY LVSRI DGLGELK LLE+HIH QGLAAIE+CG+AALNDPK+YVQT+LDVHKKYN
Sbjct: 747 LGRMYMLVSRILDGLGELKTLLESHIHTQGLAAIERCGDAALNDPKVYVQTILDVHKKYN 926
Query: 379 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSS 434
ALV++AF NDAGFVAALDKACGRFINNN+VTKM ++SKSPELLARYCD LLKKSS
Sbjct: 927 ALVLTAFVNDAGFVAALDKACGRFINNNSVTKMVNNTSKSPELLARYCDLLLKKSS 1094
>02365
Length = 1804
Score = 242 bits (617), Expect(2) = 1e-84, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 232/426 (54%), Gaps = 26/426 (6%)
Frame = +1
Query: 377 YNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKN 436
+N + +FN D F + FIN N KSPE L+ + D LKK K
Sbjct: 529 FNHFLHESFNEDKQFKQMISSGFEHFINLNP---------KSPEYLSLFIDDKLKKGVKG 681
Query: 437 PEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQAC 496
E E+E L++ MV+F+Y+++KDVF+++Y + LA+RL+ S SDD+E +MISKLK C
Sbjct: 682 MSEQEIEVVLDKSMVLFRYLQEKDVFERYYKQHLARRLLLNKSGSDDSEKNMISKLKTEC 861
Query: 497 GFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDL---DFSIQVLSSGSWPFQQSCTF 553
G ++TSKL+ MF+D+ VS +N++FK + ++ ++L + +++VL++G WP Q +
Sbjct: 862 GCQFTSKLEGMFKDMTVSSGINDEFKASVQQTQVVNLSGVELTVRVLTTGYWPTQSATPI 1041
Query: 554 ALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCF------------------ 595
+P + +++ F FY ++HSGR+LT L +L + F
Sbjct: 1042NIPVDPRTAFEAFRRFYLAKHSGRQLTLQPHLGSADLHASFFGQKKDDSADSAAASSSKP 1221
Query: 596 --KNRYTLQASTFQMAILLQYNTEDAYTVQQL-TDSTQIKMDILAXXXXXXXXXXXXXXE 652
++ LQ ST+QM ILL +N D +T +++ T++ +++
Sbjct: 1222AGPRKHILQVSTYQMCILLLFNNRDKWTFEEIKTETDMPDRELIRALQSLAVGKLAQRVL 1401
Query: 653 DENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPM--KTEQKQEQETTHKNIEEDRKLL 710
+ E+E PD + + + +K +RV I + K E + E++ T ++EDRK
Sbjct: 1402HKEPKTKEIE--PDHIFTVNDQFTSKLIRVKIQMVASNKGEAEPERKETRNKVDEDRKHE 1575
Query: 711 IQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKD 770
I+AAIVRIMK RK L+H L+ EV L RF P VIKK I+ LIE+EYL R ++
Sbjct: 1576IEAAIVRIMKARKKLQHNVLVTEVTEMLKPRFLPSPVVIKKRIEGLIEREYLARSQEDRK 1755
Query: 771 TYSYLA 776
Y+Y+A
Sbjct: 1756IYTYVA 1773
Score = 90.9 bits (224), Expect(2) = 1e-84, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 90/156 (57%), Gaps = 4/156 (2%)
Frame = +3
Query: 226 TVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQD 285
TVY+E FE FL + FY ES +FL +N + Y+KK EAR+ EE R YL +ST+D
Sbjct: 66 TVYEEDFEKPFLEQSAEFYRLESQKFLAENSASVYIKKVEARINEEAERATHYLDKSTED 245
Query: 286 ELARKCEQVLIEKHL----EIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLE 341
+ R E+ LI KH+ E+ ++ ++L+ +K +DL MY L R+ GL + + +
Sbjct: 246 PVVRVLEEELISKHMKTIVEMENSGVVHMLENNKTDDLACMYKLFFRVVYGLRTMCQCIS 425
Query: 342 THIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKY 377
+ QG A + + E + N YVQ++LD++ ++
Sbjct: 426 QFLREQGRALVIEEAEESKN-AITYVQSLLDLNDRF 530
>33018
Length = 814
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%)
Frame = -3
Query: 532 DLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELV 591
DLD S +LS+ WP + LP++L+ S +T Y + R L W L +
Sbjct: 704 DLDISAIILSAQFWPSFREEKITLPAQLQSSLDSYTQQYETLKGNRTLVWKPHLGVMNIE 525
Query: 592 TNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 631
S Q A+++Q+ ++ +TV+ L + ++
Sbjct: 524 LELKDQTLNFSVSPVQAALIMQFQDQNRWTVEDLGQALEM 405
>01055
Length = 522
Score = 30.0 bits (66), Expect = 3.7, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 106 DGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
+G + +S + FY +W +Y + + N IC YLN +V
Sbjct: 521 NGLLMSQDSRMFFYILEWSNYSAPNCLCNCICPYLNEKFV 402
>03172
Length = 2411
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 690 TEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQ 728
T Q + +T H+ EDR + IQA + + + R L+ Q
Sbjct: 1422 TRQSEVDKTVHREPREDRLITIQATLANVGQSRSCLQGQ 1538
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|7710014|ref|NP_057925.1| cullin 3 [Mus musculus]
(768 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02365 633 0.0
02265 133 3e-31
28450 29 5.9
>02365
Length = 1804
Score = 633 bits (1632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/418 (74%), Positives = 358/418 (85%), Gaps = 1/418 (0%)
Frame = +1
Query: 352 FDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETI 411
F+ FL ESFN D+ FKQ I+ FE+F+NLN +SPEYLSLFIDDKLKKGVKG++EQE+E +
Sbjct: 529 FNHFLHESFNEDKQFKQMISSGFEHFINLNPKSPEYLSLFIDDKLKKGVKGMSEQEIEVV 708
Query: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
LDK+MVLFR++QEKDVFERYYKQHLARRLL NKS SDDSEKNMISKLKTECGCQFTSKLE
Sbjct: 709 LDKSMVLFRYLQEKDVFERYYKQHLARRLLLNKSGSDDSEKNMISKLKTECGCQFTSKLE 888
Query: 472 GMFRDMSISNTTMDEFRQHLQATGV-SLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRH 530
GMF+DM++S+ DEF+ +Q T V +L GV+LTVRVLTTGYWPTQSATP NIP PR
Sbjct: 889 GMFKDMTVSSGINDEFKASVQQTQVVNLSGVELTVRVLTTGYWPTQSATP-INIPVDPRT 1065
Query: 531 AFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKH 590
AFE FRRFYLAKHSGRQLTLQ H+GSADL+A+F+G K + ++ G RKH
Sbjct: 1066AFEAFRRFYLAKHSGRQLTLQPHLGSADLHASFFGQKKDDSADSAAASSSKPAGP--RKH 1239
Query: 591 ILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKS 650
ILQVST+QM IL+LFNNR+K+TFEEI+ ETD+P+REL+RALQSLA GK QRVL KEPK+
Sbjct: 1240ILQVSTYQMCILLLFNNRDKWTFEEIKTETDMPDRELIRALQSLAVGKLAQRVLHKEPKT 1419
Query: 651 KEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRI 710
KEIE HIFTVNDQFTSKL RVKIQ VA+ +GE++PERKETR KVD+DRKHEIEAAIVRI
Sbjct: 1420KEIEPDHIFTVNDQFTSKLIRVKIQMVASNKGEAEPERKETRNKVDEDRKHEIEAAIVRI 1599
Query: 711 MKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
MK+RKK+QHNVLV EVT+ LK RFLPSPVVIKKRIEGLIEREYLAR+ EDRK+YTYVA
Sbjct: 1600MKARKKLQHNVLVTEVTEMLKPRFLPSPVVIKKRIEGLIEREYLARSQEDRKIYTYVA 1773
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 167/211 (79%), Gaps = 2/211 (0%)
Frame = +3
Query: 178 VDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKV 237
VDRGA++NACQMLMILG++ R+VYEEDFE PFLE SAEF+++ESQKFLAENSASVYIKKV
Sbjct: 3 VDRGAVKNACQMLMILGIDSRTVYEEDFEKPFLEQSAEFYRLESQKFLAENSASVYIKKV 182
Query: 238 EARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLA 297
EARINEE ER H LDKSTE+P+V+V+E ELISKHMKTIVEMENSG+VHML+N KT+DLA
Sbjct: 183 EARINEEAERATHYLDKSTEDPVVRVLEEELISKHMKTIVEMENSGVVHMLENNKTDDLA 362
Query: 298 CMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEG-EGKNPVDYIQGLLDLKSRFDRFL 356
CMYKLF RV GL+TMC+C+S +LREQG+ALV EE E KN + Y+Q LLDL RF F
Sbjct: 363 CMYKLFFRVVYGLRTMCQCISQFLREQGRALVIEEAEESKNAITYVQSLLDLNDRF*PFP 542
Query: 357 QESFNNDRLFKQTI-AGDFEYFLNLNSRSPE 386
F QT+ A DF+ L+ P+
Sbjct: 543 ARVFQRG----QTVQADDFQRL*TLH*PQPQ 623
>02265
Length = 1094
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 171/356 (48%), Gaps = 27/356 (7%)
Frame = +3
Query: 70 GEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRX 129
G +LY +++ + +L+N ++ D + L+ LQ + W D+Q + ++ I Y++R
Sbjct: 45 GHELYKRMKDFLKNYLVNLLK-DGQDLLDEQVLQFYTRQWEDYQFSSKVLDGICAYLNRH 221
Query: 130 XXX------XXXXXXXXXLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 183
L LI +R+ + + + + +L +I +ER GE ++ +
Sbjct: 222 WVRRECDEGTKGIYYIYSLALITWRECLFK--PLNKQVTNAVLKLIEKERNGETINTRLV 395
Query: 184 RNACQMLMILGLEGR---------SVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYI 234
+ LGL VY++ FE PFL+ + ++ ES +FL +N + Y+
Sbjct: 396 SGVINCYVELGLNEEDPSAKGPTLGVYKDHFETPFLDDTERYYTRESTEFLRQNPVTEYM 575
Query: 235 KKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI-VEMENSGLVHMLKNGKT 293
KK E R+ EE +RV L +ST + + KV ER LI KH++ E +N +L K
Sbjct: 576 KKAEMRLKEEQKRVQTYLHESTHDSLAKVCERVLIEKHLEIFHFEFQN-----LLDTDKN 740
Query: 294 EDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEG--KNPVDYIQGLLDLKSR 351
EDL MY L SR+ +GL + + ++ QG A + G+ +P Y+Q +LD+ +
Sbjct: 741 EDLGRMYMLVSRILDGLGELKTLLESHIHTQGLAAIERCGDAALNDPKVYVQTILDVHKK 920
Query: 352 FDRFLQESFNNDRLFKQTIAGDFEYFLNLN---------SRSPEYLSLFIDDKLKK 398
++ + +F ND F + F+N N S+SPE L+ + D LKK
Sbjct: 921 YNALVLTAFVNDAGFVAALDKACGRFINNNSVTKMVNNTSKSPELLARYCDLLLKK 1088
>28450
Length = 546
Score = 29.3 bits (64), Expect = 5.9, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 281 NSGLVHMLKNGKTEDLACMYKLFSRVPN 308
+SG+ +M +N KTE +++L S+VPN
Sbjct: 295 DSGITYMARNQKTEPAEKIHRLTSKVPN 378
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|82996028|ref|XP_619533.2| PREDICTED: leucyl-tRNA
synthetase isoform 1 [Mus musculus]
(669 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
15076 547 0.0
07453 117 1e-26
10296 29 4.9
>15076
Length = 2760
Score = 547 bits (1409), Expect(4) = 0.0, Method: Compositional matrix adjust.
Identities = 268/433 (61%), Positives = 318/433 (73%), Gaps = 10/433 (2%)
Frame = +2
Query: 62 QEHACSRTYGLGTRLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGDLNGQAESPLGIRPQ 121
EHA SRTYGLGTRLPWD Q+LIESLSDST+YMA+Y VAHLLQGG ++G P IRP+
Sbjct: 434 HEHALSRTYGLGTRLPWDSQYLIESLSDSTVYMAYYAVAHLLQGGVVDGSKPGPANIRPE 613
Query: 122 QMTKDVWDYVFFKDAPFPKTQIPKEKLDQLKQEFEFWYPVDLRASGKDLIPNHLSYYIYN 181
Q+T +VWDY+F + +PK IPK LD L+ EF +WYPVD+R SGKDLI NHL+Y+IY
Sbjct: 614 QLTLEVWDYIFTQTDNYPKCDIPKSTLDLLRSEFSYWYPVDVRMSGKDLIQNHLTYFIYC 793
Query: 182 HVAMWPEQSDKWPVSVRANGHLLLNSEKMSKSTGNFLTLSQAVDKFSADGMRLALADAGD 241
H AMWP KWP +RANGH+LLNSEKMSKSTGNFLTL AVDKFSADGMR +LADAGD
Sbjct: 794 HTAMWPNDKSKWPKGIRANGHILLNSEKMSKSTGNFLTLYDAVDKFSADGMRFSLADAGD 973
Query: 242 TVEDANFVEAMADAGILRLYTWVEWVKEMLASCSSLRSGPAD--SFNDRVFASEMNAGII 299
TVEDANFVE MADAG+LRLYT +EWV+EM A SLRSGP +FNDRVF SE+N I+
Sbjct: 974 TVEDANFVEKMADAGLLRLYTLLEWVREMAAQRDSLRSGPPKDYTFNDRVFLSEINKTIL 1153
Query: 300 KTDQNYEKMMFKEALKTGFFEFQAAKDKYRELATEGMHRELVFRFIEVQTILLTPFCPHL 359
+T Q+Y+ MFKEAL+TG FEFQ +DKYRE+ ++GMHR+LV RFIEVQ +L+ P CPH+
Sbjct: 1154ETQQHYDNFMFKEALRTGVFEFQGKRDKYREVESQGMHRDLVLRFIEVQALLMAPICPHM 1333
Query: 360 CEHIWTLLGK------PDSIMHASWPVA--GPVDESLIRSSQYLMEVAHDLRLRLKNYMM 411
EHIW L K +SIMHA+WP VDE LIRSS YLM+ AH+ RLRLK +
Sbjct: 1334AEHIWGELQKMQTGSTGZSIMHATWPQVKESDVDELLIRSSDYLMDAAHEFRLRLKTVLH 1513
Query: 412 PAKGKKTDKQPAQRPSHCTIYVAKNYPVWQHITLTTLRSHFEANNGKLPDNKVIASELGS 471
P K KK A P+H TI+VA+ YP WQ+ LTTL+ F AN G PDNKVI+SEL
Sbjct: 1514PGKNKK-----ATPPTHGTIWVARTYPPWQNAVLTTLKELFTANQG-FPDNKVISSELMK 1675
Query: 472 LPELKKYMKKVMP 484
+ + +K P
Sbjct: 1676KTDCRST*RKSCP 1714
Score = 105 bits (263), Expect(4) = 0.0, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Frame = +1
Query: 540 KVREECCPGKPLNVFRTEPGVPVSLVNPQPSSGHFSTKIDIRQGDSCESIIRRLMKTDRG 599
+VR++CCPGKP +RTEP V + VN Q SG F + + GD + RLMK++R
Sbjct: 1876 EVRDDCCPGKPFISYRTEPSVCLRFVNQQQCSGLFEVSVPVFDGDVTSKLAARLMKSERS 2055
Query: 600 -IKDLSKVKLMRFDDPLLGPRRVPVLGREHSEKTLISENAVFHVDLVSKKVHLTENGLRT 658
IKD+S VKL+R+ D G R +P L + +S +AVFH+D+ + V + ENG
Sbjct: 2056 KIKDVSSVKLLRYKDAEAGWRSIPELNGSGDKNVAMSASAVFHIDVQNNTVTVQENGSPV 2235
Query: 659 DIGDTMVYLV 668
+G MVY+V
Sbjct: 2236 PLGRQMVYMV 2265
Score = 87.4 bits (215), Expect(4) = 0.0, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Frame = +3
Query: 2 EPEKQVMSRSADECVVALCDQWYLDYGDENWKKQTFQCLKNMETFCEESRKNFEASLD 59
EPE QV+SRS DECVVALCDQW+LDYG+ +W+K+ +CL + TF E+ R NF A+LD
Sbjct: 252 EPENQVISRSGDECVVALCDQWFLDYGEASWRKEADECLAGLNTFSEDVRHNFTATLD 425
Score = 49.3 bits (116), Expect(4) = 0.0, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +3
Query: 487 AMIKENMEKKGPRVLDLELEFDEQAVLMENIVYLTNSLELEHIEVKF 533
A + N K G R LDL EFDE+ VL ++VYL+N+LELE ++++F
Sbjct: 1719 ASCQGNFSKHGQRALDLTSEFDEKQVLETSLVYLSNTLELEGLDIRF 1859
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 475 LKKYMKKVMPFVAMIKEN 492
L+KYMKKVMPFV + KE
Sbjct: 1684 LQKYMKKVMPFVQVAKET 1737
>07453
Length = 510
Score = 117 bits (294), Expect = 1e-26, Method: Composition-based stats.
Identities = 56/72 (77%), Positives = 59/72 (81%)
Frame = -3
Query: 187 PEQSDKWPVSVRANGHLLLNSEKMSKSTGNFLTLSQAVDKFSADGMRLALADAGDTVEDA 246
P KWP +RANGH+LLNSEKMSKSTGNFLTL AVDKFSADGMR +LADAGDTVEDA
Sbjct: 508 PNDKSKWPKGIRANGHILLNSEKMSKSTGNFLTLYDAVDKFSADGMRFSLADAGDTVEDA 329
Query: 247 NFVEAMADAGIL 258
NFVE MAD L
Sbjct: 328 NFVEKMADLSAL 293
Score = 79.3 bits (194), Expect(2) = 4e-22, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = -3
Query: 474 ELKKYMKKVMPFVAMIKENMEKKGPRVLDLELEFDEQAVLMENIVYLTNSLELEHIEVKF 533
EL+KYMKKVMPFV + KEN K G R LDL EFDE+ VL ++VYL+N+LELE ++++F
Sbjct: 196 ELQKYMKKVMPFVQVAKENFSKHGQRALDLTSEFDEKQVLETSLVYLSNTLELEGLDIRF 17
Query: 534 ASEAE 538
+ +A+
Sbjct: 16 SEDAD 2
Score = 44.3 bits (103), Expect(2) = 4e-22, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -1
Query: 435 KNYPVWQHITLTTLRSHFEANNGKLPDNKVIASEL 469
+ YP WQ+ LTTL+ F AN G PDNKVI+SEL
Sbjct: 309 RTYPPWQNAVLTTLKELFTANQG-FPDNKVISSEL 208
>10296
Length = 1682
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = +2
Query: 493 MEKKGPRVLDLELEFDEQAVLMENIVYLTNSLELEHIEVKFASEAEDKVREECCPGKPLN 552
+E++ PRV F QA+ + ++N LEL S E R CC +PL
Sbjct: 1145 LEQETPRVKSHVARFGAQALALG----VSNLLELAA-----PSSMECTTRSSCCVYRPLT 1297
Query: 553 VFRTEPGVPVSLVN 566
RT G SLV
Sbjct: 1298 ASRTSSG*LGSLVT 1339
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|8394027|ref|NP_058587.1| alpha isoform of regulatory
subunit A, protein phosphatase 2 [Mus musculus]
(589 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
26856 829 0.0
01469 46 4e-05
25614 41 0.001
30928 31 1.2
14913 31 1.6
36681 28 8.2
09672 28 8.5
>26856
Length = 2013
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/517 (77%), Positives = 453/517 (87%)
Frame = +1
Query: 73 LGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLV 132
LG FT LVGGP L LESLATVEETVVRDKAV+SLR I+ +HS SDLEAHFVPLV
Sbjct: 13 LGIFTPLVGGPRTCTLLTAALESLATVEETVVRDKAVDSLRNIAAQHSXSDLEAHFVPLV 192
Query: 133 KRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEF 192
KRL+ GDWFTSRTSACGLF+ CY RV+S+VKA+LRQ FRNLCSDDTPMVRRAAA KLGEF
Sbjct: 193 KRLSTGDWFTSRTSACGLFACCYARVASSVKADLRQLFRNLCSDDTPMVRRAAAGKLGEF 372
Query: 193 AKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAA 252
AK +E + +KS++IP+F+ LA DEQDSVRLLAVEACV+IA LLP ED E LVMPTLRQA+
Sbjct: 373 AKEVESEFLKSDLIPLFAMLAQDEQDSVRLLAVEACVSIASLLPSEDTEQLVMPTLRQAS 552
Query: 253 EDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCEN 312
EDKSWRVRYMVADKFTELQKAVGPEITK DLVPAFQ+L+KDCEAEVRAA+++KVK+FC+
Sbjct: 553 EDKSWRVRYMVADKFTELQKAVGPEITKNDLVPAFQSLLKDCEAEVRAASANKVKDFCQA 732
Query: 313 LSADCRENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQ 372
LS D RE +IMT ILPC+K+LV+DANQHVKSALASVIMGLSPILGKDNTIEHLLPLFL+Q
Sbjct: 733 LSPDVRETIIMTNILPCVKDLVADANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLSQ 912
Query: 373 LKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAG 432
LKDECP+VRLNIISNLDCVNEVIGI+QLSQSLLPAIVELAED KWRVRLAIIEYMPLLAG
Sbjct: 913 LKDECPDVRLNIISNLDCVNEVIGIKQLSQSLLPAIVELAEDTKWRVRLAIIEYMPLLAG 1092
Query: 433 QLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGD 492
QLGV+FFDEKLNSLCM WLVDHV+AIREAAT NLKKLVEKFG EWA T+IPKV +MS D
Sbjct: 1093QLGVQFFDEKLNSLCMTWLVDHVFAIREAATLNLKKLVEKFGPEWAQETVIPKVTSMSKD 1272
Query: 493 PNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILD 552
NYLHRMT LF IN+L+E GQ++T+K +LPT +A D V NVRFN AK+LQKI P+LD
Sbjct: 1273SNYLHRMTCLFSINLLAETMGQELTSKLLLPTRF-LARDTVPNVRFNAAKTLQKIAPLLD 1449
Query: 553 NSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVLSLA 589
ST+QS+VKPILE L D D+DV++FA +AL V+ +
Sbjct: 1450QSTVQSQVKPILETLKSDSDIDVQFFAADALDVIGVG 1560
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 159/402 (39%), Gaps = 48/402 (11%)
Frame = +1
Query: 68 ALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAH 127
A A +LG F V L+P LA E+ VR AVE+ +I+ D E
Sbjct: 346 AAAGKLGEFAKEVESEFLKSDLIPLFAMLAQDEQDSVRLLAVEACVSIASLLPSEDTEQL 525
Query: 128 FVPLVK----------RLAGGDWFTSRTSACG--------------LFSVCYPRVSSAVK 163
+P ++ R D FT A G L C V +A
Sbjct: 526 VMPTLRQASEDKSWRVRYMVADKFTELQKAVGPEITKNDLVPAFQSLLKDCEAEVRAASA 705
Query: 164 AELRQY--------------------FRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKS 203
+++ + ++L +D V+ A AS + + +L DN
Sbjct: 706 NKVKDFCQALSPDVRETIIMTNILPCVKDLVADANQHVKSALASVIMGLSPILGKDNTIE 885
Query: 204 EIIPMFSNLASDEQDSVRLLAVEA--CVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRY 261
++P+F + DE VRL + CVN +++ + L ++P + + AED WRVR
Sbjct: 886 HLLPLFLSQLKDECPDVRLNIISNLDCVN--EVIGIKQLSQSLLPAIVELAEDTKWRVRL 1059
Query: 262 MVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENV 321
+ + L +G + L + D +R AA+ +K+ E + +
Sbjct: 1060AIIEYMPLLAGQLGVQFFDEKLNSLCMTWLVDHVFAIREAATLNLKKLVEKFGPEWAQET 1239
Query: 322 IMTQILPCIKELVSDANQ-HVKSALASVIMGLSPILGKDNTIEHLLPL-FLAQLKDECPE 379
++P + + D+N H + L S+ + L+ +G++ T + LLP FLA +D P
Sbjct: 1240----VIPKVTSMSKDSNYLHRMTCLFSINL-LAETMGQELTSKLLLPTRFLA--RDTVPN 1398
Query: 380 VRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRL 421
VR N L + ++ + + P + L D+ V+
Sbjct: 1399VRFNAAKTLQKIAPLLDQSTVQSQVKPILETLKSDSDIDVQF 1524
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 5/220 (2%)
Frame = +1
Query: 13 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDED-EVLLALAE 71
+ + + +L++E +RLN I L + +G+++ LLP + + D V LA+ E
Sbjct: 892 LPLFLSQLKDECPDVRLNIISNLDCVNEVIGIKQLSQSLLPAIVELAEDTKWRVRLAIIE 1071
Query: 72 QLGTFTTLVGGPEYVHCLLPPLESLATV----EETVVRDKAVESLRAISHEHSPSDLEAH 127
+ L+ G V L SL +R+ A +L+ + + P +
Sbjct: 1072 ----YMPLLAGQLGVQFFDEKLNSLCMTWLVDHVFAIREAATLNLKKLVEKFGPEWAQET 1239
Query: 128 FVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAAS 187
+P V ++ + R + ++ + + ++L R L D P VR AA
Sbjct: 1240 VIPKVTSMSKDSNYLHRMTCLFSINLLAETMGQELTSKLLLPTRFLARDTVPNVRFNAAK 1419
Query: 188 KLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEA 227
L + A +L+ V+S++ P+ L SD V+ A +A
Sbjct: 1420 TLQKIAPLLDQSTVQSQVKPILETLKSDSDIDVQFFAADA 1539
>01469
Length = 2023
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Frame = +1
Query: 247 TLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKV 306
TL QA + W+VR +A E+ G IT DL+P F +KD + EVR +
Sbjct: 454 TLAQAMQ---WKVRRTLAFSIHEMALIEGEAITHNDLLPVFDGFIKDLD-EVRIGVLKHL 621
Query: 307 KEFCENLSADCRENVIMTQILPCIKELVSDANQ---HVKSALASVIMGLSPILGKDNTIE 363
+F L + R+ Q L + + + N + L+ ++ L + + +
Sbjct: 622 ADFLRLLRPNVRQ-----QYLAKVSDFMKTDNHRNWRFRKELSEQLIYLCELFDPRSIVR 786
Query: 364 HLLPLFLAQLKDECPEVR 381
H+ PL +A D+ EVR
Sbjct: 787 HICPLAVALCMDKVAEVR 840
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 23/276 (8%)
Frame = +1
Query: 329 CIKELVSDANQ----HVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNI 384
CIK L Q V+ LA I ++ I G+ T LLP+F +KD EVR+ +
Sbjct: 433 CIKHLYETLAQAMQWKVRRTLAFSIHEMALIEGEAITHNDLLPVFDGFIKD-LDEVRIGV 609
Query: 385 ISNLDCVNEVI--GIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEK 442
+ +L ++ +RQ + + ++ WR R + E + L E FD +
Sbjct: 610 LKHLADFLRLLRPNVRQQYLAKVSDFMKTDNHRNWRFRKELSEQLIYLC-----ELFDPR 774
Query: 443 -----LNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLH 497
+ L +A +D V +R A + L V + E ++ + + D L+
Sbjct: 775 SIVRHICPLAVALCMDKVAEVR-AVSFGLMSAVLRRVHEEGEDKLLQVICSDLSDQFALN 951
Query: 498 ------RMTTLFCINVLSE-VCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSL-QKIGP 549
++ C+ VL++ + + +LP +L + D + NVR +AK L Q++ P
Sbjct: 952 IKWLGRQIYCQMCLVVLADNAVPPPVFAELLLPGLLALGTDAIPNVRLTLAKVLAQRVAP 1131
Query: 550 ILDNSTLQSEVK----PILEKLTQDQDVDVKYFAQE 581
+ ++ Q+ L+ L D+D DV+YF+ +
Sbjct: 1132LDYFTSSQNPCHEALLTTLQALKTDKDQDVRYFSSQ 1239
>25614
Length = 433
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 48/116 (41%)
Frame = -2
Query: 365 LLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAII 424
LLP F L D VR +N V V+G + + LLP + L ED W VR A
Sbjct: 408 LLPRFSQMLTDPLFHVRKVCAANFGEVCSVVGKQSSEELLLPKLNSLCEDGVWGVRKACA 229
Query: 425 EYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHA 480
E ++ +E L L + L D +R +A +L + F AHA
Sbjct: 228 ECFMAISCACSLETRRGYLARLFVHLLADQSRWVRMSAFQHLGPFISTF----AHA 73
Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 44/101 (43%)
Frame = -2
Query: 451 LVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSE 510
L D ++ +R+ +N ++ GK+ + ++PK+ ++ D + R C +S
Sbjct: 384 LTDPLFHVRKVCAANFGEVCSVVGKQSSEELLLPKLNSLCEDGVWGVRKACAECFMAISC 205
Query: 511 VCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPIL 551
C + ++ + + D VR + + Q +GP +
Sbjct: 204 ACSLETRRGYLARLFVHLLADQSRWVRMS---AFQHLGPFI 91
>30928
Length = 343
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 205 IIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRY 261
I+P +DE + VR A+ A I +E L++P L + D +WR+RY
Sbjct: 89 ILPSILQALADESEFVRDTALRAGQRIISQYADTAIE-LLLPELERGLFDDNWRIRY 256
>14913
Length = 1174
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = -3
Query: 128 FVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQ-YFRNLC---SDDTPMVRR 183
+P+V++ D R ++ +V + V ++L + +++C +D PMVR
Sbjct: 272 LMPMVEKCMTSDKGKERRASYLAMAVVVEGCADYVMSKLMKVMLQSVCQGLNDSEPMVRN 93
Query: 184 AAASKLGEFAKVLELDNVK--SEIIPMF 209
AA LG+F++ L+ D K SE++P+
Sbjct: 92 AALFALGQFSEHLQPDITKFASELLPLL 9
>36681
Length = 1210
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = -3
Query: 78 TLVGGP-----EYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHS--PSDLEAHFVP 130
+LV GP YV LP + L V+ + VESL ++ H HS P+ +E HF
Sbjct: 227 SLVPGPFYHDARYVGVRLP-FQHLGIDMADHVQVERVESLGSVEHNHSFVPNCIEQHF-- 57
Query: 131 LVKRLAG 137
V RLAG
Sbjct: 56 -VCRLAG 39
>09672
Length = 1963
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = -2
Query: 310 CENLSADCRENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPIL-GKDN-----TIE 363
C L A C E+ ++ +LP +KE + A+ + A +M IL G D+ +E
Sbjct: 1959 CLMLMATCCEDDVVPHVLPFVKENIRHADWRYRDA---AVMAFGSILEGPDSEKLKPIVE 1789
Query: 364 HLLPLFLAQLKDECPEVR 381
+P+ + L D VR
Sbjct: 1788 QAMPMLIELLTDPSVVVR 1735
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|88014720|ref|NP_032405.3| karyopherin (importin) beta
1 [Mus musculus]
(876 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09672 763 0.0
26856 30 4.2
15415 30 4.6
10618 29 7.8
>09672
Length = 1963
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/526 (69%), Positives = 440/526 (83%), Gaps = 1/526 (0%)
Frame = -2
Query: 350 VCLMLLSTCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGSILEGPEPNQLKPLVIQA 409
VCLML++TCCEDD+VPHVLPF+KE+I++ DWRYRDAAVMAFGSILEGP+ +LKP+V QA
Sbjct: 1962 VCLMLMATCCEDDVVPHVLPFVKENIRHADWRYRDAAVMAFGSILEGPDSEKLKPIVEQA 1783
Query: 410 MPTLIELMKDPSVVVRDTTAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASN 469
MP LIEL+ DPSVVVRDT AWTVGR+CE+LPEA IN+ L PLL LI+GL AEPRVASN
Sbjct: 1782 MPMLIELLTDPSVVVRDTAAWTVGRVCEMLPEAVINENCLNPLLGALIKGLEAEPRVASN 1603
Query: 470 VCWAFSSLXXXXXXXXXXXXXXXXXXTYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAY 529
+CWAFSSL TYCLSS FE +VQ+LLETTDR DG+Q+NLR++AY
Sbjct: 1602 ICWAFSSLAEAAYESADTADEISEPETYCLSSYFETMVQRLLETTDRTDGNQHNLRNAAY 1423
Query: 530 ESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQ 589
E+LME+VKNS KDCY VQKTT++I+ERL++VL ME+ IQST+DR+Q+NDLQSLLCATLQ
Sbjct: 1422 EALMELVKNSPKDCYLIVQKTTVIILERLERVLGMEAAIQSTNDRVQYNDLQSLLCATLQ 1243
Query: 590 NVLRKVQHQDALQISDVVMASLLRMFQSTAG-SGGVQEDALMAVSTLVEVLGGEFLKYME 648
+V+RK+ +DA +ISD +M SLL MFQ+T+G +G VQEDAL+AVSTL EVLG F KY+E
Sbjct: 1242 SVVRKMTPEDAPKISDQIMTSLLSMFQNTSGKAGNVQEDALVAVSTLCEVLGDNFEKYLE 1063
Query: 649 AFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRS 708
AFKP+L +GLKNYAEYQVCLAAVGL+GD+CRAL +LPFC+E+M +LL+NLGNE+VHRS
Sbjct: 1062 AFKPYLLVGLKNYAEYQVCLAAVGLIGDMCRALGLKMLPFCNELMMVLLDNLGNESVHRS 883
Query: 709 VKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDFDMVDYLNELRESCLEA 768
VKPQILSVFGD+ALAIG FK YLEVVL TLQQASQAQVDK+D+DM+DYLNELRE CLEA
Sbjct: 882 VKPQILSVFGDVALAIGPNFKPYLEVVLTTLQQASQAQVDKTDYDMIDYLNELREGCLEA 703
Query: 769 YTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTA 828
YTGIVQGLKGD E + PDV L+QP V I+SFI+HI+ DED +D +A GL+GDLCTA
Sbjct: 702 YTGIVQGLKGDAEVLSPDVNLLQPHVAHIISFIEHISMDEDKSDSNIAACCGLLGDLCTA 523
Query: 829 FGKDVLKLVEARPMIHELLTEGRRSKTNKAKTLATWATKELRKLKN 874
F ++ ++E + +I LLT+GRRSK KAKTLATWATKE+RK+KN
Sbjct: 522 FSMSIMPMLE-KDVIQNLLTQGRRSKVQKAKTLATWATKEIRKMKN 388
>26856
Length = 2013
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 80/216 (37%)
Frame = +1
Query: 241 LVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEA 300
LVK +S + LFA + S + Q + N+C ++ + A+
Sbjct: 187 LVKRLSTGDWFTSRTSACGLFACCYARVASSVKADLRQ---LFRNLCSDDTPMVRRAA-- 351
Query: 301 AEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENXXXXXWNPCKAAGVCLMLLSTCCE 360
G+ E + ++ L+P+ + QDE A C+ + S
Sbjct: 352 --AGKLGEFAKEVESEFLKSDLIPLFA--MLAQDEQDSVRLL----AVEACVSIASLLPS 507
Query: 361 DDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGSILEGPEPNQLKPLVIQAMPTLIELMKDP 420
+D V+P +++ ++ WR R F + + P K ++ P L+KD
Sbjct: 508 EDTEQLVMPTLRQASEDKSWRVRYMVADKFTELQKAVGPEITKNDLV---PAFQSLLKDC 678
Query: 421 SVVVRDTTAWTVGRICELLPEAAINDVYLAPLLQCL 456
VR +A V C+ L + + +L C+
Sbjct: 679 EAEVRAASANKVKDFCQALSPDVRETIIMTNILPCV 786
>15415
Length = 392
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 653 FLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLL 697
F +G+ +Y E + + VG A QSNI+PF D +++LL
Sbjct: 166 FF*LGINSYPEMSISMDIVGET----EATQSNIIPFTDVNLRVLL 288
>10618
Length = 906
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = -2
Query: 106 PSSASQCVAGIA--------CAEIPV--SQWPELIPQLVANVTNPNSTEHMKESTLEAIG 155
PS S CV + CAEIPV QW ++ +A V + + E +++
Sbjct: 668 PSFQSGCVKILGMT*KHTAMCAEIPVMCRQWVKMSSSFMAKVCPQKTVLNFSEKAFKSL* 489
Query: 156 YICQDIDPEQL 166
+C+ ID ++
Sbjct: 488 KVCKFIDENRV 456
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|9790069|ref|NP_062667.1| HLA-B-associated transcript
1A [Mus musculus]
(428 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09316 756 0.0
01062 256 9e-69
00621 173 2e-43
02498 97 1e-41
07310 142 3e-34
02054 105 4e-34
01517 125 2e-29
00739 125 5e-29
00162 121 4e-28
19525 101 7e-22
08036 68 6e-19
09327 91 1e-18
33543 90 2e-18
04883 87 9e-18
31899 83 2e-16
14337 83 3e-16
34295 81 7e-16
03336 78 7e-15
00617 75 5e-14
19640 73 2e-13
11624 69 2e-12
19151 69 3e-12
10649 65 4e-11
12995 63 3e-10
11160 58 9e-09
33025 56 3e-08
39583 52 4e-07
03381 49 4e-06
31220 45 7e-05
19172 42 5e-04
06438 42 6e-04
33083 41 0.001
12121 35 0.047
11423 35 0.070
02305 29 3.3
>09316
Length = 2312
Score = 756 bits (1952), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 360/407 (88%), Positives = 384/407 (94%)
Frame = +2
Query: 19 ETAAGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQ 78
ETA G E AKKDVKG+YVSIHSSGFRDFLLKPELLRAI+DCGFEHPSEVQHECIPQ
Sbjct: 767 ETAVDGAGGEGQAKKDVKGTYVSIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQHECIPQ 946
Query: 79 AILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSK 138
AIL MDVLCQAKSGMGKTAVFVLATLQQLEPV GQVSVLVM HTRELAFQISKEYERFSK
Sbjct: 947 AILSMDVLCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMAHTRELAFQISKEYERFSK 1126
Query: 139 YMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDEC 198
YM NVK+AVFFGG+S+KKDEEVL KNCPHIVVGTPGR+ ALA+ +LNLK IKHFILDEC
Sbjct: 1127 YMNNVKIAVFFGGMSVKKDEEVLSKNCPHIVVGTPGRLHALAKANNLNLKKIKHFILDEC 1306
Query: 199 DKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLT 258
DKML LDMRRDVQEIFR+TPHEKQVMMFSATLSKEIRP+C+KFMQDPME++VDD++KLT
Sbjct: 1307 DKMLADLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPICKKFMQDPMEVYVDDDSKLT 1486
Query: 259 LHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIH 318
LHGLQQ+Y KLKDNEKNRKLF+LLDVLEFNQV+IFVKSV RC+AL+QLL+EQNFPAIAIH
Sbjct: 1487 LHGLQQHYCKLKDNEKNRKLFELLDVLEFNQVIIFVKSVPRCMALSQLLLEQNFPAIAIH 1666
Query: 319 RGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARA 378
R M QEERLSRYQQFKDFQ+RILVATNLFGRGMDIERVNI FNYDMPEDSDTYLHRVARA
Sbjct: 1667 RQMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARA 1846
Query: 379 GRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIE 425
GRFGTKGLAITFVSDENDAKILNDVQ+RFEVNI+ELPDEIDISSYIE
Sbjct: 1847 GRFGTKGLAITFVSDENDAKILNDVQERFEVNITELPDEIDISSYIE 1987
Score = 25.4 bits (54), Expect(2) = 0.0, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 1 MAENDVDNELLDYEDDEVE 19
MA++ D +LDYED+E++
Sbjct: 714 MADDTADENILDYEDEEMK 770
>01062
Length = 2138
Score = 256 bits (655), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 218/370 (58%), Gaps = 1/370 (0%)
Frame = -3
Query: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
F + ++ ELLR I GFE PS +Q + + G DV+ QA+SG GKTA F ++ LQ
Sbjct: 2073 FDNMGIREELLRGIYAYGFEKPSAIQQRAVKPIVKGRDVIAQAQSGTGKTATFSISVLQC 1894
Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
L+ + L++ TRELA QI K YM NV+ GG +I +D L
Sbjct: 1893 LDIQLRETQALILSPTRELATQIQKVMLALGDYM-NVQCHSCIGGTNIGEDIRKLDYG-Q 1720
Query: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226
HIV GTPGR+ + + ++L + IK ILDE D+ML + + + +++R P QV++
Sbjct: 1719 HIVSGTPGRVFDMIKRRNLRTRSIKMMILDEADEMLNK-GFKEQIYDVYRYLPPATQVIL 1543
Query: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVL 285
SATL EI + KFM DP+ I V + +LTL G++Q++V ++ E K L DL D L
Sbjct: 1542 ISATLPHEILEMTNKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 1366
Query: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
Q VIF + ++ L + + E NF ++H MPQ+ER + + F+ R+L+ T+
Sbjct: 1365 TITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKEREAIMKVFRAGDSRVLITTD 1186
Query: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405
++ RG+D+++V++ NYD+P + + Y+HR+ R+GRFG KG+AI FV + +D +IL D++
Sbjct: 1185 VWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKN-DDIRILRDIEQ 1009
Query: 406 RFEVNISELP 415
+ I E+P
Sbjct: 1008 YYSTQIDEMP 979
>00621
Length = 2263
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 209/417 (50%), Gaps = 34/417 (8%)
Frame = +1
Query: 36 KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95
KG + +++ L +++ I G++ P+ +Q + IP + D++ A++G GK
Sbjct: 226 KGGRIPNPIRFWKESDLGADIMEVIDRVGYKEPTPIQMQAIPIGLQNRDIIGVAETGSGK 405
Query: 96 TAVFV---------LATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVA 146
TA F+ L +++LE +++ TRELA QI +E +F + + ++V
Sbjct: 406 TAAFLIPLLVWIQSLPKIERLEDADQGPYAVILAPTRELAQQIEEETRKFGEGL-GIRVV 582
Query: 147 VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD 206
GG+S ++ L++ C +V+ TPGR++ + N+ L L + ++DE D+M+ +
Sbjct: 583 SVIGGISREEQGFKLQQGC-EVVIATPGRMIDVLENRYLVLNQCTYVVMDEADRMI-NMG 756
Query: 207 MRRDVQEIFRMTP------------------------HE-KQVMMFSATLSKEIRPVCRK 241
+V++I P H+ +Q +MF+AT+ ++ + R
Sbjct: 757 FEPEVRKILDYLPVSNQKPDNDDAEDDLKMLQNFKSKHKYRQTVMFTATMPPQVERLART 936
Query: 242 FMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCI 301
F++ P +++ + K + ++Q L ++EK +KL ++L+ ++IFV +
Sbjct: 937 FLRRPTVVYIGNVGK-PVERVEQIVYMLTESEKRKKLIEVLNAGVDPPIIIFVNQKKGAD 1113
Query: 302 ALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFN 361
LA+ L + F A +H G QE+R K + I+VAT++ GRG+DI+ V++ N
Sbjct: 1114VLAKSLEKMGFNATTLHGGKGQEQREYALASLKGGAKDIMVATDVAGRGIDIKDVSLVLN 1293
Query: 362 YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
YDM + Y HR+ R GR G +G +ITF++ E+ + Q +S P E+
Sbjct: 1294YDMARTIEDYTHRIGRTGRAGKEGTSITFLTKEDSMVFYDLKQLMLSSPVSTCPPEL 1464
>02498
Length = 1955
Score = 97.1 bits (240), Expect(2) = 1e-41, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 3/202 (1%)
Frame = +1
Query: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
+KD S+ S F LKP+LL+ + D GF PS++Q +P + ++++ Q+
Sbjct: 100 RKDPNSPLYSVKS--FEALNLKPQLLKGVYDMGFNAPSKIQETALPILLADPPVNMIAQS 273
Query: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
+SG GKTA FVL L +++ L + T ELA QI + E+ SK+M +++
Sbjct: 274 QSGTGKTAAFVLTMLSRVDISQTFPQCLCLAPTYELALQIGEVIEKMSKHMTGLEIRYAV 453
Query: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
G + + EVL + IV+GTPG ++ + R K+L L+ ++ F+LDE D M+ +
Sbjct: 454 RGERVNRG-EVLSE---QIVIGTPGTVMDWSHRFKALPLEKLRVFVLDEADVMISMQGHQ 621
Query: 209 RDVQEIFRMTPHEKQVMMFSAT 230
I + Q+++FSAT
Sbjct: 622 DQSTRIQKRLSSGCQMLLFSAT 687
Score = 90.9 bits (224), Expect(2) = 1e-41, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Frame = +3
Query: 233 KEIRP----VCRKFM-QDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLE 286
+ +RP VC QDP+ I + E + +L ++QYY+ E K L ++ +
Sbjct: 681 RHLRPSGDAVCSAHHPQDPVIISLKREEE-SLDNIKQYYIDCNSQEEKYVALCNIYGSIS 857
Query: 287 FNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNL 346
Q +IF LA+ + + + + E+R + ++F++ + ++L+ TN+
Sbjct: 858 VGQSMIFCHKRSTAAWLAERMTADHHAVGLLTGELTIEQRAAIIKRFREGKEKVLITTNV 1037
Query: 347 FGRGMDIERVNIAFNYDMP------EDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
RG+D+E V + N+D+P D +TYLHR+ R GRFG G+AI V + I+
Sbjct: 1038SARGIDVEMVTVVVNFDLPVTQDWRPDCETYLHRIGRTGRFGKNGIAINMVDNSRSMAIM 1217
Query: 401 NDVQDRFEVNISELPDE 417
++ F I +L E
Sbjct: 1218RSIEKHFGRKIEKLDTE 1268
>07310
Length = 712
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 133/241 (55%)
Frame = +2
Query: 175 RILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKE 234
RIL L + + +LDE DK+L Q D + + I P ++Q++++SAT
Sbjct: 2 RILDLMNKRLVKPDTCGILVLDEADKLLSQ-DFKGMLDNIIAHLPPQRQILLYSATFPLS 178
Query: 235 IRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFV 294
+ +K++++P EI + +E LTL G+ QYY +++ +K L L L+ NQ +IF
Sbjct: 179 VEQFMKKYLKNPYEINLMEE--LTLKGVTQYYAFVQEKQKVHCLNTLFSKLQINQSIIFC 352
Query: 295 KSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354
S QR LA+ + E + IH M Q+ R + F+ R LV ++LF RG+DI+
Sbjct: 353 NSTQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQ 532
Query: 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISEL 414
VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L+ ++ I +
Sbjct: 533 AVNVVINFDFPKHAETYLHRIGRSGRYGHLGVAINLITFE-DRFSLHKIEQELGTEIKPI 709
Query: 415 P 415
P
Sbjct: 710 P 712
>02054
Length = 1110
Score = 105 bits (263), Expect(2) = 4e-34, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 97/180 (53%)
Frame = -3
Query: 240 RKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQR 299
R ++DP+++ V ++ + T+ LQQ Y+ + K+ L +L+ L N ++F +
Sbjct: 778 RASLRDPVKVEVSNKYQ-TVDTLQQSYLFIPAKYKDAYLVSILNELAGNSFMVFCSTCAN 602
Query: 300 CIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIA 359
+A LL F AI +H M Q +RL +FK R IL+AT++ RG+DI V++
Sbjct: 601 TQRVALLLRNLGFTAIPLHGQMSQAKRLGSLNKFKSKDRSILIATDVASRGLDIPHVDVV 422
Query: 360 FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEID 419
N D+P S Y+HRV R R G G AITFVS + D ++ ++ +SE P E D
Sbjct: 421 LNLDIPTHSKDYMHRVGRTARAGRSGRAITFVS-QYDVELYQRIEHLIGKKLSEYPTEKD 245
Score = 57.0 bits (136), Expect(2) = 4e-34, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = -2
Query: 166 PHIVVGTPGRIL-ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQV 224
PHI++ TPGR++ L K +L+ +K ++DE D++L+ ++ + +V +I ++ P E+
Sbjct: 1001 PHIIIATPGRLVDHLENTKGFSLRALKFLVMDEADRILD-MNFQDEVDKILKVIPRERNT 825
Query: 225 MMFSATLSKEIRPVCRKFMQDP 246
+FSAT++ ++ + P
Sbjct: 824 YLFSATMTNKVAKTTASITEGP 759
>01517
Length = 2605
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 131/245 (53%), Gaps = 6/245 (2%)
Frame = +2
Query: 185 LNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRK 241
+ + H + +LDE D+ML+ + +RR V++ ++Q +MFSAT KEI+ + R
Sbjct: 26 IGMDHCNYLVLDEADRMLDMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPKEIQLLARD 205
Query: 242 FMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLL---DVLEFNQVVIFVKSVQ 298
F+ + + + V T + Q V +++ EK L DLL + ++FV++ +
Sbjct: 206 FLDNYIFLAVG-RVGSTSENITQKVVWVEEPEKRSFLLDLLMASGTGPESLTLVFVETKK 382
Query: 299 RCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI 358
+L Q L+ +N+PA +IH Q ER + FK+ R ILVAT + RG+DI V
Sbjct: 383 GADSLEQFLMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVAARGLDIPNVRH 562
Query: 359 AFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
N+D+P D + Y+HR+ R GR G GLA +F +D+N I D+ D E+P +
Sbjct: 563 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKN-RNIARDMLDLLTEANQEVPSWL 739
Query: 419 DISSY 423
+ +Y
Sbjct: 740 ESLAY 754
>00739
Length = 1313
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 134/255 (52%), Gaps = 5/255 (1%)
Frame = +3
Query: 166 PHIVVGTPGRIL-ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQV 224
PHIV+ TPGR+ + + +LK +K ++DE D++L+ + ++ I P +Q
Sbjct: 42 PHIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDD-NFGAQLEPILTRLPSARQT 218
Query: 225 MMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDV 284
++FSATLS + + + P +++ + T+ LQ+ YV + + K+ + +LD
Sbjct: 219 LLFSATLSPTVNALRDSVLNKPF-VWIQQSERATVDELQEDYVLVPASMKDAYMVHILDH 395
Query: 285 L----EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
+ ++IF + + L +L + F +H +PQ RLS +FK Q RI
Sbjct: 396 WLKDHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFRLSSLSRFKSNQTRI 575
Query: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
L++T++ RG+DI V++ N+++P Y+HRV R R G G +I+ V+ E D K++
Sbjct: 576 LISTDVASRGLDIPTVDLIINHNIPNRPRDYVHRVGRTARAGRCGQSISLVT-EFDIKLI 752
Query: 401 NDVQDRFEVNISELP 415
++ ++E P
Sbjct: 753 KSIESHINCQMTEHP 797
>00162
Length = 2322
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 163/322 (50%), Gaps = 10/322 (3%)
Frame = +3
Query: 77 PQAILGMDVLCQA--KSGMGKTAVFVLATLQQLEPVTGQ---VSVLVMCHTRELAFQISK 131
P D++C A + + K +F + + T + L++ TRELAFQI +
Sbjct: 12 PPTWPAEDLMCWALPRQALEKLWLFSFLFWRPCQNKTSSAYGMEALIITPTRELAFQIYE 191
Query: 132 EYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA-LARNKSLNLKHI 190
+ + + + GG + ++ ++ K +IV+ T GR+L L ++ ++ +
Sbjct: 192 VLNKIRTFH-DFSANLVIGGKFMWRETHLMGKT--NIVICTVGRLLHHLESTQAFDVSEL 362
Query: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
K +LDE D++++ +D+ I P +Q ++FSAT + ++ + R ++DP +
Sbjct: 363 KVLVLDEADRIMDS-KFAQDMDSIMSHLP-PRQTLLFSATQTMSVKTLARLSLKDPSYVS 536
Query: 251 VDDETK-LTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVE 309
VD + +T GL+Q Y+ + +EK L+ L N++++F+++ ++ +++
Sbjct: 537 VDRHAEYVTPTGLEQSYIVCELHEKLSLLYSFLKNHPNNKIMVFLQTCKQA-RYVHTVIK 713
Query: 310 QNFPAIAI---HRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPE 366
+ P +++ H G+PQ RL Y++F Q IL+ T+L RG+D VN D P
Sbjct: 714 RERPGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLDCPV 893
Query: 367 DSDTYLHRVARAGRFGTKGLAI 388
D +TY+HR R RF G A+
Sbjct: 894 DVNTYIHRAGRTARFECNGQAL 959
>19525
Length = 585
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Frame = +2
Query: 116 VLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGR 175
VLV+ TRELA Q+ + ++ S+Y + + + GGL IK E L+ CP IVV TPGR
Sbjct: 20 VLVLVPTRELAVQVYQVGQQISQY-TKISICLAAGGLDIKGQEAALRL-CPDIVVATPGR 193
Query: 176 ILALARNK-SLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKE 234
++ N + + H++ +LDE D+ML++ + EI RM ++Q M+FSAT+S
Sbjct: 194 LIDHLHNAPNFTIAHVEILVLDEADRMLDEY-FAAQMTEIIRMCNFQRQTMLFSATMSDA 370
Query: 235 IRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKN 275
++ + +++ +++FV+ T + L GLQQ +V++++N++
Sbjct: 371 VQDLASVSLKEAVKVFVNQNTDIAL-GLQQEFVRIRENKEG 490
>08036
Length = 1226
Score = 67.8 bits (164), Expect(2) = 6e-19, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 4/181 (2%)
Frame = +1
Query: 169 VVGTPGRILALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEKQVM 225
VVGTP RILA R L L ++ ++DE D + + DM++ ++E+ P Q
Sbjct: 1 VVGTPSRILAHLRAGHLELHTVQMLVVDEADLVFSFGHEADMKKLMEEL----PRIYQAF 168
Query: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDV- 284
+ SATLS++++ + + + +P+ + + + L QY+VK + ++K + +L +
Sbjct: 169 LMSATLSEDVKALKKMVLHNPVILKLKESQLPESTQLTQYHVKCEVDDKFTLMVAVLKLG 348
Query: 285 LEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVAT 344
L + ++FV SV C L L PA ++ +P + R QF + I++A+
Sbjct: 349 LVRGKSILFVNSVDSCYKLKLFLEPFGIPACVLNSELPVKSRCHIVSQFNEGLYDIIIAS 528
Query: 345 N 345
+
Sbjct: 529 D 531
Score = 44.3 bits (103), Expect(2) = 6e-19, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 GRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVS-DEND 396
RG+D + V+ N++ P+ D Y+HRV R R +G A++ +S END
Sbjct: 612 ARGIDFQNVSNVINFEFPKTVDAYIHRVGRTARGDKQGCALSLISRHEND 761
>09327
Length = 1087
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Frame = +2
Query: 115 SVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPG 174
+ ++ TRELA Q+ + F + V+ +GG L + I + TPG
Sbjct: 11 CIWLLVPTRELAQQVQEVAVEFG-HSSRVRSVCVYGGAQRGPQLRELDRG-AEICIATPG 184
Query: 175 RILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKE 234
R++ + NL+ + +LDE D+ML+ + +++I ++Q +M+SAT KE
Sbjct: 185 RLIDFLESNRTNLRRCTYLVLDEADRMLD-MGFEPQIRKIVEQIRPDRQTLMWSATWPKE 361
Query: 235 IRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL---EFNQVV 291
+R + F+ + +I + H + Q D+EK KL LL+ + + N+ +
Sbjct: 362 VRKLAEDFIMEYTQINIGALQLTANHNILQIIDVCMDHEKEEKLVKLLNEIMQEKENRTL 541
Query: 292 IFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGM 351
IFV++ ++C + + + +P + IH Q+ER F++ + +L+AT++ RG+
Sbjct: 542 IFVETKRKCDDIHRRMKRDGWPVLCIHGDKSQQERDWVLNDFRNGRCPVLLATDVASRGL 721
>33543
Length = 471
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 50/56 (89%)
Frame = +3
Query: 370 TYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIE 425
TYLHRV RAGRFGT+GLAITFVS+E +A +LN VQ+RFEV++++LP++I +S+Y E
Sbjct: 3 TYLHRVGRAGRFGTRGLAITFVSNETEADVLNSVQERFEVSVTDLPEQISVSTYTE 170
>04883
Length = 1155
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Frame = +3
Query: 65 FEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ------LEPVTGQVSVLV 118
+ P+ +Q + P A+ G D++ A++G GKT F+L + LE G + VL
Sbjct: 420 WTAPTPIQSQSWPVAMAGKDLVGIAQTGSGKTLAFMLPAIVHINHQAYLERGDGPI-VLA 596
Query: 119 MCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA 178
+ TRELA Q+ + + F + V+ +GG L++ I + TPGR++
Sbjct: 597 LVPTRELAQQVQEVAQEFG-HASRVRSVCVYGGAPRGPQLRDLERGA-EICIATPGRLID 770
Query: 179 LARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPV 238
+ NL+ + +LDE D+ML+ + +++I ++Q +M+SAT KE+R +
Sbjct: 771 FLESNRTNLRRCTYLVLDEADRMLD-MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRKL 947
Query: 239 CRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLD 283
F+ + +++ + H + Q ++EK KL LL+
Sbjct: 948 AEDFIDEYVQVNIGALELTANHNILQIIDVCMEHEKEDKLVKLLN 1082
>31899
Length = 453
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%)
Frame = -1
Query: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
F LL +L + + GFE PS +Q + IP G+D++ QAKSG GKT VF + L+
Sbjct: 339 FASLLLSKPVLNGLKNAGFERPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFSVVALEG 160
Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE 159
+E VLV+ TRE+A QI + M ++ F GGL + +D +
Sbjct: 159 IETTARSTQVLVLAPTREIALQIWEVINSIGSAMSGLQCHTFIGGLPVHEDRK 1
>14337
Length = 693
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%)
Frame = +2
Query: 290 VVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGR 349
V++FV+S QR L + AIH PQ ER + + F + + +LV T L GR
Sbjct: 65 VLVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDATVRAFTEGRVWVLVCTELMGR 244
Query: 350 GMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEV 409
G+D + +N+ NYD P ++ +Y+HR+ R GR G G AITF + E D L + + +
Sbjct: 245 GIDFKGINLVINYDFPTNAVSYIHRIGRTGRAGVPGRAITFFT-EQDVTHLRSIANIIKE 421
Query: 410 NISELPD 416
E+P+
Sbjct: 422 AGCEVPE 442
>34295
Length = 694
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%)
Frame = -1
Query: 290 VVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGR 349
V+IF + + C L+ L + +H M Q+ER+S +FK R L+AT++ R
Sbjct: 535 VMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLIATDVAAR 356
Query: 350 GMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEV 409
G+DI V + N+ +P Y+HRV R R G KG+AI+ D ++L +++
Sbjct: 355 GLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGVAISIFRFPRDLELLGAIEEEINT 176
Query: 410 NISELP 415
++E P
Sbjct: 175 KLTEHP 158
>03336
Length = 1352
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -1
Query: 386 LAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIE 425
LAITFVSDENDAKILNDVQ+RFEVNI+ELPDEIDISSYIE
Sbjct: 443 LAITFVSDENDAKILNDVQERFEVNITELPDEIDISSYIE 324
>00617
Length = 1505
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%)
Frame = -3
Query: 306 LLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMP 365
+L + F +H +PQ RLS +FK Q RIL++T++ RG+DI V++ N+++P
Sbjct: 1500 MLEKLQFSCAVLHSMIPQRFRLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIP 1321
Query: 366 EDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
Y+HRV R R G G +I+ V+ E D K++ ++ ++E P
Sbjct: 1320 NRPRDYVHRVGRTARAGRCGQSISLVT-EFDIKLIKSIESHINCQMTEHP 1174
>19640
Length = 456
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%)
Frame = -1
Query: 292 IFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGM 351
IF + ++ L Q + NF A+H M Q +R +QF+ R+L+ T+L RG+
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 352 DIERVNIAFNYDMPEDSDTYLHRVARAG 379
D+++V++ NYD+P + + Y+HR+ R G
Sbjct: 276 DVQQVSLVINYDLPSNRENYIHRIGRGG 193
>11624
Length = 2257
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Frame = -1
Query: 247 MEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQL 306
ME FV T T GL +Y V+ +EK + L L+F V+ F SV+ L L
Sbjct: 1018 MENFVGKYT--TPEGLTEYIVESDSSEKPLLVLHFLHNLKFRSVLCFTNSVETTHRLCLL 845
Query: 307 L-VEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMP 365
+ + +P E R +QF + +LV ++ RGMD++ V +YD P
Sbjct: 844 VKLYGGLSVKEFSSRLPGERRKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNP 665
Query: 366 EDSDTYLHRVARAGRFGTKGLAITFV 391
TY+HRV R R G G AI+ +
Sbjct: 664 PYIKTYIHRVGRTARAGRAGTAISLL 587
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Frame = -3
Query: 51 LLKPELLRAIVDCGFEHPSEVQHECIPQ--------------AILGMDVLCQAKSGMGKT 96
+L +L + D G + VQ E IP+ + D+ A +G GKT
Sbjct: 1952 VLDDQLRGKLHDSGIDRLFPVQREFIPELWKDVRYSLTAGRYGLRPRDICVSAPTGSGKT 1773
Query: 97 AVFVLATLQQL-EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPN--VKVAVFFGGLS 153
+ L +Q L + + V +++ R+LA Q+ Y+ F Y + +KV + G
Sbjct: 1772 LAYTLPIIQCLKQRMVPHVRAVIVLPVRDLAEQV---YQVFCHYCADTPLKVGIVVGKTV 1602
Query: 154 IKKDEEVLKK--------NCPHIVVGTPGRIL-ALARNKSLNLKHIKHFILDECDKMLEQ 204
+++ L K + I+V TPGR++ + +L H++ ++DE D+M+E
Sbjct: 1601 FNVEQDTLVKKRYGGVYHSVIDILVATPGRLVDHINSTPGFDLSHLRFLVIDEADRMMED 1422
Query: 205 LDMRR-DVQEIFRMTPHEKQVMMFSA--------TLSKEIRPVCRKFM 243
+ + V E TP + + S T+ R CR+ +
Sbjct: 1421 IKLDWLSVVETAAFTPTHRLTSL*SGHNQALSLLTVPSVYRCHCRRLL 1278
>19151
Length = 625
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 339 RILVATNLFGRGMDIERVNIAFNYDMP------EDSDTYLHRVARAGRFGTKGLAITFVS 392
++L+ TN+ RG+DIE+V I N+D+P D +TYLHR+ R GRFG G+AI +
Sbjct: 623 KVLITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIAINLID 444
Query: 393 DENDAKILNDVQDRFEVNISEL 414
E + ++ F+ +I L
Sbjct: 443 GEKSMNVCRAIEKHFQKDIVYL 378
>10649
Length = 472
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%)
Frame = +1
Query: 314 AIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLH 373
+ +H G+PQ RL Y++F Q IL+ T+L RG+D VN D P D +TY+H
Sbjct: 73 VLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLDCPVDVNTYIH 252
Query: 374 RVARAGRFGTKGLAI 388
R R RF G A+
Sbjct: 253 RAGRTARFECNGQAL 297
>12995
Length = 1072
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Frame = +3
Query: 246 PMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLL-DVLEFNQV-VIFVKSVQRCIAL 303
P + +D ++KL+ LQ ++ + ++K L LL DV+ N + V+FV + L
Sbjct: 3 PTLVRLDVDSKLSAQ-LQMSFLSCRADDKEAMLLYLLRDVISENDLTVVFVATKHHVEYL 179
Query: 304 AQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYD 363
LL + I+ + Q R +F Q ++++ T+L RG+DI +++ N+
Sbjct: 180 NTLLTKCGIACTYIYSSLDQTARKIHVAKFTHKQVKVMLVTDLAARGIDIPQLDNVVNFH 359
Query: 364 MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILN 401
P + ++HRV R R G G A + V+ + A +++
Sbjct: 360 FPAKAKLFVHRVGRVARAGRSGTAYSLVAMDEVAHLVD 473
>11160
Length = 646
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Frame = -1
Query: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILAL------ARNKSLNLKHIKHFILDECDKMLE 203
GG+S D K+ I++ TPGR+ L N + ++K ++ +LDE D++L+
Sbjct: 646 GGVSCSHDISKFMKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLLD 467
Query: 204 QLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKL------ 257
+ + I P ++ +FSAT + E+ + R +++P+ + V E KL
Sbjct: 466 -MGFEASINTILGHLPKLRRTGLFSATQTDEVENLIRAGLRNPLRVTV-KEKKLAGEADQ 293
Query: 258 -TLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCI-----ALAQLLVEQN 311
T L YY+ ++ EK +L L +++++F S C+ L QLL ++
Sbjct: 292 RTPSTLSNYYMIVEAEEKFSQLVKFLKTHHRDKLLLFF-STCACVDYFSMCLTQLL--KH 122
Query: 312 FPAIAIHRGMPQEERL 327
++IH M Q+ L
Sbjct: 121 MQVLSIHSKMKQKRNL 74
>33025
Length = 558
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Frame = +3
Query: 129 ISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLK 188
I E +FS+ +V +V +G + + + K ++VVGTPGR+L +++++L
Sbjct: 3 IYGEAYKFSR-GTDVHPSVVYGATDRRYQKSRIMKG-ANLVVGTPGRLLDFIGDQTISLG 176
Query: 189 HIKHFILDECDKMLE---QLDMRRDVQEIFRMTPH-EKQVMMFSATLSKEIRPVCRKFMQ 244
++ ILDE D+ML+ + ++R+ V + M P ++Q +MFSAT ++I+ + F+
Sbjct: 177 KCQYLILDEADRMLDMGFEPEIRKLV-DTHGMPPKTQRQTLMFSATFKEDIQRLAGDFLN 353
Query: 245 DPMEIFV 251
D + I V
Sbjct: 354 DYLFITV 374
>39583
Length = 234
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = -3
Query: 325 ERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFG 382
+RL ++FK+ + +L+AT+L RG+DIE V N+ MP Y+HRV R R G
Sbjct: 175 QRLEALKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTLKHYVHRVGRTARAG 2
>03381
Length = 1206
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND--AKILNDVQDRFE 408
+DI + NYD+ D DT+ HRV R GR G KG A T ++D++ A +L V++
Sbjct: 3 LDIPHIRTVVNYDVARDIDTHTHRVGRTGRAGEKGSAYTLITDKDKEFAPLL--VRNLEG 176
Query: 409 VNISELPDEIDISS---YIEQTR 428
N + P +D+++ + +TR
Sbjct: 177 ANQTPPPALLDLANQCPWFNKTR 245
>31220
Length = 818
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 348 GRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVS 392
RG+D + VN N+D P D +Y+HR R R G ++FVS
Sbjct: 164 SRGIDFQGVNNVINFDFPLDVTSYIHRAGRTARGNNTGSVLSFVS 298
>19172
Length = 484
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = -1
Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEF---NQVVIFVKSV 297
+F+ + +++ + + H + Q ++EK KL LL + + +IFV++
Sbjct: 484 EFLNNYIQVNIGSLSLSANHNILQIVDVCDESEKIAKLIQLLTQISGENETKTIIFVETK 305
Query: 298 QRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGM 351
+R + + + Q + A AIH Q+ER F++ + ILVAT++ RG+
Sbjct: 304 KRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGL 143
>06438
Length = 989
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 342 VATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAI 388
+ L RG+D VN D P D +TY+HR R RF G A+
Sbjct: 25 LTVTLACRGLDFPAVNWVIQLDCPVDVNTYIHRAGRTARFECNGQAL 165
>33083
Length = 1931
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 349 RGMDIERVNIAFNYDMPEDSDTYLHRVARAGRF-GTKGLAITFVSDE 394
RG+DI +V+ YD P++S Y+HRV R R G+ G A+ + E
Sbjct: 1 RGLDIPQVDWIVQYDPPDESKEYIHRVGRTARGEGSSGKALLLLQPE 141
>12121
Length = 465
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 168 IVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE 203
I + TPGR++ + NL+ + +LDE D+ML+
Sbjct: 463 ICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLD 356
>11423
Length = 1434
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 347 FGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE 394
+GRG +YD P TY+HRV R R G G AI+ + +
Sbjct: 1415 YGRGQR----KYVISYDNPPYIKTYIHRVGRTARAGRAGTAISLLEKK 1284
>02305
Length = 2401
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 45 SGFRDFLLKPELLRAIVDCGFEH 67
SG D LL P L +VDCGF+H
Sbjct: 801 SGHSDSLLSPNL--CLVDCGFQH 863
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|9790083|ref|NP_062659.1| RuvB-like protein 1 [Mus
musculus]
(456 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01279 384 0.0
14389 315 2e-86
23413 178 5e-45
39786 45 5e-12
20270 40 0.002
23766 39 0.003
07243 37 0.021
19129 37 0.023
01642 36 0.025
17843 36 0.025
03022 35 0.074
19561 34 0.14
26408 33 0.23
27434 33 0.26
09184 29 4.3
15498 29 4.6
01586 29 4.8
30094 28 8.7
>01279
Length = 2183
Score = 384 bits (986), Expect(3) = 0.0, Method: Compositional matrix adjust.
Identities = 175/227 (77%), Positives = 209/227 (92%)
Frame = -2
Query: 230 KKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQ 289
+KKE+IQDVTLHDLDVANARPQGGQDI+SMMGQLMKPKKTEITDKLR EINKVVNKYIDQ
Sbjct: 1417 QKKEVIQDVTLHDLDVANARPQGGQDIMSMMGQLMKPKKTEITDKLRKEINKVVNKYIDQ 1238
Query: 290 GVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHG 349
G+AELVPGVLF+DEVHMLDIECFTYLHRALES+IAPIVIFA+NRG C I+GTEDI SPHG
Sbjct: 1237 GIAELVPGVLFIDEVHMLDIECFTYLHRALESTIAPIVIFATNRGKCTIKGTEDIISPHG 1058
Query: 350 IPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQL 409
+P+DLLDRVMI+RT+ Y+ +EM QI++IR+QTE I + EE++ HLG IG +TTLRY+VQL
Sbjct: 1057 MPMDLLDRVMIVRTLPYSQEEMTQILQIRSQTENIQVEEESIQHLGNIGVRTTLRYAVQL 878
Query: 410 LTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 456
LTP ++LA+INGKD++ KE +EEI +LF+DAK+SAKIL +Q+DKY+K
Sbjct: 877 LTPGSILARINGKDNVGKEEIEEIDKLFFDAKASAKILQEQEDKYLK 737
Score = 381 bits (979), Expect(3) = 0.0, Method: Compositional matrix adjust.
Identities = 185/211 (87%), Positives = 201/211 (95%)
Frame = -3
Query: 22 KGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALAL 81
KG+ E+G A Q+++GLVGQE AREA GV+VELIK+KKMAGRAVLLAGPPGTGKTA+AL
Sbjct: 2040 KGIRTCENGYAIQSSAGLVGQEGAREAAGVVVELIKTKKMAGRAVLLAGPPGTGKTAIAL 1861
Query: 82 AIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPC 141
AIAQELG+KVPFCPMVGSEVYS+EIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTP
Sbjct: 1860 AIAQELGNKVPFCPMVGSEVYSSEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPV 1681
Query: 142 ETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVK 201
ETENPMGGYGKT+SHV+IGLKTAKGTKQLKLDPSI+ESLQKE+VE GDVIYIEANSGAVK
Sbjct: 1680 ETENPMGGYGKTVSHVVIGLKTAKGTKQLKLDPSIYESLQKEKVEVGDVIYIEANSGAVK 1501
Query: 202 RQGRCDTYATEFDLEAEEYVPLPKGDVHKKK 232
RQGR D+YATEFDLEAEEYVPLPKGDVHK+K
Sbjct: 1500 RQGRSDSYATEFDLEAEEYVPLPKGDVHKRK 1408
Score = 23.5 bits (49), Expect(3) = 0.0, Method: Compositional matrix adjust.
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2
Query: 1 MKIEEVKSTTK 11
MKIEEVKSTTK
Sbjct: 2101 MKIEEVKSTTK 2069
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1
Query: 11 KTQRIASHSHVKGLGLDESGL 31
K QRIASHSHVKGLGL + G+
Sbjct: 2072 KAQRIASHSHVKGLGLAKMGM 2010
>14389
Length = 790
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 150/167 (89%), Positives = 162/167 (97%)
Frame = +3
Query: 74 TGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEG 133
TGKTA+ALAIAQELG+KVPFCPMVGSEV+S EIKKTEVLMENFRR+IGLRI+ETKEVYEG
Sbjct: 3 TGKTAIALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEG 182
Query: 134 EVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYI 193
EVTELTP ETENPMGGYGKTIS+V+IGLKTAKGTKQLKLDPSIF++LQKE+VE GDVIYI
Sbjct: 183 EVTELTPVETENPMGGYGKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYI 362
Query: 194 EANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240
EANSGAVKRQGR DT+ATEFDLE EEYVPLPKGDVHKKKE+IQDVTL
Sbjct: 363 EANSGAVKRQGRSDTFATEFDLETEEYVPLPKGDVHKKKEVIQDVTL 503
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 82/116 (70%), Gaps = 5/116 (4%)
Frame = +3
Query: 343 DITSPHGIPL---DLLDRVMIIR--TMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEI 397
D+ + +PL D+ + +I+ T+LY+ +M+QIIK+RAQTEG+ + E A + L EI
Sbjct: 423 DLETEEYVPLPKGDVHKKKEVIQDVTLLYSTSDMEQIIKLRAQTEGLQLEENAFSRLSEI 602
Query: 398 GTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDK 453
GT +TLRY+VQLLTPA + K+NG++ I K+ ++++ LF DAK S+K L+++ +K
Sbjct: 603 GTSSTLRYAVQLLTPAYQMCKVNGRNLISKDDIDDVHSLFLDAKRSSKHLSEKNNK 770
>23413
Length = 2343
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 123/170 (72%)
Frame = -3
Query: 286 YIDQGVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDIT 345
+ ++G AE+VPGVLF+DEVHMLDIECF++L+RALE+ +AP++I A+NRG IRGT +
Sbjct: 2341 WREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALETDMAPVLIMATNRGITRIRGTHYM- 2165
Query: 346 SPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRY 405
SPHG+P+DLLDR++II T Y +E+KQI+KIR + E + +S++AL L +IG + +LRY
Sbjct: 2164 SPHGVPIDLLDRLLIISTTPYDEKEIKQILKIRCEEEDVEMSDDALTVLTKIGVEASLRY 1985
Query: 406 SVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455
S+QL+T ANL+ + +E E ++ + LF D S + L + Q +M
Sbjct: 1984 SIQLITAANLVCRKRKGTEVEMEDIKRVYSLFLDESRSTQFLTEYQQAFM 1835
>39786
Length = 467
Score = 44.7 bits (104), Expect(2) = 5e-12, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +3
Query: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQE 43
+K EV+ T+ +RI +HSH++GLGLD+ A+ + G+VGQ+
Sbjct: 144 LKKYEVRDITRIERIGAHSHIRGLGLDDVLEARAVSQGMVGQK 272
Score = 43.9 bits (102), Expect(2) = 5e-12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 42 QENAREACGVIVELIKSKKMAGRAVLLAGPPGT---GKTALALAIAQELGSKVPFCPMVG 98
+++AR A GV+V++++ K R L + K +A+ +AQ LG++ PF M G
Sbjct: 268 KKDARRAAGVVVQMVREGK--NRRTLHSTSRRAEYRKKLPIAVGMAQALGTETPFTSMSG 441
Query: 99 SEVYSTEI 106
SE+YS E+
Sbjct: 442 SEIYSLEM 465
>20270
Length = 542
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = -3
Query: 48 ACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIK 107
AC + L + +K R +LL GPPGTGK+ LA A+A E + F + S++ S +
Sbjct: 423 ACQISPSLHREEK-PWRGILLYGPPGTGKSYLAKAVATEANNST-FFSVSSSDLVSKWLG 250
Query: 108 KTEVLMEN-FRRAIGLRIKETKEVYEGEVTELTPCETEN 145
++E L++ F+ A R + ++ EV L +EN
Sbjct: 249 ESEKLVKTLFQLA---RENQPSIIFIDEVDALCGSRSEN 142
>23766
Length = 1463
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 55 LIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101
L + A + V+L GPPGTGKT LA A+A + + F +VGSE+
Sbjct: 130 LRRDGNQAPKGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 264
>07243
Length = 1112
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVL---MENFRR 118
+ LL GPPGTGKT LA A+A +L + F +V S + I ++ L M N+ R
Sbjct: 310 KGCLLYGPPGTGKTLLARAVASQLDAN--FLKVVSSAIVDKYIGESARLIREMFNYAR 477
>19129
Length = 1020
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101
+ VLL GPPGTGKT LA A+A ++ F + GSE+
Sbjct: 592 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 699
>01642
Length = 1406
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -1
Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100
R VL+ GPPG GKT LA A+A + F +VGSE
Sbjct: 890 RGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 786
>17843
Length = 772
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 63 GRAVLLAGPPGTGKTALALAIAQEL 87
R +LL GPPGTGKT L A+A +L
Sbjct: 184 NRVILLHGPPGTGKTTLCKALAHKL 258
>03022
Length = 2255
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +2
Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRI 124
++L GPPG GKT +A A+A E G + F + G E+ + ++E L E F +A
Sbjct: 1538 IILVGPPGCGKTLVAKAMANEAG--LNFIYIKGPELLDKYVGESERNLREKFDKAQAC-- 1705
Query: 125 KETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTK 168
++ E+ L N GK++++ ++ L G +
Sbjct: 1706 -APCLIFFDEMDTLCSNRQNNDGSNVGKSVTNQLLALMDGCGER 1834
>19561
Length = 474
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = -1
Query: 51 VIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE 110
V EL K+ + LL GPPG GKT LA +A+ G V E+ +++ + E
Sbjct: 417 VSSELDDFKRPVQKVALLCGPPGLGKTTLAHIVAKHAGYNV-------VEMNASDDRSVE 259
Query: 111 VLMENFRRAIGLR 123
V A +R
Sbjct: 258 VFSNKIEAATQMR 220
>26408
Length = 463
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 64 RAVLLAGPPGTGKTALALAIAQE 86
+ VLL GPPGTGKT LA A+A
Sbjct: 367 KGVLLYGPPGTGKTLLARAVAHH 435
>27434
Length = 472
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 51 VIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG 88
+ V +K+ ++ G + GPPG GKT++ +IA LG
Sbjct: 125 LAVRQMKTTQLKGPILCFVGPPGVGKTSIGRSIATTLG 238
>09184
Length = 1242
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 39 LVGQENAREACGVIVELIKSKKMAGRA--VLLAGPPGTGKTALALAIAQELGSK 90
LVG+E G I++ + S G A + ++G PGTGKTA L I + +K
Sbjct: 454 LVGRETE---VGEIMDFMTSHFDRGSAGSLYISGAPGTGKTAALLHIIDDFRTK 302
>15498
Length = 769
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -1
Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKV 91
+++LLAGP G+GK L A+ E+G+ +
Sbjct: 184 KSILLAGPRGSGKKMLVHALCNEVGANL 101
>01586
Length = 1867
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 386 ISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKD---SIEKEHVEEISEL 436
I AL G++GTK +RY +N+ ++ G+D ++ H E + L
Sbjct: 437 IQSAALTSDGKVGTKAYMRYYDNPKEHSNMADQLGGQDGGATVSDHHAESVPRL 598
>30094
Length = 341
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 266 PKKTEITDKLRGEINKVVNKYIDQ 289
P +TE T+ + E+N +V+KY+D+
Sbjct: 11 PAETEYTETINKELNDIVHKYVDK 82
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|23956222|ref|NP_076224.1| ARP3 actin-related protein
3 homolog [Mus musculus]
(418 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00608 613 e-176
19721 208 6e-98
13361 333 6e-92
04742 251 3e-67
39562 210 1e-54
12322 124 7e-29
02757 74 4e-26
36954 93 2e-19
17032 81 6e-16
32273 80 1e-15
01436 75 4e-14
11487 44 2e-11
18926 63 2e-10
28457 32 0.38
>00608
Length = 1930
Score = 613 bits (1581), Expect = e-176, Method: Compositional matrix adjust.
Identities = 299/337 (88%), Positives = 320/337 (94%)
Frame = +3
Query: 82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI 141
I++DWDLMERF EQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI
Sbjct: 3 IIDDWDLMERFYEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI 182
Query: 142 AVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
AVQAVLALAASWTSR VGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT
Sbjct: 183 AVQAVLALAASWTSRNVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 362
Query: 202 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGVNA 261
YFIQQLLR+REVGIPPEQSLETAKA+KER+SYVCPD+ KEF+KYDTD SKW+K+Y G N
Sbjct: 363 YFIQQLLREREVGIPPEQSLETAKAIKERFSYVCPDIAKEFSKYDTDPSKWMKKYEGRNT 542
Query: 262 ISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVL 321
ISK+ FS+DVGYERFLGPEIFFHPEF+NPDFT PIS+VVD+VIQNCPIDVRR LYKNIVL
Sbjct: 543 ISKQLFSVDVGYERFLGPEIFFHPEFSNPDFTMPISDVVDDVIQNCPIDVRRGLYKNIVL 722
Query: 322 SGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGG 381
SGGSTMFRDFGR++QRD+KR VD RLK SEELS GR+KPKPI+VQVITHHMQRYAVWFGG
Sbjct: 723 SGGSTMFRDFGRKIQRDVKRVVDGRLKASEELSQGRIKPKPIEVQVITHHMQRYAVWFGG 902
Query: 382 SMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS 418
SMLASTPEFYQVCHTK DY+E GPSICRHNPVFG M+
Sbjct: 903 SMLASTPEFYQVCHTKADYDEHGPSICRHNPVFGTMA 1013
>19721
Length = 757
Score = 208 bits (529), Expect(2) = 6e-98, Method: Compositional matrix adjust.
Identities = 108/121 (89%), Positives = 114/121 (94%)
Frame = +2
Query: 82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI 141
+VEDWDL ERFMEQ IFKYLRAEPEDHYFLLTEPPLNTPENRE+TAEIMFE+FN+PGLYI
Sbjct: 2 VVEDWDLHERFMEQAIFKYLRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNIPGLYI 181
Query: 142 AVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
AVQAVLALAASWTSR ERTLTGTVIDSGDGVTHVIPV +GYVIGS IKHIPIAGRDIT
Sbjct: 182 AVQAVLALAASWTSRPPNERTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDIT 361
Query: 202 Y 202
+
Sbjct: 362 F 364
Score = 167 bits (424), Expect(2) = 6e-98, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 95/134 (70%)
Frame = +3
Query: 200 ITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGV 259
I++F + IPP+ S+E AK +KERYSYVCPD+ KEF KYD+D KWIK +
Sbjct: 354 ISHFHPAIATGTGTVIPPDMSMEAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKAHKMS 533
Query: 260 NAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNI 319
+ +FS DVGYE+FLGPE+FF PEF N DF IS+VVD VIQ+CPID RRPLY NI
Sbjct: 534 GSSKYPDFSFDVGYEKFLGPEVFFRPEFVNGDFQASISDVVDTVIQSCPIDSRRPLYNNI 713
Query: 320 VLSGGSTMFRDFGR 333
VLSGGS+MF+ R
Sbjct: 714 VLSGGSSMFKHLDR 755
>13361
Length = 1217
Score = 333 bits (855), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 148/186 (79%), Positives = 169/186 (90%)
Frame = +3
Query: 233 YVCPDLVKEFNKYDTDGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFFHPEFANPDF 292
Y+CPD+ KEF KYD++ SKWI+ YTG+N ++K+ F++DVGYERFLGPEIFFHPEF+NPDF
Sbjct: 45 YICPDIAKEFAKYDSEPSKWIRNYTGMNTVTKQAFNVDVGYERFLGPEIFFHPEFSNPDF 224
Query: 293 TQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEE 352
T P+SE+VD VIQNCPIDVRR LY NIVLSGGSTMF+DFGRRLQRD+KR+VD RL++SE
Sbjct: 225 TIPLSEIVDNVIQNCPIDVRRHLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISEN 404
Query: 353 LSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNP 412
LS GR+KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTK YEE GPSICRHNP
Sbjct: 405 LSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYGPSICRHNP 584
Query: 413 VFGVMS 418
VFG M+
Sbjct: 585 VFGTMT 602
>04742
Length = 2111
Score = 251 bits (642), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 214/411 (52%), Gaps = 1/411 (0%)
Frame = +2
Query: 5 LPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGD 64
+ A V+D G+G K G+AG+ P+ + PS VG + VM G+ D ++GD
Sbjct: 107 VAALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGD 262
Query: 65 EAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENR 123
EA K T K+PI HGIV +WD ME+ + LR PE+H LLTE PLN NR
Sbjct: 263 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 442
Query: 124 EYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEG 183
E +IMFE+FN P +Y+A+QAVL+L AS + TG V+DSGDGV H +P+ EG
Sbjct: 443 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVXHTVPIYEG 598
Query: 184 YVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFN 243
Y + I + +AGRD+T ++ ++L +R E + +KE+ YV D +E
Sbjct: 599 YALPHAISRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM- 775
Query: 244 KYDTDGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEV 303
+ S K Y + I +G ERF PE F P F + + E
Sbjct: 776 QTAASSSSLEKSYELPDGQ-----VITIGNERFRCPEAMFQPSFLGME-SAGXHETTYNS 937
Query: 304 IQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPI 363
I C +D+R+ LY N VLSGGSTM+ R+Q+++ L P +
Sbjct: 938 IMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIT----------------ALAPPTM 1069
Query: 364 DVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVF 414
+++I ++Y+VW GGS+LAS F Q+ +K++Y+E GPSI H F
Sbjct: 1070KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV-HRKCF 1219
>39562
Length = 1438
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 174/333 (52%)
Frame = -2
Query: 82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI 141
IV +WD ME+ + LR PE+H LLTE PLN NRE +IMFE+FN P +Y+
Sbjct: 1437 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 1258
Query: 142 AVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
A+QAVL+L AS + TG V+DSGDGVTH +P+ EGY + I + +AGRD+T
Sbjct: 1257 AIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 1102
Query: 202 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGVNA 261
++ ++L +R E + +KE+ YV D +E S K Y +
Sbjct: 1101 DYLMKILTERGYSFTTTAEREIVRDIKEKLDYVALDFEQEMLT-AASSSSLEKSYELPDG 925
Query: 262 ISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVL 321
I +G ERF PE F P F + + I E I C +D+R+ LY N VL
Sbjct: 924 Q-----VITIGNERFRCPEAMFQPSFLGME-SAGIHETTYNSIMKCDVDIRKDLYANTVL 763
Query: 322 SGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGG 381
SGGSTM+ R+Q+++ L P + +++I ++Y+VW GG
Sbjct: 762 SGGSTMYPGIADRMQKEIT----------------ALAPPTMKIKIIAPPERKYSVWIGG 631
Query: 382 SMLASTPEFYQVCHTKKDYEEIGPSICRHNPVF 414
S+LAS F Q+ +K++Y+E GPSI H F
Sbjct: 630 SILASLSTFQQMWISKQEYDESGPSIV-HRKCF 535
>12322
Length = 849
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 119/231 (51%)
Frame = +1
Query: 174 VTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSY 233
VTH +PV EG+ + I + +AGRD+T +++ LLR + + E K +KER Y
Sbjct: 1 VTHAVPVYEGFAMPHSIMRVDVAGRDVTRYLRLLLRKEGMDLHTTAEFEVVKHIKERTCY 180
Query: 234 VCPDLVKEFNKYDTDGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFFHPEFANPDFT 293
+ + +KE DT+ V+ +++VG RF PE+ F P+ +
Sbjct: 181 LSINPLKE-ESVDTEK---------VSYTLPDGNTVEVGPARFRAPELLFRPDLIGEE-C 327
Query: 294 QPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEEL 353
+ I EV+ IQ +D+R+ LY NIVLSGGST+F+ FG RL +LK
Sbjct: 328 EGIHEVLSYSIQKSDVDLRKTLYSNIVLSGGSTLFKGFGDRLLSELK------------- 468
Query: 354 SGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIG 404
+L PK I +++ + Y+ W G S+LAS F ++ +K++Y E G
Sbjct: 469 ---KLAPKDIKIRISAPQERLYSTWIGXSILASLDTFRKMWVSKREYHEEG 612
>02757
Length = 1094
Score = 73.9 bits (180), Expect(3) = 4e-26, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%)
Frame = -2
Query: 188 SCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDT 247
+ I + +AGRD+T ++ ++L +R E +KE+ YV D +E
Sbjct: 994 TAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVXDIKEKLCYVALDFEQEMATA-A 818
Query: 248 DGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNC 307
S K Y + I +G ERF PE F P F + + I E I C
Sbjct: 817 SSSSLEKSYELPDG-----QVITIGNERFRCPESLFQPSFLGME-SAGIHETTYNSIMKC 656
Query: 308 PIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDL 339
+D+R+ LY N VLSGG+TMF R+Q+++
Sbjct: 655 DVDIRKDLYANTVLSGGTTMFPGIADRMQKEI 560
Score = 43.9 bits (102), Expect(3) = 4e-26, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Frame = -3
Query: 363 IDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSI 407
+ ++ I ++Y+VW GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 537 MKIKXIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 403
Score = 38.1 bits (87), Expect(3) = 4e-26, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -1
Query: 164 TGTVIDSGDGVTHVIPVAEGYVI 186
TG V+DSGDGVTH +P+ EGY +
Sbjct: 1067 TGIVLDSGDGVTHTVPIYEGYAL 999
>36954
Length = 892
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 2/226 (0%)
Frame = -1
Query: 7 ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEA 66
A V D G+ + GYAG P+ IP+ + + E + + + I
Sbjct: 805 ALVFDIGSYSFRAGYAGEDTPKAEIPTHVGVMEDIETTMDTDGGDAPPQPEKKYLIDTVY 626
Query: 67 IEKPTYATKWP--IRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENRE 124
++ P ++ G+VEDWD+ E+ ++ + +++E H L++EP NT RE
Sbjct: 625 MKHPRKGMHLNSFLKDGMVEDWDMFEKVIDYAYNRSIKSESCLHPLLMSEPAWNTKAKRE 446
Query: 125 YTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGY 184
EIMFE +N+P ++ +VL+ A+ S T ++DSG T +PV +GY
Sbjct: 445 KLTEIMFEKYNIPAFFLRKNSVLSAFANGRS--------TALILDSGATHTSAVPVYDGY 290
Query: 185 VIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKER 230
V+ I P+AG I L+ ++ + + P + + + V ++
Sbjct: 289 VLTQGIVKSPLAGDFIARECGLLMEEQNIEVVPPYLISSKEVVADK 152
>17032
Length = 2938
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -1
Query: 379 FGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS 418
FGGSMLASTPEFYQVCHTK DY+E GPSICRHNPVFG M+
Sbjct: 2938 FGGSMLASTPEFYQVCHTKADYDEHGPSICRHNPVFGTMA 2819
>32273
Length = 265
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = -2
Query: 73 ATKWPIRHGIVEDWDLMERFMEQVIFK-YLRAEPEDHYFLLTEPPLNTPENREYTAEIMF 131
+ ++P+ HGIV+DW+ MER + + K L+ E+H LLTE PLN NRE AEI F
Sbjct: 258 SIRYPMEHGIVKDWNDMERIWQYIYSKDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 79
Query: 132 ESFNVPGLYIAVQAVLALAAS 152
++FNVP L+I++QAVL+L A+
Sbjct: 78 DTFNVPALFISMQAVLSLYAT 16
>01436
Length = 2563
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 4/213 (1%)
Frame = +3
Query: 200 ITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGV 259
IT ++ +LL R ET + +KE+ Y D+ +E K + + ++ Y
Sbjct: 3 ITRYLIKLLLLRGYAFNHSADFETVRMLKEKLCYTAYDVEQE-QKLALETTVLVEPY--- 170
Query: 260 NAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNI 319
I I VG ERF PE F P N D ++E++ IQ +D+R YK+I
Sbjct: 171 --ILPDGRVIKVGGERFEAPEALFQPHLINVDGVG-VAELLFNTIQAADMDIRPDFYKHI 341
Query: 320 VLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWF 379
VLSGGSTM+ RL+R++K +L L L G + +++ +++ V+
Sbjct: 342 VLSGGSTMYPGLPSRLEREIK-----QLYLERVLXGDTSRLSKFKIRIEDPPRRKHMVFL 506
Query: 380 GGSMLAST----PEFYQVCHTKKDYEEIGPSIC 408
GGS+ A +F+ + + +YEE+G +
Sbjct: 507 GGSVXADIMKDKDDFWMM---RSEYEEMGVKVL 596
>11487
Length = 771
Score = 43.5 bits (101), Expect(2) = 2e-11, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 304 IQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRD 338
I C +D+R+ LY N VLSGG+TMF R+Q++
Sbjct: 753 IMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKE 649
Score = 42.7 bits (99), Expect(2) = 2e-11, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = -2
Query: 373 QRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSI 407
++Y+VW GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 596 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 492
>18926
Length = 478
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Frame = +1
Query: 285 PEFANPDFTQ--PISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRT 342
P NP T + VV + C ID+R LY ++ GG+++ + F RL RDL
Sbjct: 61 PSSRNPKATPVLGVGHVVTTSVGMCDIDIRPSLYGGVIAVGGNSLIQGFTERLNRDLSNK 240
Query: 343 VDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEE 402
++L + + +R++ W GGS+LAS F Q+ +K++YEE
Sbjct: 241 TPPSMRLK-------------IIAAASTAERRFSSWIGGSILASLGSFQQMWVSKQEYEE 381
Query: 403 IGPS 406
G S
Sbjct: 382 GGKS 393
>28457
Length = 926
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -2
Query: 271 VGYERF--LGPEIFFHPEFANPDFTQPISEVVDEVIQNC 307
VGY R + P +FF P F+ P FT S++ ++V++ C
Sbjct: 925 VGYLRHVPISPSLFFRPSFSXPLFTASSSKLREKVLEIC 809
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|28478945|ref|XP_129846.3| PREDICTED: glutaminase
isoform 1 [Mus musculus]
(674 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05396 614 e-176
26615 31 1.7
>05396
Length = 1865
Score = 614 bits (1583), Expect = e-176, Method: Compositional matrix adjust.
Identities = 285/513 (55%), Positives = 381/513 (74%), Gaps = 3/513 (0%)
Frame = +3
Query: 144 LEDLLFYTIAEGQEKIPVHKFITALKSTGLRTSDPRLKECMDMLRLTLQTTSDG---VML 200
+E +F +++ K+ ++KF+ ALK TGLR SDPRL E M L ++ + DG V L
Sbjct: 33 VEGAIFDYLSDSDGKLSLNKFLGALKETGLRVSDPRLAESMRNLGNSITSEFDGATNVTL 212
Query: 201 DKDLFKKCVQSNIVLLTQAFRRKFVIPDFMSFTSHIDELYESAKKQSGGKVADYIPQLAK 260
D+ FK CV NIVL+ +AFRR+F++P+F F HIDELY +AK + G++A YIPQLA+
Sbjct: 213 DRHTFKSCVTDNIVLIARAFRRQFIVPEFQEFCRHIDELYWNAKPLTEGQLATYIPQLAR 392
Query: 261 FSPDLWGVSVCTVDGQRHSIGDTKVPFCLQSCVKPLKYAIAVNDLGTEYVHRYVGKEPSG 320
+PD WG+SVCTVDGQR+S+GD +PFCLQS KPL YA+A+ND+ + VH+YVG+EPSG
Sbjct: 393 INPDYWGLSVCTVDGQRYSLGDANIPFCLQSISKPLTYALALNDVEPDVVHQYVGQEPSG 572
Query: 321 LRFNKLFLNEDDKPHNPMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSN 380
RFN + LN +KPHNPMVNAGAIV+TS++K +N +++FDY +++ ++AG+E+V F+N
Sbjct: 573 QRFNDIGLNMYNKPHNPMVNAGAIVMTSVVKPELNLSDRFDYALRYFKRLAGDEFVSFNN 752
Query: 381 ATFQSERESGDRNFAIGYYLKEKKCFPEGTDMVGILDFYFQLCSIEVTCESASVMAATLA 440
+ F SER++ DRNFAI YYLKE +CFP+GT+++ +LDFYFQLCS+E+TC+S +V AATLA
Sbjct: 753 SVFLSERDTADRNFAIAYYLKENQCFPKGTNIMEVLDFYFQLCSVEMTCDSGAVAAATLA 932
Query: 441 NGGFCPITGERVLSPEAVRNTLSLMHSCGMYDFSGQFAFHVGLPAKSGVAGGILLVVPNV 500
NGG CPIT ++VL P +R+TLSLM SCGMYD+SGQFAF VGLP KSGVAGGI+LVVPNV
Sbjct: 933 NGGICPITDDKVLEPFCIRDTLSLMLSCGMYDYSGQFAFKVGLPGKSGVAGGIMLVVPNV 1112
Query: 501 MGMMCWSPPLDKMGNSVKGIHFCHDLVSLCNFHNYDNLRHFAKKLDPRREGGDQRVKSVI 560
MG+M WSPPLD GNS++GI FC DLV NFHN+DN+R +KLDP + + ++
Sbjct: 1113MGIMMWSPPLDGYGNSMRGIKFCKDLVHSFNFHNFDNIRFTTRKLDPCVRHMELQANRIV 1292
Query: 561 NLLFAAYTGDVSALRRFALSAMDMEQRDYDSRTXXXXXXXXXXXXXXKFLLEACKVNPFP 620
+LLF+AY GDV+A+RR ALS MDM Q DYD RT +FLL+ CK +PF
Sbjct: 1293DLLFSAYNGDVTAIRRCALSGMDMSQPDYDGRTALHVASAEGQLQVVEFLLDRCKCSPFL 1472
Query: 621 KDRWNNTPMDEALHFGHHDVFKILQEYQVQYTP 653
DRW TP+D+A+ F H+ ++L+E +Q P
Sbjct: 1473VDRWGFTPLDDAVRFEKHEAAELLKERMMQENP 1571
>26615
Length = 973
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 PHNPMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNE--YVGFSNAT 382
P + A ++V TSL +G++ + YVMQFLN + Y F +AT
Sbjct: 256 PVHTTTAAPSMVSTSLXSRGISWINAYFYVMQFLNLTDSDRVNYTDFVSAT 408
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|27754103|ref|NP_080235.2| proteasome 26S ATPase
subunit 6 [Mus musculus]
(389 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07243 609 e-175
07247 400 e-132
19129 283 6e-77
01642 260 9e-76
23766 236 2e-62
02582 173 9e-44
03022 157 8e-39
12235 138 3e-33
00810 129 2e-30
20270 108 3e-24
38672 82 7e-22
25671 82 4e-16
26408 74 7e-14
02194 66 2e-11
17843 55 6e-08
06766 51 1e-06
26887 45 7e-05
14413 42 4e-04
27434 37 0.012
37695 35 0.037
01279 35 0.047
19561 35 0.062
24645 28 7.0
>07243
Length = 1112
Score = 609 bits (1571), Expect = e-175, Method: Compositional matrix adjust.
Identities = 295/325 (90%), Positives = 311/325 (95%)
Frame = +1
Query: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
TE+KFIVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMSH
Sbjct: 1 TEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSH 180
Query: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
EDPG+V+YS IGGL+EQIRELREVIELPL NPELF RVGI PPKGCLLYGPPGTGKTLLA
Sbjct: 181 EDPGDVTYSAIGGLTEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLA 360
Query: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
RAVASQLD NFLKVVSS+IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS
Sbjct: 361 RAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 540
Query: 245 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304
EGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LP
Sbjct: 541 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 720
Query: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQ 364
NEQARL+ILKIHA I KHGEIDYEAIVKLSD FNGADLRNVCTEAG+FAIRA+ ++V+Q
Sbjct: 721 NEQARLEILKIHALIIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQ 900
Query: 365 EDFMKAVRKVADSKKLESKLDYKPV 389
EDFMKAVRKV+D+KKLESKLDYKPV
Sbjct: 901 EDFMKAVRKVSDNKKLESKLDYKPV 975
>07247
Length = 1753
Score = 400 bits (1029), Expect(2) = e-132, Method: Compositional matrix adjust.
Identities = 191/214 (89%), Positives = 205/214 (95%)
Frame = -2
Query: 176 PGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEI 235
PGTGKTLLARAVASQLDCNFLKVVSS+IVDKYIGESARLIREMF +ARDH+PCIIFMDEI
Sbjct: 1407 PGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARLIREMFAFARDHEPCIIFMDEI 1228
Query: 236 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRL 295
DAIGGRRFSEGTSADREIQRTLMELLNQMDGFD L +VKMIMATNRPDTLDPALLRPGRL
Sbjct: 1227 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRL 1048
Query: 296 DRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355
DRKI I LPNEQARL+ILKIHA PI KHGEID+EA+VKLS+ FNGADLRNVCTEAGMFAI
Sbjct: 1047 DRKIEISLPNEQARLEILKIHANPIAKHGEIDWEAVVKLSEDFNGADLRNVCTEAGMFAI 868
Query: 356 RADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV 389
RA+ D+V++EDFMKAVRKV+D+KKLESKLDYKPV
Sbjct: 867 RAERDYVIEEDFMKAVRKVSDNKKLESKLDYKPV 766
Score = 89.0 bits (219), Expect(2) = e-132, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = -1
Query: 115 VDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGI 164
+DPLVYNMS EDPG++++++IGGL EQ+RELREVIELPL NPELFQRVGI
Sbjct: 1588 MDPLVYNMSVEDPGDITFNQIGGLGEQVRELREVIELPLLNPELFQRVGI 1439
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 156 PELFQRVGIIPPKGCLLYGPP 176
P G PPKGCLL+GPP
Sbjct: 1466 PRAVPACGHHPPKGCLLFGPP 1404
>19129
Length = 1020
Score = 283 bits (725), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/265 (52%), Positives = 187/265 (70%)
Frame = +1
Query: 46 DLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTL 105
+L+ LQ G VGEV+K + ++K +VK ++VV + +D + + P RVAL +
Sbjct: 226 ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDMNSVTPNCRVALRNDSY 405
Query: 106 TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGII 165
+ + LP +VDPLV M E + +Y +GGL +QI+E++EVIELP+ +PELF+ +GI
Sbjct: 406 VLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIA 585
Query: 166 PPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDH 225
PKG LLYGPPGTGKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR+H
Sbjct: 586 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREH 765
Query: 226 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTL 285
P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+ +K+IMATNR D L
Sbjct: 766 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEPKQNIKVIMATNRIDIL 945
Query: 286 DPALLRPGRLDRKIHIDLPNEQARL 310
D ALLRPGR+DRKI PNE+ARL
Sbjct: 946 DSALLRPGRIDRKIEFPPPNEEARL 1020
>01642
Length = 1406
Score = 260 bits (665), Expect(2) = 9e-76, Method: Compositional matrix adjust.
Identities = 129/255 (50%), Positives = 176/255 (69%)
Frame = -1
Query: 132 YSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
YS+IGG+ Q +E+RE +ELPLT+ EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 998 YSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 819
Query: 192 DCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADR 251
F++VV S V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADR
Sbjct: 818 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 639
Query: 252 EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLD 311
E+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI LP+ + +
Sbjct: 638 EVQRILLELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 459
Query: 312 ILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAV 371
I G + E+D E V D +GAD+ +C EAGM A+R + V+ +DF K
Sbjct: 458 IFSTITGKMNISEEVDLEDYVARPDKISGADINAICQEAGMQAVRENRYVVLAKDFEKGY 279
Query: 372 RKVADSKKLESKLDY 386
+ + KK E++ ++
Sbjct: 278 KN--NIKKDETEHEF 240
Score = 41.6 bits (96), Expect(2) = 9e-76, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = -2
Query: 40 YEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVA 99
Y ++ ++K +QSV ++G+ L+ + + IV +T G Y V +D+ LKP + VA
Sbjct: 1276 YLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSSSVA 1097
Query: 100 LDMTTLTIMRYLP 112
L + ++ LP
Sbjct: 1096 LHKHSNALVDVLP 1058
>23766
Length = 1463
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 164/255 (64%)
Frame = +1
Query: 120 YNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTG 179
+ H DPGN + IR + + + +R G PKG +LYGPPGTG
Sbjct: 61 WWTGHPDPGN----------QGIR*A------AIDSSRVLRRDGNQAPKGVILYGPPGTG 192
Query: 180 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 239
KTLLA+AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G
Sbjct: 193 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVG 372
Query: 240 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
+R+ + +REIQRT++ELLNQ+DGFD+ VK+IMATNR +TLDPAL+RPGR+DRKI
Sbjct: 373 TKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 552
Query: 300 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
LP+E+ + I IH +T G+++ + V D +GAD++ +CTEAG+ A+R
Sbjct: 553 EFPLPDEKTKRRIFTIHTSRMTLAGDVNIDDYVMSKDDLSGADIKAICTEAGLLALRERR 732
Query: 360 DFVVQEDFMKAVRKV 374
V EDF KA V
Sbjct: 733 MKVRNEDFAKAKENV 777
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 29/34 (85%)
Frame = +2
Query: 131 SYSEIGGLSEQIRELREVIELPLTNPELFQRVGI 164
+Y++IGGL QI+E++E +ELPLT+PE ++ +GI
Sbjct: 47 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGI 148
>02582
Length = 1101
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 171/326 (52%), Gaps = 39/326 (11%)
Frame = +3
Query: 96 TRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 155
TR ++ LT + R VD +V D +V +++IGGL ++R+ +E PL
Sbjct: 48 TRADMEAALLTFKPSMQRGVDCIV------DARSVPWTDIGGLDLVKLQIRQAVEWPLLY 209
Query: 156 PELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLI 215
P+ FQ +G+ KG LLYGPPG GKT LA+A A+ FL + + + Y+G++ + I
Sbjct: 210 PDTFQALGLPLTKGVLLYGPPGCGKTTLAQAAATACHVTFLSLSCAQLYSPYVGDAEKKI 389
Query: 216 REMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT------ 269
E F AR P I+F+DE+DAI G+R S+ + +R L LLN+MDG
Sbjct: 390 SETFQKARALAPSILFLDEMDAIVGKR-SDSSLGSGVSERVLSALLNEMDGIGVRLDDKS 566
Query: 270 ------------------LHRVK--------MIMATNRPDTLDPALLRPGRLDRKIHIDL 303
H VK ++ ATNRPD LDPALLRPGR+DR I++
Sbjct: 567 DSREMEIEGSSDHTPQVRQHAVKEAHDRHVLVVAATNRPDMLDPALLRPGRMDRLIYVPP 746
Query: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR--ADHDF 361
P+ Q RL IH + ++D + + L+ G+ GAD++ +C E G+ A++ +
Sbjct: 747 PDVQGRLQSFTIHTRKMPLGKDVDVKQLADLTAGYTGADIKTLCNEVGLLALKESMSAEC 926
Query: 362 VVQEDFMKAVRK-----VADSKKLES 382
V Q+ F+ A++ ADS ++E+
Sbjct: 927 VNQDHFLNAIKTRKPSLSADSSEVET 1004
>03022
Length = 2255
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 138/231 (59%), Gaps = 3/231 (1%)
Frame = +2
Query: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
++ ++G LS +L++ I + +PE+ G+ G +L GPPG GKTL+A+A+A
Sbjct: 1415 TTTWEDVGALSNVRAQLKDSILCRIHDPEVSSAFGLPTNSGIILVGPPGCGKTLVAKAMA 1594
Query: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI-GGRRFSEGT 247
++ NF+ + ++DKY+GES R +RE F+ A+ PC+IF DE+D + R+ ++G+
Sbjct: 1595 NEAGLNFIYIKGPELLDKYVGESERNLREKFDKAQACAPCLIFFDEMDTLCSNRQNNDGS 1774
Query: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
+ + + L+ L MDG +V ++ ATN + +DPAL RPGR DRKI I LP+
Sbjct: 1775 NVGKSVTNQLLAL---MDGCGERSQVYVMGATNIIENVDPALQRPGRFDRKIFIGLPDTD 1945
Query: 308 ARLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
RLDIL+ G K D + + + ++GF+GADL+++ EA A++
Sbjct: 1946 GRLDILRALTKGGSQRKLESCDMQQLAQDTEGFSGADLKHLVNEASTIALK 2098
Score = 58.5 bits (140), Expect(2) = 6e-12, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Frame = +1
Query: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGC---LLYGPPGTGKTLLAR 185
+ + GG ++ + EL E L + + Q K C LLYGP G+GK LA
Sbjct: 517 TATLDDFGGSNKLLAELDSDFEEILYS-DYCQYASACDQKACRRYLLYGPRGSGKRFLAE 693
Query: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
+A QL LK ++++ G+S + +R++F+ A PC++++++I+ + R+
Sbjct: 694 CIAGQLKLPLLKPKINTLISGVSGDSEQRVRDLFDQAVSQAPCVLYLEDIECLAPRQ 864
Score = 29.6 bits (65), Expect(2) = 6e-12, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 44/101 (43%)
Frame = +2
Query: 273 VKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIV 332
V ++ T+R + + L PGR K + +P+E +R +L+ T + + +
Sbjct: 956 VVVVATTSRIEAVHRDLRIPGRFMEKA-LGMPDEGSREGLLQRLCSRYTLSPHLKLKTLA 1132
Query: 333 KLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRK 373
+L+ GF DLR + A A R + E + R+
Sbjct: 1133 RLTPGFVAGDLRALVHGAFSTAFRRVRNLYRTESAESSTRR 1255
>12235
Length = 1749
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 109/182 (59%), Gaps = 2/182 (1%)
Frame = +1
Query: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 254
F+ V S ++ ++G +R+MF AR + PCI+F+DEIDA+G +R E +
Sbjct: 16 FITVSGSEFLEMFVGVGPSRVRDMFATARKNAPCILFVDEIDAVGRKRSGRNFGGQSEQE 195
Query: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314
TL +LL +MDGF+T V ++ ATNR D LD ALLRPGR DR+I + LP+ + R I K
Sbjct: 196 NTLNQLLVEMDGFNTQTGVVVLAATNRVDILDAALLRPGRFDRQIFVPLPDIKXRASIFK 375
Query: 315 IHAGPI-TKHGEIDY-EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVR 372
+H P+ T+ + D + L+ GF+GAD+ NVC EA + A R + + F +A+
Sbjct: 376 VHLDPLKTEVNKNDLARKMAALTPGFSGADIANVCNEAALIAARDLNTSIHMTHFEQAIE 555
Query: 373 KV 374
+V
Sbjct: 556 RV 561
>00810
Length = 1431
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 128/231 (55%), Gaps = 3/231 (1%)
Frame = -3
Query: 138 LSEQIRELREVIELPLTNPELFQRVGII-PPKGCLLYGPPGTGKTLLARAVASQLDCNFL 196
L + I++++E + LP +LF+ ++ PPKG LL+GPPG GKT++A+A A F+
Sbjct: 1429 LEDVIQDVKETVILPFKRADLFRHSSLLQPPKGVLLHGPPGCGKTMIAKATAKAAGARFI 1250
Query: 197 KVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 256
+ SS+VDK+ GES + +F+ A QP IIF+DEID+ R S A I+
Sbjct: 1249 NLQVSSLVDKWYGESQKRAEAVFSLAIKLQPTIIFIDEIDSFLRSRTSTDHEATAMIKTQ 1070
Query: 257 LMELLNQMDGF--DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314
M DG D RV ++ ATNRP +D A+LR R+ HI LP R I
Sbjct: 1069 FMSF---WDGLMTDPDCRVMVMGATNRPQDVDAAILR--RMPSMFHIGLPGPAQRRSIFN 905
Query: 315 IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQE 365
+ + ++Y+ + +++DGF+G+D+R VC A A+ H+F+ +E
Sbjct: 904 LILSK-ERIDALNYDELAEMTDGFSGSDIREVCRAA---AVATVHEFIQEE 764
>20270
Length = 542
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Frame = -3
Query: 166 PPKGCLLYGPPGTGKTLLARAVASQLD-CNFLKVVSSSIVDKYIGESARLIREMFNYARD 224
P +G LLYGPPGTGK+ LA+AVA++ + F V SS +V K++GES +L++ +F AR+
Sbjct: 384 PWRGILLYGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGESEKLVKTLFQLARE 205
Query: 225 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM-ATNRPD 283
+QP IIF+DE+DA+ G R + + R I+ E L QM G + +++ ATN P
Sbjct: 204 NQPSIIFIDEVDALCGSRSENESESARRIK---TEFLVQMQGVGNDNTGVLVLGATNIPW 34
Query: 284 TLDPALLR 291
TLD A+ R
Sbjct: 33 TLDSAIRR 10
>38672
Length = 730
Score = 82.4 bits (202), Expect(2) = 7e-22, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%)
Frame = -3
Query: 254 QRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
+R + +LL MDG V ++ ATNRP+++D AL R GR DR++ I +P+ RL+IL
Sbjct: 587 RRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDAALRRFGRFDREVDIGIPDATGRLEIL 408
Query: 314 KIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
+IH + ++D E + + G GAD+ +C+EA + IR D + ED
Sbjct: 407 RIHTKNMKLADDVDLEQVASETHGHVGADVAALCSEAALQQIREKMDLIDLED 249
Score = 39.3 bits (90), Expect(2) = 7e-22, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -1
Query: 203 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
I+ K GES +R+ F A + P IIF+DE+DAI +R
Sbjct: 730 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR 611
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -3
Query: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
NVS+ ++GGL +EL+E+++ P+ +PE F + G+ P KG L
Sbjct: 134 NVSWEDVGGLENVKKELQELVQYPVEHPEKFLKFGMTPSKGVLF 3
>25671
Length = 441
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Frame = +2
Query: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA 237
TGKT+LA+AVA++ F V +SS+ +KY GES +L+R +F A + P IF+DEID+
Sbjct: 2 TGKTMLAKAVATECGTTFFNVSTSSLANKYRGESEKLVRLLFEMAHFYAPSTIFIDEIDS 181
Query: 238 IGGRRFSEGTSADREIQRTL-MELLNQMDGF-----DTLHRVKMIMATNRPDTLDPALLR 291
I +R G+ ++ E R + ELL QMDG D V ++ ATN P
Sbjct: 182 ICSKR---GSDSEHEASRRVKSELLVQMDGVGVTNDDPSKAVMVLAATNFP--------- 325
Query: 292 PGRLDRKIHIDLPNEQARLDILKIHAGPITKHGE 325
L + ++ P + L + GP G+
Sbjct: 326 ---LGHRRGLEAPPGETHLHPTALSGGPACAAGD 418
>26408
Length = 463
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Frame = +1
Query: 46 DLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTL 105
+L+ LQ G VGEV+K + ++K +VK ++VV D + R +
Sbjct: 1 ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVV------DFGQEY*YKRCYAQLPCR 162
Query: 106 TIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQI------------RELREVIELPL 153
T R L D + G+ S+ + G S + + ++EVIELP+
Sbjct: 163 TAQRKLHTTQD------LAKQSGSASFVDDGRKSARFNIRNGWWLG*ANQRIKEVIELPV 324
Query: 154 TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQ 190
+PELF +GI PKG LLYGPPGTGKTLLARAVA
Sbjct: 325 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 435
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%)
Frame = +2
Query: 60 VLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLV 119
+L Q T + ++K + + +D + + P RVAL + T+ + LP +VDPLV
Sbjct: 44 LLSQWTRRRCLLKFIRKASSLSILDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 223
Query: 120 YNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTG 179
M E + +Y +GGL +QI+E R P + P ++ + P
Sbjct: 224 SLMMVEKVPDSTYEMVGGLDKQIKESRR*SNCPSSIPNCSMPWALLSQRVYCCTVRPVLA 403
Query: 180 KTLLARAVASQLDCNFLKV 198
K L + +C F++V
Sbjct: 404 KRCLPVRLPITPECTFIRV 460
>02194
Length = 1891
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Frame = -1
Query: 154 TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESAR 213
T P + GI +G LLYGPPG GK+ A+A LD N + ++ +K G S
Sbjct: 1537 TAPRWYMDRGIPYRRGYLLYGPPGCGKSSYIMALAGALDYN---ICVLNLSEK--GLSDD 1373
Query: 214 LIREMFNYARDHQPCIIFMDEIDAIGGRR--FSEGTSADREIQR-TLMELLNQMDGFDTL 270
+ + A + II ++++DA R E + + + R T LLN +DG +
Sbjct: 1372 RLNHLLTVAPEQS--IILLEDVDAAFLSRDLSKENPAMYQGMGRLTFSGLLNALDGVASA 1199
Query: 271 HRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
+ M TN D LDPAL+RPGR+D K +D
Sbjct: 1198 EARIVFMTTNYLDRLDPALIRPGRVDMKELVD 1103
>17843
Length = 772
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Frame = +1
Query: 171 LLYGPPGTGKTLLARAVASQL--------DC-NFLKVVSSSIVDKYIGESARLIREMFNY 221
LL+GPPGTGKT L +A+A +L C +++ S S+ K+ ES +L+ +MF
Sbjct: 196 LLHGPPGTGKTTLCKALAHKLCIRLSHRFSCGQLVEINSHSLFSKWFSESGKLVTKMFQR 375
Query: 222 ARDHQP-----CIIFMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVK 274
D+ + +DE++++ R S G I R + +L Q+D
Sbjct: 376 LHDYMVDPELLVCVLIDEVESLTAARKSCLNGNEPSDAI-RVVNAVLTQIDQLKKFANCL 552
Query: 275 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
++ +N +D A + R D K +I P A
Sbjct: 553 ILTTSNITGAIDLAFV--DRADIKQYIGPPTPPA 648
>06766
Length = 976
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 294 RLDRKIHIDLPNEQARLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAG 351
RLD+ I+I LP++++R ILK + P+ K E+D I K++ GF+GADL +C A
Sbjct: 2 RLDQLIYIPLPDDKSREAILKANLRKSPLAK--EVDLTYIAKVTQGFSGADLTEICQRAC 175
Query: 352 MFAIR 356
AIR
Sbjct: 176 KLAIR 190
>26887
Length = 410
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = -3
Query: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMAT 279
R+ + +REIQRT++ELLNQ+DGFD+ VK+ + T
Sbjct: 168 RYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVHLXT 55
>14413
Length = 826
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Frame = +2
Query: 180 KTLLARAVASQLD---------CNFLKVVSSSIVDKYIGESARLIREMFN----YARDHQ 226
KT L +A+A +L + +++ S S+ K+ ES +L+ +F A D
Sbjct: 2 KTSLCKALAEKLAIRTQNSFAYTHLVEINSHSLFSKWFSESGKLVARLFGKIGELATDKN 181
Query: 227 PCI-IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTL 285
+ + +DE++++ R + ++ R+ R + +L Q+D V ++ +N ++
Sbjct: 182 NLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDEIKACPNVLILATSNLAQSI 361
Query: 286 DPALLRPGRLDRKIHIDLPNEQARLDILK 314
D A L R D + I LP+ A I K
Sbjct: 362 DLAFL--DRADIRQFIGLPDPLAISSIYK 442
>27434
Length = 472
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Frame = +2
Query: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK---------YIGESARLIREMFNYA 222
GPPG GKT + R++A+ L F ++ + D+ YIG I + A
Sbjct: 176 FVGPPGVGKTSIGRSIATTLGREFHRIALGGVCDQSDIRGHRRTYIGSMPGRIIQGLKSA 355
Query: 223 RDHQPCIIFMDEIDAI 238
+ P + +DEID +
Sbjct: 356 GTNNP-VFPLDEIDKL 400
>37695
Length = 156
Score = 35.4 bits (80), Expect = 0.037, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 347 CTEAGMFAIRADHDFVVQEDFMKAV 371
CTEAGMFAIRA ++DF+ AV
Sbjct: 9 CTEAGMFAIRARRKMATEKDFLDAV 83
>01279
Length = 2183
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 7/170 (4%)
Frame = -3
Query: 168 KGCLLYGPPGTGKTLLARAVASQLDCN--FLKVVSSSIVDKYIGESARLIREMFNYARDH 225
+ LL GPPGTGKT +A A+A +L F +V S + I ++ L M N+ R
Sbjct: 1914 RAVLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEVYSSEIKKTEVL---MENFRR-- 1750
Query: 226 QPCIIFMDEIDAIGGRRFSEGTSADREI-QRTLMELLNQMDGFD-TLHRVKMIMATNRPD 283
AIG R + E+ + T +E N M G+ T+ V + + T +
Sbjct: 1749 -----------AIGLRIKETKEVYEGEVTELTPVETENPMGGYGKTVSHVVIGLKTAKGT 1603
Query: 284 TLDPALLRPGRLDRKIHIDLPNEQARL-DILKIHA--GPITKHGEIDYEA 330
+ +LD I+ L E+ + D++ I A G + + G D A
Sbjct: 1602 -------KQLKLDPSIYESLQKEKVEVGDVIYIEANSGAVKRQGRSDSYA 1474
>19561
Length = 474
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = -1
Query: 168 KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSS-----SIVDKYIGESARLIREMFNYA 222
K LL GPPG GKT LA VA N +++ +S + I E+A +R +
Sbjct: 378 KVALLCGPPGLGKTTLAHIVAKHAGYNVVEMNASDDRSVEVFSNKI-EAATQMRAVMGA- 205
Query: 223 RDHQPCIIFMDEIDA 237
D +P + +DEID
Sbjct: 204 -DPRPNCLIIDEIDG 163
>24645
Length = 1071
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 348 TEAGMFAIRADHDFVVQEDFMKAVRKVADS 377
T+ +FA +A HD V ED + +R +AD+
Sbjct: 392 TKLLLFAAQASHDLVPPEDMEQVLRTIADN 303
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6753320|ref|NP_033966.1| chaperonin containing Tcp1,
subunit 3 (gamma) [Mus musculus]
(545 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29631 284 e-175
01159 290 9e-79
05356 113 5e-48
09900 165 5e-41
29864 143 2e-34
17249 141 6e-34
06409 140 1e-33
12796 132 3e-31
33770 110 1e-24
02673 55 5e-08
30661 55 6e-08
12205 32 0.60
12323 32 0.74
12624 29 5.5
00104 28 9.7
>29631
Length = 1257
Score = 284 bits (727), Expect(3) = e-175, Method: Compositional matrix adjust.
Identities = 129/199 (64%), Positives = 169/199 (84%)
Frame = +1
Query: 158 SSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRG 217
S + TK IS+W LAC IALDA TV EENGRKEIDIK+YA+VEKIPGG +E+S VL+G
Sbjct: 460 SCLGTKFISKWMDLACQIALDATTTVFMEENGRKEIDIKRYAKVEKIPGGTMEESEVLKG 639
Query: 218 VMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQ 277
+ +NKDV H +M+R I+NPRI+LLD +LEYKKGES T+IEI++EEDF +ILQ+EEEYI +
Sbjct: 640 IXVNKDVVHXKMKRRIENPRIMLLDCNLEYKKGESATNIEISKEEDFAKILQLEEEYIRK 819
Query: 278 LCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEE 337
+C++II LKPD+VITEKG+SDLAQH+L++A ++ +RRVRKTDNNRIARACGA I +R +E
Sbjct: 820 MCDEIIALKPDLVITEKGVSDLAQHFLLKAGISVLRRVRKTDNNRIARACGATIANRTDE 999
Query: 338 LREDDVGTGAGLLEIKKIG 356
L+E+D+G+G GLL+ ++
Sbjct: 1000LKEEDMGSGCGLLKCARLA 1056
Score = 243 bits (620), Expect(3) = e-175, Method: Compositional matrix adjust.
Identities = 115/151 (76%), Positives = 136/151 (90%), Gaps = 1/151 (0%)
Frame = +3
Query: 7 VLVLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAI 66
++VL+QNT+RESGRKVQ GNI A KTIAD+IRTCLGPKSM+KML+DPMGGIVMTNDGNAI
Sbjct: 3 IIVLNQNTRRESGRKVQLGNIAAGKTIADVIRTCLGPKSMLKMLMDPMGGIVMTNDGNAI 182
Query: 67 LREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAY 126
LREI VQHPAAKSMIE++RTQDEE GDGT SVIILAGE+LSVAE FLEQQMHPTV+I+AY
Sbjct: 183 LREINVQHPAAKSMIEVARTQDEETGDGTKSVIILAGEVLSVAEQFLEQQMHPTVIIAAY 362
Query: 127 RMALDDMISTLK-KISTPVDVNNREMMLSII 156
R AL+D + L+ KI TP+D+++R ML+I+
Sbjct: 363 RQALEDTLEVLRTKICTPIDISDRNQMLNIV 455
Score = 128 bits (322), Expect(3) = e-175, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 66/74 (89%)
Frame = +3
Query: 350 LEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVP 409
LE++KIGD+YFTF+ DCK PKACTILLRGASK+IL+EVERNLQDAM V RNV++DP L P
Sbjct: 1035 LEVRKIGDDYFTFLVDCKSPKACTILLRGASKDILAEVERNLQDAMNVARNVMIDPHLCP 1214
Query: 410 GGGASEMAVAHALT 423
GGGASEMA+A AL
Sbjct: 1215 GGGASEMALAQALN 1256
>01159
Length = 2613
Score = 290 bits (742), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 305/524 (58%), Gaps = 6/524 (1%)
Frame = +3
Query: 5 RPVLVLSQNTK--RESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 62
RP ++L K R +G + +I AAK++A I++T LGPK + KM++ G + +TND
Sbjct: 132 RPFIILRDQDKKSRLTGIEAHKSHILAAKSVASILKTSLGPKGLDKMMVSGDGDVTVTND 311
Query: 63 GNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVV 122
G IL + V H AK M+++S++QD+E+GDGTT V++LAG +L AE L++ +HP +
Sbjct: 312 GATILDMMDVDHQIAKLMVQLSKSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRI 491
Query: 123 ISAYRMALDDMISTLKKIS--TPVDVNNREMMLSIINSSITTKVISRWSSLACNIALDAV 180
Y +A + TL KIS VD+ N E ++ + +++ +K+++R IA+DA+
Sbjct: 492 ADGYEIAAKCAVETLDKISDNYEVDLKNAEPLIKLAMTTLGSKIVNRCHRQMAKIAVDAI 671
Query: 181 KTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVL 240
+V + RK++D + +VE GG +ED+ +++GV+++KD++HP+M + +K+ +I +
Sbjct: 672 MSVA--DLKRKDVDF-ELIKVEGKVGGKLEDTMLVKGVVVDKDMSHPQMPKVVKDAKIAI 842
Query: 241 LDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLA 300
L E K +++ ++IT ED+ ++ + E + + + ++VI + G D A
Sbjct: 843 LTCPFEPPKPKTKHKLDITSVEDYKKLREYELNKFESMVQSVKDKGANLVICQWGFDDEA 1022
Query: 301 QHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIG--DE 358
H L++ + A+R V + IA A G RIV R EEL + +G AG++ G +
Sbjct: 1023NHLLLQRELPAVRWVGGPEIELIAIATGGRIVPRFEELTTEKLGK-AGIVRELTFGTTKD 1199
Query: 359 YFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAV 418
I +C + +A TI +RG +K I+ E +R+L DA+ V RN++ D ++V GGGA E+A
Sbjct: 1200RMLVIEECLNTRAVTIFIRGGNKMIVEEAKRSLHDALCVIRNLVRDNRVVYGGGAPEIAA 1379
Query: 419 AHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQESCETW 478
+ A+ E + ++ +EQ+ R+ ++ALE +P L +N G + I+ L ++++ +E
Sbjct: 1380SVAVAEAADKISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKSRQVKEKNPRL 1559
Query: 479 GVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDI 522
G++ DMKE + E L K Q A + ++L+IDDI
Sbjct: 1560GIDCLLKGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDI 1691
>05356
Length = 2339
Score = 113 bits (282), Expect(2) = 5e-48, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 125/237 (52%), Gaps = 2/237 (0%)
Frame = +1
Query: 296 ISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKI 355
+ DLAQHY + V IR + K D R+ ++ A + + R ++ G L+ + +I
Sbjct: 1078 VGDLAQHYCNKYKVMVIRLLSKWDLRRLCKSICATALPKVTTPRNEECGY-CDLVYVDEI 1254
Query: 356 GDEYFTFITDCKDPKA-CTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGAS 414
G+ KD T+++RG++ I+ ++ER L D + + + D +LVPG GA+
Sbjct: 1255 GETPVVIFQQNKDESPITTVIIRGSTDNIMDDIERALDDGVNTFKALTKDDRLVPGAGAT 1434
Query: 415 EMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQES 474
E+ +A +T +++ G+EQ+ + A++LEVIPR L +N G +L+ L A H QE
Sbjct: 1435 EIELAKQITTYGESLPGLEQYAVKKFAESLEVIPRALAENTGMKATDILSKLYAAH-QEG 1611
Query: 475 CETWGVN-GETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKG 530
+ GV+ ++G+++D K+ + + + K A A +LR+D I+ G
Sbjct: 1612 QQNAGVDIDDSGSVLDAKQANLTDLYLNRYWGLKFAAAAACTVLRVDQIIMAKPAGG 1782
Score = 97.1 bits (240), Expect(2) = 5e-48, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Frame = +2
Query: 26 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISR 85
NI A K +A R+ GP KM+++ + + +TND ILRE++VQHPAAK ++ +
Sbjct: 284 NIEACKELAKTTRSAYGPHGQNKMVINHLEKLFVTNDAATILRELEVQHPAAKMLVLAAH 463
Query: 86 TQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMISTLKK--ISTP 143
Q++E GDGT V++ AG +L AE L + T VI Y +AL L K I
Sbjct: 464 QQEQECGDGTNFVLVFAGALLENAEQLLRMGLSVTEVIEGYELALKKAHEILPKLVIGHV 643
Query: 144 VDVNNREMMLSIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEK 203
++ N+E + + I +S+ +K LA ++ DA +V +D RV K
Sbjct: 644 KNLRNKEEVKTAIRTSVMSKQYGNEDFLA-DLITDACVSV-LPAKISFSVD---NVRVCK 808
Query: 204 IPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREED 263
I G + S ++G++ + V + ++ ++ + L+ + E++ + I E+
Sbjct: 809 ILGCGLLQSSTIQGMVFKRQVEGEITK--VEKAKVAVFTCPLDSMQTETKGTVLIKNAEE 982
Query: 264 FTRILQMEEEYIHQLCEDIIQLKPDVVI 291
+ EE+ + + + I + +V++
Sbjct: 983 LMSFSKGEEDMMEEQIKGIKEAGVNVIV 1066
>09900
Length = 1305
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 157/312 (50%), Gaps = 1/312 (0%)
Frame = +3
Query: 234 KNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITE 293
+ PRI LL+ LE K ++ + +++ I+ E + ++ + I Q VV+++
Sbjct: 51 RTPRIALLNIELELKSERDNAEVRVDNVQEYQSIVDAEWKILYDKLDKIHQSGAKVVLSK 230
Query: 294 KGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIK 353
I D+A Y ++ RV + D R +ACG I + + L D +GT EI+
Sbjct: 231 LPIGDVATQYFADRDMFCAGRVPEEDLRRTMKACGGSIQTTVQSLTPDVLGTCQLFDEIQ 410
Query: 354 KIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGA 413
IG E F C + CTI+LRG +++ + E ER+L DA+ + R + + +V GGGA
Sbjct: 411 -IGGERFNMFKGCTMARTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGA 587
Query: 414 SEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQE 473
EM V++ L E S + G EQ A A+ALEVIPR L N G +L LR KH Q
Sbjct: 588 IEMEVSYHLREHSHTIAGKEQLLMSAYAKALEVIPRQLCDNAGFDATNILNKLRQKHAQG 767
Query: 474 SCETW-GVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDD 532
TW GVN + D E +WEP VK+ A E L+L +D+ + +
Sbjct: 768 G--TWYGVNILREDIADNFEDCVWEPAVVKINALTAASEATALILSVDETIK------NP 923
Query: 533 QNRQTGAPDAGQ 544
++ Q AP AG+
Sbjct: 924 RSGQGDAPGAGR 959
>29864
Length = 1026
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 149/265 (56%), Gaps = 2/265 (0%)
Frame = +1
Query: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREI 70
N K E R Q+ NI AAK + D++R+ LGPK MKML+ G I +T DGN +L E+
Sbjct: 130 NPKAEVARASQALAVNIAAAKGLQDVLRSNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEM 309
Query: 71 QVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMAL 130
Q+QHP A + ++ QD+ GDGTTS +++ GE+L A+ ++ + +HP ++ + +A
Sbjct: 310 QIQHPTASLIARVATAQDDITGDGTTSNVLIIGELLKQADLYIAEGLHPRLITEGFELAR 489
Query: 131 DDMISTLKKISTPVDVNNREMMLSIINSSITTKVISRWSSLACNIALDAVKTVQFEENGR 190
+ + L+++ +V +RE ++ + +S+ TKV + + L +DAV +Q G
Sbjct: 490 NKALEVLEEVKVKREV-DRETLVQVARTSLRTKVHTELADLLTEHVVDAVLAIQXPGEG- 663
Query: 191 KEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKG 250
ID+ +E + DS ++RG++++ HP M+++ K+ I+ + SLEY+K
Sbjct: 664 --IDLHMVELME-MQHKTDLDSTLVRGLVMDHGARHPDMKKHTKDAFILTCNVSLEYEKT 834
Query: 251 ESQTDIEITREEDFTRILQMEEEYI 275
E + ++ ++++ E +I
Sbjct: 835 EVNSGFFYKTAQEREKLVEAERTFI 909
>17249
Length = 909
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 81/111 (72%), Gaps = 5/111 (4%)
Frame = +3
Query: 440 VAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQESCETWGVNGETGTLVDMKELGIWEPL 499
+++ALEVI RTLIQNCGA+TIR LT+LRAKH Q TWG++G TG +VDM E GIWEPL
Sbjct: 3 ISRALEVISRTLIQNCGANTIRTLTALRAKHAQGQKNTWGIDGNTGNIVDMAEFGIWEPL 182
Query: 500 AVKLQTYKTAVETAVLLLRIDDIVSGHKK-----KGDDQNRQTGAPDAGQE 545
+VKLQ YKTA ETA+LLLRIDDIVSG KK G + AP G E
Sbjct: 183 SVKLQVYKTACETAILLLRIDDIVSGTKKMDAAMSGASKQEAPAAPPPGGE 335
>06409
Length = 1533
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 157/298 (52%), Gaps = 6/298 (2%)
Frame = -3
Query: 233 IKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVIT 292
++ +I + + K + + + ++ R+L+ E YI + + I + +V++
Sbjct: 1492 VEKAKIGFIQFCISPPKTDMENQVIVSDYTQMDRVLREERNYILDIVKKIKKAGCNVLLI 1313
Query: 293 EKGI-----SDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGA 347
+K I SDLA H+L + + ++ + + D + + G R V+ + +++G+ A
Sbjct: 1312 QKSILRDAVSDLALHFLAKMKIMVVKDIEREDVEFVCKTLGCRPVASLDHFLPENLGS-A 1136
Query: 348 GLLEIKKIGDEYFTFITDCKDP-KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQ 406
L+E + G T +P + T+L+RG++K +L E +R+L DA+ V R ++
Sbjct: 1135 DLIEEVQTGSSKIVKATGIANPGQTVTVLIRGSNKLVLEEADRSLHDALCVIRCLVKKKA 956
Query: 407 LVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSL 466
L+ GGGA E ++ L + + G+EQ+ +RA A+ALEVIP TL +N G + I +T L
Sbjct: 955 LIAGGGAPETEMSMRLAAYANTLAGMEQYCFRAFAEALEVIPFTLAENAGLNPISTVTXL 776
Query: 467 RAKHTQESCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVS 524
R +H Q T G+N G + ++ E + +PL V A ET +L+IDDIV+
Sbjct: 775 RTRHAQGE-RTAGINVRKGAITNILEENVLQPLLVSTSAITLASETVRSILKIDDIVN 605
>12796
Length = 1316
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 173/340 (50%), Gaps = 6/340 (1%)
Frame = -3
Query: 193 IDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 252
+D+K + + GG +ED+ ++ G++ + I+ +I L+ + K +
Sbjct: 1308 VDLKNIKVIRSL-GGTVEDTELVNGLVFTSRSAGTNAPKRIEKAKIGLIQFCISAPKTDM 1132
Query: 253 QTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGI-----SDLAQHYLMRA 307
++ ++ R+L+ E YI + + I + +V++ +K I SDLAQH+L +
Sbjct: 1131 DHNVIVSDYAAMDRVLKEERSYILNIVKQIKKAGCNVLLVQKSILRDAVSDLAQHFLDKI 952
Query: 308 NVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 367
++ V + D + + R ++ + +++ + A L+E G F IT +
Sbjct: 951 KCLVVKDVEREDIEFVCKTLHCRPIASLDHFTAENM-SSADLVEEVASGTNKFVKITGIQ 775
Query: 368 DP-KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKS 426
+ + +I+ RG++K +L E R+L DA+ V R ++ + + GGGA E+ +A L +
Sbjct: 774 NQGRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVRNRAQIVGGGAPEIEMALQLAAAA 595
Query: 427 KAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQESCETWGVNGETGT 486
+ + GV+ + YRA A ALEVIP TL +N G + I +T LR +H Q + G+N G
Sbjct: 594 QTVDGVDAYCYRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGE-KNAGINVRKGA 418
Query: 487 LVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 526
+ D+ + +PL V A ET +L+IDDIV+ +
Sbjct: 417 ITDIFAENVVQPLLVSTSAITLATETVRSILKIDDIVNTY 298
>33770
Length = 484
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 104/161 (64%)
Frame = +1
Query: 48 KMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLS 107
KM+ G + +TNDG IL+++QV HPAAK ++E+S+ QD E GDGTT+V++LAG +L
Sbjct: 1 KMIQAANGDVTITNDGATILKQMQVLHPAAKMLVELSKAQDIEXGDGTTTVVVLAGSLLD 180
Query: 108 VAEHFLEQQMHPTVVISAYRMALDDMISTLKKISTPVDVNNREMMLSIINSSITTKVISR 167
+ L + +HPT++ A++ A + L + P+++++RE +LS ++S+ +KV+S+
Sbjct: 181 ASAKLLAKGIHPTMISEAFQKAASKCVELLDGMVKPLELSDRESLLSSASTSLNSKVVSQ 360
Query: 168 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGI 208
+SS+ IA+DAV V + +D+K ++K+ G I
Sbjct: 361 YSSMLAPIAVDAVLKV-IDPATATNVDLKDIKIIKKLGGTI 480
>02673
Length = 1243
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%)
Frame = +1
Query: 412 GASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHT 471
GA E+A + A+ E + ++ +EQ+ R+ ++ALE +P L +N G + I+ L ++++
Sbjct: 1 GAPEIAASVAVAEAADKISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKSRQV 180
Query: 472 QESCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDI 522
+E G++ DMKE + E L K Q A + ++L+IDDI
Sbjct: 181 KEKNPRLGIDCLLKGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDI 333
>30661
Length = 380
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%)
Frame = +3
Query: 349 LLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLV 408
L+E IG++ + +ACTI+LRGA+++IL E R+L DA+ V + + + V
Sbjct: 90 LIEEVMIGEDKLIKFSGVALGEACTIVLRGATQQILDEAXRSLHDALCVLSQTVKETRTV 269
Query: 409 PGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIP 448
GGG SEM +A A+++ + G E A A+E +P
Sbjct: 270 YGGGCSEMLMAEAVSQLAAKTPGKE-------AIAMEALP 368
>12205
Length = 564
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 493 LGIWEPLAVKLQTYKTAVETAVLLLRID-DIVSG 525
+G+W+ L+ K+ ++TAV+ L+R+D IV+G
Sbjct: 296 VGVWDNLSCKVGAWRTAVQCVCTLVRMDHGIVTG 397
>12323
Length = 1455
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 493 LGIWEPLAVKLQTYKTAVETAVLLLRIDD-IVSG 525
+G+W+ L+ K+ ++TAV+ L+R+D IV+G
Sbjct: 903 VGVWDNLSCKVGAWRTAVQCVCTLVRMDHGIVTG 1004
>12624
Length = 589
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 473 ESCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKT 508
+SCE WG+N +V + W LA ++ TY+T
Sbjct: 135 KSCEDWGLN---FFMVWTRATHCWRQLAARISTYRT 233
>00104
Length = 1480
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 259 TREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKT 318
T DFT L I C D+ ++KP + IT+K I +R +TA ++K
Sbjct: 35 TNVRDFTMFLC-----IFLYCSDMNKIKPTIKITKKAI--------IRIRMTASASIKKA 175
Query: 319 DNNR 322
NR
Sbjct: 176 TQNR 187
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31560656|ref|NP_032800.2| poly(A) binding protein,
cytoplasmic 1 [Mus musculus]
(636 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
17775 601 e-172
39438 139 3e-33
25691 78 9e-15
17681 78 1e-14
30672 78 1e-14
28652 72 6e-13
03000 70 2e-12
02343 66 5e-11
08958 65 6e-11
03744 63 5e-10
20488 62 6e-10
11687 60 2e-09
13822 60 3e-09
16427 57 2e-08
00302 56 4e-08
14258 55 7e-08
01278 54 2e-07
02140 54 3e-07
31310 54 3e-07
14637 53 4e-07
19868 51 2e-06
23322 49 4e-06
02415 49 5e-06
12506 49 6e-06
20169 49 7e-06
13457 35 8e-06
11019 48 1e-05
12350 48 1e-05
02502 48 2e-05
28455 47 2e-05
02064 47 2e-05
00029 47 2e-05
28605 47 3e-05
03200 46 4e-05
03059 45 1e-04
15371 44 2e-04
02091 44 2e-04
25746 44 3e-04
35379 43 5e-04
00556 42 6e-04
33516 42 7e-04
03903 42 7e-04
02347 42 7e-04
29364 41 0.001
32386 41 0.002
24983 40 0.002
09736 40 0.002
03406 40 0.003
02809 40 0.003
15503 40 0.004
26197 40 0.004
04988 40 0.004
23720 40 0.004
08670 38 0.011
03097 37 0.017
10194 37 0.019
28372 37 0.024
12096 37 0.028
05273 37 0.029
31618 36 0.037
39789 35 0.10
00781 35 0.10
25950 35 0.13
32733 35 0.14
25632 33 0.25
11579 33 0.52
23655 32 1.1
30934 31 1.8
11126 30 2.2
31265 30 3.7
26275 29 7.1
19556 28 7.9
>17775
Length = 1282
Score = 601 bits (1550), Expect = e-172, Method: Compositional matrix adjust.
Identities = 290/391 (74%), Positives = 328/391 (83%), Gaps = 1/391 (0%)
Frame = -2
Query: 1 MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ 60
MN PSYPMASLYVGDLHPDVTEAML+EKFS AGP+LSIRVCRDMITRRSLGYAYVNFQ
Sbjct: 1224 MNNPGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ 1045
Query: 61 QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120
QPADAERALDTMNFD +KG+P+RIMWSQRDPS+RKSGVGN+FIKNLDK+IDNKALYDTFS
Sbjct: 1044 QPADAERALDTMNFDTVKGRPIRIMWSQRDPSVRKSGVGNVFIKNLDKTIDNKALYDTFS 865
Query: 121 AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 180
AFGNILSCK+ CDE GSKGYGFVHFET+EAA +AI+K+NGMLLN +KV+VGRF RKER
Sbjct: 864 AFGNILSCKIACDEQGSKGYGFVHFETEEAARQAIDKVNGMLLNGKKVYVGRFIPRKERI 685
Query: 181 AELGARAKEFTNVYIKNFGEDMDDERLKELFGKF-GPALSVKVMTDESGKSKGFGFVSFE 239
+G + K F NVY+KNF L + L E GKS+GFGFVSFE
Sbjct: 684 MMMGDKLKRFNNVYVKNFC*GTG*RPAA*LVWQARQDHLXXGACRGEDGKSRGFGFVSFE 505
Query: 240 RHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVK 299
E A+KAVDE+NG E++G+ IY GRAQK+ ERQ ELK +FE++K +RI RYQGVNLYVK
Sbjct: 504 EPEGAEKAVDEINGTEVSGRIIYCGRAQKRAERQAELKERFEKIKLERINRYQGVNLYVK 325
Query: 300 NLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359
NLDD IDDERLRKEFS FGTITSAK+M EGGRSKGFGFVCFSSPEEATKAVTEMNGRI+
Sbjct: 324 NLDDSIDDERLRKEFSNFGTITSAKIMTEGGRSKGFGFVCFSSPEEATKAVTEMNGRIIV 145
Query: 360 TKPLYVALAQRKEERQAHLTNQYMQRMASVR 390
KPLYVALAQRKE+R+A L ++YMQ MA++R
Sbjct: 144 AKPLYVALAQRKEDRRAQLASRYMQHMANLR 52
>39438
Length = 2557
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 84/106 (79%), Gaps = 2/106 (1%)
Frame = +2
Query: 511 YKYAAGVRNPQQHLNAQPQVTMQQP--AVHVQGQEPLTASMLASAPPQEQKQMLGERLFP 568
YK +RN QP V Q P +V + GQEPLTASMLA+APPQEQKQMLGERLFP
Sbjct: 113 YKLNTSMRN--APAGVQPGVMTQAPPQSVVIPGQEPLTASMLAAAPPQEQKQMLGERLFP 286
Query: 569 LIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 614
LIQ M+P LAGKITGMLLEIDNSELLHMLES ESL++KV+EAVAVL
Sbjct: 287 LIQRMYPDLAGKITGMLLEIDNSELLHMLESQESLKAKVEEAVAVL 424
>25691
Length = 768
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
Frame = -2
Query: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGV 98
+ ++ RD T +SLGY +VN+++ DA++A+ T+N ++ K +++ ++ PS
Sbjct: 434 TCKLIRDKPTGQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLAR--PSCESIKG 261
Query: 99 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIE 156
N++I L KS+ L + F+ GNI++ +++ D+ SKG GF+ F+ + AERAI+
Sbjct: 260 ANLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIEAERAIQ 81
Query: 157 KMNGML 162
K+N +
Sbjct: 80 KLNNHI 63
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Frame = -2
Query: 219 SVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277
+ K++ D+ +G+S G+GFV+++R EDA KA+ +NG L K I V A+ E
Sbjct: 434 TCKLIRDKPTGQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLARPSCE------ 273
Query: 278 RKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGF 335
+G NLY+ L + L F+ G I +++++ + G SKG
Sbjct: 272 ------------SIKGANLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGV 129
Query: 336 GFVCFSSPEEATKAVTEMNGRI--VATKPLYVALAQ 369
GF+ F EA +A+ ++N I P+ V A
Sbjct: 128 GFIRFDQRIEAERAIQKLNNHIPDGCIDPITVKFAN 21
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 76/129 (58%), Gaps = 3/129 (2%)
Frame = -2
Query: 127 SCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
+CK++ D+ S GYGFV+++ QE A++AI +NG+ L ++ + V +R E+ G
Sbjct: 434 TCKLIRDKPTGQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSL--ARPSCESIKG 261
Query: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHED 243
A N+YI + + L+ LF G ++ +++ D+ +G SKG GF+ F++ +
Sbjct: 260 A------NLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIE 99
Query: 244 AQKAVDEMN 252
A++A+ ++N
Sbjct: 98 AERAIQKLN 72
>17681
Length = 964
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 45/205 (21%)
Frame = +2
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
++VGDL P++ L E F+P G I + R+ RD T +S GYA+V+F + A+AE A+ M
Sbjct: 38 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAM 217
Query: 73 NFDVIKGKPVRIMWSQRD-PSLRKSG-----------------VGNIFIKNLDKS----- 109
N I + +R WS R P R+S IKN +
Sbjct: 218 NGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGCGGGAGNGIKNNQRHTFEEV 397
Query: 110 --------------------IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
I ++ ++ F FG I +V D KG+ F+ F T+E
Sbjct: 398 YNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD----KGFAFIKFVTKE 565
Query: 150 AAERAIE--KMNGMLLNDRKVFVGR 172
AA RAIE ++ + N K F G+
Sbjct: 566 AAARAIEHTHISEVHGNHVKCFWGK 640
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 39/210 (18%)
Frame = +2
Query: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQ 148
P S +IF+ +L I+ + L + F+ FG I +C++V D SKGY FV F +
Sbjct: 8 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 187
Query: 149 EAAERAIEKMNGMLLNDRKVFVG------------------------------------R 172
AE AI+ MNG + R + +
Sbjct: 188 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGCGGGAGNGIK 367
Query: 173 FKSRKEREAELGARAKEFTNVYIKNFGED-MDDERLKELFGKFGPALSVKVMTDESGKSK 231
R E + T VY F + + DE + + F +FGP V+V D K
Sbjct: 368 NNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD-----K 532
Query: 232 GFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
GF F+ F E A +A++ + E++G +
Sbjct: 533 GFAFIKFVTKEAAARAIEHTHISEVHGNHV 622
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 34/193 (17%)
Frame = +2
Query: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
++++ + +++ E L+E F FG + +++ D ++ KSKG+ FVSF + +A+ A+
Sbjct: 35 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQA 214
Query: 251 MNGKELNGKQIYVGRAQKKV---------------------------------ERQTELK 277
MNG+ + + I + +K+ +R T +
Sbjct: 215 MNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGCGGGAGNGIKNNQRHT-FE 391
Query: 278 RKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGF 337
+ Q T Y G + N+ I DE + K F FG I +V + KGF F
Sbjct: 392 EVYNQSSPTNTTVYCG--GFPPNV---ISDELMHKHFMQFGPIQDVRVF----KDKGFAF 544
Query: 338 VCFSSPEEATKAV 350
+ F + E A +A+
Sbjct: 545 IKFVTKEAAARAI 583
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +2
Query: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTE 352
+++V +L I+ E LR+ F+PFG I++ +++ + +SKG+ FV F EA A+
Sbjct: 35 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQA 214
Query: 353 MNGRIVATKPLYVALAQRK 371
MNG+ + ++ + + RK
Sbjct: 215 MNGQWIGSRSIRTNWSTRK 271
>30672
Length = 877
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Frame = +3
Query: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMT-DESGKSKGFGFVSFERHEDAQKAVDE 250
++++N + +E+L E F + GP + V+ E GK +GFG+V F EDA KA D
Sbjct: 15 TLFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLEDAIKAKDT 194
Query: 251 MNGKELNGKQIYVGRAQ----------------------KKVERQTEL----------KR 278
+ +G++I + A KK+ QT + K+
Sbjct: 195 VT--HCSGRKISLSFADTKKSWKTKQKGGTETSDALGLGKKLPSQTAVTDGEPNPKPEKK 368
Query: 279 KFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV-MMEGGRSKGFGF 337
K +Q KQ+ R L ++NL + +R F FGTI+ + + +G RS+GF F
Sbjct: 369 KTKQPKQELGKR---CRLIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQGDRSRGFAF 539
Query: 338 VCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQ 384
V F+ + A KA+++MNG + +P+ V A K+ +A T Q Q
Sbjct: 540 VQFTEVKAAQKAISDMNGTAIMDRPVAVDWAVAKDRFEAS-TQQNQQ 677
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 45/212 (21%)
Frame = +3
Query: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEK 157
+F++NL N+ L + F G + + VV + K G+G+V F E A +A +
Sbjct: 15 TLFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLEDAIKAKDT 194
Query: 158 MNGMLLNDRKV---FVGRFKSRKEREA--------------------------------- 181
+ + RK+ F KS K ++
Sbjct: 195 VTH--CSGRKISLSFADTKKSWKTKQKGGTETSDALGLGKKLPSQTAVTDGEPNPKPEKK 368
Query: 182 -------ELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFG 234
ELG R + + I+N + ++ FGKFG V + + +S+GF
Sbjct: 369 KTKQPKQELGKRCR----LIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQGDRSRGFA 536
Query: 235 FVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
FV F + AQKA+ +MNG + + + V A
Sbjct: 537 FVQFTEVKAAQKAISDMNGTAIMDRPVAVDWA 632
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +3
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
L + +L EA + F G I + + RS G+A+V F + A++A+ M
Sbjct: 411 LIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQ-GDRSRGFAFVQFTEVKAAQKAISDM 587
Query: 73 NFDVIKGKPVRIMWS 87
N I +PV + W+
Sbjct: 588 NGTAIMDRPVAVDWA 632
>28652
Length = 918
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 15/266 (5%)
Frame = -2
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ-QPADAERALDT 71
++ G + D+ E L F G I +R+ D ++ + GY +V + + A AE
Sbjct: 725 VFCGKIPRDIFEDELIPLFEDCGTIWDLRLMMDPVSNLNRGYCFVTYTTKEAAAEAVKQH 546
Query: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
+++ KGK +++ S P+LR +F+ N+ KS + + F L +V
Sbjct: 545 DGYEIRKGKKLKVNISI--PNLR------LFVGNIPKSKTKEEILKEFEKHSEGLMDVIV 390
Query: 132 CDENGS-----KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
+ +G+ F+ ++T + A A R+ GRF+ + A
Sbjct: 389 YGSADNPKLKNRGFAFLEYDTHKNASAA----------KRRFTTGRFRVWQCDVIVDWAD 240
Query: 187 AKEFTN---------VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVS 237
+E N +Y++N D+ ++ LKE FG +G VK K K +GFV
Sbjct: 239 LQEEPNEETMSKVKVLYVRNLTGDVTEDDLKEKFGAYGKVERVK-------KIKDYGFVH 81
Query: 238 FERHEDAQKAVDEMNGKELNGKQIYV 263
+E EDA KA+D+++G+++ +I V
Sbjct: 80 YEDREDALKALDDLHGEKIGNLEIDV 3
>03000
Length = 778
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Frame = +3
Query: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAI--- 155
+FI L D +L F +G I+ C V+ D N S+G+GF+ ++ E+ ++A
Sbjct: 93 LFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQAQANR 272
Query: 156 -EKMNGMLLNDRKVFVGRFKSRKER-EAELGARAKEFTNVYIKNFGEDMDDERLKELFGK 213
K++G R+V R R+E +E+ K+ +++ ED ++ +++ F +
Sbjct: 273 PHKIDG-----REVDTKRAMPREESGRSEVQQSVKK---MFVGGVKEDTTEDMIRDTFNE 428
Query: 214 FGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
FG V ++ D+ +GK++GF FV+F H+ KAV + +LNG+Q+ V +AQ K
Sbjct: 429 FGEITGVDLIQDKGTGKNRGFCFVTFGDHDSVDKAVLKKR-HDLNGRQVEVKKAQSK 596
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Frame = +3
Query: 182 ELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFER 240
+L A++F ++I + D++ L+ F +G + VM D + K S+GFGF++++
Sbjct: 60 DLDPNAEQFRKLFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKD 239
Query: 241 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVN-LYVK 299
E ++D Q R K R+ + KR + + R Q V ++V
Sbjct: 240 AE----SID----------QAQANRPHKIDGREVDTKRAMPREESGRSEVQQSVKKMFVG 377
Query: 300 NLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVT----EM 353
+ + ++ +R F+ FG IT ++ + G+++GF FV F + KAV ++
Sbjct: 378 GVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFCFVTFGDHDSVDKAVLKKRHDL 557
Query: 354 NGRIVATK 361
NGR V K
Sbjct: 558 NGRQVEVK 581
>02343
Length = 1715
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Frame = -2
Query: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVD 249
TN+YI+ + D+ L L FG S K + D++ K KG+GFV F+ A++AV
Sbjct: 1264 TNLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQ 1085
Query: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
+ + + Q ++ ++ EQ NLY+ NL ++
Sbjct: 1084 ALQAQGI----------------QAQMAKQQEQ---------DPTNLYIANLPLHFTEKH 980
Query: 310 LRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--ATKPLYVA 366
L F +GT+ S +++ + G S+ GF S ++ + N +++ ++PL V
Sbjct: 979 LEGLFKDYGTVISTRILRKPDGISRCVGFARMESRDKCDTVINTFNNKMISGCSEPLLVK 800
Query: 367 LAQRKEERQAH 377
A ++++
Sbjct: 799 FADSGNKKKSQ 767
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Frame = -2
Query: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
+LY+ L P+ T+ L G I S + D T + GY +V+F P AERA+
Sbjct: 1261 NLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQA 1082
Query: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
+ I+ + + ++DP+ N++I NL K L F +G ++S +++
Sbjct: 1081 LQAQGIQAQMAK--QQEQDPT-------NLYIANLPLHFTEKHLEGLFKDYGTVISTRIL 929
Query: 132 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLN 164
+G S+ GF E+++ + I N +++
Sbjct: 928 RKPDGISRCVGFARMESRDKCDTVINTFNNKMIS 827
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -2
Query: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVT 351
NLY++ L D+ L FGTITS K +++ + KG+GFV F +P A +AV
Sbjct: 1264 TNLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQ 1085
Query: 352 EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386
+ + + AQ ++++ TN Y+ +
Sbjct: 1084 ALQAQGIQ--------AQMAKQQEQDPTNLYIANL 1004
>08958
Length = 680
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Frame = +2
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER-ALDT 71
L+VG+L PDV+E + FSP G + V + R G+ ++++ A+A + ALD
Sbjct: 74 LFVGNLTPDVSEDDFKKLFSPFGEVSEAYVN----SGRGFGFIRLDYRHNAEAAKAALDG 241
Query: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
+ KG+ +R+ ++ +L+ +KNL + N+ L F+ FG++ V+
Sbjct: 242 LQ---RKGRSLRVRYATHGAALK--------VKNLHPYVSNELLEQAFTQFGDLERAIVI 388
Query: 132 CDENG-SKGYGFVHFETQEAAERAIEKMN-GMLL 163
DE G S G G V F + A++A+ ++N G+ L
Sbjct: 389 VDERGRSTGEGVVEFVRKPGAQQALRRINEGVFL 490
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%)
Frame = +2
Query: 96 SGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAI 155
+G +F+ NL + FS FG + V N +G+GF+ + + AE A
Sbjct: 59 TGRCRLFVGNLTPDVSEDDFKKLFSPFGEVSEAYV----NSGRGFGFIRLDYRHNAEAAK 226
Query: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFG 215
++G+ R + V R A GA K +KN + +E L++ F +FG
Sbjct: 227 AALDGLQRKGRSLRV--------RYATHGAALK------VKNLHPYVSNELLEQAFTQFG 364
Query: 216 PALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
V+ DE G+S G G V F R AQ+A+ +N
Sbjct: 365 DLERAIVIVDERGRSTGEGVVEFVRKPGAQQALRRIN 475
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Frame = +2
Query: 186 RAKEFTN---VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
R K+FT +++ N D+ ++ K+LF FG V + +GFGF+ +
Sbjct: 44 RRKKFTGRCRLFVGNLTPDVSEDDFKKLFSPFGEVSEAYVNS-----GRGFGFIRLDYRH 208
Query: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
+A+ A ++G + G+ + V A G L VKNL
Sbjct: 209 NAEAAKAALDGLQRKGRSLRVRYAT------------------------HGAALKVKNLH 316
Query: 303 DGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT- 360
+ +E L + F+ FG + A V++ E GRS G G V F A +A+ +N +
Sbjct: 317 PYVSNELLEQAFTQFGDLERAIVIVDERGRSTGEGVVEFVRKPGAQQALRRINEGVFLFG 496
Query: 361 ---KPLYVALAQRKEE 373
KP+ V + K+E
Sbjct: 497 ADPKPIEVEPLEHKDE 544
>03744
Length = 3486
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = -1
Query: 287 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPE 344
R+ G NL++ +L D+ L + F PFG + SAKV ++ SK FGFV + SP
Sbjct: 3237 RVPGPDGANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPL 3058
Query: 345 EATKAVTEMNGRIVATKPLYVALAQRKEER 374
A A+T MNG + K L V L + K ++
Sbjct: 3057 AAQAAITSMNGFQIGMKRLKVQLKRSKNDK 2968
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -1
Query: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157
N+FI +L + ++ L F FGN++S KV D+ N SK +GFV +++ AA+ AI
Sbjct: 3213 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAITS 3034
Query: 158 MNGMLLNDRKVFVGRFKSRKER 179
MNG + +++ V +S+ ++
Sbjct: 3033 MNGFQIGMKRLKVQLKRSKNDK 2968
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = -1
Query: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
N++I + ++ D+ L ++F FG +S KV D ++ SK FGFVS++ AQ A+
Sbjct: 3216 ANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAIT 3037
Query: 250 EMNGKELNGKQIYVGRAQKKVER 272
MNG ++ K++ V + K ++
Sbjct: 3036 SMNGFQIGMKRLKVQLKRSKNDK 2968
>20488
Length = 3281
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 293 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAV 350
G NL++ +L D+ L + F PFG + SAKV ++ SK FGFV + SP A A+
Sbjct: 2705 GANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAI 2884
Query: 351 TEMNGRIVATKPLYVALAQRKEER 374
T MNG + K L V L + K ++
Sbjct: 2885 TSMNGFQIGMKRLKVQLKRSKNDK 2956
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +2
Query: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157
N+FI +L + ++ L F FGN++S KV D+ N SK +GFV +++ AA+ AI
Sbjct: 2711 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAITS 2890
Query: 158 MNGMLLNDRKVFVGRFKSRKER 179
MNG + +++ V +S+ ++
Sbjct: 2891 MNGFQIGMKRLKVQLKRSKNDK 2956
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
N++I + ++ D+ L ++F FG +S KV D ++ SK FGFVS++ AQ A+
Sbjct: 2708 ANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAIT 2887
Query: 250 EMNGKELNGKQIYVGRAQKKVER 272
MNG ++ K++ V + K ++
Sbjct: 2888 SMNGFQIGMKRLKVQLKRSKNDK 2956
>11687
Length = 676
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Frame = +3
Query: 1 MNPSA-------PSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLG 53
MNPS P ++VG + ++ E L + F GP+ S+ + RD T +S G
Sbjct: 99 MNPSTQVTSQGEPDADSIKMFVGQIPRNMDENELRKMFEDYGPVHSLNILRDKNTGQSKG 278
Query: 54 YAYVNF---QQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNI-----FIKN 105
+V F + DA+ AL + + PV++ + S +++G N+ F+
Sbjct: 279 CCFVTFFTRKAALDAQNALHNVKTMPMMHHPVQMKPAD---SEKRNGERNVEERKLFVGM 449
Query: 106 LDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMN 159
L K + + F +FG+I C V+ D NG S+G F+ F +++ A +I+ M+
Sbjct: 450 LSKKLSENDVRMLFESFGSIDDCTVLRDSNGTSRGCAFITFASRQCAMNSIKGMH 614
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Frame = +3
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHE---DAQKAV 248
+++ +MD+ L+++F +GP S+ ++ D+ +G+SKG FV+F + DAQ A+
Sbjct: 156 MFVGQIPRNMDENELRKMFEDYGPVHSLNILRDKNTGQSKGCCFVTFFTRKAALDAQNAL 335
Query: 249 DEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDE 308
+ + + + A + KR E+ ++R L+V L + +
Sbjct: 336 HNVKTMPMMHHPVQMKPADSE-------KRNGERNVEER-------KLFVGMLSKKLSEN 473
Query: 309 RLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIV---ATKPLY 364
+R F FG+I V+ + G S+G F+ F+S + A ++ M+ + PL
Sbjct: 474 DVRMLFESFGSIDDCTVLRDSNGTSRGCAFITFASRQCAMNSIKGMHHSQTMEGCSSPLV 653
Query: 365 VALA 368
V +A
Sbjct: 654 VKMA 665
>13822
Length = 963
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = -1
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
+++ N + L++L G FG L V+++ +E G SKGFGFV+F +A++A D+MN
Sbjct: 336 LHVSNIPFRFREADLRQLLGPFGTILDVEIIFNERG-SKGFGFVTFAHSAEAERARDKMN 160
Query: 253 GKELNGKQIYVGRAQKKV 270
G + G++I V A +V
Sbjct: 159 GTVVEGRKIEVNNATARV 106
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = -1
Query: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
+ + N+ L FG IL +++ +E GSKG+GFV F AERA +KMNG
Sbjct: 336 LHVSNIPFRFREADLRQLLGPFGTILDVEIIFNERGSKGFGFVTFAHSAEAERARDKMNG 157
Query: 161 MLLNDRKVFVGRFKSR 176
++ RK+ V +R
Sbjct: 156 TVVEGRKIEVNNATAR 109
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = -1
Query: 266 AQKKVERQTELKRKFE----QMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTIT 321
A VE+ TE+ E Q+ I+ L+V N+ + LR+ PFGTI
Sbjct: 438 ANGTVEQSTEVNSDGEVQGVQVPPQAISPEGPKRLHVSNIPFRFREADLRQLLGPFGTIL 259
Query: 322 SAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQ 381
+++ SKGFGFV F+ EA +A +MNG +V + + V A T +
Sbjct: 258 DVEIIFNERGSKGFGFVTFAHSAEAERARDKMNGTVVEGRKIEVNNA----------TAR 109
Query: 382 YMQRMASVRAVPN 394
M + + ++PN
Sbjct: 108 VMTKKVAAPSIPN 70
>16427
Length = 1313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATKAVTEM 353
L+V L + ID++ L +EFS FG IT + V+ + R S+GFGFV + +P +A +AV M
Sbjct: 142 LFVGGLAEEIDEKVLEREFSKFGRITESMVIRDKVRQVSRGFGFVTYENPMDAEEAVKHM 321
Query: 354 NGRIVATKPLYVALAQR 370
+G+ + K L+V A R
Sbjct: 322 DGKEILGKKLHVEDAVR 372
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEM 251
+++ E++D++ L+ F KFG V+ D+ + S+GFGFV++E DA++AV M
Sbjct: 142 LFVGGLAEEIDEKVLEREFSKFGRITESMVIRDKVRQVSRGFGFVTYENPMDAEEAVKHM 321
Query: 252 NGKELNGKQIYV 263
+GKE+ GK+++V
Sbjct: 322 DGKEILGKKLHV 357
>00302
Length = 927
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -1
Query: 207 LKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
L+E+FG++G V+V+ D ++G+S+GF FV F+ EDA +A D NG E++G++I V
Sbjct: 417 LREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAKDRCNGIEIDGRKIRV 244
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = -1
Query: 113 KALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
+ L + F +G+I +VV D S+G+ FV+F++ E A A ++ NG+ ++ RK+ V
Sbjct: 423 RGLREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAKDRCNGIEIDGRKIRV 244
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 293 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAV 350
G++LY + + LR+ F +G I+ +V+ + GRS+GF FV F S E+A +A
Sbjct: 447 GLSLYTQ-------ERGLREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAK 289
Query: 351 TEMNGRIVATKPLYVALA 368
NG + + + V +
Sbjct: 288 DRCNGIEIDGRKIRVDFS 235
>14258
Length = 1063
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +2
Query: 304 GIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
G+ D+ L + F PFG + SAKV ++ SK FGFV + SP A A++ MNG + K
Sbjct: 92 GVGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISSMNGFQIGMK 271
Query: 362 PLYVALAQRKEER 374
L V L + K ++
Sbjct: 272 RLKVQLKRPKNDK 310
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 204 DERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262
D+ L ++F FG +S KV D ++ SK FGFVS++ AQ A+ MNG ++ K++
Sbjct: 101 DQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISSMNGFQIGMKRLK 280
Query: 263 V 263
V
Sbjct: 281 V 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Frame = +2
Query: 110 IDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRK 167
+ ++ L F FGN++S KV D+ N SK +GFV +++ +A+ AI MNG + ++
Sbjct: 95 VGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISSMNGFQIGMKR 274
Query: 168 VFVGRFKSRKERE------AELGARAKEFTNVY 194
+ V + + ++ A LG+ + + T Y
Sbjct: 275 LKVQLKRPKNDKPY*TSCLAXLGSASSDDTMAY 373
>01278
Length = 1082
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 186 RAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDA 244
R E + + N ED + L+ELF FGP + + D+ +G+SKGF F++F R EDA
Sbjct: 620 RKDEAATIRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDA 799
Query: 245 QKAVDEMNG 253
+A+ ++G
Sbjct: 800 SRAIAGVSG 826
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +2
Query: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
A++ V +L D E+ L E F P GPI I + +D +T +S G+A++NF + DA RA+
Sbjct: 635 ATIRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDASRAI 811
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 94 RKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAA 151
RK I + NL + L + F FG I + D+ SKG+ F++F +E A
Sbjct: 620 RKDEAATIRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDA 799
Query: 152 ERAIEKMNGM 161
RAI ++G
Sbjct: 800 SRAIAGVSGF 829
>02140
Length = 1796
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +3
Query: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
P L+V L+P T+ L FS GPI S V RD T+ SL YA+V F++P E A
Sbjct: 795 PDNVLFVCKLNPVTTDEDLEMIFSRFGPITSCEVIRDHKTKESLQYAFVEFEKPEHCENA 974
Query: 69 LDTMNFDVIKGKPVRIMWSQ 88
M+ +I + + + +SQ
Sbjct: 975 YFKMDNVLIDDRRIHVDFSQ 1034
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKG--YGFVHFETQEAAERAIEKM 158
+F+ L+ ++ L FS FG I SC+V+ D + Y FV FE E E A KM
Sbjct: 807 LFVCKLNPVTTDEDLEMIFSRFGPITSCEVIRDHKTKESLQYAFVEFEKPEHCENAYFKM 986
Query: 159 NGMLLNDRKVFV 170
+ +L++DR++ V
Sbjct: 987 DNVLIDDRRIHV 1022
>31310
Length = 469
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = -3
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
+Y+ + ++ ++ +K+ F FGP SV + D + K KGF F+ ++ E AQ A+++M
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 252 NGKELNGKQIYVGR 265
NG + G+ I VGR
Sbjct: 137 NGVMIGGRNIKVGR 96
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Frame = -3
Query: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
M +YVG ++ ++ E + + F P GPI S+ + D IT + G++++ + P A+ AL
Sbjct: 326 MCRIYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLAL 147
Query: 70 DTMNFDVIKGKPVRI 84
+ MN +I G+ +++
Sbjct: 146 EQMNGVMIGGRNIKV 102
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = -3
Query: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKM 158
I++ +++ I + F FG I S + D N KG+ F+ ++ EAA+ A+E+M
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 159 NGMLLNDRKVFVGRFKSRKERE---AELGARAKEFTNVYI 195
NG+++ R + VGR + + + +L A + +YI
Sbjct: 137 NGVMIGGRNIKVGRPSNMPQAQPIIEQLAMEATHYFRIYI 18
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = -3
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
+YV +++ I ++ +++ F PFG I S + + + KGF F+ + PE A A+ +M
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 354 NGRIVATKPLYV 365
NG ++ + + V
Sbjct: 137 NGVMIGGRNIKV 102
>14637
Length = 455
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = -1
Query: 281 EQMKQDRITRYQ----GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKG 334
QM+Q+ + G NL++ +L D+ L + F PFG + SAKV ++ SK
Sbjct: 254 NQMQQNAAAKQSEGPDGSNLFIYHLPQEFGDQDLMQMFMPFGNVISAKVFIDKQTNLSKC 75
Query: 335 FGFVCFSSPEEATKAVTEMNG 355
FGFV + SP A A++ MNG
Sbjct: 74 FGFVSYDSPMSAQDAISSMNG 12
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = -1
Query: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157
N+FI +L + ++ L F FGN++S KV D+ N SK +GFV +++ +A+ AI
Sbjct: 200 NLFIYHLPQEFGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISS 21
Query: 158 MNGMLL 163
MNG L
Sbjct: 20 MNGFRL 3
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = -1
Query: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
+N++I + ++ D+ L ++F FG +S KV D ++ SK FGFVS++ AQ A+
Sbjct: 203 SNLFIYHLPQEFGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAIS 24
Query: 250 EMNGKEL 256
MNG L
Sbjct: 23 SMNGFRL 3
>19868
Length = 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Frame = +2
Query: 205 ERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQK----AVDEMNGKELNGK 259
E L++ F KFG V VM D + +S+GFGF++F K A E++GK+++ K
Sbjct: 41 ESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQATHELDGKKIDPK 220
Query: 260 QIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGT 319
+ RA ++ +T+ ++V L E ++ F FG
Sbjct: 221 VAFPRRAHPRMVTRTK-------------------KIFVGGLSAPTTLEDVKNYFEQFGP 343
Query: 320 ITSAKVMME--GGRSKGFGFVCFS 341
I A +M + R +GFGFV S
Sbjct: 344 IEDAMLMFDKQTNRHRGFGFVTIS 415
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Frame = +2
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
++VG L + L + F+ G I + V +D TRRS G+ ++ F PA ++ L
Sbjct: 5 MFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQA 184
Query: 73 NFDVIKGKPV--RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
+ + GK + ++ + +R + IF+ L + + + F FG I +
Sbjct: 185 THE-LDGKKIDPKVAFPRRAHPRMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAML 361
Query: 131 VCDE--NGSKGYGFV 143
+ D+ N +G+GFV
Sbjct: 362 MFDKQTNRHRGFGFV 406
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 6/145 (4%)
Frame = +2
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATK----A 349
++V L E LR F+ FG IT VM + RS+GFGF+ F P K A
Sbjct: 5 MFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQA 184
Query: 350 VTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYF 409
E++G+ + K VA +R R T + S V N ++ P
Sbjct: 185 THELDGKKIDPK---VAFPRRAHPRMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDA 355
Query: 410 MAAIPQTQNRAAYYPPSQIAQLRPS 434
M + NR + I++ R S
Sbjct: 356 MLMFDKQTNRHRGFGFVTISKRRHS 430
>23322
Length = 471
Score = 49.3 bits (116), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = -2
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
+++ ED ++ +++ F +FG V ++ D+ +GK++GF FV+F H+ KAV +
Sbjct: 404 MFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFCFVTFGDHDSVDKAVLKK 225
Query: 252 NGKELNGKQIYVGRAQKK 269
+LNG+Q+ V +AQ K
Sbjct: 224 R-HDLNGRQVEVKKAQSK 174
Score = 36.2 bits (82), Expect = 0.036, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Frame = -2
Query: 277 KRKFEQMKQDRITRYQGVN-LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG--RSK 333
KR + + R Q V ++V + + ++ +R F+ FG IT ++ + G +++
Sbjct: 464 KRAMPREESGRSEVQQSVKKMFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNR 285
Query: 334 GFGFVCFSSPEEATKAVT----EMNGRIVATK 361
GF FV F + KAV ++NGR V K
Sbjct: 284 GFCFVTFGDHDSVDKAVLKKRHDLNGRQVEVK 189
>02415
Length = 2763
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = -1
Query: 184 GARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242
G + +T +++ D L+E F KFG V+TD ++GKS+G+GFV+
Sbjct: 1947 GQKDTTYTKIFVGGLPYHTTDHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFVTMADRT 1768
Query: 243 DAQKAVDE----MNGKELNGKQIYVG 264
A +A + ++G++ N Y+G
Sbjct: 1767 GADRACKDPNPIIDGRKANVNLAYIG 1690
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = -1
Query: 84 IMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYG 141
++ Q+D + K IF+ L + +L + F FG+I V+ D + G S+GYG
Sbjct: 1956 LITGQKDTTYTK-----IFVGGLPYHTTDHSLREYFDKFGDIDEAVVITDRQTGKSRGYG 1792
Query: 142 FVHFETQEAAERAIEKMNGMLLNDRKVFV 170
FV + A+RA + N +++ RK V
Sbjct: 1791 FVTMADRTGADRACKDPN-PIIDGRKANV 1708
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = -1
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
++VG L T+ L E F G I V D T +S GY +V A+RA
Sbjct: 1920 IFVGGLPYHTTDHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFVTMADRTGADRACKDP 1741
Query: 73 NFDVIKGKPVRI 84
N +I G+ +
Sbjct: 1740 N-PIIDGRKANV 1708
>12506
Length = 1056
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = -3
Query: 201 DMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
++DD+ L F FG + +++ D E+ K +GF F+ FE EDA A+D MN EL G+
Sbjct: 1033 EVDDKVLHAAFLPFGDIVDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNMNESELFGR 854
Query: 260 QIYVGRAQ 267
I V A+
Sbjct: 853 TIRVNLAK 830
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -3
Query: 305 IDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
+DD+ L F PFG I ++ + E + +GF F+ F E+A A+ MN + +
Sbjct: 1030 VDDKVLHAAFLPFGDIVDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNMNESELFGRT 851
Query: 363 LYVALAQ 369
+ V LA+
Sbjct: 850 IRVNLAK 830
>20169
Length = 1364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = -1
Query: 185 ARAKEFT---NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241
+R ++F+ VY+ G + L++ F K+GP +V V + GF FV FE +
Sbjct: 1097 SRHRDFSLDCKVYVGELGHGCAKQELEDKFAKYGPLKNVWVAR----RPAGFAFVEFEDN 930
Query: 242 EDAQKAVDEMNGKELNGKQIYV 263
DA+ AV ++G +NG++ V
Sbjct: 929 RDAEDAVQALDGARINGRRARV 864
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = -1
Query: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
+YVG+L + L +KF+ GP+ ++ + RR G+A+V F+ DAE A+
Sbjct: 1070 CKVYVGELGHGCAKQELEDKFAKYGPLKNV-----WVARRPAGFAFVEFEDNRDAEDAVQ 906
Query: 71 TMNFDVIKGKPVRIMWS 87
++ I G+ R+ S
Sbjct: 905 ALDGARINGRRARVEMS 855
>13457
Length = 4857
Score = 35.0 bits (79), Expect(2) = 8e-06, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME 328
+G NL++ +L D L + F PFG + SAKV ++
Sbjct: 2428 EGCNLFIYHLPQXXGDAELAQMFVPFGNVISAKVYVD 2318
Score = 32.7 bits (73), Expect(2) = 8e-06, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 335 FGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAH 377
FGFV F +P A A+ MNG + K L V L + K+ + +
Sbjct: 2294 FGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 2166
Score = 30.8 bits (68), Expect(2) = 0.005, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYG 141
N+FI +L + + L F FGN++S KV D N SK G
Sbjct: 2419 NLFIYHLPQXXGDAELAQMFVPFGNVISAKVYVDRATNQSKCLG 2288
Score = 27.3 bits (59), Expect(2) = 0.005, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -2
Query: 140 YGFVHFETQEAAERAIEKMNGMLLNDRKV 168
+GFV F+ +A+ AI+ MNG + +++
Sbjct: 2294 FGFVSFDNPASAQAAIQAMNGFQIGMKRL 2208
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
FGFVSF+ AQ A+ MNG ++ K++ V
Sbjct: 2294 FGFVSFDNPASAQAAIQAMNGFQIGMKRLKV 2202
>11019
Length = 552
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 14/171 (8%)
Frame = -1
Query: 205 ERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDE----MNGKELNGK 259
E L+ F KFG VM D + K S+GFGFV+++ + + ++ K LN
Sbjct: 522 ETLRSYFEKFGEIKESMVMKDPTSKRSRGFGFVTYKDPSNVDNVLANGPHCIDSKTLNFS 343
Query: 260 QI---YVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSP 316
+ Y + Q + K F + R+ + ++V L E ++ F
Sbjct: 342 NMTTFYSNQDLLPYPPQVDPKVAFPRKSNPRMVT-KTKKIFVGGLSSSTTVEDIKNYFKA 166
Query: 317 FGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVT----EMNGRIVATK 361
+GTI A +M + R +GF FV F + K E+N ++V TK
Sbjct: 165 YGTIEEATLMFDKVTSRHRGFAFVTFDNESTVDKVCEIHFHEINSKMVETK 13
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 30/172 (17%)
Frame = -1
Query: 15 VGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL----- 69
+G L T L F G I V +D ++RS G+ +V ++ P++ + L
Sbjct: 552 IGGLSWQTTTETLRSYFEKFGEIKESMVMKDPTSKRSRGFGFVTYKDPSNVDNVLANGPH 373
Query: 70 ----DTMNF----------DVIKGKPVRIMWSQRDPSL---RKSG------VGNIFIKNL 106
T+NF D++ P Q DP + RKS IF+ L
Sbjct: 372 CIDSKTLNFSNMTTFYSNQDLLPYPP------QVDPKVAFPRKSNPRMVTKTKKIFVGGL 211
Query: 107 DKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYGFVHFETQEAAERAIE 156
S + + + F A+G I ++ D+ S +G+ FV F+ + ++ E
Sbjct: 210 SSSTTVEDIKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTFDNESTVDKVCE 55
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = -1
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
++VG L T + F G I + D +T R G+A+V F + ++ + +
Sbjct: 228 IFVGGLSSSTTVEDIKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTFDNESTVDKVCE-I 52
Query: 73 NFDVIKGKPVRIMWSQ 88
+F I K V +Q
Sbjct: 51 HFHEINSKMVETKKAQ 4
>12350
Length = 975
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Frame = -2
Query: 204 DERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262
++ L+ F +FG L V+V D ++G+SKGFGF+ F +E K + + + ++G+
Sbjct: 581 EDDLRSYFSQFGDLLMVQVKKDPKTGQSKGFGFIRFAEYESQLKCMAQRH--MIDGRWCD 408
Query: 263 VGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITS 322
V K Q + RK ++V D + + LR+ FS FG +
Sbjct: 407 VRIPNSKEGAQQLMNRK----------------IFVGRCTDDMTADDLRQFFSKFGEVVD 276
Query: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAVTE 352
+ + F FV F+ PE A E
Sbjct: 275 VFIPRP---FRAFAFVSFADPEVAQSLYGE 195
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Frame = -2
Query: 115 LYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR 172
L FS FG++L +V D SKG+GF+ F E+ + + + R + GR
Sbjct: 572 LRSYFSQFGDLLMVQVKKDPKTGQSKGFGFIRFAEYESQLKCMAQ--------RHMIDGR 417
Query: 173 FKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKG 232
+ + ++ GA+ +++ +DM + L++ F KFG + V + +
Sbjct: 416 WCDVRIPNSKEGAQQLMNRKIFVGRCTDDMTADDLRQFFSKFGEVVDVFIPR----PFRA 249
Query: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYV-GRAQKKVERQ 273
F FVSF E AQ E + + G +++ G A K E+Q
Sbjct: 248 FAFVSFADPEVAQSLYGEDH--IIKGASVHISGAAPKPNEKQ 129
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = -2
Query: 289 TRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEA 346
+R + +L V L ++ LR FS FG + +V + G+SKGFGF+ F+ E
Sbjct: 635 SRQKCSDLIVLGLPWKSTEDDLRSYFSQFGDLLMVQVKKDPKTGQSKGFGFIRFAEYESQ 456
Query: 347 TKAVTE---MNGRIVATK 361
K + + ++GR +
Sbjct: 455 LKCMAQRHMIDGRWCDVR 402
>02502
Length = 1557
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Frame = -3
Query: 80 KPVRIMWSQRDP-------SLRKSGVGNIF-----------IKNLDKSIDNKALYDTFSA 121
+P+R W+ R P S+R+ +F ++ + + +++TF
Sbjct: 1552 RPIRTNWATRKPLAPIAKDSVRQLSYDEVFNQSSQTNCTVYCGGVNNGLTEELMHNTFKD 1373
Query: 122 FGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 178
FG+IL ++ D KG+ F+ F ++AA AI ++G ++ND+ V K E
Sbjct: 1372 FGSILEVRIFKD----KGFAFIRFNNKDAATNAICTIHGTVINDQVVRCSWGKESNE 1214
>28455
Length = 573
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = -1
Query: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMN 159
+F+KNL + +AL F G + ++V +G SKG +V FET+E A +A+ K +
Sbjct: 534 LFVKNLPFTCSAEALETIFKEHGKVKDVRLVTYRSGASKGLAYVEFETEEMATQAVMKTD 355
Query: 160 GMLLNDRKVFVG 171
G+ + D + V
Sbjct: 354 GLQVGDHMISVA 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = -1
Query: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 244
A + E +++KN E L+ +F + G V+++T SG SKG +V FE E A
Sbjct: 558 ATSLEKNKLFVKNLPFTCSAEALETIFKEHGKVKDVRLVTYRSGASKGLAYVEFETEEMA 379
Query: 245 QKAVDEMNGKELNGKQIYVG 264
+AV + +G ++ I V
Sbjct: 378 TQAVMKTDGLQVGDHMISVA 319
>02064
Length = 1195
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +1
Query: 287 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEA 346
R+TR + VKNL I + LR+ F G + +++ M+ GRS G G V F++ ++A
Sbjct: 58 RVTRPDNCTVQVKNLPYAITWQDLRERFQEIGVVKYSEITMDKGRSTGQGLVRFATEDDA 237
Query: 347 TKAVTEMN-----GRIVATKPLYVALAQR 370
+A+ M+ GR + K +Y QR
Sbjct: 238 VRAINSMDRTRYEGRTIGVK-MYRG*WQR 321
>00029
Length = 2204
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = -3
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
++I N G+D D E L+ LF K+G V+ K FGFV + +A A+ +N
Sbjct: 2130 IFIGNLGDDTDPEELRALFEKYGSVAECDVL-------KNFGFVHMVKKGEADDAISNLN 1972
Query: 253 GKELNGKQIYV 263
G + G+++ V
Sbjct: 1971 GYNIGGQRMRV 1939
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = -3
Query: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
IFI NL D + L F +G++ C V+ K +GFVH + A+ AI +NG
Sbjct: 2130 IFIGNLGDDTDPEELRALFEKYGSVAECDVL------KNFGFVHMVKKGEADDAISNLNG 1969
Query: 161 MLLNDRKVFV 170
+ +++ V
Sbjct: 1968 YNIGGQRMRV 1939
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = -3
Query: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEM 353
+ +++ NL D D E LR F +G++ V+ K FGFV EA A++ +
Sbjct: 2136 IKIFIGNLGDDTDPEELRALFEKYGSVAECDVL------KNFGFVHMVKKGEADDAISNL 1975
Query: 354 NGRIVATKPLYVALA 368
NG + + + V L+
Sbjct: 1974 NGYNIGGQRMRVELS 1930
>28605
Length = 697
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -3
Query: 101 IFIKNLDKSIDNKA-LYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
+F+ NL ++A L + FS +GN+L V + YGFV F T+E RA+E MN
Sbjct: 563 VFVANLSSDETSEAELQELFSKYGNVLDTLVHHNR-----YGFVQFSTEEEGRRAVEAMN 399
Query: 160 GMLLNDRKV 168
G + +K+
Sbjct: 398 GYMFYRKKL 372
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -3
Query: 191 TNVYIKNFGEDMDDE-RLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVD 249
+ V++ N D E L+ELF K+G L V + +GFV F E+ ++AV+
Sbjct: 569 SRVFVANLSSDETSEAELQELFSKYGNVLDTLVHHNR------YGFVQFSTEEEGRRAVE 408
Query: 250 EMNGKELNGKQI 261
MNG K++
Sbjct: 407 AMNGYMFYRKKL 372
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 296 LYVKNLD-DGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
++V NL D + L++ FS +G + V +GFV FS+ EE +AV MN
Sbjct: 563 VFVANLSSDETSEAELQELFSKYGNVLDTLV-----HHNRYGFVQFSTEEEGRRAVEAMN 399
Query: 355 GRIVATKPL 363
G + K L
Sbjct: 398 GYMFYRKKL 372
>03200
Length = 657
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -1
Query: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
+G +YV + G+ ++ L+ FS FG I + + R + GFV F E A +A+
Sbjct: 492 KGHTVYVHGI--GVTEDILKSAFSNFGNIVNINI----ERERNNGFVTFEKMESADQAIA 331
Query: 352 EMNGRIVATKPLYVALAQRK 371
MNG +++ L V +A+R+
Sbjct: 330 NMNGSMISNVQLKVMMARRQ 271
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = -1
Query: 115 LYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLND--RKVFVGR 172
L FS FGNI++ + + N GFV FE E+A++AI MNG ++++ KV + R
Sbjct: 444 LKSAFSNFGNIVNINIERERNN----GFVTFEKMESADQAIANMNGSMISNVQLKVMMAR 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Frame = -1
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
VY+ G + ++ LK F FG +++ + + + GFV+FE+ E A +A+ MN
Sbjct: 480 VYVHGIG--VTEDILKSAFSNFGNIVNINI-----ERERNNGFVTFEKMESADQAIANMN 322
Query: 253 GKELNGKQIYVGRAQKK 269
G ++ Q+ V A+++
Sbjct: 321 GSMISNVQLKVMMARRQ 271
>03059
Length = 1154
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = -2
Query: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD--ESGKSKGFGFVSFERHEDAQKAV 248
T V++ +++ + ++E+F +G + + D SKG +V +E EDA+KAV
Sbjct: 670 TKVHVGRLTRNVNKDHIQEIFSLYGTIKFIDLPNDRIHPNTSKGHAYVEYENPEDAEKAV 491
Query: 249 DEMNGKELNGKQI 261
M+G +++G++I
Sbjct: 490 KYMDGGQIDGQEI 452
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -2
Query: 5 APSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMIT-RRSLGYAYVNFQQPA 63
+P+ ++VG L +V + + E FS G I I + D I S G+AYV ++ P
Sbjct: 688 SPTPKPTKVHVGRLTRNVNKDHIQEIFSLYGTIKFIDLPNDRIHPNTSKGHAYVEYENPE 509
Query: 64 DAERALDTMNFDVIKGKPV 82
DAE+A+ M+ I G+ +
Sbjct: 508 DAEKAVKYMDGGQIDGQEI 452
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -2
Query: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEATKAV 350
++V L ++ + +++ FS +GTI + + SKG +V + +PE+A KAV
Sbjct: 670 TKVHVGRLTRNVNKDHIQEIFSLYGTIKFIDLPNDRIHPNTSKGHAYVEYENPEDAEKAV 491
Query: 351 TEMNG 355
M+G
Sbjct: 490 KYMDG 476
>15371
Length = 383
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -2
Query: 293 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSP 343
G NL++ +L D+ L + F PFG + SAKV ++ SK FGFV + SP
Sbjct: 160 GANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSP 2
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = -2
Query: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFET 147
N+FI +L + ++ L F FGN++S KV D+ N SK +GFV +++
Sbjct: 154 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDS 5
>02091
Length = 2031
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = -2
Query: 539 VQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLH-ML 597
QGQ A+ +A A PQ Q QM+GE+LF L+ +P T +L+ DNSELL ML
Sbjct: 1406 CQGQN--EAATVAEAHPQVQTQMIGEQLFSLMSDXYP----YPTDXMLKFDNSELLRIML 1245
Query: 598 ESPESLRSKVDEAVAVL 614
E +S+ + D A+ +L
Sbjct: 1244 ECQQSVNYR-DAAMVML 1197
>25746
Length = 475
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Frame = +1
Query: 191 TNVYIKNFGEDMDDERLKELFGKFGPAL--------SVKVMTDESGKSKGFGFVSFERHE 242
T+VY+ D+ DE+ +EL K+G + +K+ + G KG G + + E
Sbjct: 73 THVYVSGLPSDLTDEQFQELMSKYGLIMFDPHTHKPKLKLYRNHDGTLKGDGLCCYIKQE 252
Query: 243 DAQKAVDEMNGKELNGKQIYVGRAQ 267
A++ ++G +++G I V RA+
Sbjct: 253 SVDLALNILDGSDVHGSTISVERAK 327
>35379
Length = 534
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = +1
Query: 118 TFSAFGNILSCK-----VVCDENGSKGYGFVHFETQEAAERAIEK-MNGMLLNDRKVFVG 171
FSAFG + K + C KGYGFV FE QE A+R I+K + ++ DRK+ +G
Sbjct: 43 VFSAFGPVKDAK**QTELEC----PKGYGFVTFENQEDADRIIKKEADNLIFKDRKLNIG 210
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 210 LFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV-DEMNGKELNGKQIYVGRAQK 268
+F FGP K E KG+GFV+FE EDA + + E + +++ +G A +
Sbjct: 43 VFSAFGPVKDAK**QTELECPKGYGFVTFENQEDADRIIKKEADNLIFKDRKLNIGPAVR 222
Query: 269 K 269
K
Sbjct: 223 K 225
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 314 FSPFGTITSAKV-MMEGGRSKGFGFVCFSSPEEATKAV-TEMNGRIVATKPLYVALAQRK 371
FS FG + AK E KG+GFV F + E+A + + E + I + L + A RK
Sbjct: 46 FSAFGPVKDAK**QTELECPKGYGFVTFENQEDADRIIKKEADNLIFKDRKLNIGPAVRK 225
Query: 372 E 372
+
Sbjct: 226 Q 228
>00556
Length = 2189
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
+++ + ++++KEL FGP S ++ D +G SKGF F + +A +
Sbjct: 765 IFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTDQACAGL 944
Query: 252 NGKELNGKQIYVGRA 266
NG +L K++ V RA
Sbjct: 945 NGMQLGDKKLIVQRA 989
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 36/197 (18%)
Frame = +3
Query: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158
IF+ L + + + +FG + S +V D SKG+ F + ++A +
Sbjct: 765 IFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTDQACAGL 944
Query: 159 NGMLLNDRKVFVGRFKSRKEREAELGAR-AKEFTNVYIKNFGEDMDDE------------ 205
NGM L D+K+ V R A +GA+ A V ++ G +++ E
Sbjct: 945 NGMQLGDKKLIVQR--------ASIGAKGAMNQAPVQLQVPGLNLNQEIVQATEILCLMN 1100
Query: 206 ------------------RLKELFGKFGPALSVKVMTDESG-KSKGFG--FVSFERHEDA 244
+KE GK+G S+++ G + G G FV F D
Sbjct: 1101MIMPEELEDEEEYEDILEXVKEECGKYGSVRSLEIPRPIKGVEVPGVGKIFVEFNSILDC 1280
Query: 245 QKAVDEMNGKELNGKQI 261
QKA + G++ + + +
Sbjct: 1281QKAQQALAGRKFSSRVV 1331
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
+++G L ++E + E GP+ S + RD T S G+A+ + P+ ++A +
Sbjct: 765 IFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTDQACAGL 944
Query: 73 N 73
N
Sbjct: 945 N 947
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEM 353
+++ L + ++++++ FG + S ++ + G SKGF F + P +A +
Sbjct: 765 IFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTDQACAGL 944
Query: 354 NGRIVATKPLYV 365
NG + K L V
Sbjct: 945 NGMQLGDKKLIV 980
>33516
Length = 449
Score = 42.0 bits (97), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 169 FVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-S 227
F F +++ +G R +E +++ D D + L+ F +FG VM ++ +
Sbjct: 91 FAIYFGENSKKQFNMGGR-EEPGKIFVGGLSWDTDQDSLQGYFSQFGEITDCIVMMNQQT 267
Query: 228 GKSKGFGFVSFE 239
GKS+GFGFVSF+
Sbjct: 268 GKSRGFGFVSFK 303
Score = 42.0 bits (97), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSP 343
++V L D + L+ FS FG IT VMM + G+S+GFGFV F P
Sbjct: 160 IFVGGLSWDTDQDSLQGYFSQFGEITDCIVMMNQQTGKSRGFGFVSFKDP 309
>03903
Length = 983
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Frame = -1
Query: 229 KSKGFGFVS--FERHEDAQKAVDEMNGKE---LNGKQIYVGRAQKKVERQTELKRKFEQM 283
+S GFG ++ + ED + DE E ++ ++ GR + + + R +++
Sbjct: 647 QSTGFGVLAPAAKXQEDHEANDDEEGWSETKFISRSELRKGRLSXREMEEISVFRNYKEG 468
Query: 284 KQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPF--------GTITSAKVMMEGGRSKGF 335
+ R LY+KNL + +E L F + +I ++M EG R KG
Sbjct: 467 EPSR-------RLYIKNLSKQVTEEDLHWVFGRYVNWDKEEEKSIFDIRLMKEG-RMKGQ 312
Query: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
FV + E+A KAV + N + KP+ V A+
Sbjct: 311 AFVTLGTEEQARKAVKDTNAFVFKGKPIAVHFAR 210
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Frame = -1
Query: 193 VYIKNFGEDMDDERLKELFGKF--------GPALSVKVMTDESGKSKGFGFVSFERHEDA 244
+YIKN + + +E L +FG++ +++M + G+ KG FV+ E A
Sbjct: 452 LYIKNLSKQVTEEDLHWVFGRYVNWDKEEEKSIFDIRLMKE--GRMKGQAFVTLGTEEQA 279
Query: 245 QKAVDEMNGKELNGKQIYV 263
+KAV + N GK I V
Sbjct: 278 RKAVKDTNAFVFKGKPIAV 222
>02347
Length = 928
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = -3
Query: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
+YVGDL PD +E + F+ G + ++ + R G+A+V F+ DA+ A+
Sbjct: 746 GKIYVGDLPPDASEKEVERAFNYYGHLRNV-----WVARNPPGFAFVEFEDTRDADDAVR 582
Query: 71 TMNFDVIKGKPVRI 84
++ V+ G VR+
Sbjct: 581 ALDGTVVCGNRVRV 540
>29364
Length = 1126
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 232 GFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
G+GFV FE + DA AV E+NGKEL G+++ V
Sbjct: 70 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 165
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 139 GYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
GYGFV FE A+ A+ ++NG L +V V
Sbjct: 70 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 165
>32386
Length = 674
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Frame = +1
Query: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERH 241
L A++F ++I + D++ L+ F +G + VM D + K S+GFGF++++
Sbjct: 277 LDPNAEQFRKLFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDA 456
Query: 242 EDAQKAV----DEMNGKELNGKQIYVGRAQKKVERQTELKRKF 280
E +A +++G+E++ K+ + E Q +K+ F
Sbjct: 457 ESIDQAQANRPHKIDGREVDTKRAMPREESGRSEVQQSVKKMF 585
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVT-- 351
L++ L D++ LR F +G I VM + RS+GFGF+ + E +A
Sbjct: 307 LFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQAQANR 486
Query: 352 --EMNGRIVATK 361
+++GR V TK
Sbjct: 487 PHKIDGREVDTK 522
>24983
Length = 433
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = -2
Query: 204 DERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMN----GKELNG 258
D L+E F KFG V+TD ++GKS+G+GFV+ A +A + N G++ N
Sbjct: 276 DHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFVTMADRTGADRACKDPNPIIDGRKANV 97
Query: 259 KQIYVG 264
Y+G
Sbjct: 96 NLAYIG 79
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 112 NKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGML 162
+ +L + F FG+I V+ D S+GYGFV + A+RA + N ++
Sbjct: 276 DHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFVTMADRTGADRACKDPNPII 118
>09736
Length = 1319
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -2
Query: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
KV+ D SGKSKGFGFV F D Q+A+ EM
Sbjct: 1300 AKVVLDASGKSKGFGFVRFSEENDQQRALVEM 1205
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = -2
Query: 319 TITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRI-VATKPLYVALAQRKEERQA 376
++ AKV+++ G+SKGFGFV FS + +A+ EM + +P+ V LA K
Sbjct: 1312 SVRGAKVVLDASGKSKGFGFVRFSEENDQQRALVEMQHMTGIGRRPIKVGLAAPKRGHGF 1133
Query: 377 H 377
H
Sbjct: 1132 H 1130
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -2
Query: 125 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML-LNDRKVFVG 171
+ KVV D +G SKG+GFV F + +RA+ +M M + R + VG
Sbjct: 1309 VRGAKVVLDASGKSKGFGFVRFSEENDQQRALVEMQHMTGIGRRPIKVG 1163
>03406
Length = 1292
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Frame = +3
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEM 251
+++ + + L+E F KFG S + TD +SGKS+GFGFV F+ V
Sbjct: 246 IFVGGLSWETXSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKEAATVDAVVKNK 425
Query: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
K L G++I A + + M++ ++V LD G+ E +
Sbjct: 426 EHK-LQGRKIDPKPANPR-----------KGMRK----------IFVGKLDPGVPQEDVE 539
Query: 312 KEFSPFGTITSAKVMMEGGRS--KGFGFVCFSSPEEATKAVTEMNGRI 357
F+ FG + + ++ + + + F FV F + + K + + + +I
Sbjct: 540 SYFAKFGKVVNVELPYDKVKDQRRAFCFVEFDNDKTVKKVLEQTSHKI 683
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +3
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSA--KVMMEGGRSKGFGFVCFSSPEEATKAVT-- 351
++V L + LR+ F FG +TS K ++ G+S+GFGFV F V
Sbjct: 246 IFVGGLSWETXSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKEAATVDAVVKNK 425
Query: 352 --EMNGRIVATKP 362
++ GR + KP
Sbjct: 426 EHKLQGRKIDPKP 464
>02809
Length = 1475
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = -1
Query: 185 ARAKEFT---NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241
+R ++F+ VY+ G + L++ F K+GP +V V + GF FV FE +
Sbjct: 1361 SRHRDFSLDCKVYVGELGHGCAKQELEDKFAKYGPLKNVWVAR----RPAGFAFVEFEDN 1194
Query: 242 EDAQKAVDEMNG 253
DA+ AV ++G
Sbjct: 1193 RDAEDAVQALDG 1158
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = -1
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
+YVG+L + L +KF+ GP+ ++ + RR G+A+V F+ DAE A+ +
Sbjct: 1328 VYVGELGHGCAKQELEDKFAKYGPLKNV-----WVARRPAGFAFVEFEDNRDAEDAVQAL 1164
Query: 73 N 73
+
Sbjct: 1163 D 1161
>15503
Length = 570
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = +1
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
+Y+KN + E + ++FGK+G ++V + ++KG FV +E DA+ A D ++
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIRV--GNTPETKGTAFVVYEDIFDAKNACDHLS 327
Query: 253 GKELNGKQIYV-----GRAQKKVERQTELKRKFEQMK 284
G + + + V RA KK++ + K + ++MK
Sbjct: 328 GFNVCNRYLVVLYYQSTRAFKKLDTDKK-KEELDKMK 435
Score = 33.9 bits (76), Expect = 0.20, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +1
Query: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
+++KNL I + +YD F +G I + V + +KG FV +E A+ A + ++G
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIR-VGNTPETKGTAFVVYEDIFDAKNACDHLSG 330
Query: 161 MLLNDRKVFVGRFKSRK 177
+ +R + V ++S +
Sbjct: 331 FNVCNRYLVVLYYQSTR 381
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +1
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
LYV +L +T +Y+ F G I IRV T + G A+V ++ DA+ A D +
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIRVGN---TPETKGTAFVVYEDIFDAKNACDHL 324
Query: 73 NFDVIKGKPVRIMWSQRDPSLRK 95
+ + + + +++ Q + +K
Sbjct: 325 SGFNVCNRYLVVLYYQSTRAFKK 393
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
LYVKNL I E + F +G I +V +KG FV + +A A ++G
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIRV-GNTPETKGTAFVVYEDIFDAKNACDHLSG 330
Query: 356 RIVATKPLYVALAQ 369
V + L V Q
Sbjct: 331 FNVCNRYLVVLYYQ 372
>26197
Length = 1365
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSF 238
+++ + + L+E F KFG S + TD +SGKS+GFGFV F
Sbjct: 1292 IFVGGLSWETSSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVF 1152
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = -2
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSA--KVMMEGGRSKGFGFVCFSSPEEATKAVT-- 351
++V L + LR+ F FG +TS K ++ G+S+GFGFV F V
Sbjct: 1292 IFVGGLSWETSSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKEAVTVDAVVKNK 1113
Query: 352 --EMNGRIVATKP 362
++ GR + KP
Sbjct: 1112 EHKLQGRKIDPKP 1074
>04988
Length = 705
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -3
Query: 232 GFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQ 267
G+GFV FE DA AV E+NGK+L G+++ + A+
Sbjct: 550 GYGFVEFEDFRDADDAVYELNGKDLCGERVIIEHAR 443
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = -3
Query: 293 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 352
G +Y+ L ++ + + F +G + +M++ G+GFV F +A AV E
Sbjct: 655 GTRVYIGRLPYQAREKDIERFFRGYGRVND--IMLK----NGYGFVEFEDFRDADDAVYE 494
Query: 353 MNGRIVATKPLYVALAQ 369
+NG+ + + + + A+
Sbjct: 493 LNGKDLCGERVIIEHAR 443
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 139 GYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
GYGFV FE A+ A+ ++NG L +V +
Sbjct: 550 GYGFVEFEDFRDADDAVYELNGKDLCGERVII 455
>23720
Length = 739
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -1
Query: 232 GFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQ 267
G+GFV FE DA AV E+NGK+L G+++ + A+
Sbjct: 583 GYGFVEFEDFRDADDAVYELNGKDLCGERVIIEHAR 476
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 139 GYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
GYGFV FE A+ A+ ++NG L +V +
Sbjct: 583 GYGFVEFEDFRDADDAVYELNGKDLCGERVII 488
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = -1
Query: 293 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 352
G +Y+ L ++ + + F +G + +M++ G+GFV F +A AV E
Sbjct: 688 GTRVYIGRLPYQAREKDIERFFRGYGRVND--IMLK----NGYGFVEFEDFRDADDAVYE 527
Query: 353 MNGRIVATKPLYVALAQ 369
+NG+ + + + + A+
Sbjct: 526 LNGKDLCGERVIIEHAR 476
>08670
Length = 1307
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%)
Frame = +2
Query: 1 MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ 60
M+P P + +L+VG++ P VTE L + F+ GP+ S+R+ + A++N++
Sbjct: 926 MDPKNPEG-LTALWVGNVLPQVTEKRLTQMFAKHGPVASVRMLPEKYC------AFINYK 1084
Query: 61 QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIK 104
A RA+ + +G+ + I R P + GNI ++
Sbjct: 1085 LKESAGRAMQYLQNQECEGQHLLI----RFPDNPINPTGNITLR 1204
>03097
Length = 1401
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 200 EDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
+D +E EL K+G + + + G +V F + EDA KAV ++N + NG+
Sbjct: 145 DDFFEEIFIELAEKYGEIEEMNICDNLGDHLVGNVYVKFRKEEDADKAVADLNNRWFNGR 324
Query: 260 QIY 262
IY
Sbjct: 325 PIY 333
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 329 GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376
G G +V F E+A KAV ++N R +P+Y L + R+A
Sbjct: 226 GDHLVGNVYVKFRKEEDADKAVADLNNRWFNGRPIYAELTPVTDFREA 369
>10194
Length = 1278
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -3
Query: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
S++VG+L D+ E + F G + +IRV RD T G Y+ F+ AL
Sbjct: 403 SVFVGNLPFDIEEESVRSHFEDCGDVENIRVVRDRKTNLGKGICYILFKSADSVSLALKL 224
Query: 72 MNFDVIK 78
N ++ K
Sbjct: 223 NNSELEK 203
>28372
Length = 398
Score = 37.0 bits (84), Expect = 0.024, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -2
Query: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
+GFGFV+F +A++A D+MNG + G++I V
Sbjct: 259 QGFGFVTFAHSAEAERARDKMNGTVVEGRKIEV 161
Score = 35.4 bits (80), Expect = 0.062, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
+G+GFV F AERA +KMNG ++ RK+ V
Sbjct: 259 QGFGFVTFAHSAEAERARDKMNGTVVEGRKIEV 161
Score = 32.0 bits (71), Expect = 0.71, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
+GFGFV F+ EA +A +MNG +V + + V
Sbjct: 259 QGFGFVTFAHSAEAERARDKMNGTVVEGRKIEV 161
>12096
Length = 1585
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = -3
Query: 202 MDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
++++ ++EL P V+ M +G S+GFGFV F+ +AQ+ +D G+
Sbjct: 1187 VENDIIQELIRIGMPPKDVRFMRRVTGASRGFGFVEFQSQSEAQRWMDHNQGQ 1029
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIV 358
G S+GFGFV F S EA + + G++V
Sbjct: 1109 GASRGFGFVEFQSQSEAQRWMDHNQGQVV 1023
>05273
Length = 1009
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 204 DERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVS 237
D L+E F KFG V+TD ++GKS+G+GFV+
Sbjct: 160 DHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFVT 56
>31618
Length = 716
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Frame = +1
Query: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNF-------QQPADA 65
L+VG L + TE L + F G I SI V D T RS G+A++ F Q A
Sbjct: 298 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSAAE 477
Query: 66 ERALDTMNFDVIKGKP-------VRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDT 118
E +++ D K KP + + QR ++RKS ++ NLD
Sbjct: 478 EHIINSKKVDP-KKKPRLAMARFLSVA*PQR-LAMRKSKPTSV---NLD----------- 609
Query: 119 FSAFGNILSCKVVCDENGS--KGYGFVHFETQEAA 151
NI+ ++ D+ S KG+ F+ F++++
Sbjct: 610 -----NIVEVEMPFDKQKSHRKGFXFITFDSEQVV 699
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
L+V L ++ LR F +G I S V + GRS+GF F+ F++ EA V+
Sbjct: 298 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNT-EAIDQVSAA 474
Query: 354 NGRIVATKPL 363
I+ +K +
Sbjct: 475 EEHIINSKKV 504
>39789
Length = 361
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +1
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
+++ N D D LK+ F A K ++ K +GFGFV F +DA A D
Sbjct: 94 LFVGNLSYDTDQYSLKDAFPGATAARIAKFQ--DTQKPRGFGFVEFSTPDDAASAFDSGE 267
Query: 253 GKELNGKQI 261
+E++G+Q+
Sbjct: 268 -REVDGRQV 291
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT---- 351
L+V NL D L+ F P T + + +GFGFV FS+P++A A
Sbjct: 94 LFVGNLSYDTDQYSLKDAF-PGATAARIAKFQDTQKPRGFGFVEFSTPDDAASAFDSGER 270
Query: 352 EMNGRIV 358
E++GR V
Sbjct: 271 EVDGRQV 291
>00781
Length = 3170
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 296 LYVKNLDDGIDDERLRKEFSPFGTIT--SAKVMMEGGRSKGFGFVCFSSPEEATKAVTEM 353
+YV+ E + + FS GT+T S KG+ FV F SPEEA KAV +
Sbjct: 2714 VYVEGFHKFTSREWISRMFSKCGTVTYVSLPCFKTTREIKGYAFVEFQSPEEAVKAVQML 2535
Query: 354 N 354
N
Sbjct: 2534 N 2532
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -1
Query: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKS-KGFGFVSFERHEDAQKAVDEM 251
VY++ F + E + +F K G V + ++ + KG+ FV F+ E+A KAV +
Sbjct: 2714 VYVEGFHKFTSREWISRMFSKCGTVTYVSLPCFKTTREIKGYAFVEFQSPEEAVKAVQML 2535
Query: 252 N 252
N
Sbjct: 2534 N 2532
>25950
Length = 417
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 284 KQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFS 341
KQ+ TR ++YV N+D G E L F GTI ++ G KGF ++ F
Sbjct: 299 KQEIDTR----SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFG 132
Query: 342 SPE 344
S E
Sbjct: 131 SKE 123
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = -2
Query: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
S+YVG++ + L F G I + + + G+AY+ F E AL
Sbjct: 278 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETAL-A 102
Query: 72 MNFDVIKGKPVRIM 85
MN + +G+ +++M
Sbjct: 101 MNETLFRGRQIKVM 60
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -2
Query: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYGFVHFETQEAAERAIEK 157
++++ N+D + L F G I ++C++ KG+ ++ F ++E E A+
Sbjct: 278 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETAL-A 102
Query: 158 MNGMLLNDRKVFV 170
MN L R++ V
Sbjct: 101 MNETLFRGRQIKV 63
>32733
Length = 709
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 119 FSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMN 159
F +FG+I C V+ D NG S+G F+ F +++ A +I+ M+
Sbjct: 526 FESFGSIDDCTVLRDSNGTSRGCAFITFASRQCAMNSIKGMH 651
>25632
Length = 864
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 118 TFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
+G + C V+ K YGFVH T+ A AI +NG + +++ V
Sbjct: 710 CLEKYGTVEECDVL------KNYGFVHMPTKSEASAAITNLNGYNIKGQRMRV 570
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 317 FGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
+GT+ V+ K +GFV + EA+ A+T +NG + + + V L+ K
Sbjct: 698 YGTVEECDVL------KNYGFVHMPTKSEASAAITNLNGYNIKGQRMRVELSTNK 552
>11579
Length = 1307
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 51 SLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 88
S G+A+V F DAE A+D+M+ ++ G+ VR ++
Sbjct: 3 SRGFAFVRFYDRRDAEDAMDSMDGALLDGREVRCQMAR 116
>23655
Length = 929
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -3
Query: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
+GF FV+F H+ KAV + +LNG+Q+ V +AQ K
Sbjct: 783 QGFCFVTFGDHDSVDKAVLKKR-HDLNGRQVEVKKAQSK 670
>30934
Length = 809
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 16/203 (7%)
Frame = +1
Query: 34 AGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIM----WSQR 89
GP+ + + D IT++ G+A+V F P A +A ++ +G+ + I+ +Q+
Sbjct: 25 GGPVTDLDLPVDPITKKIKGFAHVTFMFPEHAVKARMELDRQGFRGRMLHILPGKDRTQK 204
Query: 90 DPSLRKSGVGNI---FIKNLDKSIDN-KALYDTFSAFGNILSCKVVCDEN--------GS 137
S KS + K L KS N L+ + A ++ K D++ GS
Sbjct: 205 YVSHEKSSYKKLKDEKTKALVKSSHNWNTLFLSGDAVATAMATKYXADKSDILDDSGKGS 384
Query: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKN 197
G ETQ E L D V + F +A+ GAR+K T + K+
Sbjct: 385 LGVRMALGETQLVQE------TRQFLIDNGVALDSFS-----QAD-GARSK--TVIIAKD 522
Query: 198 FGEDMDDERLKELFGKFGPALSV 220
+ + L E+F K+G V
Sbjct: 523 LPAATESDXLTEVFSKYGTVARV 591
>11126
Length = 1061
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = -3
Query: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
+ S+YVG++ T L + F G + + + D + G+AYV F A
Sbjct: 633 LRSVYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKYSGHPKGFAYVEFADKDSVVTAK 454
Query: 70 DTMNFDVIKGKPVRI 84
T + +G+ +++
Sbjct: 453 CTGMDSLFRGRQIKV 409
>31265
Length = 540
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Frame = +2
Query: 53 GYAYVNF---QQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRK---SGVGNIFIKNL 106
G+A+V + + A A R L + G + + W++ + + + S V + ++NL
Sbjct: 5 GFAFVEYTSHRAAAMARRKLIPGRIQ-LWGHQIAVDWAEPEQDVDEDTMSQVKILXVRNL 181
Query: 107 DKSIDNKALYDTFS-AFGN--ILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 163
+ + L D FS A G I K + D Y FVHF ++E A +A++ +G +
Sbjct: 182 MLTTTEETLKDVFSRAAGGREIERVKKIRD------YAFVHFRSREDAIKAMDVTDGSTI 343
Query: 164 NDRKVFV 170
+V V
Sbjct: 344 EGSQVEV 364
>26275
Length = 896
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 144 HFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
H E Q RA E+M+ LL R VF+ + K+
Sbjct: 628 HLEEQAVKRRAKEEMDKKLLEQRAVFIEKAKT 723
>19556
Length = 917
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = -1
Query: 14 YVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADA-ERALDTM 72
++G L VTE L EKFS G + ++ + S +AYVN + ++
Sbjct: 821 FIGGLVKGVTEEELMEKFSRFGQVSNVDIKTRTNGIDSRTFAYVNLTAEENGFKKCFTAY 642
Query: 73 NFDVIKGKPVRIMWSQRD--PSLRKSGVGNIFIKNLDKS 109
N KG +++ +++ L+K +K+ +KS
Sbjct: 641 NNTKWKGGQLKLQYAKESSLSKLKKEQTEARLVKDKEKS 525
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|52345394|ref|NP_001004365.1| ARP3 actin-related
protein 3 homolog B [Mus musculus]
(418 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00608 596 e-171
19721 202 4e-97
13361 325 2e-89
04742 253 7e-68
39562 212 2e-55
12322 126 1e-29
02757 82 7e-29
36954 97 8e-21
01436 82 5e-16
17032 82 6e-16
32273 79 3e-15
11487 44 2e-11
18926 62 4e-10
28457 32 0.71
>00608
Length = 1930
Score = 596 bits (1536), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/337 (84%), Positives = 315/337 (93%)
Frame = +3
Query: 82 IVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYI 141
I++DWDLMERF EQV+FKYLRAEPEDHYFL+TEPPLNTPENREY AEIMFESFNVPGLYI
Sbjct: 3 IIDDWDLMERFYEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI 182
Query: 142 AVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
AVQAVLALAASWTSR VGERTLTG VIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT
Sbjct: 183 AVQAVLALAASWTSRNVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 362
Query: 202 YFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVREFAKYDVDPRKWIKQYTGINA 261
YFIQQLLREREVGIPPEQSLETAKAIKE++ Y+CPDI +EF+KYD DP KW+K+Y G N
Sbjct: 363 YFIQQLLREREVGIPPEQSLETAKAIKERFSYVCPDIAKEFSKYDTDPSKWMKKYEGRNT 542
Query: 262 INQKKFIIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQSCPIDVRRPLYKNVVL 321
I+++ F +DVGYERFLGPEIFFHPEF+NPDF ISDVVD+VIQ+CPIDVRR LYKN+VL
Sbjct: 543 ISKQLFSVDVGYERFLGPEIFFHPEFSNPDFTMPISDVVDDVIQNCPIDVRRGLYKNIVL 722
Query: 322 SGGSTMFRDFGRRLQRDLKRVVDARLKLSQELSGGRIKPKPVEVQVVTHHMQRYAVWFGG 381
SGGSTMFRDFGR++QRD+KRVVD RLK S+ELS GRIKPKP+EVQV+THHMQRYAVWFGG
Sbjct: 723 SGGSTMFRDFGRKIQRDVKRVVDGRLKASEELSQGRIKPKPIEVQVITHHMQRYAVWFGG 902
Query: 382 SMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 418
SMLASTPEF+QVCHTK DY+E+GPSICRHNPVFG M+
Sbjct: 903 SMLASTPEFYQVCHTKADYDEHGPSICRHNPVFGTMA 1013
>19721
Length = 757
Score = 202 bits (514), Expect(2) = 4e-97, Method: Compositional matrix adjust.
Identities = 104/121 (85%), Positives = 112/121 (92%)
Frame = +2
Query: 82 IVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYI 141
+VEDWDL ERFMEQ +FKYLRAEPEDHYFL+TEPPLNTPENRE+ AEIMFE+FN+PGLYI
Sbjct: 2 VVEDWDLHERFMEQAIFKYLRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNIPGLYI 181
Query: 142 AVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
AVQAVLALAASWTSR ERTLTG VIDSGDGVTHVIPV +GYVIGS IKHIPIAGRDIT
Sbjct: 182 AVQAVLALAASWTSRPPNERTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDIT 361
Query: 202 Y 202
+
Sbjct: 362 F 364
Score = 170 bits (431), Expect(2) = 4e-97, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 94/134 (70%)
Frame = +3
Query: 200 ITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVREFAKYDVDPRKWIKQYTGI 259
I++F + IPP+ S+E AK IKE+Y Y+CPDI +EFAKYD DP KWIK +
Sbjct: 354 ISHFHPAIATGTGTVIPPDMSMEAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKAHKMS 533
Query: 260 NAINQKKFIIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQSCPIDVRRPLYKNV 319
+ F DVGYE+FLGPE+FF PEF N DF SISDVVD VIQSCPID RRPLY N+
Sbjct: 534 GSSKYPDFSFDVGYEKFLGPEVFFRPEFVNGDFQASISDVVDTVIQSCPIDSRRPLYNNI 713
Query: 320 VLSGGSTMFRDFGR 333
VLSGGS+MF+ R
Sbjct: 714 VLSGGSSMFKHLDR 755
>13361
Length = 1217
Score = 325 bits (832), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 142/187 (75%), Positives = 166/187 (88%)
Frame = +3
Query: 232 CYICPDIVREFAKYDVDPRKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPD 291
CYICPDI +EFAKYD +P KWI+ YTG+N + ++ F +DVGYERFLGPEIFFHPEF+NPD
Sbjct: 42 CYICPDIAKEFAKYDSEPSKWIRNYTGMNTVTKQAFNVDVGYERFLGPEIFFHPEFSNPD 221
Query: 292 FMESISDVVDEVIQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQ 351
F +S++VD VIQ+CPIDVRR LY N+VLSGGSTMF+DFGRRLQRD+KR VD RL++S+
Sbjct: 222 FTIPLSEIVDNVIQNCPIDVRRHLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISE 401
Query: 352 ELSGGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHN 411
LS GRIKPKP++VQV+THHMQRYAVWFGGSMLASTPEF+QVCHTK YEEYGPSICRHN
Sbjct: 402 NLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYGPSICRHN 581
Query: 412 PVFGVMS 418
PVFG M+
Sbjct: 582 PVFGTMT 602
>04742
Length = 2111
Score = 253 bits (647), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 218/415 (52%), Gaps = 9/415 (2%)
Frame = +2
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V+D G+G K G+AG+ P+ + PS + + V+ G+ D ++GDEA
Sbjct: 119 VIDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSYVGDEAQS 274
Query: 69 KPTYAT-KWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLA 127
K T K+PI HGIV +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 275 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 454
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIG 187
+IMFE+FN P +Y+A+QAVL+L AS + TGIV+DSGDGV H +P+ EGY +
Sbjct: 455 QIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVXHTVPIYEGYALP 610
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVREFAKYDV 247
I + +AGRD+T ++ ++L ER E + IKEK CY+ D +E
Sbjct: 611 HAISRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM----- 775
Query: 248 DPRKWIKQYTGINAINQKKF------IIDVGYERFLGPEIFFHPEFANPDFMESIS--DV 299
Q ++ +K + +I +G ERF PE F P F MES +
Sbjct: 776 -------QTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLG---MESAGXHET 925
Query: 300 VDEVIQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELSGGRIK 359
I C +D+R+ LY N VLSGGSTM+ R+Q+++ +
Sbjct: 926 TYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIT----------------ALA 1057
Query: 360 PKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 414
P ++++++ ++Y+VW GGS+LAS F Q+ +K++Y+E GPSI H F
Sbjct: 1058PPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV-HRKCF 1219
>39562
Length = 1438
Score = 212 bits (539), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 178/335 (53%), Gaps = 2/335 (0%)
Frame = -2
Query: 82 IVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYI 141
IV +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+
Sbjct: 1437 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 1258
Query: 142 AVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
A+QAVL+L AS + TGIV+DSGDGVTH +P+ EGY + I + +AGRD+T
Sbjct: 1257 AIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 1102
Query: 202 YFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVREFAKYDVDPRKWIKQYTGINA 261
++ ++L ER E + IKEK Y+ D +E K Y +
Sbjct: 1101 DYLMKILTERGYSFTTTAEREIVRDIKEKLDYVALDFEQEMLT-AASSSSLEKSYELPDG 925
Query: 262 INQKKFIIDVGYERFLGPEIFFHPEFANPDFMES--ISDVVDEVIQSCPIDVRRPLYKNV 319
+I +G ERF PE F P F MES I + I C +D+R+ LY N
Sbjct: 924 Q-----VITIGNERFRCPEAMFQPSFLG---MESAGIHETTYNSIMKCDVDIRKDLYANT 769
Query: 320 VLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELSGGRIKPKPVEVQVVTHHMQRYAVWF 379
VLSGGSTM+ R+Q+++ + P ++++++ ++Y+VW
Sbjct: 768 VLSGGSTMYPGIADRMQKEIT----------------ALAPPTMKIKIIAPPERKYSVWI 637
Query: 380 GGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 414
GGS+LAS F Q+ +K++Y+E GPSI H F
Sbjct: 636 GGSILASLSTFQQMWISKQEYDESGPSIV-HRKCF 535
>12322
Length = 849
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 121/231 (52%)
Frame = +1
Query: 174 VTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCY 233
VTH +PV EG+ + I + +AGRD+T +++ LLR+ + + E K IKE+ CY
Sbjct: 1 VTHAVPVYEGFAMPHSIMRVDVAGRDVTRYLRLLLRKEGMDLHTTAEFEVVKHIKERTCY 180
Query: 234 ICPDIVREFAKYDVDPRKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDFM 293
+ + ++E + VD K N + +VG RF PE+ F P+ +
Sbjct: 181 LSINPLKEES---VDTEKVSYTLPDGNTV-------EVGPARFRAPELLFRPDLIGEE-C 327
Query: 294 ESISDVVDEVIQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQEL 353
E I +V+ IQ +D+R+ LY N+VLSGGST+F+ FG RL +LK++
Sbjct: 328 EGIHEVLSYSIQKSDVDLRKTLYSNIVLSGGSTLFKGFGDRLLSELKKLA---------- 477
Query: 354 SGGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYG 404
PK +++++ + Y+ W G S+LAS F ++ +K++Y E G
Sbjct: 478 ------PKDIKIRISAPQERLYSTWIGXSILASLDTFRKMWVSKREYHEEG 612
>02757
Length = 1094
Score = 81.6 bits (200), Expect(3) = 7e-29, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = -2
Query: 188 SCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVREFAKYDV 247
+ I + +AGRD+T ++ ++L ER E IKEK CY+ D +E A
Sbjct: 994 TAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVXDIKEKLCYVALDFEQEMATA-A 818
Query: 248 DPRKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDFMES--ISDVVDEVIQ 305
K Y + +I +G ERF PE F P F MES I + I
Sbjct: 817 SSSSLEKSYELPDG-----QVITIGNERFRCPESLFQPSFLG---MESAGIHETTYNSIM 662
Query: 306 SCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDL 339
C +D+R+ LY N VLSGG+TMF R+Q+++
Sbjct: 661 KCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEI 560
Score = 43.5 bits (101), Expect(3) = 7e-29, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = -3
Query: 363 VEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSI 407
++++ + ++Y+VW GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 537 MKIKXIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 403
Score = 40.0 bits (92), Expect(3) = 7e-29, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1
Query: 164 TGIVIDSGDGVTHVIPVAEGYVI 186
TGIV+DSGDGVTH +P+ EGY +
Sbjct: 1067 TGIVLDSGDGVTHTVPIYEGYAL 999
>36954
Length = 892
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Frame = -1
Query: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAID 68
V D G+ + GYAG P+ IP+ + + E + + + I +
Sbjct: 799 VFDIGSYSFRAGYAGEDTPKAEIPTHVGVMEDIETTMDTDGGDAPPQPEKKYLIDTVYMK 620
Query: 69 KPTYATKWP--IRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYL 126
P ++ G+VEDWD+ E+ ++ + +++E H LM+EP NT RE L
Sbjct: 619 HPRKGMHLNSFLKDGMVEDWDMFEKVIDYAYNRSIKSESCLHPLLMSEPAWNTKAKREKL 440
Query: 127 AEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVI 186
EIMFE +N+P ++ +VL+ A+ S T +++DSG T +PV +GYV+
Sbjct: 439 TEIMFEKYNIPAFFLRKNSVLSAFANGRS--------TALILDSGATHTSAVPVYDGYVL 284
Query: 187 GSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEK 230
I P+AG I L+ E+ + + P + + + + +K
Sbjct: 283 TQGIVKSPLAGDFIARECGLLMEEQNIEVVPPYLISSKEVVADK 152
>01436
Length = 2563
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Frame = +3
Query: 200 ITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVREFAKYDVDPRKWIKQYTGI 259
IT ++ +LL R ET + +KEK CY D+ +E K ++ ++ Y
Sbjct: 3 ITRYLIKLLLLRGYAFNHSADFETVRMLKEKLCYTAYDVEQE-QKLALETTVLVEPY--- 170
Query: 260 NAINQKKFIIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQSCPIDVRRPLYKNV 319
I +I VG ERF PE F P N D + +++++ IQ+ +D+R YK++
Sbjct: 171 --ILPDGRVIKVGGERFEAPEALFQPHLINVDGV-GVAELLFNTIQAADMDIRPDFYKHI 341
Query: 320 VLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELSGGRIKPKPVEVQVVTHHMQRYAVWF 379
VLSGGSTM+ RL+R++K +L L + L G + ++++ +++ V+
Sbjct: 342 VLSGGSTMYPGLPSRLEREIK-----QLYLERVLXGDTSRLSKFKIRIEDPPRRKHMVFL 506
Query: 380 GGSMLA----STPEFFQVCHTKKDYEEYGPSIC 408
GGS+ A +F+ + + +YEE G +
Sbjct: 507 GGSVXADIMKDKDDFWMM---RSEYEEMGVKVL 596
>17032
Length = 2938
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = -1
Query: 379 FGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 418
FGGSMLASTPEF+QVCHTK DY+E+GPSICRHNPVFG M+
Sbjct: 2938 FGGSMLASTPEFYQVCHTKADYDEHGPSICRHNPVFGTMA 2819
>32273
Length = 265
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = -2
Query: 73 ATKWPIRHGIVEDWDLMERFMEQVVFK-YLRAEPEDHYFLMTEPPLNTPENREYLAEIMF 131
+ ++P+ HGIV+DW+ MER + + K L+ E+H L+TE PLN NRE AEI F
Sbjct: 258 SIRYPMEHGIVKDWNDMERIWQYIYSKDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 79
Query: 132 ESFNVPGLYIAVQAVLALAAS 152
++FNVP L+I++QAVL+L A+
Sbjct: 78 DTFNVPALFISMQAVLSLYAT 16
>11487
Length = 771
Score = 43.9 bits (102), Expect(2) = 2e-11, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 304 IQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRD 338
I C +D+R+ LY N VLSGG+TMF R+Q++
Sbjct: 753 IMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKE 649
Score = 42.4 bits (98), Expect(2) = 2e-11, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = -2
Query: 373 QRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSI 407
++Y+VW GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 596 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 492
>18926
Length = 478
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +1
Query: 285 PEFANPDFME--SISDVVDEVIQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRV 342
P NP + VV + C ID+R LY V+ GG+++ + F RL RDL
Sbjct: 61 PSSRNPKATPVLGVGHVVTTSVGMCDIDIRPSLYGGVIAVGGNSLIQGFTERLNRDLSNK 240
Query: 343 VDARLKLSQELSGGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEE 402
++L + + +R++ W GGS+LAS F Q+ +K++YEE
Sbjct: 241 TPPSMRLKI-------------IAAASTAERRFSSWIGGSILASLGSFQQMWVSKQEYEE 381
Query: 403 YGPS 406
G S
Sbjct: 382 GGKS 393
>28457
Length = 926
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 271 VGYERF--LGPEIFFHPEFANPDFMESISDVVDEVIQSC 307
VGY R + P +FF P F+ P F S S + ++V++ C
Sbjct: 925 VGYLRHVPISPSLFFRPSFSXPLFTASSSKLREKVLEIC 809
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|13994195|ref|NP_114074.1| protein phosphatase 1,
catalytic subunit, alpha [Mus musculus]
(330 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01173 591 e-169
06264 573 e-164
19040 297 3e-81
08242 276 6e-75
18336 170 7e-61
06084 229 9e-61
04295 157 5e-39
25536 151 4e-37
21146 64 6e-11
30980 63 1e-10
36367 55 3e-08
18967 54 8e-08
17953 41 8e-04
26290 27 8.3
01222 27 9.5
>01173
Length = 2619
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/304 (94%), Positives = 293/304 (96%)
Frame = -1
Query: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
KNVQLTE+EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES
Sbjct: 2619 KNVQLTESEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 2440
Query: 86 NYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYN 145
NYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFLLRGNHECASINRIYGFYDECKRRYN
Sbjct: 2439 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 2260
Query: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205
IKLWKTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL
Sbjct: 2259 IKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 2080
Query: 206 WSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVT 265
WSDPDK+ GWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVT
Sbjct: 2079 WSDPDKETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVT 1900
Query: 266 LFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPPRNS 325
LFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK K YG GLN GRP+TPPR +
Sbjct: 1899 LFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPYG---GLNQ-GRPVTPPRGN 1732
Query: 326 AKAK 329
AKAK
Sbjct: 1731 AKAK 1720
>06264
Length = 999
Score = 573 bits (1476), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/296 (93%), Positives = 283/296 (95%)
Frame = -3
Query: 34 EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDY 93
EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDY
Sbjct: 997 EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDY 818
Query: 94 VDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFT 153
VDRG+QSLETICLLLAYKI+YPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFT
Sbjct: 817 VDRGRQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFT 638
Query: 154 DCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV 213
DCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+
Sbjct: 637 DCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKET 458
Query: 214 QGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC 273
GWGE+DRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC
Sbjct: 457 MGWGESDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC 278
Query: 274 GEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPPRNSAKAK 329
GEFDNAGAMMSVDETLMCSFQILKPADK K YG S GRP+TPPR +AKAK
Sbjct: 277 GEFDNAGAMMSVDETLMCSFQILKPADKKKFPYGGLS----XGRPVTPPRGNAKAK 122
>19040
Length = 452
Score = 297 bits (761), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 140/150 (93%), Positives = 145/150 (96%)
Frame = -3
Query: 36 RGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 95
RGLCLKSREIFL QPILLELEAPL ICGDIHGQY DLLRLFEYGGFPP +NYLFLGDYVD
Sbjct: 450 RGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYVD 271
Query: 96 RGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDC 155
RGKQSLETICLLLAYKI+YPENFFLLRGNHECASINRIYGFYDECKRRYN+KLWKTFTDC
Sbjct: 270 RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLWKTFTDC 91
Query: 156 FNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 185
FNCLP+AAI+DEKIFCCHGGLSPDLQ MEQ
Sbjct: 90 FNCLPVAAIIDEKIFCCHGGLSPDLQGMEQ 1
>08242
Length = 3368
Score = 276 bits (707), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 128/257 (49%), Positives = 185/257 (71%), Gaps = 1/257 (0%)
Frame = -1
Query: 44 EIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLET 103
EI + + + +++P+ +CGDIHGQ+YDL LF+ GG P++NYLF+GD+VDRG S+ET
Sbjct: 3368 EILVEESNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPDTNYLFMGDFVDRGFYSVET 3189
Query: 104 ICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIA 162
LLLA K+RYP+ L+RGNHE I ++YGFYDEC R+Y +I +W+ T+ F+ L ++
Sbjct: 3188 FLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLS 3009
Query: 163 AIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRG 222
AI+D KIFC HGGLSP +Q+++QIR I R +VP G +CDLLWSDP+ D+QGWG + RG
Sbjct: 3008 AIIDGKIFCVHGGLSPSIQTLDQIRSIDRKQEVPHDGPMCDLLWSDPE-DMQGWGVSPRG 2832
Query: 223 VSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAM 282
+ FG++VV++F + +DLICRAHQ+V +GY++ ++T++SAPNYC N A+
Sbjct: 2831 AGYLFGSDVVSQFNAANXIDLICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAI 2652
Query: 283 MSVDETLMCSFQILKPA 299
+ +DE L F I + A
Sbjct: 2651 LELDEHLQRDFTIFEAA 2601
>18336
Length = 465
Score = 170 bits (430), Expect(3) = 7e-61, Method: Compositional matrix adjust.
Identities = 85/111 (76%), Positives = 90/111 (81%)
Frame = +2
Query: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
KNVQL+E + SR I L + + ICGDIHGQYYDLLRLFEYGGFPPES
Sbjct: 2 KNVQLSEQK*EAYV*ISRNI-LESAYSFRIRSTT*ICGDIHGQYYDLLRLFEYGGFPPES 178
Query: 86 NYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGF 136
NYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFLLRGNHECASINRIYGF
Sbjct: 179 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 331
Score = 74.3 bits (181), Expect(3) = 7e-61, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +1
Query: 137 YDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIF 170
YDECKRRYNIKLWKTFTDCFNCLPIAAI+D KIF
Sbjct: 331 YDECKRRYNIKLWKTFTDCFNCLPIAAIIDVKIF 432
Score = 28.9 bits (63), Expect(3) = 7e-61, Method: Compositional matrix adjust.
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 170 FCCHGGLSPDLQ 181
CCHGGLSPDLQ
Sbjct: 429 LCCHGGLSPDLQ 464
>06084
Length = 1739
Score = 229 bits (585), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 165/262 (62%), Gaps = 1/262 (0%)
Frame = -2
Query: 66 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNH 125
HGQ+YDL+ LF+ GG P++NY+F+GD+VDRG SLET LLL K ++P+ LLRGNH
Sbjct: 1738 HGQFYDLMELFKTGGEMPDTNYVFMGDFVDRGYFSLETFTLLLTLKAKWPDKIVLLRGNH 1559
Query: 126 ECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSME 184
E I +IYGFYDEC+ +Y N W+ F+ L IAAI+DE I C HGGLSPD+++++
Sbjct: 1558 ESRQITQIYGFYDECQTKYGNANAWRYCCRVFDLLTIAAIIDECILCVHGGLSPDIKTID 1379
Query: 185 QIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLI 244
QIR I R ++P +G CDL+WSDP+ DV W + RG + FGA+V A+F+ ++L LI
Sbjct: 1378 QIRTIERNQEIPHKGAFCDLVWSDPE-DVDTWAMSPRGAGWLFGAKVTAEFVASNNLKLI 1202
Query: 245 CRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKG 304
CRAHQ+V +GY++ +LVT++SAPNYC N A++S + ++ K
Sbjct: 1201 CRAHQLVHEGYKYMFDEKLVTVWSAPNYCYRCGNIAAVLSFTDAEHHEAKLFKAV----- 1037
Query: 305 KYGQFSGLNPGGRPITPPRNSA 326
P + PPR
Sbjct: 1036 ---------PDSERVIPPRTQT 998
>04295
Length = 748
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = -1
Query: 229 AEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDET 288
+VV+KFL++HDLDLI RAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDET
Sbjct: 748 GDVVSKFLNRHDLDLITRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDET 569
Query: 289 LMCSFQILKPADKNKGKYGQFSGLNPGGRPITPPR 323
LMCSFQILKP++K K KY Q+ GLN GRPITPP+
Sbjct: 568 LMCSFQILKPSEK-KAKY-QYGGLN-SGRPITPPK 473
>25536
Length = 486
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
Frame = +1
Query: 29 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 88
QL+EN+++ LC K++EI + + E++ P+ +CGD+HGQ++DL+ LF GG P++NYL
Sbjct: 106 QLSENQVKTLCEKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 285
Query: 89 FLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 147
F+GDYVDRG S+ET+ LL+A K+R+ + +LRGNHE I ++YGFYDEC R+Y N
Sbjct: 286 FMGDYVDRGYYSVETVSLLVALKVRFRDRITILRGNHESRQITQVYGFYDECLRKYGNAN 465
Query: 148 LWKTFTD 154
+WK FTD
Sbjct: 466 VWKYFTD 486
>21146
Length = 408
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +3
Query: 198 QGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQ-VVEDGYE 256
QG +CDLLWSDPD D GWG + RG +TFG ++ F H + L LI RAHQ V+E +
Sbjct: 114 QGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHSNGLTLISRAHQLVMEVMFW 290
Query: 257 FFAKRQLVTLF--SAPNY 272
F Q L+ S NY
Sbjct: 291 FVTGMQTCLLYELSLQNY 344
>30980
Length = 765
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = +3
Query: 234 KFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSF 293
F H + L LI RAHQ+V +GY + R +VT+FSAPNYC N A+M +D+ L SF
Sbjct: 3 TFNHSNGLTLISRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDALKYSF 182
Query: 294 QILKPADK 301
PA +
Sbjct: 183 LQFDPAPR 206
>36367
Length = 827
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Frame = +1
Query: 173 HGGL-SPDLQS---MEQIRRIMRPTDVP--DQGLLCDLLWSDPD-------------KDV 213
HGG+ SP+ + +E I +I P P D + ++LWSDP K+
Sbjct: 1 HGGIPSPENEGGGHLEAINKIPVPLSDPEVDSPMAWEILWSDPISVDLVSPEVLKDMKEH 180
Query: 214 QGWGENDR-GVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNY 272
G+ N R G + F + FL ++ L + RAH+V E G++ + +L+T+FS+ Y
Sbjct: 181 HGFTFNSRRGTAHFFSCNALLAFLERNGLSHVIRAHEVQEVGFQVQQQGKLLTVFSSSRY 360
Query: 273 CGEFDNAGAMMS 284
CG + A +++
Sbjct: 361 CGGSNEAACVLA 396
>18967
Length = 440
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = +2
Query: 241 LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVD 286
LDLICRAHQ+V +G ++ + +LVT++SAPNYC N A++S +
Sbjct: 2 LDLICRAHQLVNEGIKYMFEGKLVTVWSAPNYCYRCGNVAAILSFE 139
>17953
Length = 626
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = -2
Query: 236 LHKHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPNYCGEFDNAGAMMSV 285
L +++L I RAH+ + GY + K Q L+T+FSAPNY ++N ++S
Sbjct: 625 LQQNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKVQLLST 458
>26290
Length = 559
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 6/97 (6%)
Frame = -2
Query: 85 SNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGN--HECASINRIYGFYDECKR 142
SN LFL V + L ++C + + +R EN F N H + + + D
Sbjct: 537 SNLLFLVLDVFKNVSGLWSVCKMKGFPVRNRENLFSPHTNAKHSLSMVEYFFSLSDSFLL 358
Query: 143 RYNIKLWKTFTDCFNCLP----IAAIVDEKIFCCHGG 175
Y K C P +A++ K FC G
Sbjct: 357 AYMXG*SKPSCSCMRTAPMPVELASVRTTKSFCRSGN 247
>01222
Length = 744
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 119 FLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP-IAAIVDEKIFCC 172
F + NH C S ++Y + + NIKLW + C+ + V+E++F C
Sbjct: 707 FTIHSNHICRSRRKLYTEINPQHVKINIKLWHPTQFFYLCIMYVCRRVNEQVFVC 543
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|46195798|ref|NP_031864.2|
dolichyl-di-phosphooligosaccharide-protein glycotransferase [Mus
musculus]
(441 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07294 591 e-169
02987 30 2.1
02457 29 3.8
>07294
Length = 1339
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/408 (68%), Positives = 342/408 (83%)
Frame = +3
Query: 28 SGPRTLVLLDNLNVRDTHSLFFRSLKDRGFELTFKTADDPSLSLIKYGEFLYDNLIIFSP 87
+G RTLVL+DN ++R++HS+FFR+L+D GF+LTFK+ADD SL+L+KYGEFLYDNL+IFSP
Sbjct: 84 AGKRTLVLVDNWSIRESHSIFFRNLRDSGFDLTFKSADDGSLALVKYGEFLYDNLVIFSP 263
Query: 88 SVEDFGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTAVIDHHNY 147
SVE+FGG ++V I+ FIDGGG+VLVAASS+IGDPLREL +ECG+EFDEEKTAVIDH NY
Sbjct: 264 SVEEFGGTVDVPAITNFIDGGGNVLVAASSNIGDPLRELATECGVEFDEEKTAVIDHLNY 443
Query: 148 DVSDLGQHTLIVADTENLLKAPTIVGKSSLNPILFRGVGMVADPDNPLVLDILTGSSTSY 207
DV+D G+HTLIVAD NLL AP IVGK +P LFRGVGMV+DP+NPLVL++L S T+Y
Sbjct: 444 DVTDQGKHTLIVADPSNLLDAPMIVGKKGKSPFLFRGVGMVSDPENPLVLNVLHASPTAY 623
Query: 208 SFFPDKPITQYPHAVGRNTLLIAGLQARNNARVIFSGSLDFFSDAFFNSAVQKATPGAQR 267
S P + I ++PHAVG NTLLIAGLQARNNARV+F GSLDFFSD FF+S+VQ A G Q+
Sbjct: 624 SHSPTEKIDEFPHAVGANTLLIAGLQARNNARVVFVGSLDFFSDEFFHSSVQNALKG-QK 800
Query: 268 YSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGEMAPPNAYTVTDLVEYSIIIEQLSN 327
+ Q+GN ELA L++WVF ++GVLRVG V+HHR G+ P AY + ++YSI IE+L N
Sbjct: 801 FPQSGNQELAQNLAQWVFHQKGVLRVGKVAHHRTGQKQPDPAYIINQDIDYSIQIEELVN 980
Query: 328 GKWVPFDGDDIQLEFVRIDPFVRTFLKRKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHL 387
G+W PF+G+D+QLEFVRIDPFVRT LKRK G + F LPDVYGVFQF VDYNR+GYT L
Sbjct: 981 GEWRPFNGEDVQLEFVRIDPFVRTILKRKNGLFYTSFTLPDVYGVFQFIVDYNRVGYTRL 1160
Query: 388 YSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMAGLFIFSIVFLHMK 435
+S+TQVSV PLQHTQYER+IPSA+PYY+SAFSMM G+ IFS VFLH +
Sbjct: 1161FSTTQVSVWPLQHTQYERYIPSAFPYYSSAFSMMVGVVIFSFVFLHFR 1304
>02987
Length = 2020
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 307 PNAYTVTDLVEYSIIIEQLSNGKWVPFDGDDIQLEFVRIDPFVR 350
P A + L YSI I ++++ W F+G + L + PF+R
Sbjct: 1856 PQAXNIEKLSSYSI*INKITHMIWXIFEGIYLHLXXEILAPFMR 1725
>02457
Length = 934
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 384 YTHLYSSTQVSVRPLQHTQYERFIPSA 410
YT LYS ++++ + HT Y FI SA
Sbjct: 659 YTCLYSINNLALKKMMHTLYSHFIISA 739
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|74315975|ref|NP_081633.1| proteasome 26S non-ATPase
subunit 1 [Mus musculus]
(953 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
32303 476 e-169
02455 116 4e-26
00896 68 1e-11
34335 47 3e-05
>32303
Length = 1266
Score = 476 bits (1224), Expect(3) = e-169, Method: Compositional matrix adjust.
Identities = 220/274 (80%), Positives = 250/274 (91%)
Frame = -3
Query: 537 QETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNN 596
+ TQHEKILRGLAVGIAL MYGRMEEADAL+ESL RDKDPILR +GMYT+AMAYCGSGNN
Sbjct: 874 RTTQHEKILRGLAVGIALTMYGRMEEADALVESLTRDKDPILRWAGMYTLAMAYCGSGNN 695
Query: 597 KAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMAL 656
+AIRRLLHVAVSDVNDDVRR AV SLGF+LFRTPEQCPSVVSLLSESYNPHVR+GAAMAL
Sbjct: 694 QAIRRLLHVAVSDVNDDVRRVAVTSLGFLLFRTPEQCPSVVSLLSESYNPHVRFGAAMAL 515
Query: 657 GICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKV 716
GI CAG+G KEA+ LLEPMTNDPVNYVRQGALIASALI+IQ E++CPKV FRQLY+KV
Sbjct: 514 GIACAGSGLKEAMALLEPMTNDPVNYVRQGALIASALILIQHNEVSCPKVTHFRQLYAKV 335
Query: 717 INDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLS 776
I+DKH+DVMAKFGAILAQGI+DAGG N T+SLQSRTGHT+M +VVG+LVF QFW+W+PL+
Sbjct: 334 ISDKHEDVMAKFGAILAQGIIDAGGRNCTVSLQSRTGHTNMDAVVGLLVFCQFWYWYPLT 155
Query: 777 HFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPST 810
HFLSLA++P C++GLN DLKMPKV S+ +P +
Sbjct: 154 HFLSLAFSPACIVGLNADLKMPKV---SSSRPGS 62
Score = 101 bits (252), Expect(3) = e-169, Method: Composition-based stats.
Identities = 45/56 (80%), Positives = 49/56 (87%)
Frame = -1
Query: 407 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLL 462
SLG IH GHEKEAL LM++YLPKDT+ GSAY EGGGLYALGLIHANHGG I +YLL
Sbjct: 1266 SLGCIHHGHEKEALNLMSSYLPKDTTAGSAYSEGGGLYALGLIHANHGGQITEYLL 1099
Score = 59.7 bits (143), Expect(3) = e-169, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 40/85 (47%)
Frame = -2
Query: 454 GGDIIDYLLNQLKNASNDIVRHXXXXXXXXXXXXXXRQDVYDLLKTNLYQDDXXXXXXXX 513
GG QLK+AS D+VRH RQD+Y+ LK NLYQDD
Sbjct: 1124 GGRSPSTSWGQLKDASTDMVRHGGCLGLGLAAMGTARQDIYEQLKFNLYQDDAVTGEAAG 945
Query: 514 XXXXXXXXXSKNAQAIEDMVGYAQE 538
+K+ AIEDMV YAQ+
Sbjct: 944 LAMGLVMLGTKSTPAIEDMVAYAQD 870
>02455
Length = 832
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 63/82 (76%)
Frame = -1
Query: 755 THMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYP 814
T+M +VVG+LVF QFW+W+PL+HFLSLA++P C++GLN DLKMPKV++KS+ KPS +AYP
Sbjct: 832 TNMDAVVGLLVFCQFWYWYPLTHFLSLAFSPACIVGLNADLKMPKVEFKSSGKPSLYAYP 653
Query: 815 APLXXXXXXXXXXXSTAVLSIT 836
PL TAVLSIT
Sbjct: 652 PPLEEKKNQTKEKVETAVLSIT 587
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -1
Query: 875 FQLLDNPARVMPAQLKVLSMTETCRYQPFKPLSIGGIIILKDTS-EDVEELVEPVAAHGP 933
F+LL NPARVM QL+VLS +E RY+P K LS GGI+ILK+ + E+ E+LVE V A GP
Sbjct: 349 FELLSNPARVMKNQLRVLSSSEGSRYRPVKDLSHGGIVILKNVNPEEEEDLVEFVQAGGP 170
Query: 934 K 934
K
Sbjct: 169 K 167
>00896
Length = 2317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -3
Query: 875 FQLLDNPARVMPAQLKVLSMTETCRYQPFKPLSIGGIIILKDTS-EDVEELVEPVAAHGP 933
F+LL NPARVM QL+VLS +E RY+P K LS GGI+ILK+ + E+ E+LVE V A GP
Sbjct: 1595 FELLSNPARVMKNQLRVLSSSEGSRYRPVKDLSHGGIVILKNVNPEEEEDLVEFVQAGGP 1416
Query: 934 K 934
K
Sbjct: 1415 K 1413
>34335
Length = 561
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2
Query: 583 MYTVAMAYCGSGNNKAIRRLLHVAVS 608
MYT MAYCGSGNN+AIRRLLHV VS
Sbjct: 23 MYT--MAYCGSGNNQAIRRLLHVVVS 94
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|170932536|ref|NP_031942.2| Ddx19-like protein [Mus
musculus]
(478 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02498 325 e-168
01062 270 1e-72
09316 209 2e-54
00621 141 6e-34
07310 139 2e-33
19151 126 2e-29
00162 115 5e-26
00739 102 3e-22
01517 99 5e-21
08036 64 4e-20
19640 88 6e-20
02054 90 2e-18
34295 80 2e-15
14337 79 5e-15
22006 75 9e-14
31781 72 4e-13
31899 70 2e-12
11624 68 9e-12
00617 62 7e-10
12995 60 2e-09
39583 57 1e-08
17544 56 2e-08
33543 54 1e-07
10649 54 1e-07
19525 54 2e-07
17708 50 3e-06
31220 46 4e-05
11160 38 9e-05
30136 44 1e-04
06438 44 2e-04
33025 43 3e-04
03381 43 3e-04
04107 42 6e-04
11423 40 0.002
33083 36 0.038
12624 29 3.7
>02498
Length = 1955
Score = 325 bits (834), Expect(2) = e-168, Method: Compositional matrix adjust.
Identities = 151/231 (65%), Positives = 190/231 (82%)
Frame = +1
Query: 59 SLLNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQ 118
SLL KL+ S L+++ +EVL++DP+SPLYSVKSFE L LKPQLL+GVY MGFN PSKIQ
Sbjct: 37 SLLQKLLHSKLINSKTDIEVLRKDPNSPLYSVKSFEALNLKPQLLKGVYDMGFNAPSKIQ 216
Query: 119 ENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTG 178
E ALP++LA+PP N+IAQSQSGTGKTAAFVL MLSRV+ + +PQCLCL+PTYELALQ G
Sbjct: 217 ETALPILLADPPVNMIAQSQSGTGKTAAFVLTMLSRVDISQTFPQCLCLAPTYELALQIG 396
Query: 179 KVIEQMGKFHPELKLAYAVRGNKLERGQKVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVF 238
+VIE+M K L++ YAVRG ++ RG+ +SEQIVIGTPGTV+DW + K + +K++VF
Sbjct: 397 EVIEKMSKHMTGLEIRYAVRGERVNRGEVLSEQIVIGTPGTVMDWSHRFKALPLEKLRVF 576
Query: 239 VLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVP 289
VLDEADVMI+ QGHQDQS RIQ+ L CQMLLFSAT++ V +FAQ+++P
Sbjct: 577 VLDEADVMISMQGHQDQSTRIQKRLSSGCQMLLFSATYDQVVMQFAQRIIP 729
Score = 285 bits (730), Expect(2) = e-168, Method: Compositional matrix adjust.
Identities = 127/189 (67%), Positives = 161/189 (85%)
Frame = +3
Query: 290 DPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLA 349
DP II LKREEE+LD IKQYY+ CN++EEK+ ALCN+YG+I++ Q+MIFCH R TA+WLA
Sbjct: 732 DPVIISLKREEESLDNIKQYYIDCNSQEEKYVALCNIYGSISVGQSMIFCHKRSTAAWLA 911
Query: 350 AELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDL 409
++ + H V LL+GE+ +EQRAA+I+RFREGKEKVL+TTNV ARGIDVE V+VV+NFDL
Sbjct: 912 ERMTADHHAVGLLTGELTIEQRAAIIKRFREGKEKVLITTNVSARGIDVEMVTVVVNFDL 1091
Query: 410 PVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDD 469
PV +D PD ETYLHRIGRTGRFGK G+A+NMVD+ SM I+ I++HF +KIE+LDT+D
Sbjct: 1092PVTQDWRPDCETYLHRIGRTGRFGKNGIAINMVDNSRSMAIMRSIEKHFGRKIEKLDTED 1271
Query: 470 LDEIEKIAN 478
LDEIEKI++
Sbjct: 1272LDEIEKISS 1298
>01062
Length = 2138
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 238/381 (62%), Gaps = 7/381 (1%)
Frame = -3
Query: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAM 151
+F+ + ++ +LL+G+YA GF +PS IQ+ A+ ++ +++IAQ+QSGTGKTA F +++
Sbjct: 2076 TFDNMGIREELLRGIYAYGFEKPSAIQQRAVKPIVK--GRDVIAQAQSGTGKTATFSISV 1903
Query: 152 LSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGN-------KLER 204
L ++ R Q L LSPT ELA Q KV+ +G + ++ + G KL+
Sbjct: 1902 LQCLDIQLRETQALILSPTRELATQIQKVMLALGDYM-NVQCHSCIGGTNIGEDIRKLDY 1726
Query: 205 GQKVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
GQ IV GTPG V D K + + + IK+ +LDEAD M+ +G ++Q + R LP
Sbjct: 1725 GQ----HIVSGTPGRVFDMI-KRRNLRTRSIKMMILDEADEML-NKGFKEQIYDVYRYLP 1564
Query: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALC 324
Q++L SAT + + K + DP I +KR+E TL+ IKQ++V E KF LC
Sbjct: 1563 PATQVILISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLC 1384
Query: 325 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 384
+LY +TI QA+IFC+T++ WL ++ + V+ + G+M ++R A+++ FR G +
Sbjct: 1383 DLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKEREAIMKVFRAGDSR 1204
Query: 385 VLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDS 444
VL+TT+V ARGIDV+QVS+VIN+DLP ++ E Y+HRIGR+GRFG++G+A+N V
Sbjct: 1203 VLITTDVWARGIDVQQVSLVINYDLPNNR------ELYIHRIGRSGRFGRKGVAINFV-K 1045
Query: 445 KHSMNILNRIQEHFNKKIERL 465
+ IL I+++++ +I+ +
Sbjct: 1044 NDDIRILRDIEQYYSTQIDEM 982
>09316
Length = 2312
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 217/400 (54%), Gaps = 8/400 (2%)
Frame = +2
Query: 80 QRDPSSPLYSVKS--FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQS 137
++D S+ S F + LKP+LL+ + GF PS++Q +P + +++ Q+
Sbjct: 806 KKDVKGTYVSIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQHECIPQAILS--MDVLCQA 979
Query: 138 QSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAV 197
+SG GKTA FVLA L ++EP D L ++ T ELA Q K E+ K+ +K+A
Sbjct: 980 KSGMGKTAVFVLATLQQLEPVDGQVSVLVMAHTRELAFQISKEYERFSKYMNNVKIAVFF 1159
Query: 198 RGNKLERGQKV----SEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 253
G +++ ++V IV+GTPG L +K ++ KKIK F+LDE D M+A +
Sbjct: 1160 GGMSVKKDEEVLSKNCPHIVVGTPGR-LHALAKANNLNLKKIKHFILDECDKMLADLDMR 1336
Query: 254 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEE-TLDTIKQYYVL 312
I R+ P Q+++FSAT + +K + DP + + + + TL ++Q+Y
Sbjct: 1337 RDVQEIFRLTPHEKQVMMFSATLSKEIRPICKKFMQDPMEVYVDDDSKLTLHGLQQHY-- 1510
Query: 313 CNNRE-EKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQR 371
C ++ EK + L L + Q +IF + L+ L ++ + +M E+R
Sbjct: 1511 CKLKDNEKNRKLFELLDVLEFNQVIIFVKSVPRCMALSQLLLEQNFPAIAIHRQMTQEER 1690
Query: 372 AAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGR 431
+ ++F++ ++++LV TN+ RG+D+E+V++V N+D+P D D TYLHR+ R GR
Sbjct: 1691 LSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSD------TYLHRVARAGR 1852
Query: 432 FGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471
FG +GLA+ V ++ ILN +QE F I L D++D
Sbjct: 1853 FGTKGLAITFVSDENDAKILNDVQERFEVNITEL-PDEID 1969
>00621
Length = 2263
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 198/399 (49%), Gaps = 40/399 (10%)
Frame = +1
Query: 90 VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149
++ ++E L +++ + +G+ P+ IQ A+P+ L +++I +++G+GKTAAF++
Sbjct: 250 IRFWKESDLGADIMEVIDRVGYKEPTPIQMQAIPIGLQN--RDIIGVAETGSGKTAAFLI 423
Query: 150 AML---------SRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPEL--KLAYAVR 198
+L R+E AD+ P + L+PT ELA Q + E+ KF L ++ +
Sbjct: 424 PLLVWIQSLPKIERLEDADQGPYAVILAPTRELAQQ---IEEETRKFGEGLGIRVVSVIG 594
Query: 199 G-NKLERGQKVSE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQ 255
G ++ E+G K+ + ++VI TPG ++D +++ + V+DEAD MI G + +
Sbjct: 595 GISREEQGFKLQQGCEVVIATPGRMIDVLEN-RYLVLNQCTYVVMDEADRMI-NMGFEPE 768
Query: 256 SIRIQRMLP-------------------------RNCQMLLFSATFEDSVWKFAQKVVPD 290
+I LP + Q ++F+AT V + A+ +
Sbjct: 769 VRKILDYLPVSNQKPDNDDAEDDLKMLQNFKSKHKYRQTVMFTATMPPQVERLARTFLRR 948
Query: 291 PNIIKLKREEETLDTIKQ-YYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLA 349
P ++ + + ++ ++Q Y+L + EK + L + A +IF + +K A LA
Sbjct: 949 PTVVYIGNVGKPVERVEQIVYMLTES--EKRKKLIEVLNAGVDPPIIIFVNQKKGADVLA 1122
Query: 350 AELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDL 409
L K G L G EQR + + G + ++V T+V RGID++ VS+V+N+D+
Sbjct: 1123KSLEKMGFNATTLHGGKGQEQREYALASLKGGAKDIMVATDVAGRGIDIKDVSLVLNYDM 1302
Query: 410 PVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSM 448
E Y HRIGRTGR GK G ++ + + SM
Sbjct: 1303AR------TIEDYTHRIGRTGRAGKEGTSITFLTKEDSM 1401
>07310
Length = 712
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 139/244 (56%)
Frame = +2
Query: 220 VLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDS 279
+LD +K + + P + VLDEAD +++ Q + I LP Q+LL+SATF S
Sbjct: 5 ILDLMNK-RLVKPDTCGILVLDEADKLLS-QDFKGMLDNIIAHLPPQRQILLYSATFPLS 178
Query: 280 VWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFC 339
V +F +K + +P I L EE TL + QYY ++ K L L+ + I Q++IFC
Sbjct: 179 VEQFMKKYLKNPYEINLM-EELTLKGVTQYYAFVQEKQ-KVHCLNTLFSKLQINQSIIFC 352
Query: 340 HTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVE 399
++ + LA ++++ G+ + +M + R V FR+G + LV +++ RGID++
Sbjct: 353 NSTQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQ 532
Query: 400 QVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFN 459
V+VVINFD P ETYLHRIGR+GR+G G+A+N++ + + L++I++
Sbjct: 533 AVNVVINFDFP------KHAETYLHRIGRSGRYGHLGVAINLITFEDRFS-LHKIEQELG 691
Query: 460 KKIE 463
+I+
Sbjct: 692 TEIK 703
>19151
Length = 625
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 73/89 (82%)
Frame = -3
Query: 384 KVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVD 443
KVL+TTNV +RGID+EQV++V+NFDLP+D GN D ETYLHRIGRTGRFGK G+A+N++D
Sbjct: 623 KVLITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIAINLID 444
Query: 444 SKHSMNILNRIQEHFNKKIERLDTDDLDE 472
+ SMN+ I++HF K I L+TD+ DE
Sbjct: 443 GEKSMNVCRAIEKHFQKDIVYLNTDNADE 357
>00162
Length = 2322
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 148/300 (49%), Gaps = 9/300 (3%)
Frame = +3
Query: 163 QCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV--SEQIVIGTPGTV 220
+ L ++PT ELA Q +V+ ++ FH + + G + R + IVI T G +
Sbjct: 141 EALIITPTRELAFQIYEVLNKIRTFH-DFSANLVIGGKFMWRETHLMGKTNIVICTVGRL 317
Query: 221 LDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSV 280
L + D ++KV VLDEAD ++ ++ QD + + PR Q LLFSAT SV
Sbjct: 318 LHHLESTQAFDVSELKVLVLDEADRIMDSKFAQDMDSIMSHLPPR--QTLLFSATQTMSV 491
Query: 281 WKFAQKVVPDPNIIKLKREEE--TLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIF 338
A+ + DP+ + + R E T ++Q Y++C EK L + + M+F
Sbjct: 492 KTLARLSLKDPSYVSVDRHAEYVTPTGLEQSYIVCE-LHEKLSLLYSFLKNHPNNKIMVF 668
Query: 339 CHTRKTASWLAAELSKE--GHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGI 396
T K A ++ + +E G V +L G + +R + F + +L+TT++ RG+
Sbjct: 669 LQTCKQARYVHTVIKRERPGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGL 848
Query: 397 DVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMV---DSKHSMNILNR 453
D V+ VI D PVD + TY+HR GRT RF G A+ ++ + +H + L+R
Sbjct: 849 DFPAVNWVIQLDCPVDVN------TYIHRAGRTARFECNGQALLVLLPSEEEHMVEALHR 1010
>00739
Length = 1313
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 6/264 (2%)
Frame = +3
Query: 202 LERGQK--VSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQ-GHQDQSIR 258
+++GQ V IVI TPG + D K++K V+DEAD ++ G Q + I
Sbjct: 12 MKQGQDLAVKPHIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDDNFGAQLEPIL 191
Query: 259 IQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREE 318
+ LP Q LLFSAT +V V+ P + + E T+D +++ YVL +
Sbjct: 192 TR--LPSARQTLLFSATLSPTVNALRDSVLNKPFVWIQQSERATVDELQEDYVLVPASMK 365
Query: 319 K---FQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVI 375
L + + +IF T K A L L K A+L + R + +
Sbjct: 366 DAYMVHILDHWLKDHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFRLSSL 545
Query: 376 ERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKR 435
RF+ + ++L++T+V +RG+D+ V ++IN ++P P + Y+HR+GRT R G+
Sbjct: 546 SRFKSNQTRILISTDVASRGLDIPTVDLIINHNIP----NRPRD--YVHRVGRTARAGRC 707
Query: 436 GLAVNMVDSKHSMNILNRIQEHFN 459
G ++++V ++ + ++ I+ H N
Sbjct: 708 GQSISLV-TEFDIKLIKSIESHIN 776
>01517
Length = 2605
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 104/215 (48%), Gaps = 6/215 (2%)
Frame = +2
Query: 238 FVLDEADVMIATQGHQDQSIRI---QRMLPRNC-QMLLFSATFEDSVWKFAQKVVPDPNI 293
VLDEAD M+ G + Q RI M P Q L+FSATF + A+ + +
Sbjct: 50 LVLDEADRML-DMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPKEIQLLARDFLDNYIF 226
Query: 294 IKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAM--IFCHTRKTASWLAAE 351
+ + R T + I Q V E++ L L + T +++ +F T+K A L
Sbjct: 227 LAVGRVGSTSENITQKVVWVEEPEKRSFLLDLLMASGTGPESLTLVFVETKKGADSLEQF 406
Query: 352 LSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPV 411
L E + + G+ +R + F+ G +LV T V ARG+D+ V VINFDLP
Sbjct: 407 LMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVAARGLDIPNVRHVINFDLPS 586
Query: 412 DKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKH 446
D E Y+HRIGRTGR G GLA + + K+
Sbjct: 587 DI------EEYVHRIGRTGRVGNLGLATSFFNDKN 673
>08036
Length = 1226
Score = 63.9 bits (154), Expect(2) = 4e-20, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 213 VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLF 272
V+GTP +L + ++ +++ V+DEAD ++ + GH+ ++ LPR Q L
Sbjct: 1 VVGTPSRILAHL-RAGHLELHTVQMLVVDEAD-LVFSFGHEADMKKLMEELPRIYQAFLM 174
Query: 273 SATFEDSVWKFAQKVVPDPNIIKLKREEETLDT-IKQYYVLCNNREEKFQALCNLYGAIT 331
SAT + V + V+ +P I+KLK + T + QY+V C ++ + L +
Sbjct: 175 SATLSEDVKALKKMVLHNPVILKLKESQLPESTQLTQYHVKCEVDDKFTLMVAVLKLGLV 354
Query: 332 IAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTN 390
++++F ++ + L L G +L+ E+ V+ R ++ +F EG +++ ++
Sbjct: 355 RGKSILFVNSVDSCYKLKLFLEPFGIPACVLNSELPVKSRCHIVSQFNEGLYDIIIASD 531
Score = 52.0 bits (123), Expect(2) = 4e-20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 392 CARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNIL 451
ARGID + VS VINF+ P D Y+HR+GRT R K+G A++++ S+H +
Sbjct: 609 VARGIDFQNVSNVINFEFPKTVDA------YIHRVGRTARGDKQGCALSLI-SRHENDQF 767
Query: 452 NRIQE 456
++E
Sbjct: 768 EAVEE 782
>19640
Length = 456
Score = 87.8 bits (216), Expect(2) = 6e-20, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 64/101 (63%)
Frame = -1
Query: 337 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGI 396
IFC+TR+ L E+S V+ + G+M R ++++FR G +VL+TT++ ARGI
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 397 DVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGL 437
DV+QVS+VIN+DLP ++ E Y+HRIGR G R L
Sbjct: 276 DVQQVSLVINYDLPSNR------ENYIHRIGRGGVLVARVL 172
Score = 27.7 bits (60), Expect(2) = 6e-20, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -3
Query: 431 RFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEI 473
RFG++G+A+N + + IL I++ ++ IE + + D I
Sbjct: 193 RFGRKGVAINFI-TDDDRRILKDIEQFYHTTIEEMPANIADLI 68
>02054
Length = 1110
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Frame = -3
Query: 281 W-KFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFC 339
W K + + DP +++ + +T+DT++Q Y+ + K L ++ + M+FC
Sbjct: 793 WPKLQRASLRDPVKVEVSNKYQTVDTLQQSYLFIPAKY-KDAYLVSILNELAGNSFMVFC 617
Query: 340 HTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVE 399
T +A L G L G+M +R + +F+ +L+ T+V +RG+D+
Sbjct: 616 STCANTQRVALLLRNLGFTAIPLHGQMSQAKRLGSLNKFKSKDRSILIATDVASRGLDIP 437
Query: 400 QVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFN 459
V VV+N D+P ++ Y+HR+GRT R G+ G A+ V S++ + + RI+
Sbjct: 436 HVDVVLNLDIPT------HSKDYMHRVGRTARAGRSGRAITFV-SQYDVELYQRIEHLIG 278
Query: 460 KKIERLDTDDLDEIEKIA 477
KK+ T+ D++ ++A
Sbjct: 277 KKLSEYPTEK-DQVMQLA 227
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%)
Frame = -2
Query: 211 QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQML 270
I+I TPG ++D K + +K V+DEAD I QD+ +I +++PR
Sbjct: 998 HIIIATPGRLVDHLENTKGFSLRALKFLVMDEAD-RILDMNFQDEVDKILKVIPRERNTY 822
Query: 271 LFSATFEDSVWKFAQKVVPDPN 292
LFSAT + V K + P+
Sbjct: 821 LFSATMTNKVAKTTASITEGPS 756
>34295
Length = 694
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%)
Frame = -1
Query: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
G I MIF +T+K L+ L+ + L G M ++R + + RF+ + L+
Sbjct: 556 GE*KIPNVMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLI 377
Query: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
T+V ARG+D+ V +VIN LP P + Y+HR+GRT R G++G+A+++
Sbjct: 376 ATDVAARGLDIPSVQLVINHMLP----RTP--KEYIHRVGRTARAGRKGVAISIFRFPRD 215
Query: 448 MNILNRIQEHFNKKIERLDTDD 469
+ +L I+E N K+ D+
Sbjct: 214 LELLGAIEEEINTKLTEHPIDE 149
>14337
Length = 693
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = +2
Query: 319 KFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERF 378
K A+ NL+ ++F +++ A L +E + H+V + + +R A + F
Sbjct: 17 KLMAMRNLFTEGITPPVLVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDATVRAF 196
Query: 379 REGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLA 438
EG+ VLV T + RGID + +++VIN+D P + +Y+HRIGRTGR G G A
Sbjct: 197 TEGRVWVLVCTELMGRGIDFKGINLVINYDFPTNA------VSYIHRIGRTGRAGVPGRA 358
Query: 439 VNMV---DSKHSMNILNRIQE 456
+ D H +I N I+E
Sbjct: 359 ITFFTEQDVTHLRSIANIIKE 421
>22006
Length = 3414
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Frame = +2
Query: 114 PSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVE-PADRYPQCLCLSPTYE 172
P+ IQ +P+++ ++++A +++G+GKTAAF++ ML R++ + + + L LSPT E
Sbjct: 3005 PTPIQRKTIPVIMEG--KDMVAMARTGSGKTAAFLVPMLERLKMHSSKGARALILSPTRE 3178
Query: 173 LALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKVSEQ---IVIGTPGTVLDWCSKLKF 229
LALQT K +++GKF +L+ A + G+++E Q I+I TPG +L ++K
Sbjct: 3179 LALQTLKFTKELGKFL-DLRAAVILGGDRMEDQFSALHQNPDIIIATPGRLLHVLVEMK- 3352
Query: 230 IDPKKIKVFVLDEAD 244
K++ V DEAD
Sbjct: 3353 KSLKEVIYVVFDEAD 3397
>31781
Length = 416
Score = 72.4 bits (176), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -2
Query: 281 WKFAQKVVP-DPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFC 339
W K P +P I+L+REEE+LD I+QYY+ C +K++ALCN+YG+I++ Q+MIFC
Sbjct: 307 WSSLAKSSPGNPVTIRLRREEESLDNIQQYYIRCRTLSDKYRALCNIYGSISVGQSMIFC 128
Score = 62.4 bits (150), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Frame = -3
Query: 246 MIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDT 305
MI+ QGHQD S RI R L + +A V + V + + L+T
Sbjct: 414 MISMQGHQDSSTRIHRHLSAG----MSNAAVLGHVRRLCDGV---------RSQNHPLET 274
Query: 306 IKQYYVLCNNREEKFQALCNLY------------GAITIAQAMIF-----CHTRKTASWL 348
+ ++ C+ R+ + + A ++A +++ R TASWL
Sbjct: 273 L*RF--ACDGRKSLWTTSSSTTFAAAH*ATSTARSATSMAVSLLVRA*SSVKKRSTASWL 100
Query: 349 AAELSKEGHQVALLSGEMMVEQRAAVIERFREG 381
A+++S + H VALL+GE+ +EQRAA+I RFR G
Sbjct: 99 ASKMSDDHHAVALLTGELSIEQRAAIIHRFRNG 1
>31899
Length = 453
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 56/107 (52%)
Frame = -1
Query: 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
F L L +L G+ GF RPS IQ A+P L +LI Q++SGTGKT F + L
Sbjct: 339 FASLLLSKPVLNGLKNAGFERPSPIQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSVVAL 166
Query: 153 SRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRG 199
+E R Q L L+PT E+ALQ +VI +G L+ + G
Sbjct: 165 EGIETTARSTQVLVLAPTREIALQIWEVINSIGSAMSGLQCHTFIGG 25
>11624
Length = 2257
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 60/101 (59%)
Frame = -1
Query: 356 GHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDG 415
G V S + E+R ++++F +GK +LV ++ ARG+DV+ V VI++D P
Sbjct: 829 GLSVKEFSSRLPGERRKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNP----- 665
Query: 416 NPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQE 456
P +TY+HR+GRT R G+ G A+++++ K + ++E
Sbjct: 664 -PYIKTYIHRVGRTARAGRAGTAISLLEKKEFFHFKQMMRE 545
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Frame = -3
Query: 130 PQNLIAQSQSGTGKTAAFVLAMLS----RVEPADRYPQCLCLSPTYELALQTGKVIEQMG 185
P+++ + +G+GKT A+ L ++ R+ P R + + P +LA Q +V
Sbjct: 1817 PRDICVSAPTGSGKTLAYTLPIIQCLKQRMVPHVR---AVIVLPVRDLAEQVYQVFCHYC 1647
Query: 186 KFHPELKLAYAVRGN--KLERGQKVSEQ----------IVIGTPGTVLDWCSKLKFIDPK 233
P LK+ V +E+ V ++ I++ TPG ++D + D
Sbjct: 1646 ADTP-LKVGIVVGKTVFNVEQDTLVKKRYGGVYHSVIDILVATPGRLVDHINSTPGFDLS 1470
Query: 234 KIKVFVLDEADVMI 247
++ V+DEAD M+
Sbjct: 1469 HLRFLVIDEADRMM 1428
>00617
Length = 1505
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 57/89 (64%)
Frame = -3
Query: 371 RAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTG 430
R + + RF+ + ++L++T+V +RG+D+ V ++IN ++P P + Y+HR+GRT
Sbjct: 1440 RLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIP----NRPRD--YVHRVGRTA 1279
Query: 431 RFGKRGLAVNMVDSKHSMNILNRIQEHFN 459
R G+ G ++++V ++ + ++ I+ H N
Sbjct: 1278 RAGRCGQSISLV-TEFDIKLIKSIESHIN 1195
>12995
Length = 1072
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Frame = +3
Query: 291 PNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQ-AMIFCHTRKTASWLA 349
P +++L + + ++ ++ C +++ L L I+ ++F T+ +L
Sbjct: 3 PTLVRLDVDSKLSAQLQMSFLSCRADDKEAMLLYLLRDVISENDLTVVFVATKHHVEYLN 182
Query: 350 AELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDL 409
L+K G + + R + +F + KV++ T++ ARGID+ Q+ V+NF
Sbjct: 183 TLLTKCGIACTYIYSSLDQTARKIHVAKFTHKQVKVMLVTDLAARGIDIPQLDNVVNFHF 362
Query: 410 PVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMV 442
P + ++HR+GR R G+ G A ++V
Sbjct: 363 PAKA------KLFVHRVGRVARAGRSGTAYSLV 443
>39583
Length = 234
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = -3
Query: 370 QRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRT 429
QR ++RF+EG+ VL+ T++ +RG+D+E V VINF +P + Y+HR+GRT
Sbjct: 175 QRLEALKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTL------KHYVHRVGRT 14
Query: 430 GRFG 433
R G
Sbjct: 13 ARAG 2
>17544
Length = 1047
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 17/109 (15%)
Frame = +2
Query: 85 SPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKT 144
SP + SFEE L + + +N+P+ +Q+ ALP++L + ++L+A +Q+G+GKT
Sbjct: 614 SPPPHINSFEECTLGEIIRNNIVLSKYNKPTPVQKFALPIVLGK--RDLMACAQTGSGKT 787
Query: 145 AAFVLAMLSRV---EPADR--------------YPQCLCLSPTYELALQ 176
AAF+L +L++V P YP L L+PT ELA Q
Sbjct: 788 AAFLLPILNQVYENGPTPEALQQNQSRGYRRKMYPIALILAPTRELASQ 934
>33543
Length = 471
Score = 54.3 bits (129), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3
Query: 421 TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
TYLHR+GR GRFG RGLA+ V ++ ++LN +QE F + L
Sbjct: 3 TYLHRVGRAGRFGTRGLAITFVSNETEADVLNSVQERFEVSVTDL 137
>10649
Length = 472
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +1
Query: 356 GHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDG 415
G V +L G + +R + F + +L+TT++ RG+D V+ VI D PVD +
Sbjct: 64 GMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLDCPVDVN- 240
Query: 416 NPDNETYLHRIGRTGRFGKRGLAVNMV---DSKHSMNILNR 453
TY+HR GRT RF G A+ ++ + +H + L+R
Sbjct: 241 -----TYIHRAGRTARFECNGQALLVLLPSEEEHMVEALHR 348
>19525
Length = 585
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Frame = +2
Query: 165 LCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKL---ERGQKVSEQIVIGTPGTVL 221
L L PT ELA+Q +V +Q+ ++ ++ + A G + E ++ IV+ TPG ++
Sbjct: 23 LVLVPTRELAVQVYQVGQQISQY-TKISICLAAGGLDIKGQEAALRLCPDIVVATPGRLI 199
Query: 222 DWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVW 281
D +++ VLDEAD M+ + Q I RM Q +LFSAT D+V
Sbjct: 200 DHLHNAPNFTIAHVEILVLDEADRML-DEYFAAQMTEIIRMCNFQRQTMLFSATMSDAVQ 376
Query: 282 KFA 284
A
Sbjct: 377 DLA 385
>17708
Length = 882
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Frame = +1
Query: 129 PPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQ----CLCLSPTYELALQTGKVIEQM 184
P ++L+ +++G+GKT AF++ + + P+ C+ +SPT EL++QT V+ ++
Sbjct: 547 PHRDLMGAAKTGSGKTLAFLIPAIELMYKLKFMPRNGTGCIIISPTRELSMQTFNVLTEL 726
Query: 185 GKFHPE---LKLAYAVRGNKLERGQKVSEQIVIGTPGTVLD 222
K+H L + R +++++ +K I++ TPG +LD
Sbjct: 727 LKYHHHTFGLIMGGVNRHDEVKKLKK-GVNIIVATPGRLLD 846
>31220
Length = 818
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%)
Frame = +2
Query: 350 AELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDL 409
++ ++ + + + S E M+E+ +R K K + +RGID + V+ VINFD
Sbjct: 47 SQFNRGTYDIIIASDEHMLEKPDG*KQR----KSKHTDHESSASRGIDFQGVNNVINFDF 214
Query: 410 PVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK 445
P+D +Y+HR GRT R G ++ V K
Sbjct: 215 PLDV------TSYIHRAGRTARGNNTGSVLSFVSVK 304
>11160
Length = 646
Score = 38.1 bits (87), Expect(2) = 9e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Frame = -1
Query: 200 NKLERGQKVSEQIVIGTPGTVLDWCSKLK-----FIDPKKIKVFVLDEADVMIATQGHQD 254
+ + + K I+I TPG + D S+ + K ++V VLDEAD ++ G +
Sbjct: 628 HDISKFMKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLL-DMGFEA 452
Query: 255 QSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKR-------EEETLDTIK 307
I LP+ + LFSAT D V + + +P + +K ++ T T+
Sbjct: 451 SINTILGHLPKLRRTGLFSATQTDEVENLIRAGLRNPLRVTVKEKKLAGEADQRTPSTLS 272
Query: 308 QYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMM 367
YY++ EEKF L + ++F T + + L++ + +LS
Sbjct: 271 NYYMIVEA-EEKFSQLVKFLKTHHRDKLLLFFSTCACVDYFSMCLTQLLKHMQVLSIHSK 95
Query: 368 VEQR 371
++Q+
Sbjct: 94 MKQK 83
Score = 25.4 bits (54), Expect(2) = 9e-05, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 374 VIERFREGKEKVLVTTNVCARGID 397
V +FR +LV T+V ARG+D
Sbjct: 74 VFAKFRSITSGLLVCTDVMARGVD 3
>30136
Length = 524
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +2
Query: 90 VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149
++ F E L +++ + G+ P+ IQ P+ ++ N + +++G+GKT ++L
Sbjct: 128 IQDFAEAYLPDYVIKEIRRQGYKSPTPIQAQGWPIAMSG--ANFVGIAKTGSGKTLGYIL 301
Query: 150 AMLSRV---EPADRY--PQCLCLSPTYELALQTGKVIEQMG 185
+ + +P R P L L+PT ELA Q +V + G
Sbjct: 302 PAIVHINNQQPLQRGEGPIALVLAPTRELAQQIQQVATEFG 424
>06438
Length = 989
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 387 VTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMV---D 443
+T + RG+D V+ VI D PVD + TY+HR GRT RF G A+ ++ +
Sbjct: 25 LTVTLACRGLDFPAVNWVIQLDCPVDVN------TYIHRAGRTARFECNGQALLVLLPSE 186
Query: 444 SKHSMNILNR 453
+H + L+R
Sbjct: 187 EEHMVEALHR 216
>33025
Length = 558
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Frame = +3
Query: 188 HPELKLAYAVRGNKLERGQKVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMI 247
HP + R + R K +V+GTPG +LD+ + I K + +LDEAD M+
Sbjct: 45 HPSVVYGATDRRYQKSRIMK-GANLVVGTPGRLLDFIGD-QTISLGKCQYLILDEADRML 218
Query: 248 --ATQGHQDQSIRIQRMLPRNC-QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 304
+ + + M P+ Q L+FSATF++ + + A + D I +
Sbjct: 219 DMGFEPEIRKLVDTHGMPPKTQRQTLMFSATFKEDIQRLAGDFLNDYLFITVGIVGGACS 398
Query: 305 TIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFC 339
+ Q + L +R +K LC + + A+++ C
Sbjct: 399 DVTQTF-LEVDRLQKRDHLCEILNEMGTAKSVGVC 500
>03381
Length = 1206
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 396 IDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK 445
+D+ + V+N+D+ D D T+ HR+GRTGR G++G A ++ K
Sbjct: 3 LDIPHIRTVVNYDVARDID------THTHRVGRTGRAGEKGSAYTLITDK 134
>04107
Length = 2502
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +1
Query: 334 QAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKE--KVLVTTNV 391
+ +IF K L A L+ GH+ L G VEQR A+++RF K +++T
Sbjct: 676 RVLIFTQMTKMLDVLEAFLNYHGHRYLRLDGTTKVEQRQALMDRFNADKRIFCFILSTRS 855
Query: 392 CARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRT 429
G+++ V+ +D + + + HRIG+T
Sbjct: 856 GGIGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 969
>11423
Length = 1434
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = -2
Query: 400 QVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQE 456
Q VI++D P P +TY+HR+GRT R G+ G A+++++ K + ++E
Sbjct: 1403 QRKYVISYDNP------PYIKTYIHRVGRTARAGRAGTAISLLEKKEFFHFKQMMRE 1251
>33083
Length = 1931
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 394 RGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGR 431
RG+D+ QV ++ +D P +++ Y+HR+GRT R
Sbjct: 1 RGLDIPQVDWIVQYDPP------DESKEYIHRVGRTAR 96
>12624
Length = 589
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 373 AVIERFREGKEKVLVTTNVCARGIDVEQV 401
AV E FR+G+EKVLV C G E++
Sbjct: 56 AVAEFFRKGREKVLVIDVACGTGFVGEEL 142
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31980772|ref|NP_038664.2| protein phosphatase 1,
catalytic subunit, gamma isoform [Mus musculus]
(323 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01173 582 e-167
06264 565 e-162
19040 299 1e-81
08242 273 5e-74
06084 233 1e-61
18336 171 3e-61
04295 152 2e-37
25536 149 1e-36
30980 67 7e-12
21146 64 7e-11
36367 55 5e-08
18967 54 8e-08
17953 41 8e-04
09604 27 7.5
>01173
Length = 2619
Score = 582 bits (1500), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/302 (93%), Positives = 287/302 (95%), Gaps = 5/302 (1%)
Frame = -1
Query: 26 KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
KNVQL E+EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES
Sbjct: 2619 KNVQLTESEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 2440
Query: 86 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 145
NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN
Sbjct: 2439 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 2260
Query: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205
IKLWKTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL
Sbjct: 2259 IKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 2080
Query: 206 WSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVT 265
WSDPDK+ +GWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVT
Sbjct: 2079 WSDPDKETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVT 1900
Query: 266 LFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKK-----PNATRPVTPPRGMITKQ 320
LFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+KKK N RPVTPPRG +
Sbjct: 1899 LFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPYGGLNQGRPVTPPRGNAKAK 1720
Query: 321 AK 322
K
Sbjct: 1719 GK 1714
>06264
Length = 999
Score = 565 bits (1456), Expect = e-162, Method: Compositional matrix adjust.
Identities = 272/294 (92%), Positives = 280/294 (95%), Gaps = 5/294 (1%)
Frame = -3
Query: 34 EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDY 93
EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDY
Sbjct: 997 EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDY 818
Query: 94 VDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFT 153
VDRG+QSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFT
Sbjct: 817 VDRGRQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFT 638
Query: 154 DCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV 213
DCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+
Sbjct: 637 DCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKET 458
Query: 214 LGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC 273
+GWGE+DRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC
Sbjct: 457 MGWGESDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC 278
Query: 274 GEFDNAGAMMSVDETLMCSFQILKPAEKKK-----PNATRPVTPPRGMITKQAK 322
GEFDNAGAMMSVDETLMCSFQILKPA+KKK + RPVTPPRG + K
Sbjct: 277 GEFDNAGAMMSVDETLMCSFQILKPADKKKFPYGGLSXGRPVTPPRGNAKAKGK 116
>19040
Length = 452
Score = 299 bits (766), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 141/150 (94%), Positives = 145/150 (96%)
Frame = -3
Query: 36 RGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 95
RGLCLKSREIFL QPILLELEAPL ICGDIHGQY DLLRLFEYGGFPP +NYLFLGDYVD
Sbjct: 450 RGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYVD 271
Query: 96 RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDC 155
RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN+KLWKTFTDC
Sbjct: 270 RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLWKTFTDC 91
Query: 156 FNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 185
FNCLP+AAI+DEKIFCCHGGLSPDLQ MEQ
Sbjct: 90 FNCLPVAAIIDEKIFCCHGGLSPDLQGMEQ 1
>08242
Length = 3368
Score = 273 bits (699), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 189/269 (70%), Gaps = 3/269 (1%)
Frame = -1
Query: 44 EIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLET 103
EI + + + +++P+ +CGDIHGQ+YDL LF+ GG P++NYLF+GD+VDRG S+ET
Sbjct: 3368 EILVEESNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPDTNYLFMGDFVDRGFYSVET 3189
Query: 104 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIA 162
LLLA K++YP+ L+RGNHE I ++YGFYDEC R+Y +I +W+ T+ F+ L ++
Sbjct: 3188 FLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLS 3009
Query: 163 AIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRG 222
AI+D KIFC HGGLSP +Q+++QIR I R +VP G +CDLLWSDP+ D+ GWG + RG
Sbjct: 3008 AIIDGKIFCVHGGLSPSIQTLDQIRSIDRKQEVPHDGPMCDLLWSDPE-DMQGWGVSPRG 2832
Query: 223 VSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAM 282
+ FG++VV++F + +DLICRAHQ+V +GY++ ++T++SAPNYC N A+
Sbjct: 2831 AGYLFGSDVVSQFNAANXIDLICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAI 2652
Query: 283 MSVDETLMCSFQILK--PAEKKKPNATRP 309
+ +DE L F I + P E + + +P
Sbjct: 2651 LELDEHLQRDFTIFEAAPQEARGIPSKKP 2565
>06084
Length = 1739
Score = 233 bits (593), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 168/250 (67%), Gaps = 1/250 (0%)
Frame = -2
Query: 66 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 125
HGQ+YDL+ LF+ GG P++NY+F+GD+VDRG SLET LLL K K+P+ LLRGNH
Sbjct: 1738 HGQFYDLMELFKTGGEMPDTNYVFMGDFVDRGYFSLETFTLLLTLKAKWPDKIVLLRGNH 1559
Query: 126 ECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSME 184
E I +IYGFYDEC+ +Y N W+ F+ L IAAI+DE I C HGGLSPD+++++
Sbjct: 1558 ESRQITQIYGFYDECQTKYGNANAWRYCCRVFDLLTIAAIIDECILCVHGGLSPDIKTID 1379
Query: 185 QIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLI 244
QIR I R ++P +G CDL+WSDP+ DV W + RG + FGA+V A+F+ ++L LI
Sbjct: 1378 QIRTIERNQEIPHKGAFCDLVWSDPE-DVDTWAMSPRGAGWLFGAKVTAEFVASNNLKLI 1202
Query: 245 CRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKKP 304
CRAHQ+V +GY++ +LVT++SAPNYC N A++S + ++ K P
Sbjct: 1201 CRAHQLVHEGYKYMFDEKLVTVWSAPNYCYRCGNIAAVLSFTDAEHHEAKLFKAV----P 1034
Query: 305 NATRPVTPPR 314
++ R V PPR
Sbjct: 1033 DSER-VIPPR 1007
>18336
Length = 465
Score = 171 bits (433), Expect(3) = 3e-61, Method: Compositional matrix adjust.
Identities = 86/111 (77%), Positives = 89/111 (80%)
Frame = +2
Query: 26 KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
KNVQL E + SR I L + + ICGDIHGQYYDLLRLFEYGGFPPES
Sbjct: 2 KNVQLSEQK*EAYV*ISRNI-LESAYSFRIRSTT*ICGDIHGQYYDLLRLFEYGGFPPES 178
Query: 86 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 136
NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF
Sbjct: 179 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 331
Score = 73.9 bits (180), Expect(3) = 3e-61, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +1
Query: 137 YDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIF 170
YDECKRRYNIKLWKTFTDCFNCLPIAAI+D KIF
Sbjct: 331 YDECKRRYNIKLWKTFTDCFNCLPIAAIIDVKIF 432
Score = 28.9 bits (63), Expect(3) = 3e-61, Method: Compositional matrix adjust.
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 170 FCCHGGLSPDLQ 181
CCHGGLSPDLQ
Sbjct: 429 LCCHGGLSPDLQ 464
>04295
Length = 748
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 80/92 (86%), Gaps = 6/92 (6%)
Frame = -1
Query: 229 AEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDET 288
+VV+KFL++HDLDLI RAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDET
Sbjct: 748 GDVVSKFLNRHDLDLITRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDET 569
Query: 289 LMCSFQILKPAEKKKP------NATRPVTPPR 314
LMCSFQILKP+EKK N+ RP+TPP+
Sbjct: 568 LMCSFQILKPSEKKAKYQYGGLNSGRPITPPK 473
>25536
Length = 486
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 94/127 (74%), Gaps = 1/127 (0%)
Frame = +1
Query: 29 QLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 88
QL EN+++ LC K++EI + + E++ P+ +CGD+HGQ++DL+ LF GG P++NYL
Sbjct: 106 QLSENQVKTLCEKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 285
Query: 89 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 147
F+GDYVDRG S+ET+ LL+A K+++ + +LRGNHE I ++YGFYDEC R+Y N
Sbjct: 286 FMGDYVDRGYYSVETVSLLVALKVRFRDRITILRGNHESRQITQVYGFYDECLRKYGNAN 465
Query: 148 LWKTFTD 154
+WK FTD
Sbjct: 466 VWKYFTD 486
>30980
Length = 765
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
F H + L LI RAHQ+V +GY + R +VT+FSAPNYC N A+M +D+ L SF
Sbjct: 6 FNHSNGLTLISRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDALKYSFL 185
Query: 295 ILKPAEKK-KPNATR 308
PA ++ +P+ TR
Sbjct: 186 QFDPAPRRGEPHVTR 230
>21146
Length = 408
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +3
Query: 198 QGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQ-VVEDGYE 256
QG +CDLLWSDPD D GWG + RG +TFG ++ F H + L LI RAHQ V+E +
Sbjct: 114 QGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHSNGLTLISRAHQLVMEVMFW 290
Query: 257 FFAKRQLVTLF--SAPNY 272
F Q L+ S NY
Sbjct: 291 FVTGMQTCLLYELSLQNY 344
>36367
Length = 827
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Frame = +1
Query: 173 HGGL-SPDLQS---MEQIRRIMRPTDVP--DQGLLCDLLWSDPD-------------KDV 213
HGG+ SP+ + +E I +I P P D + ++LWSDP K+
Sbjct: 1 HGGIPSPENEGGGHLEAINKIPVPLSDPEVDSPMAWEILWSDPISVDLVSPEVLKDMKEH 180
Query: 214 LGWGENDR-GVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNY 272
G+ N R G + F + FL ++ L + RAH+V E G++ + +L+T+FS+ Y
Sbjct: 181 HGFTFNSRRGTAHFFSCNALLAFLERNGLSHVIRAHEVQEVGFQVQQQGKLLTVFSSSRY 360
Query: 273 CGEFDNAGAMMS 284
CG + A +++
Sbjct: 361 CGGSNEAACVLA 396
>18967
Length = 440
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = +2
Query: 241 LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVD 286
LDLICRAHQ+V +G ++ + +LVT++SAPNYC N A++S +
Sbjct: 2 LDLICRAHQLVNEGIKYMFEGKLVTVWSAPNYCYRCGNVAAILSFE 139
>17953
Length = 626
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = -2
Query: 236 LHKHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPNYCGEFDNAGAMMSV 285
L +++L I RAH+ + GY + K Q L+T+FSAPNY ++N ++S
Sbjct: 625 LQQNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKVQLLST 458
>09604
Length = 1098
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 289 LMCSFQILKPAEKKKPNATRPVTPPRGMIT 318
L+CSFQ+ K K++ +TRP + + T
Sbjct: 846 LLCSFQVSKNKTKRRKRSTRPFKGNQNLCT 935
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981304|ref|NP_038505.2| ATPase, H+ transporting, V0
subunit D isoform 1 [Mus musculus]
(351 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01717 582 e-167
>01717
Length = 1778
Score = 582 bits (1500), Expect = e-167, Method: Compositional matrix adjust.
Identities = 268/348 (77%), Positives = 311/348 (89%)
Frame = -3
Query: 4 FPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEAS 63
FPEL FN+D+GYLEGLVRG K+G+L Q+DYLNLVQCETLEDLKLHLQSTDYGNFLANE S
Sbjct: 1731 FPELSFNIDHGYLEGLVRGFKSGILRQSDYLNLVQCETLEDLKLHLQSTDYGNFLANEPS 1552
Query: 64 PLTVSVIDDKLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIA 123
PLTVSVIDDKL+EK+V+EF+H+RNH EPLA+FLD++TY YMIDN++LLITGTLHQR I+
Sbjct: 1551 PLTVSVIDDKLREKLVIEFQHLRNHCLEPLATFLDYMTYGYMIDNIVLLITGTLHQRPIS 1372
Query: 124 ELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRN 183
EL+ KCHPLGSFEQMEA++IA TPAELYNA+LVDTPLA +F DCI EQDLDEMNIEIIRN
Sbjct: 1371 ELISKCHPLGSFEQMEAIHIASTPAELYNAVLVDTPLAPYFIDCILEQDLDEMNIEIIRN 1192
Query: 184 TLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPH 243
TLYKAYLE FY FC +GG TA+ MC L FEADRRAFIITINSFGTEL+KEDR KL+P
Sbjct: 1191 TLYKAYLEDFYNFCKQMGGATAEVMCEALAFEADRRAFIITINSFGTELTKEDREKLYPR 1012
Query: 244 CGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVKLNK 303
CG LYP+GL L++ +DY+QV+ VADYY YK LF+ AG+NPGDKTLED+FFEHEVKL K
Sbjct: 1011 CGHLYPDGLDMLSQCEDYDQVRAVADYYAAYKELFDDAGTNPGDKTLEDKFFEHEVKLMK 832
Query: 304 LAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKIDNYIPIF 351
+F++QF FGVFY++VKLKEQE RNI+WIAEC+AQRHRAKID+YIP+F
Sbjct: 831 NSFMHQFQFGVFYSYVKLKEQEIRNIIWIAECVAQRHRAKIDSYIPVF 688
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|162417975|ref|NP_034627.3| isocitrate dehydrogenase 1
(NADP+), soluble [Mus musculus]
(414 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01970 581 e-166
23955 126 2e-29
>01970
Length = 2861
Score = 581 bits (1498), Expect = e-166, Method: Compositional matrix adjust.
Identities = 272/397 (68%), Positives = 321/397 (80%)
Frame = -1
Query: 10 VVEMQGDEMTRXXXXXXXXXXXXPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNV 69
VVE+ GDEMTR PY+++D YDLG+ RD TNDQVT D+AEAIKKYNV
Sbjct: 2849 VVELDGDEMTRIIWEKIKDRLIFPYLDVDCKYYDLGLPYRDQTNDQVTIDSAEAIKKYNV 2670
Query: 70 GVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPII 129
G+KCATITPDE+RVEEFKLK+MW SPNGTIRNILGGTVFRE IIC+ IPRLV GW + I+
Sbjct: 2669 GIKCATITPDEERVEEFKLKKMWLSPNGTIRNILGGTVFREPIICQTIPRLVPGWTQAIV 2490
Query: 130 IGRHAYGDQYRATDFVVPGPGKVEITYTPKDGTQKVTYMVHDFEEGGGVAMGMYNQDKSI 189
IGRHA+GDQY+ATD V+ G G +E+ +TP+ G +VT V DF+ GGGV M MYN D+SI
Sbjct: 2489 IGRHAHGDQYKATDLVLEGNGTLELVFTPEGGKPQVT-KVFDFKXGGGVGMAMYNTDESI 2313
Query: 190 EDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKKYKSQFEAQKICYEHR 249
DFAH+SFQ AL K WPLY+STKNTILK+YDGRFKDIFQEI+DK+YK +F+ Q I YEHR
Sbjct: 2312 RDFAHASFQYALMKSWPLYMSTKNTILKRYDGRFKDIFQEIFDKEYKPKFDKQGIWYEHR 2133
Query: 250 LIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAH 309
LIDDMVAQA+KS GGF+WACKNYDGDVQSD VAQGYGSLG+MTSVL+CPDGKT+EAEAAH
Sbjct: 2132 LIDDMVAQALKSSGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVCPDGKTIEAEAAH 1953
Query: 310 GTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFAKALEDVCIETIEA 369
GTVTRHYR +QKG TSTNPIASIFAW+RGL HR KLD N +L FA+ +E C++ +++
Sbjct: 1952 GTVTRHYREHQKGNPTSTNPIASIFAWTRGLEHRGKLDGNKDLQRFAQVMEKACVDCVDS 1773
Query: 370 GFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLK 406
G MTKDLA CI GL NV YLNT +F++ +GE +
Sbjct: 1772 GKMTKDLAGCIYGLKNVTPEHYLNTMDFLEAIGEEFE 1662
>23955
Length = 699
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 71/96 (73%)
Frame = +1
Query: 311 TVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFAKALEDVCIETIEAG 370
TVTRHYR +QKG TSTNPIASIFAW+RGL HR KLD N +L FA+ +E C++ +++G
Sbjct: 1 TVTRHYREHQKGNPTSTNPIASIFAWTRGLEHRGKLDGNKDLQRFAQVMEKACVDCVDSG 180
Query: 371 FMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLK 406
MTKDLA CI GL NV YLNT +F++ +GE +
Sbjct: 181 KMTKDLAGCIYGLKNVTPEHYLNTMDFLEAIGEEFE 288
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31560731|ref|NP_031534.2| ATPase, H+ transporting,
lysosomal V1 subunit A [Mus musculus]
(617 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
16215 579 e-165
37977 191 9e-49
29619 130 1e-30
00590 96 4e-20
37643 69 7e-12
04005 64 2e-10
00095 49 6e-06
>16215
Length = 1251
Score = 579 bits (1492), Expect = e-165, Method: Compositional matrix adjust.
Identities = 295/402 (73%), Positives = 325/402 (80%), Gaps = 9/402 (2%)
Frame = -3
Query: 64 IQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVN 123
+QVYEETSGV+VGDPVLRTGKPLSV+LGPGIMG+IFDGIQRPL I TQSIYIP+G+N
Sbjct: 1180 VQVYEETSGVTVGDPVLRTGKPLSVQLGPGIMGSIFDGIQRPLETICDLTQSIYIPKGIN 1001
Query: 124 VSALSRDIKWEFIPSKNLRVGSHITGGDIYGIVNENSLIKHKIMLPPRNRGSVTYIAPPG 183
AL +WEFIPSK++RVGSHITGGDIYG+V EN LIKH+IMLPPR RG+VTYIAPPG
Sbjct: 1000 TPALDDHKQWEFIPSKDIRVGSHITGGDIYGMVPENILIKHRIMLPPRARGTVTYIAPPG 821
Query: 184 NYDASDVVLELEFEGVKEKFSMXXXXXXXXXXXXTEKLPANHPLLTGQRVLDALFPCVQG 243
NY +D+VLE EF+G K ++SM +EKL AN+PLLTGQRVLD+LFPCVQG
Sbjct: 820 NYTVNDIVLETEFDGQKSQYSMLQVWPVRQMRPVSEKLAANYPLLTGQRVLDSLFPCVQG 641
Query: 244 GTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVE 303
GTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEV+GK E
Sbjct: 640 GTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVEGKPE 461
Query: 304 SIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISG 363
SIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMG +VSMMADSTSRWAEALREISG
Sbjct: 460 SIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGLNVSMMADSTSRWAEALREISG 281
Query: 364 RLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSVSIVGAVSPPGGDFSDP-- 420
RLAEMPADSGYPAYLGARLASFYERAGRV CLGNP R+ SV + P
Sbjct: 280 RLAEMPADSGYPAYLGARLASFYERAGRVICLGNPIARDPSVLW---------ELCLPLV 128
Query: 421 VTSATLGIVQVFWGLDKKLAQRKHF------PSVNWLISYSK 456
VTS T + + + + P++NWLISYSK
Sbjct: 127 VTSLTR*RRRRWASCRCSGVWTRSWLSVNTSPTINWLISYSK 2
>37977
Length = 510
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 100/107 (93%)
Frame = +1
Query: 498 KASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMISFYDMARRAVET 557
K SLAE+DKITLEVAKLIKDD+LQQNGYTPYDRFCPFYKTVGML N+I+FYDM+R AVE+
Sbjct: 4 KGSLAESDKITLEVAKLIKDDYLQQNGYTPYDRFCPFYKTVGMLRNIIAFYDMSRHAVES 183
Query: 558 TAQSDNKITWSIIREHMGEILYKLSSMKFKDPVKDGEAKIKADYAQL 604
TAQS+NKITWSIIRE + ++LYKLSSMKFKDPVKDGE KI+AD+ +L
Sbjct: 184 TAQSENKITWSIIREQLSDVLYKLSSMKFKDPVKDGEPKIRADFDEL 324
>29619
Length = 356
Score = 130 bits (327), Expect = 1e-30, Method: Composition-based stats.
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +1
Query: 540 MLSNMISFYDMARRAVETTAQSDNKITWSIIREHMGEILYKLSSMKFKDPVKDGEAKIKA 599
ML N+I FYDMAR +VE+TAQS+NKITW++IRE MG I+Y+LSSMKFKDPVKDGEAKIKA
Sbjct: 1 MLKNIIDFYDMARHSVESTAQSENKITWNVIREAMGNIMYQLSSMKFKDPVKDGEAKIKA 180
Query: 600 DYAQLLEDMQNAFRSLED 617
D+ QL ED+Q AFR+LED
Sbjct: 181 DFEQLHEDLQQAFRNLED 234
>00590
Length = 2486
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 138/291 (47%), Gaps = 5/291 (1%)
Frame = +1
Query: 240 CVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVD 299
C QGG +PG K+V L + ++ I++ G E+ R F + E +
Sbjct: 88 CRQGGLVKLPG-----KSV----LDDHDDNFAIVFAAMGVN----MEIARFFKQ-DFEEN 225
Query: 300 GKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGY----HVSMMADSTSRWA 355
G +E++ L N +N P R + +T +EY M Y HV ++ S +A
Sbjct: 226 GSMENV----CLFLNLANDPTIERIITPRIALTTAEY---MAYQCEKHVLVILTDMSSYA 384
Query: 356 EALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGG 415
EALRE+S E+P G+P Y+ LA+ YERAGRV+ R GS++ + ++ P
Sbjct: 385 EALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEG-----RNGSITQIPILTMPND 549
Query: 416 DFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMR-ALDEYYDKHFTEFVP 474
D + P+ T I + +D++L R+ +P +N L S S+ M+ A+ E + V
Sbjct: 550 DITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTREDHSDVS 729
Query: 475 LRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGY 525
+ A + +D+ + +VG+ +L D + LE + +F+ Q Y
Sbjct: 730 NQLYACYAIG--KDVQAMKAVVGEEALTPEDLLYLEFLTKFEKNFISQGHY 876
>37643
Length = 1463
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Frame = -3
Query: 224 NHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT------VISQSLSKYSNSD----VII 273
P+ TG + +D+L P +G I G GKT +I+Q N++ I
Sbjct: 1398 KEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAVAVDTIINQKRLNDGNNEKQKLYCI 1219
Query: 274 YVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITL 333
YV G++ + ++++++ + MK T +V+ T++ + + Y+G +
Sbjct: 1218 YVAIGQKRSTVAQLVKRLTD---------ADAMKYTIVVSATASDAAPLQYLAPYSGCAM 1066
Query: 334 SEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA---YLGARLASFYERAG 390
E+FRD G H ++ D S+ A A R++S L P YP YL +RL ERA
Sbjct: 1065 GEFFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAA 895
Query: 391 RVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIV--QVFWGLDKKLAQRKHFPSV 448
+ + + GS++ + + GD S + + + I Q+F L+ +L + P++
Sbjct: 894 K---MNDDNGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIF--LETELFYKGIRPAI 730
Query: 449 NWLISYSK 456
N +S S+
Sbjct: 729 NVGLSVSR 706
>04005
Length = 913
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Frame = +1
Query: 341 GYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPER 400
G V + D+ R+ +A E+S L +P+ GY L + + ER K
Sbjct: 4 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK------- 162
Query: 401 EGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYM-- 458
+GS++ V A+ P D +DP + T + L + +A+ +P+V+ L S S+ +
Sbjct: 163 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDP 342
Query: 459 RALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDD 518
+ E++ K + ++ILQ+ + L +I+ ++G L+E DK+T+ A+ ++
Sbjct: 343 NIVGEHHYK-------IARAVQKILQDFKSLQDIIAILGMDELSEEDKLTVSRARKMQ-R 498
Query: 519 FLQQ 522
FL Q
Sbjct: 499 FLSQ 510
>00095
Length = 572
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = -2
Query: 337 FRDM-GYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCL 395
FRD G V + D+ R+ +A E+S L +P+ GY L + + ER
Sbjct: 385 FRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI------ 224
Query: 396 GNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYS 455
+GS++ V A+ P D +DP + T + L + +A+ +P+V+ L S S
Sbjct: 223 -TTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTS 47
Query: 456 KYM 458
+ +
Sbjct: 46 RIL 38
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|224809300|ref|NP_001029051.2| tubulin, alpha-like 3
[Mus musculus]
(446 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00276 572 e-164
12457 358 e-100
06360 244 5e-65
17215 227 7e-60
03702 226 1e-59
16482 195 2e-50
13181 167 9e-42
04882 159 3e-39
05902 138 5e-33
25015 95 5e-20
28905 84 1e-16
31457 83 3e-16
39157 80 2e-15
05688 32 0.36
04396 32 0.57
13964 30 2.7
22696 29 4.8
>00276
Length = 1330
Score = 572 bits (1475), Expect = e-164, Method: Compositional matrix adjust.
Identities = 264/358 (73%), Positives = 307/358 (85%)
Frame = -3
Query: 87 VGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERIRKLAEQCSGLQGFLIYR 146
G Y L PEQLV GKEDAAN YARG Y++G E+++LVL+RIRKLA+QC+GLQGFLI+
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 147 XXXXXXXXXXXXLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNAILTTHSTIEYSD 206
L MERLSV+Y KK KLEF +YP+P++STAVVEPYN+ILTTH+T+E+SD
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 207 CAFMVDNEALYDICQHKLGIERPSYASINRLIAQVSSSITASLRFEGPLNVDLIEFQTNL 266
CAFMVDNEA+YDIC+ L IERP+Y ++NRLI Q+ SSITASLRF+G LNVDL EFQTNL
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 267 VPYPRIHFPITALAPIISAEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGKYMACCLLY 326
VPYPRIHFP+ AP+ISAEKAY EQL V+++T +CFE +NQLVKCDPR GKYMACC+LY
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 327 RGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLS 386
RGDVVPKDVN AIA +K++ ++QFVDWCPTGFKVGINYQPP VVPGGDLA+VQRAVCMLS
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 387 NTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEKDYEEVGL 444
NTTAI EAWARLDHKFDLMYAK+AF+HWY+ EGME GEF EAREDLAALEKDYEEVG+
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGV 258
>12457
Length = 781
Score = 358 bits (919), Expect(2) = e-100, Method: Compositional matrix adjust.
Identities = 162/239 (67%), Positives = 200/239 (83%)
Frame = -1
Query: 74 FMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERIRKLA 133
+DLEPTV+D +R G Y LFHPEQLV GKEDAAN YARG Y++G E+++LVL+RIRKLA
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 134 EQCSGLQGFLIYRXXXXXXXXXXXXLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYN 193
+QC+GLQGFLI+ LLMERLSV+Y KK KLEF++YP+P++STAVVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 194 AILTTHSTIEYSDCAFMVDNEALYDICQHKLGIERPSYASINRLIAQVSSSITASLRFEG 253
+ILTTH+T+E+SDCAFMVDNEA+YDIC+ L IERP+Y ++NRLI Q+ SSITASLRF+G
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 254 PLNVDLIEFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTASCFEVSNQLVKC 312
LNVDL EFQTNLVPYPRIHFP+ AP+ISAEKAY EQL+V+++T +CFE +NQ+VKC
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKC 2
Score = 24.6 bits (52), Expect(2) = e-100, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 58 TFFHETRAGKHVPRTLFMDLEP 79
T ET AGKHVPR + P
Sbjct: 765 TPLSETGAGKHVPRAVSSXXSP 700
>06360
Length = 1896
Score = 244 bits (623), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 141/185 (76%)
Frame = -1
Query: 1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFF 60
MREC+S+H+GQAGVQ+G+ACWELYCLEHGIQPDG + + + + S +TFF
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMP-------SDKTIGGGDDSFNTFF 1552
Query: 61 HETRAGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSE 120
ET AGKHVPR +F+DLEPTV+D +R G Y LFHPEQLV GKEDAAN YARG Y++G E
Sbjct: 1551 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKE 1372
Query: 121 VIELVLERIRKLAEQCSGLQGFLIYRXXXXXXXXXXXXLLMERLSVEYCKKIKLEFSVYP 180
+++LVL+RIRKLA+QC+GLQGFLI+ LLMERLSV+Y KK KLEF++YP
Sbjct: 1371 IVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYP 1192
Query: 181 SPRIS 185
+P++S
Sbjct: 1191 APQVS 1177
>17215
Length = 632
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 102/122 (83%), Positives = 113/122 (92%)
Frame = +3
Query: 324 LLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVC 383
+LYRGDVVPKDVN AIA +K++ ++QFVDWCPTGFKVGINYQPP VVPGGDLA+VQRAVC
Sbjct: 3 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 182
Query: 384 MLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEKDYEEVG 443
MLSNTTAI EAWARLDHKFDLMYAK+AF+HWY+ EGME GEF EAREDLAALEKDYEEVG
Sbjct: 183 MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 362
Query: 444 LS 445
+
Sbjct: 363 VD 368
>03702
Length = 1932
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/153 (70%), Positives = 130/153 (84%)
Frame = +1
Query: 162 ERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEALYDICQ 221
ERLSV+Y KK KLEF++YP+P++STAVVEPYN+ILTTH+T+E+SDCAFMVDNEA+YDIC+
Sbjct: 1459 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICR 1638
Query: 222 HKLGIERPSYASINRLIAQVSSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITALAP 281
L IERP Y ++NRLI Q+ SSITASLRF+G LNVDL EFQTNLVP P P L P
Sbjct: 1639 RNLDIERPXYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTPH-PLPPGHLCP 1815
Query: 282 IISAEKAYQEQLSVSDVTASCFEVSNQLVKCDP 314
+ISAEKAY EQL+V++VT +CFE +NQLVKCDP
Sbjct: 1816 VISAEKAYHEQLTVAEVTNACFEPANQLVKCDP 1914
>16482
Length = 837
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 146/255 (57%)
Frame = +1
Query: 1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFF 60
MRE + + GQ G QIG WE+ EHGI P G H +L+ +E +N ++
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTY--HGDSDLQ---LERINV----YY 252
Query: 61 HETRAGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSE 120
+E GK+VPR + +DLEP +D +R G + +F P+ V G+ A N +A+G Y+ G+E
Sbjct: 253 NEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 432
Query: 121 VIELVLERIRKLAEQCSGLQGFLIYRXXXXXXXXXXXXLLMERLSVEYCKKIKLEFSVYP 180
+++ VL+ +RK AE C LQGF + LL+ ++ EY +I FSV P
Sbjct: 433 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 612
Query: 181 SPRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEALYDICQHKLGIERPSYASINRLIAQ 240
SP++S VVEPYNA L+ H +E +D + +DNEALYDIC L + P+Y +N L++
Sbjct: 613 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 792
Query: 241 VSSSITASLRFEGPL 255
S +T LRF G L
Sbjct: 793 TMSGVTTCLRFPGQL 837
>13181
Length = 1092
Score = 167 bits (422), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 124/225 (55%)
Frame = -3
Query: 217 YDICQHKLGIERPSYASINRLIAQVSSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPI 276
YDIC L + P+Y +N L++ S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 277 TALAPIISAEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGKYMACCLLYRGDVVPKDVN 336
AP+ S L+V ++T F+ N + CDPR G+Y+ ++RG + K+V+
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 337 EAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEAWA 396
E + ++++ S FV+W P K + PP ++ + + N+TAI E +
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFVGNSTAIQELFK 575
Query: 397 RLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEKDYEE 441
R+ +F M+ +KAFLHWY EGM+ EF EA ++ L +Y++
Sbjct: 574 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 440
>04882
Length = 1136
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 121/219 (55%)
Frame = +2
Query: 223 KLGIERPSYASINRLIAQVSSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITALAPI 282
K+ + P+Y +N L++ S +T LRF G LN DL + N+VP+PR+HF + AP+
Sbjct: 305 KI*VHTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 484
Query: 283 ISAEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGKYMACCLLYRGDVVPKDVNEAIAAM 342
S L+V ++T F+ N + CDPR G+Y+ ++RG + K+V+E + +
Sbjct: 485 TSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNV 664
Query: 343 KSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEAWARLDHKF 402
+++ S FV+W P K + PP ++ + + N+TAI E + R+ +F
Sbjct: 665 QNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQF 820
Query: 403 DLMYAKKAFLHWYITEGMELGEFVEAREDLAALEKDYEE 441
M+ +KAFLHWY EGM+ EF EA ++ L +Y++
Sbjct: 821 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 937
>05902
Length = 1127
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 158/289 (54%), Gaps = 8/289 (2%)
Frame = +2
Query: 160 LMERLSVEYCKKIKLEFSVYPS-PRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEALYD 218
L+E+L+ + KK+ +SV+P+ IS VV+PYN++LT + +DC ++DN AL
Sbjct: 65 LLEKLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNR 244
Query: 219 ICQHKLGIERPSYASINRLIAQVSSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITA 278
I +L I+ P++A +N+L++ V S+ T +LR+ G +N DLI +L+P PR+HF +T
Sbjct: 245 IAADRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTG 424
Query: 279 LAPIIS-AEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGK---YMACCLLYRGDVVPKD 334
P+ + ++ A + +V DV + N +V Y++ + +G+V P
Sbjct: 425 YTPLTTDSQVANVRKTTVLDVMRRLLQPKNMMVSTPVHRQANHCYISILNIIQGEVDPTQ 604
Query: 335 VNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEA 394
V++++ ++ R QF+ W P +V ++ + P V ++ + ML+N T+I
Sbjct: 605 VHKSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGL-----MLANHTSISHL 769
Query: 395 WARLDHKFDLMYAKKAFLHWYITEGM---ELGEFVEAREDLAALEKDYE 440
+ R+ ++D + ++AF+ + E + L EF +RE L L +Y+
Sbjct: 770 FERILRQYDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>25015
Length = 458
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 74/124 (59%)
Frame = -3
Query: 21 WELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFFHETRAGKHVPRTLFMDLEPT 80
WE+ EHGI P G H +L+ +E +N +++E GK+VPR + +DLEP
Sbjct: 360 WEVISDEHGIDPTGTY--HGDSDLQ---LERIN----VYYNEATGGKYVPRAVLVDLEPG 208
Query: 81 VIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERIRKLAEQCSGLQ 140
+D +R G + +F P+ V G+ A N +A+G Y+ G+E+++ VL+ +RK AE C LQ
Sbjct: 207 TMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQ 28
Query: 141 GFLI 144
GF +
Sbjct: 27 GFQL 16
>28905
Length = 425
Score = 84.0 bits (206), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 59/108 (54%)
Frame = -1
Query: 260 IEFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGKY 319
+ N+VP+PR+HF + AP+ S L+V ++T F+ N + CDPR G+Y
Sbjct: 395 VNVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRY 216
Query: 320 MACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPP 367
+ ++RG + K+V+E + ++++ S FV+W P K + PP
Sbjct: 215 LTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 72
>31457
Length = 1530
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%)
Frame = +3
Query: 318 KYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLAR 377
KY+ ++RG + K+V+E + ++++ S FV+W P K + PP
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------G 389
Query: 378 VQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEK 437
++ + + N+TAI E + R+ +F M+ +KAFLHWY EGM+ EF EA ++ L
Sbjct: 390 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 569
Query: 438 DYEE 441
+Y++
Sbjct: 570 EYQQ 581
>39157
Length = 488
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Frame = -1
Query: 1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFF 60
MRE + + GQ G QIG WE+ EHGI P G H +L+ +E +N ++
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTY--HGDSDLQ---LERINV----YY 291
Query: 61 HETRAGKHVPRTLFMDLEPTVIDGIRVGRYHS--LFHPEQLVNGKEDAANTYA-RGRYSV 117
+E GK+VPR + +DLEP +D +R G +F P+ V G+ A N + +
Sbjct: 290 NEATGGKYVPRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQR 111
Query: 118 GSEVIELVLERIRK 131
G+E+++ VL+ +RK
Sbjct: 110 GAELVDSVLDVVRK 69
>05688
Length = 1160
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 246 TASLRFEGPLNVDLIEFQTNLVPYPRIHFPITALAPIISA 285
T S E PLN++L ++ + P IH P+T + P+ A
Sbjct: 1021 TGSCYCETPLNINLTAYRQSRWTLPVIHMPVTWIQPVTQA 1140
>04396
Length = 1170
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = -2
Query: 259 LIEFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGK 318
L F +NL P + ITAL KAY + + S +E S ++ P +
Sbjct: 1145 LNNFPSNLHPMSQFSAAITALNSESKFAKAYADGVHKSKYWELVYEDSMDMIAKLPTVAS 966
Query: 319 YMACCLLYRGDVVP------KDVNEAIAAMKSRTSVQFVD 352
+ C LYR V P KD +E +M +F +
Sbjct: 965 IIYCN-LYRDGVTPCAIDTNKDWSENFTSMLGYKDAEFTE 849
>13964
Length = 528
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 431 DLAALEKDYEEVGL 444
DLAALEKDYEEVG+
Sbjct: 230 DLAALEKDYEEVGV 271
>22696
Length = 1194
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 7/40 (17%)
Frame = +1
Query: 9 IGQAGVQIGDACWELY-------CLEHGIQPDGFILDHQH 41
+ + V + D C LY CL+ G+ D F LDH H
Sbjct: 364 MNENNVVLHDICKYLYFVLLNYNCLQDGVNEDSFFLDHIH 483
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|34328206|ref|NP_035840.2| tryptophanyl-tRNA
synthetase [Mus musculus]
(481 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05814 573 e-164
08695 44 1e-04
>05814
Length = 1242
Score = 573 bits (1478), Expect = e-164, Method: Compositional matrix adjust.
Identities = 270/387 (69%), Positives = 323/387 (83%)
Frame = +3
Query: 88 FVDPWTVRTSSAKGIDYDKLIVQFGSSKIDKELINRIERATGQRPHRFLRRGIFFSHRDM 147
+ P ++SS KG+DYDKLIV+FGSSKID LI R+E+ TG+ H F+RRGIFFSHRDM
Sbjct: 33 YCKPLGXQSSSDKGVDYDKLIVRFGSSKIDDALIQRMEKVTGKPVHHFIRRGIFFSHRDM 212
Query: 148 NQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVIQMSDDEKYLW 207
+ +LD YE K+PFYLYTGRGPSS+AMHLGHLVPFI TKWLQDVF+VPLVIQ++DDEKYLW
Sbjct: 213 HALLDLYEKKQPFYLYTGRGPSSDAMHLGHLVPFIMTKWLQDVFDVPLVIQLTDDEKYLW 392
Query: 208 KDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYRNVVKIQKHVTFNQV 267
KDL+ ++A++ + +NAKDIIACGFD +KTFIFSD +YMG FY+ + +IQ+ VT NQ
Sbjct: 393 KDLSEDEAHALSYQNAKDIIACGFDEDKTFIFSDFDYMGGM--FYKTICRIQRRVTNNQA 566
Query: 268 KGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDRTDIQCLIPCAIDQDPYFRMTRDV 327
GIFGFT IGK SFPA+QAAPSFS+SFP IF + ++ CLIPCAIDQDPYFRMTRDV
Sbjct: 567 WGIFGFTGESNIGKNSFPAIQAAPSFSSSFPDIFNCKXNVPCLIPCAIDQDPYFRMTRDV 746
Query: 328 APRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKSKVNKHAFSGGRDT 387
APR+G+PKPAL+HS FFPALQG +TKMSAS+P SSIFLTD KQIK K+NK+AFSGGRDT
Sbjct: 747 APRLGYPKPALMHSKFFPALQGPKTKMSASEPASSIFLTDKPKQIKDKINKYAFSGGRDT 926
Query: 388 VEEHRQFGGNCEVDVSFMYLTFFLEDDDRLEQIRKDYTSGAMLTGELKKTLIDVLQPLIA 447
EEHR++GGNCEVDVSF YL FFL+DD++LE+IR+DYTSG +LTG LKK LI VLQ LI
Sbjct: 927 AEEHRKYGGNCEVDVSFQYLRFFLDDDEKLEKIRQDYTSGELLTGFLKKELITVLQKLIG 1106
Query: 448 EHQARRKAVTEETVKEFMTPRQLSFHF 474
EHQ RR VT+E VK +MTPR+L + F
Sbjct: 1107EHQERRAKVTDEMVKRYMTPRKLKYDF 1187
>08695
Length = 861
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +1
Query: 14 LELFNSIATQGELVRSLKAGNAPKDEIDSAVKMLLSLKVSYKAAMGEEYKAG 65
L L + QG+ VR LK G A K+E+D+AVK LL LK +K G + G
Sbjct: 265 LALKAEVDAQGDKVRQLKTGGAAKEEVDAAVKKLLELKGKFKDLTGTDVAGG 420
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
Frame = +1
Query: 38 DEIDSAVKMLLSLKVSYKAAMGEEY---KAGCPPGN-------PTAGRNCDSDATKA 84
+EID+AVK+LLSLK YK A G+++ KAG P P G N D+ +A
Sbjct: 94 EEIDAAVKVLLSLKKQYKEATGKDWTPPKAGSSPAKTAQPAAMPAVGGNAAVDSPEA 264
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|161484668|ref|NP_766295.2| protein phosphatase 1,
catalytic subunit, beta isoform [Mus musculus]
(327 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01173 571 e-163
06264 555 e-159
19040 300 6e-82
08242 274 4e-74
06084 225 2e-59
18336 164 2e-58
04295 188 2e-48
25536 144 6e-35
21146 61 6e-10
30980 59 2e-09
36367 57 7e-09
18967 53 2e-07
17953 41 8e-04
01222 28 6.0
05700 27 9.0
>01173
Length = 2619
Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/295 (91%), Positives = 286/295 (96%)
Frame = -1
Query: 25 KIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEA 84
K VQ+TE+E+RGLC+KSREIFLSQPILLELEAPLKICGDIHGQY DLLRLFEYGGFPPE+
Sbjct: 2619 KNVQLTESEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 2440
Query: 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN 144
NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR+N
Sbjct: 2439 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 2260
Query: 145 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLL 204
IKLWKTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPD GLLCDLL
Sbjct: 2259 IKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 2080
Query: 205 WSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVT 264
WSDPDK+ GWGENDRGVSFTFGA+VV+KFL++HDLDLICRAHQVVEDGYEFFAKRQLVT
Sbjct: 2079 WSDPDKETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVT 1900
Query: 265 LFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPR 319
LFSAPNYCGEFDNAG MMSVDETLMCSFQILKP++KK K+ YGGLN GRPVTPPR
Sbjct: 1899 LFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK-KFPYGGLNQGRPVTPPR 1738
>06264
Length = 999
Score = 555 bits (1431), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/295 (89%), Positives = 281/295 (95%)
Frame = -3
Query: 33 EVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDY 92
E+RGLC+KSREIFLSQPILLELEAPLKICGDIHGQY DLLRLFEYGGFPPE+NYLFLGDY
Sbjct: 997 EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDY 818
Query: 93 VDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFT 152
VDRG+QSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR+NIKLWKTFT
Sbjct: 817 VDRGRQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFT 638
Query: 153 DCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDV 212
DCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPD GLLCDLLWSDPDK+
Sbjct: 637 DCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKET 458
Query: 213 QGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC 272
GWGE+DRGVSFTFGA+VV+KFL++HDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC
Sbjct: 457 MGWGESDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYC 278
Query: 273 GEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRTANPPKKR 327
GEFDNAG MMSVDETLMCSFQILKP++KK K+ YGGL+ GRPVTPPR K +
Sbjct: 277 GEFDNAGAMMSVDETLMCSFQILKPADKK-KFPYGGLSXGRPVTPPRGNAKAKGK 116
>19040
Length = 452
Score = 300 bits (768), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 141/150 (94%), Positives = 146/150 (97%)
Frame = -3
Query: 35 RGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVD 94
RGLC+KSREIFL QPILLELEAPL ICGDIHGQYTDLLRLFEYGGFPP ANYLFLGDYVD
Sbjct: 450 RGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYVD 271
Query: 95 RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDC 154
RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR+N+KLWKTFTDC
Sbjct: 270 RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLWKTFTDC 91
Query: 155 FNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 184
FNCLP+AAI+DEKIFCCHGGLSPDLQ MEQ
Sbjct: 90 FNCLPVAAIIDEKIFCCHGGLSPDLQGMEQ 1
>08242
Length = 3368
Score = 274 bits (700), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 191/273 (69%), Gaps = 1/273 (0%)
Frame = -1
Query: 43 EIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLET 102
EI + + + +++P+ +CGDIHGQ+ DL LF+ GG P+ NYLF+GD+VDRG S+ET
Sbjct: 3368 EILVEESNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPDTNYLFMGDFVDRGFYSVET 3189
Query: 103 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIA 161
LLLA K++YP+ L+RGNHE I ++YGFYDEC R++ +I +W+ T+ F+ L ++
Sbjct: 3188 FLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLS 3009
Query: 162 AIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRG 221
AI+D KIFC HGGLSP +Q+++QIR I R +VP G +CDLLWSDP+ D+QGWG + RG
Sbjct: 3008 AIIDGKIFCVHGGLSPSIQTLDQIRSIDRKQEVPHDGPMCDLLWSDPE-DMQGWGVSPRG 2832
Query: 222 VSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGM 281
+ FG+DVVS+F + +DLICRAHQ+V +GY++ ++T++SAPNYC N +
Sbjct: 2831 AGYLFGSDVVSQFNAANXIDLICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAI 2652
Query: 282 MSVDETLMCSFQILKPSEKKAKYQYGGLNSGRP 314
+ +DE L F I + + ++A+ G+ S +P
Sbjct: 2651 LELDEHLQRDFTIFEAAPQEAR----GIPSKKP 2565
>06084
Length = 1739
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/260 (45%), Positives = 162/260 (62%), Gaps = 1/260 (0%)
Frame = -2
Query: 65 HGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 124
HGQ+ DL+ LF+ GG P+ NY+F+GD+VDRG SLET LLL K K+P+ LLRGNH
Sbjct: 1738 HGQFYDLMELFKTGGEMPDTNYVFMGDFVDRGYFSLETFTLLLTLKAKWPDKIVLLRGNH 1559
Query: 125 ECASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSME 183
E I +IYGFYDEC+ ++ N W+ F+ L IAAI+DE I C HGGLSPD+++++
Sbjct: 1558 ESRQITQIYGFYDECQTKYGNANAWRYCCRVFDLLTIAAIIDECILCVHGGLSPDIKTID 1379
Query: 184 QIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLI 243
QIR I R ++P G CDL+WSDP+ DV W + RG + FGA V ++F+ ++L LI
Sbjct: 1378 QIRTIERNQEIPHKGAFCDLVWSDPE-DVDTWAMSPRGAGWLFGAKVTAEFVASNNLKLI 1202
Query: 244 CRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 303
CRAHQ+V +GY++ +LVT++SAPNYC N ++S + +E
Sbjct: 1201 CRAHQLVHEGYKYMFDEKLVTVWSAPNYCYRCGNIAAVLSFTD-----------AEHHEA 1055
Query: 304 YQYGGLNSGRPVTPPRTANP 323
+ + V PPRT P
Sbjct: 1054 KLFKAVPDSERVIPPRTQTP 995
>18336
Length = 465
Score = 164 bits (414), Expect(3) = 2e-58, Method: Compositional matrix adjust.
Identities = 82/111 (73%), Positives = 88/111 (79%)
Frame = +2
Query: 25 KIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEA 84
K VQ++E + SR I L + + ICGDIHGQY DLLRLFEYGGFPPE+
Sbjct: 2 KNVQLSEQK*EAYV*ISRNI-LESAYSFRIRSTT*ICGDIHGQYYDLLRLFEYGGFPPES 178
Query: 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 135
NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF
Sbjct: 179 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 331
Score = 72.8 bits (177), Expect(3) = 2e-58, Method: Compositional matrix adjust.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +1
Query: 136 YDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIF 169
YDECKRR+NIKLWKTFTDCFNCLPIAAI+D KIF
Sbjct: 331 YDECKRRYNIKLWKTFTDCFNCLPIAAIIDVKIF 432
Score = 28.9 bits (63), Expect(3) = 2e-58, Method: Compositional matrix adjust.
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 169 FCCHGGLSPDLQ 180
CCHGGLSPDLQ
Sbjct: 429 LCCHGGLSPDLQ 464
>04295
Length = 748
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = -1
Query: 228 ADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDET 287
DVVSKFLNRHDLDLI RAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDET
Sbjct: 748 GDVVSKFLNRHDLDLITRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDET 569
Query: 288 LMCSFQILKPSEKKAKYQYGGLNSGRPVTPPR 319
LMCSFQILKPSEKKAKYQYGGLNSGRP+TPP+
Sbjct: 568 LMCSFQILKPSEKKAKYQYGGLNSGRPITPPK 473
>25536
Length = 486
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Frame = +1
Query: 28 QMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYL 87
Q++E +V+ LC K++EI + + E++ P+ +CGD+HGQ+ DL+ LF GG P+ NYL
Sbjct: 106 QLSENQVKTLCEKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 285
Query: 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NIK 146
F+GDYVDRG S+ET+ LL+A K+++ + +LRGNHE I ++YGFYDEC R++ N
Sbjct: 286 FMGDYVDRGYYSVETVSLLVALKVRFRDRITILRGNHESRQITQVYGFYDECLRKYGNAN 465
Query: 147 LWKTFTD 153
+WK FTD
Sbjct: 466 VWKYFTD 486
>21146
Length = 408
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = +3
Query: 198 GLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQ-VVEDGYEF 256
G +CDLLWSDPD D GWG + RG +TFG D+ F + + L LI RAHQ V+E + F
Sbjct: 117 GPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHSNGLTLISRAHQLVMEVMFWF 293
Query: 257 FAKRQLVTLF--SAPNY 271
Q L+ S NY
Sbjct: 294 VTGMQTCLLYELSLQNY 344
>30980
Length = 765
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +3
Query: 234 FLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQ 293
F + + L LI RAHQ+V +GY + R +VT+FSAPNYC N +M +D+ L SF
Sbjct: 6 FNHSNGLTLISRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDALKYSFL 185
Query: 294 ILKPSEKKAK 303
P+ ++ +
Sbjct: 186 QFDPAPRRGE 215
>36367
Length = 827
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 20/132 (15%)
Frame = +1
Query: 172 HGGL-SPDLQS---MEQIRRIMRPTDVP--DTGLLCDLLWSDPD-------------KDV 212
HGG+ SP+ + +E I +I P P D+ + ++LWSDP K+
Sbjct: 1 HGGIPSPENEGGGHLEAINKIPVPLSDPEVDSPMAWEILWSDPISVDLVSPEVLKDMKEH 180
Query: 213 QGWGENDR-GVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNY 271
G+ N R G + F + + FL R+ L + RAH+V E G++ + +L+T+FS+ Y
Sbjct: 181 HGFTFNSRRGTAHFFSCNALLAFLERNGLSHVIRAHEVQEVGFQVQQQGKLLTVFSSSRY 360
Query: 272 CGEFDNAGGMMS 283
CG + A +++
Sbjct: 361 CGGSNEAACVLA 396
>18967
Length = 440
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2
Query: 240 LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVD 285
LDLICRAHQ+V +G ++ + +LVT++SAPNYC N ++S +
Sbjct: 2 LDLICRAHQLVNEGIKYMFEGKLVTVWSAPNYCYRCGNVAAILSFE 139
>17953
Length = 626
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = -2
Query: 235 LNRHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPNYCGEFDNAGGMMSV 284
L +++L I RAH+ + GY + K Q L+T+FSAPNY ++N ++S
Sbjct: 625 LQQNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKVQLLST 458
>01222
Length = 744
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 118 FLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLP-IAAIVDEKIFCC 171
F + NH C S ++Y + + NIKLW + C+ + V+E++F C
Sbjct: 707 FTIHSNHICRSRRKLYTEINPQHVKINIKLWHPTQFFYLCIMYVCRRVNEQVFVC 543
>05700
Length = 913
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 52 LELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANY 86
L L + + IC IH Y+DL+ F+ FPP Y
Sbjct: 719 LALSSCISIC--IHHNYSDLVLCFQCFSFPPYL*Y 817
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|34419622|ref|NP_570951.2| poly(A) binding protein,
cytoplasmic 4 isoform 1 [Mus musculus]
(660 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
17775 570 e-163
39438 134 8e-32
25691 74 2e-13
17681 74 2e-13
20488 67 2e-11
03744 67 2e-11
28652 66 3e-11
11687 62 5e-10
08958 60 2e-09
16427 59 9e-09
30672 57 3e-08
14258 56 5e-08
14637 56 6e-08
02343 55 7e-08
13457 45 2e-07
13822 54 3e-07
31310 52 5e-07
01278 52 7e-07
02502 50 2e-06
02140 50 4e-06
28455 49 9e-06
19868 48 2e-05
15371 47 2e-05
03000 47 2e-05
02064 47 3e-05
00029 46 4e-05
00302 45 1e-04
03903 44 2e-04
28605 43 4e-04
09736 42 7e-04
03200 42 8e-04
02091 42 0.001
00556 41 0.001
20169 41 0.002
12506 41 0.002
33516 40 0.002
02809 40 0.004
03059 39 0.004
10194 39 0.008
32386 38 0.010
03406 38 0.014
26197 38 0.014
31618 37 0.018
02347 37 0.023
05987 36 0.038
01065 36 0.045
00738 35 0.064
32733 35 0.079
15503 35 0.094
08670 35 0.12
00781 34 0.15
23322 34 0.20
25950 34 0.22
29364 34 0.24
04988 34 0.24
11019 34 0.24
12350 33 0.25
23720 33 0.27
11126 33 0.31
31265 33 0.34
03097 32 0.66
39789 32 0.71
19980 32 0.98
11579 32 1.1
25632 31 1.3
28372 31 1.4
19733 31 1.7
29083 30 3.0
00741 30 3.0
30934 30 3.1
35379 30 3.6
12096 30 3.8
33791 29 4.7
23250 29 5.7
01937 29 6.8
19556 29 6.8
12593 29 7.8
>17775
Length = 1282
Score = 570 bits (1468), Expect = e-163, Method: Compositional matrix adjust.
Identities = 283/407 (69%), Positives = 326/407 (80%), Gaps = 1/407 (0%)
Frame = -2
Query: 1 MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ 60
MN SYPMASLYVGDLH DVTEAML+EKFS AGPVLSIRVCRDMITRRSLGYAYVNFQ
Sbjct: 1224 MNNPGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ 1045
Query: 61 QPADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS 120
QPADAERALDTMNFD +KG+PIRIMWSQRDPS+RKSGVGNVFIKNLDK+IDNKALYDTFS
Sbjct: 1044 QPADAERALDTMNFDTVKGRPIRIMWSQRDPSVRKSGVGNVFIKNLDKTIDNKALYDTFS 865
Query: 121 AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE 180
AFGNILSCK+ CDE GSKGY FVHFET+EAA +AI+K+NGMLLN +KV+VGRF RKER
Sbjct: 864 AFGNILSCKIACDEQGSKGYGFVHFETEEAARQAIDKVNGMLLNGKKVYVGRFIPRKERI 685
Query: 181 AELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT-LSVKVMRDXXXXXXXXXXVSYE 239
+G K K F NVY+KNF L Q + L R VS+E
Sbjct: 684 MMMGDKLKRFNNVYVKNFC*GTG*RPAA*LVWQARQDHLXXGACRGEDGKSRGFGFVSFE 505
Query: 240 KHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIK 299
+ E A KAV+E+NG E+SG+ I+ GRAQK+ ERQAELK +FE++K ERI+RYQGVNLY+K
Sbjct: 504 EPEGAEKAVDEINGTEVSGRIIYCGRAQKRAERQAELKERFEKIKLERINRYQGVNLYVK 325
Query: 300 NLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 359
NLDD+IDDE+LR+EFS FG+ITSAK+M E GRSKGFGFVCFSSPEEATKAVTEMNGRI+
Sbjct: 324 NLDDSIDDERLRKEFSNFGTITSAKIMTEGGRSKGFGFVCFSSPEEATKAVTEMNGRIIV 145
Query: 360 SKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAG 406
+KPLYVALAQRKE+R+A L ++YMQ +A +R ++ FQ A G
Sbjct: 144 AKPLYVALAQRKEDRRAQLASRYMQHMANLRQQQSAQFSQMFQAAPG 4
>39438
Length = 2557
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 73/78 (93%)
Frame = +2
Query: 562 VHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHM 621
V + GQEPLTASMLAAAPPQEQKQMLGERLFPLIQ M+ +LAGKITGMLLEIDNSELLHM
Sbjct: 191 VVIPGQEPLTASMLAAAPPQEQKQMLGERLFPLIQRMYPDLAGKITGMLLEIDNSELLHM 370
Query: 622 LESPESLRSKVDEAVAVL 639
LES ESL++KV+EAVAVL
Sbjct: 371 LESQESLKAKVEEAVAVL 424
>25691
Length = 768
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 76/126 (60%), Gaps = 2/126 (1%)
Frame = -2
Query: 39 SIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGV 98
+ ++ RD T +SLGY +VN+++ DA++A+ T+N ++ K I++ ++ PS
Sbjct: 434 TCKLIRDKPTGQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLAR--PSCESIKG 261
Query: 99 GNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIE 156
N++I L KS+ L + F+ GNI++ +++ D+ SKG F+ F+ + A++AI+
Sbjct: 260 ANLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIEAERAIQ 81
Query: 157 KMNGML 162
K+N +
Sbjct: 80 KLNNHI 63
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = -2
Query: 236 VSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVN 295
V+Y++ EDA+KA+ +NG + K I V A+ E +G N
Sbjct: 380 VNYKRQEDADKAIHTLNGLRLQNKTIKVSLARPSCE------------------SIKGAN 255
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM 353
LYI L ++ L F+ G+I +++++ + G SKG GF+ F EA +A+ ++
Sbjct: 254 LYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIEAERAIQKL 75
Query: 354 NGRI 357
N I
Sbjct: 74 NNHI 63
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Frame = -2
Query: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
+CK++ D+ S GY FV+++ QE ADKAI +NG+ L ++ + V +R E+ G
Sbjct: 434 TCKLIRDKPTGQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSL--ARPSCESIKG 261
Query: 185 AKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXXX-VSYEKHED 243
A N+YI + + +L+ LF+ G ++ +++ D + +++ +
Sbjct: 260 A------NLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIE 99
Query: 244 ANKAVEEMN 252
A +A++++N
Sbjct: 98 AERAIQKLN 72
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = -2
Query: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
G+S G+GFV + E+A KA+ +NG + +K + V+LA+
Sbjct: 404 GQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLAR 285
>17681
Length = 964
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 45/205 (21%)
Frame = +2
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
++VGDL ++ L E F+P G + + R+ RD T +S GYA+V+F + A+AE A+ M
Sbjct: 38 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAM 217
Query: 73 NFDVMKGKPIRIMWSQRD-PSLRKSG-----------------VGNVFIKNLDKS----- 109
N + + IR WS R P R+S IKN +
Sbjct: 218 NGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGCGGGAGNGIKNNQRHTFEEV 397
Query: 110 --------------------IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
I ++ ++ F FG I +V D KG+AF+ F T+E
Sbjct: 398 YNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD----KGFAFIKFVTKE 565
Query: 150 AADKAIE--KMNGMLLNDRKVFVGR 172
AA +AIE ++ + N K F G+
Sbjct: 566 AAARAIEHTHISEVHGNHVKCFWGK 640
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +2
Query: 295 NLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 352
++++ +L I+ E LR F+PFG I++ +++ + +SKG+ FV F EA A+
Sbjct: 35 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQA 214
Query: 353 MNGRIVGSKPLYVALAQRK 371
MNG+ +GS+ + + RK
Sbjct: 215 MNGQWIGSRSIRTNWSTRK 271
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +2
Query: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQ 148
P S ++F+ +L I+ + L + F+ FG I +C++V D SKGYAFV F +
Sbjct: 8 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 187
Query: 149 EAADKAIEKMNGMLLNDRKV 168
A+ AI+ MNG + R +
Sbjct: 188 AEAENAIQAMNGQWIGSRSI 247
>20488
Length = 3281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +2
Query: 293 GVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAV 350
G NL+I +L D+ L + F PFG++ SAKV ++ SK FGFV + SP A A+
Sbjct: 2705 GANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAI 2884
Query: 351 TEMNGRIVGSKPLYVALAQRKEER 374
T MNG +G K L V L + K ++
Sbjct: 2885 TSMNGFQIGMKRLKVQLKRSKNDK 2956
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +2
Query: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEK 157
N+FI +L + ++ L F FGN++S KV D+ N SK + FV +++ AA AI
Sbjct: 2711 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAITS 2890
Query: 158 MNGMLLNDRKVFVGRFKSRKER 179
MNG + +++ V +S+ ++
Sbjct: 2891 MNGFQIGMKRLKVQLKRSKNDK 2956
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 192 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXX-XVSYEKHEDANKAVEE 250
N++I + +E D +L ++F FG +S KV D VSY+ A A+
Sbjct: 2711 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAITS 2890
Query: 251 MNGKEMSGKAIFVGRAQKKVER 272
MNG ++ K + V + K ++
Sbjct: 2891 MNGFQIGMKRLKVQLKRSKNDK 2956
>03744
Length = 3486
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -1
Query: 287 RISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLED--GRSKGFGFVCFSSPE 344
R+ G NL+I +L D+ L + F PFG++ SAKV ++ SK FGFV + SP
Sbjct: 3237 RVPGPDGANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPL 3058
Query: 345 EATKAVTEMNGRIVGSKPLYVALAQRKEER 374
A A+T MNG +G K L V L + K ++
Sbjct: 3057 AAQAAITSMNGFQIGMKRLKVQLKRSKNDK 2968
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = -1
Query: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEK 157
N+FI +L + ++ L F FGN++S KV D+ N SK + FV +++ AA AI
Sbjct: 3213 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAITS 3034
Query: 158 MNGMLLNDRKVFVGRFKSRKER 179
MNG + +++ V +S+ ++
Sbjct: 3033 MNGFQIGMKRLKVQLKRSKNDK 2968
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -1
Query: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXX-XVSYEKHEDANKAVE 249
N++I + +E D +L ++F FG +S KV D VSY+ A A+
Sbjct: 3216 ANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAIT 3037
Query: 250 EMNGKEMSGKAIFVGRAQKKVER 272
MNG ++ K + V + K ++
Sbjct: 3036 SMNGFQIGMKRLKVQLKRSKNDK 2968
>28652
Length = 918
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 18/269 (6%)
Frame = -2
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
++ G + D+ E L F G + +R+ D ++ + GY +V + A A+
Sbjct: 725 VFCGKIPRDIFEDELIPLFEDCGTIWDLRLMMDPVSNLNRGYCFVTYTTKEAAAEAVKQH 546
Query: 73 N-FDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
+ +++ KGK +++ S P+LR +F+ N+ KS + + F L +V
Sbjct: 545 DGYEIRKGKKLKVNISI--PNLR------LFVGNIPKSKTKEEILKEFEKHSEGLMDVIV 390
Query: 132 CDENGS-----KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKS----------- 175
+ +G+AF+ ++T + A A R+ GRF+
Sbjct: 389 YGSADNPKLKNRGFAFLEYDTHKNASAA----------KRRFTTGRFRVWQCDVIVDWAD 240
Query: 176 -RKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXX 234
++E E +K K +Y++N +V + +LKE F +GK VK ++D
Sbjct: 239 LQEEPNEETMSKVKV---LYVRNLTGDVTEDDLKEKFGAYGKVERVKKIKD-------YG 90
Query: 235 XVSYEKHEDANKAVEEMNGKEMSGKAIFV 263
V YE EDA KA+++++G+++ I V
Sbjct: 89 FVHYEDREDALKALDDLHGEKIGNLEIDV 3
>11687
Length = 676
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Frame = +3
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNF---QQPADAERAL 69
++VG + ++ E L + F GPV S+ + RD T +S G +V F + DA+ AL
Sbjct: 156 MFVGQIPRNMDENELRKMFEDYGPVHSLNILRDKNTGQSKGCCFVTFFTRKAALDAQNAL 335
Query: 70 DTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNV-----FIKNLDKSIDNKALYDTFSAFGN 124
+ M P+++ + S +++G NV F+ L K + + F +FG+
Sbjct: 336 HNVKTMPMMHHPVQMKPAD---SEKRNGERNVEERKLFVGMLSKKLSENDVRMLFESFGS 506
Query: 125 ILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMN 159
I C V+ D NG S+G AF+ F +++ A +I+ M+
Sbjct: 507 IDDCTVLRDSNGTSRGCAFITFASRQCAMNSIKGMH 614
>08958
Length = 680
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Frame = +2
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA-LDT 71
L+VG+L DV+E + FSP G V V + R G+ ++++ A+A +A LD
Sbjct: 74 LFVGNLTPDVSEDDFKKLFSPFGEVSEAYVN----SGRGFGFIRLDYRHNAEAAKAALDG 241
Query: 72 MNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
+ KG+ +R+ ++ +L+ +KNL + N+ L F+ FG++ V+
Sbjct: 242 LQ---RKGRSLRVRYATHGAALK--------VKNLHPYVSNELLEQAFTQFGDLERAIVI 388
Query: 132 CDENG-SKGYAFVHFETQEAADKAIEKMN-GMLL 163
DE G S G V F + A +A+ ++N G+ L
Sbjct: 389 VDERGRSTGEGVVEFVRKPGAQQALRRINEGVFL 490
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%)
Frame = +2
Query: 96 SGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAI 155
+G +F+ NL + FS FG + V N +G+ F+ + + A+ A
Sbjct: 59 TGRCRLFVGNLTPDVSEDDFKKLFSPFGEVSEAYV----NSGRGFGFIRLDYRHNAEAAK 226
Query: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFG 215
++G+ R + V R A GA K +KN V + L++ F+QFG
Sbjct: 227 AALDGLQRKGRSLRV--------RYATHGAALK------VKNLHPYVSNELLEQAFTQFG 364
Query: 216 KTLSVKVMRDXXXXXXXXXXVSYEKHEDANKAVEEMN 252
V+ D V + + A +A+ +N
Sbjct: 365 DLERAIVIVDERGRSTGEGVVEFVRKPGAQQALRRIN 475
>16427
Length = 1313
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = +1
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGR--SKGFGFVCFSSPEEATKAVTEM 353
L++ L + ID++ L REFS FG IT + V+ + R S+GFGFV + +P +A +AV M
Sbjct: 142 LFVGGLAEEIDEKVLEREFSKFGRITESMVIRDKVRQVSRGFGFVTYENPMDAEEAVKHM 321
Query: 354 NGRIVGSKPLYVALAQR 370
+G+ + K L+V A R
Sbjct: 322 DGKEILGKKLHVEDAVR 372
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 193 VYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXXX-VSYEKHEDANKAVEEM 251
+++ EE+D+ L+ FS+FG+ V+RD V+YE DA +AV+ M
Sbjct: 142 LFVGGLAEEIDEKVLEREFSKFGRITESMVIRDKVRQVSRGFGFVTYENPMDAEEAVKHM 321
Query: 252 NGKEMSGKAIFV 263
+GKE+ GK + V
Sbjct: 322 DGKEILGKKLHV 357
>30672
Length = 877
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = +3
Query: 277 KRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDG-RSKGF 335
K+K +Q KQE R L I+NL + +R F FG+I+ + L+ G RS+GF
Sbjct: 363 KKKTKQPKQELGKR---CRLIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQGDRSRGF 533
Query: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 384
FV F+ + A KA+++MNG + +P+ V A K+ +A T Q Q
Sbjct: 534 AFVQFTEVKAAQKAISDMNGTAIMDRPVAVDWAVAKDRFEAS-TQQNQQ 677
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 75/205 (36%), Gaps = 46/205 (22%)
Frame = +3
Query: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
+L+V +L + + L E F GP+ + V + G+ YV F DA +A DT
Sbjct: 15 TLFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLEDAIKAKDT 194
Query: 72 MNFDVMKGKPIRIMWSQRDPSLRKS-----------GVGN-------------------- 100
+ G+ I + ++ S + G+G
Sbjct: 195 VTH--CSGRKISLSFADTKKSWKTKQKGGTETSDALGLGKKLPSQTAVTDGEPNPKPEKK 368
Query: 101 --------------VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE-NGSKGYAFVHF 145
+ I+NL + F FG I + + + S+G+AFV F
Sbjct: 369 KTKQPKQELGKRCRLIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQGDRSRGFAFVQF 548
Query: 146 ETQEAADKAIEKMNGMLLNDRKVFV 170
+AA KAI MNG + DR V V
Sbjct: 549 TEVKAAQKAISDMNGTAIMDRPVAV 623
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 292 QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKA 349
Q L+++NL +EKL F G + +A V+ E G+ +GFG+V FS E+A KA
Sbjct: 6 QSKTLFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLEDAIKA 185
Query: 350 ---VTEMNGRIV 358
VT +GR +
Sbjct: 186 KDTVTHCSGRKI 221
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 41/93 (44%)
Frame = +3
Query: 174 KSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXX 233
K K+ + ELG + + + I+N + + +++ F +FG V +
Sbjct: 366 KKTKQPKQELGKRCR----LIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQGDRSRGF 533
Query: 234 XXVSYEKHEDANKAVEEMNGKEMSGKAIFVGRA 266
V + + + A KA+ +MNG + + + V A
Sbjct: 534 AFVQFTEVKAAQKAISDMNGTAIMDRPVAVDWA 632
>14258
Length = 1063
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 305 IDDEKLRREFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 362
+ D+ L + F PFG++ SAKV ++ SK FGFV + SP A A++ MNG +G K
Sbjct: 95 VGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISSMNGFQIGMKR 274
Query: 363 LYVALAQRKEER 374
L V L + K ++
Sbjct: 275 LKVQLKRPKNDK 310
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 202 VDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXX-XVSYEKHEDANKAVEEMNGKEMSGKA 260
V D +L ++F FG +S KV D VSY+ A A+ MNG ++ K
Sbjct: 95 VGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISSMNGFQIGMKR 274
Query: 261 I 261
+
Sbjct: 275 L 277
>14637
Length = 455
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = -1
Query: 293 GVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAV 350
G NL+I +L D+ L + F PFG++ SAKV ++ SK FGFV + SP A A+
Sbjct: 206 GSNLFIYHLPQEFGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAI 27
Query: 351 TEMNG 355
+ MNG
Sbjct: 26 SSMNG 12
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -1
Query: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEK 157
N+FI +L + ++ L F FGN++S KV D+ N SK + FV +++ +A AI
Sbjct: 200 NLFIYHLPQEFGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISS 21
Query: 158 MNGMLL 163
MNG L
Sbjct: 20 MNGFRL 3
>02343
Length = 1715
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Frame = -2
Query: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
+LY+ L + T+ L G + S + D T + GY +V+F P AERA+
Sbjct: 1264 TNLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQ 1085
Query: 71 TMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
+ ++ + + ++DP+ N++I NL K L F +G ++S ++
Sbjct: 1084 ALQAQGIQAQMAK--QQEQDPT-------NLYIANLPLHFTEKHLEGLFKDYGTVISTRI 932
Query: 131 VCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLN 164
+ +G S+ F E+++ D I N +++
Sbjct: 931 LRKPDGISRCVGFARMESRDKCDTVINTFNNKMIS 827
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = -2
Query: 294 VNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVT 351
NLYI+ L D+ L FG+ITS K +++ + KG+GFV F +P A +AV
Sbjct: 1264 TNLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQ 1085
Query: 352 EMNGRIVGSKPLYVALAQRKEERKAHL 378
+ + + ++ +A+++E+ +L
Sbjct: 1084 ALQAQGIQAQ-----MAKQQEQDPTNL 1019
>13457
Length = 4857
Score = 38.5 bits (88), Expect(2) = 2e-07, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -3
Query: 274 AELKRKFEQLKQERISRY-QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE 328
A+ +RK + E R +G NL+I +L D +L + F PFG++ SAKV ++
Sbjct: 2485 ADAQRKIVLERAELTDRGPEGCNLFIYHLPQXXGDAELAQMFVPFGNVISAKVYVD 2318
Score = 35.0 bits (79), Expect(2) = 2e-07, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 335 FGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
FGFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 2294 FGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 2166
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -1
Query: 85 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFV 143
+W + P + +F+ L+K + + F +G I C ++ D+NG SKG AFV
Sbjct: 3450 VWCRLTPKMTIGEDRKLFVGMLNKQQTEEDVRQLFHPYGAIEECTILRDQNGNSKGCAFV 3271
Query: 144 HFETQEAADKAIEKMNG 160
+ T A AI ++G
Sbjct: 3270 KYSTHSEAQAAINALHG 3220
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD 133
N+FI +L + + L F FGN++S KV D
Sbjct: 2419 NLFIYHLPQXXGDAELAQMFVPFGNVISAKVYVD 2318
>13822
Length = 963
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = -1
Query: 266 AQKKVERQAELKRKFE----QLKQERISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSIT 321
A VE+ E+ E Q+ + IS L++ N+ + LR+ PFG+I
Sbjct: 438 ANGTVEQSTEVNSDGEVQGVQVPPQAISPEGPKRLHVSNIPFRFREADLRQLLGPFGTIL 259
Query: 322 SAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365
+++ + SKGFGFV F+ EA +A +MNG +V + + V
Sbjct: 258 DVEIIFNERGSKGFGFVTFAHSAEAERARDKMNGTVVEGRKIEV 127
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = -1
Query: 92 SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAA 151
++ G + + N+ L FG IL +++ +E GSKG+ FV F A
Sbjct: 363 AISPEGPKRLHVSNIPFRFREADLRQLLGPFGTILDVEIIFNERGSKGFGFVTFAHSAEA 184
Query: 152 DKAIEKMNGMLLNDRKVFVGRFKSR 176
++A +KMNG ++ RK+ V +R
Sbjct: 183 ERARDKMNGTVVEGRKIEVNNATAR 109
>31310
Length = 469
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Frame = -3
Query: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
M +YVG ++ ++ E + + F P GP+ S+ + D IT + G++++ + P A+ AL
Sbjct: 326 MCRIYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLAL 147
Query: 70 DTMNFDVMKGKPIRI 84
+ MN ++ G+ I++
Sbjct: 146 EQMNGVMIGGRNIKV 102
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Frame = -3
Query: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYAFVHFETQEAADKAIEKM 158
+++ +++ I + F FG I S + D N KG++F+ ++ EAA A+E+M
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 159 NGMLLNDRKVFVGRFKSRKERE---AELGAKAKEFTNVYI 195
NG+++ R + VGR + + + +L +A + +YI
Sbjct: 137 NGVMIGGRNIKVGRPSNMPQAQPIIEQLAMEATHYFRIYI 18
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = -3
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
+Y+ +++ I ++ +++ F PFG I S + + + KGF F+ + PE A A+ +M
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 354 NGRIVGSKPLYV 365
NG ++G + + V
Sbjct: 137 NGVMIGGRNIKV 102
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 193 VYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-XXXXXXXXXXVSYEKHEDANKAVEEM 251
+Y+ + E+ + +K+ F FG SV + D + Y+ E A A+E+M
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 252 NGKEMSGKAIFVGR 265
NG + G+ I VGR
Sbjct: 137 NGVMIGGRNIKVGR 96
>01278
Length = 1082
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +2
Query: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
A++ V +L D E+ L E F P GP+ I + +D +T +S G+A++NF + DA RA+
Sbjct: 635 ATIRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDASRAI 811
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAA 151
RK + + NL + L + F FG I + D+ SKG+AF++F +E A
Sbjct: 620 RKDEAATIRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDA 799
Query: 152 DKAIEKMNG-----MLLN 164
+AI ++G ++LN
Sbjct: 800 SRAIAGVSGFGYDHLILN 853
>02502
Length = 1557
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Frame = -3
Query: 80 KPIRIMWSQRDP-------SLRKSGVGNVFIKN-----------LDKSIDNKALYDTFSA 121
+PIR W+ R P S+R+ VF ++ ++ + + +++TF
Sbjct: 1552 RPIRTNWATRKPLAPIAKDSVRQLSYDEVFNQSSQTNCTVYCGGVNNGLTEELMHNTFKD 1373
Query: 122 FGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKE 178
FG+IL ++ D KG+AF+ F ++AA AI ++G ++ND+ V K E
Sbjct: 1372 FGSILEVRIFKD----KGFAFIRFNNKDAATNAICTIHGTVINDQVVRCSWGKESNE 1214
>02140
Length = 1796
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKG--YAFVHFETQEAADKAIEKM 158
+F+ L+ ++ L FS FG I SC+V+ D + YAFV FE E + A KM
Sbjct: 807 LFVCKLNPVTTDEDLEMIFSRFGPITSCEVIRDHKTKESLQYAFVEFEKPEHCENAYFKM 986
Query: 159 NGMLLNDRKVFV 170
+ +L++DR++ V
Sbjct: 987 DNVLIDDRRIHV 1022
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%)
Frame = +3
Query: 4 AASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
A + P L+V L+ T+ L FS GP+ S V RD T+ SL YA+V F++P
Sbjct: 780 ADTKPPDNVLFVCKLNPVTTDEDLEMIFSRFGPITSCEVIRDHKTKESLQYAFVEFEKPE 959
Query: 64 DAERALDTMNFDVMKGKPIRIMWSQ 88
E A M+ ++ + I + +SQ
Sbjct: 960 HCENAYFKMDNVLIDDRRIHVDFSQ 1034
>28455
Length = 573
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = -1
Query: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMN 159
+F+KNL + +AL F G + ++V +G SKG A+V FET+E A +A+ K +
Sbjct: 534 LFVKNLPFTCSAEALETIFKEHGKVKDVRLVTYRSGASKGLAYVEFETEEMATQAVMKTD 355
Query: 160 GMLLNDRKVFVG 171
G+ + D + V
Sbjct: 354 GLQVGDHMISVA 319
>19868
Length = 434
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Frame = +2
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
++VG L + L + F+ G + + V +D TRRS G+ ++ F PA ++ L
Sbjct: 5 MFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQA 184
Query: 73 NFDVMKGKPI--RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
+ + GK I ++ + +R + +F+ L + + + F FG I +
Sbjct: 185 THE-LDGKKIDPKVAFPRRAHPRMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAML 361
Query: 131 VCDE--NGSKGYAFV 143
+ D+ N +G+ FV
Sbjct: 362 MFDKQTNRHRGFGFV 406
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Frame = +2
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATK----A 349
+++ L E LR F+ FG IT VM + RS+GFGF+ F P K A
Sbjct: 5 MFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQA 184
Query: 350 VTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRA 391
E++G+ + K VA +R R T + V G+ A
Sbjct: 185 THELDGKKIDPK---VAFPRRAHPRMVTRTKKIF--VGGLSA 295
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 7/143 (4%)
Frame = +2
Query: 206 NLKELFSQFGKTLSVKVMRD-XXXXXXXXXXVSYEKHEDANK----AVEEMNGKEMSGKA 260
+L++ F++FG+ V VM+D +++ +K A E++GK++ K
Sbjct: 44 SLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQATHELDGKKIDPKV 223
Query: 261 IFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSI 320
F RA ++ ++R + +++ L E ++ F FG I
Sbjct: 224 AFPRRAHPRM-----------------VTRTK--KIFVGGLSAPTTLEDVKNYFEQFGPI 346
Query: 321 TSAKVMLED--GRSKGFGFVCFS 341
A +M + R +GFGFV S
Sbjct: 347 EDAMLMFDKQTNRHRGFGFVTIS 415
>15371
Length = 383
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = -2
Query: 293 GVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSP 343
G NL+I +L D+ L + F PFG++ SAKV ++ SK FGFV + SP
Sbjct: 160 GANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSP 2
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -2
Query: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFET 147
N+FI +L + ++ L F FGN++S KV D+ N SK + FV +++
Sbjct: 154 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDS 5
>03000
Length = 778
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Frame = +3
Query: 182 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXXX-VSYEK 240
+L A++F ++I E D+ +L+ F +G+ + VMRD ++Y+
Sbjct: 60 DLDPNAEQFRKLFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKD 239
Query: 241 HEDANKAV----EEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNL 296
E ++A +++G+E+ K + E Q +K+ F GV
Sbjct: 240 AESIDQAQANRPHKIDGREVDTKRAMPREESGRSEVQQSVKKMF----------VGGVK- 386
Query: 297 YIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAV---- 350
+DT +D +R F+ FG IT ++ + G +++GF FV F + KAV
Sbjct: 387 -----EDTTED-MIRDTFNEFGEITGVDLIQDKGTGKNRGFCFVTFGDHDSVDKAVLKKR 548
Query: 351 TEMNGRIV 358
++NGR V
Sbjct: 549 HDLNGRQV 572
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +3
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVT-- 351
L+I L D++ LR F +G I VM + RS+GFGF+ + E +A
Sbjct: 93 LFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQAQANR 272
Query: 352 --EMNGRIVGSK 361
+++GR V +K
Sbjct: 273 PHKIDGREVDTK 308
>02064
Length = 1195
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = +1
Query: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSP 343
+ +R++R + +KNL I + LR F G + +++ ++ GRS G G V F++
Sbjct: 49 RGQRVTRPDNCTVQVKNLPYAITWQDLRERFQEIGVVKYSEITMDKGRSTGQGLVRFATE 228
Query: 344 EEATKAVTEMN-----GRIVGSKPLYVALAQR 370
++A +A+ M+ GR +G K +Y QR
Sbjct: 229 DDAVRAINSMDRTRYEGRTIGVK-MYRG*WQR 321
>00029
Length = 2204
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = -3
Query: 294 VNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 353
+ ++I NL D D E+LR F +GS+ V+ K FGFV EA A++ +
Sbjct: 2136 IKIFIGNLGDDTDPEELRALFEKYGSVAECDVL------KNFGFVHMVKKGEADDAISNL 1975
Query: 354 NGRIVGSKPLYVALA 368
NG +G + + V L+
Sbjct: 1974 NGYNIGGQRMRVELS 1930
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = -3
Query: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
+FI NL D + L F +G++ C V+ K + FVH + AD AI +NG
Sbjct: 2130 IFIGNLGDDTDPEELRALFEKYGSVAECDVL------KNFGFVHMVKKGEADDAISNLNG 1969
Query: 161 MLLNDRKVFV 170
+ +++ V
Sbjct: 1968 YNIGGQRMRV 1939
>00302
Length = 927
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = -1
Query: 113 KALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV 170
+ L + F +G+I +VV D S+G+AFV+F++ E A +A ++ NG+ ++ RK+ V
Sbjct: 423 RGLREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAKDRCNGIEIDGRKIRV 244
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -1
Query: 293 GVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAV 350
G++LY + + LR F +G I+ +V+ + GRS+GF FV F S E+A +A
Sbjct: 447 GLSLYTQ-------ERGLREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAK 289
Query: 351 TEMNGRIVGSKPLYVALA 368
NG + + + V +
Sbjct: 288 DRCNGIEIDGRKIRVDFS 235
>03903
Length = 983
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = -1
Query: 296 LYIKNLDDTIDDEKLRREFSPF--------GSITSAKVMLEDGRSKGFGFVCFSSPEEAT 347
LYIKNL + +E L F + SI ++M E GR KG FV + E+A
Sbjct: 452 LYIKNLSKQVTEEDLHWVFGRYVNWDKEEEKSIFDIRLMKE-GRMKGQAFVTLGTEEQAR 276
Query: 348 KAVTEMNGRIVGSKPLYVALAQ 369
KAV + N + KP+ V A+
Sbjct: 275 KAVKDTNAFVFKGKPIAVHFAR 210
>28605
Length = 697
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -3
Query: 101 VFIKNLDKSIDNKA-LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
VF+ NL ++A L + FS +GN+L V + Y FV F T+E +A+E MN
Sbjct: 563 VFVANLSSDETSEAELQELFSKYGNVLDTLVHHNR-----YGFVQFSTEEEGRRAVEAMN 399
Query: 160 GMLLNDRKV 168
G + +K+
Sbjct: 398 GYMFYRKKL 372
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 296 LYIKNLD-DTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
+++ NL D + +L+ FS +G++ V +GFV FS+ EE +AV MN
Sbjct: 563 VFVANLSSDETSEAELQELFSKYGNVLDTLV-----HHNRYGFVQFSTEEEGRRAVEAMN 399
Query: 355 GRIVGSKPL 363
G + K L
Sbjct: 398 GYMFYRKKL 372
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -3
Query: 185 AKAKEFTN--VYIKNFG-EEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXXXVSYEKH 241
+K +F N V++ N +E + L+ELFS++G L V + V +
Sbjct: 593 SKEPKFLNSRVFVANLSSDETSEAELQELFSKYGNVLDTLVHHNRYGF------VQFSTE 432
Query: 242 EDANKAVEEMNG 253
E+ +AVE MNG
Sbjct: 431 EEGRRAVEAMNG 396
>09736
Length = 1319
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -2
Query: 317 FGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRI-VGSKPLYVALAQRKEER 374
+ S+ AKV+L+ G+SKGFGFV FS + +A+ EM +G +P+ V LA K
Sbjct: 1318 YRSVRGAKVVLDASGKSKGFGFVRFSEENDQQRALVEMQHMTGIGRRPIKVGLAAPKRGH 1139
Query: 375 KAH 377
H
Sbjct: 1138 GFH 1130
>03200
Length = 657
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Frame = -1
Query: 292 QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
+G +Y+ + + ++ L+ FS FG+I + + R + GFV F E A +A+
Sbjct: 492 KGHTVYVHGIG--VTEDILKSAFSNFGNIVNINI----ERERNNGFVTFEKMESADQAIA 331
Query: 352 EMNGRIVGSKPLYVALAQRK 371
MNG ++ + L V +A+R+
Sbjct: 330 NMNGSMISNVQLKVMMARRQ 271
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = -1
Query: 193 VYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXXXVSYEKHEDANKAVEEMN 252
VY+ G V + LK FS FG +++ + R+ V++EK E A++A+ MN
Sbjct: 480 VYVHGIG--VTEDILKSAFSNFGNIVNINIERERNNGF-----VTFEKMESADQAIANMN 322
Query: 253 GKEMSGKAIFVGRAQKK 269
G +S + V A+++
Sbjct: 321 GSMISNVQLKVMMARRQ 271
>02091
Length = 2031
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = -2
Query: 564 VQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLH-ML 622
QGQ A+ +A A PQ Q QM+GE+LF L+ S+ T +L+ DNSELL ML
Sbjct: 1406 CQGQN--EAATVAEAHPQVQTQMIGEQLFSLM----SDXYPYPTDXMLKFDNSELLRIML 1245
Query: 623 ESPESLRSKVDEAVAVL 639
E +S+ + D A+ +L
Sbjct: 1244 ECQQSVNYR-DAAMVML 1197
>00556
Length = 2189
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Frame = +3
Query: 13 LYVGDLHSDVTEAMLYEKF-----------SPAGPVLSIRVCRDMI-----------TRR 50
LYVG++ VTE + + F + PV+++ + D T +
Sbjct: 435 LYVGNIPFGVTEESMMDFFNHQMKITGLAQAEGDPVIAVHINLDKNFAFLELRSVDETTQ 614
Query: 51 SLGYAYVNFQ-QPADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGN----VFIKN 105
+L + + ++ QP R D + P +Q P + + V + +F+
Sbjct: 615 ALAFDGIAYETQPLKIRRPSDYKPLPGLSENP-----TQAVPGVVSTVVQDSDHKIFMGG 779
Query: 106 LDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLL 163
L + + + +FG + S +V D SKG+AF + D+A +NGM L
Sbjct: 780 LPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTDQACAGLNGMQL 959
Query: 164 NDRKVFVGRFKSRKEREAELGAK 186
D+K+ V R A +GAK
Sbjct: 960 GDKKLIVQR--------ASIGAK 1004
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM 353
+++ L + +++++ FG + S ++ ++ G SKGF F + P +A +
Sbjct: 765 IFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTDQACAGL 944
Query: 354 NGRIVGSKPLYV 365
NG +G K L V
Sbjct: 945 NGMQLGDKKLIV 980
>20169
Length = 1364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = -1
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
+YVG+L + L +KF+ GP+ ++ + RR G+A+V F+ DAE A+ +
Sbjct: 1064 VYVGELGHGCAKQELEDKFAKYGPLKNV-----WVARRPAGFAFVEFEDNRDAEDAVQAL 900
Query: 73 NFDVMKGKPIRIMWSQ 88
+ + G+ R+ S
Sbjct: 899 DGARINGRRARVEMSN 852
>12506
Length = 1056
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = -3
Query: 305 IDDEKLRREFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 362
+DD+ L F PFG I ++ L E + +GF F+ F E+A A+ MN + +
Sbjct: 1030 VDDKVLHAAFLPFGDIVDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNMNESELFGRT 851
Query: 363 LYVALA-----QRKEERKAHLTNQYMQRVAG 388
+ V LA + R + ++Q+ AG
Sbjct: 850 IRVNLAKPMKVKEGASRAVWADDTWLQQHAG 758
>33516
Length = 449
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVML--EDGRSKGFGFVCFSSP 343
+++ L D + L+ FS FG IT VM+ + G+S+GFGFV F P
Sbjct: 160 IFVGGLSWDTDQDSLQGYFSQFGEITDCIVMMNQQTGKSRGFGFVSFKDP 309
>02809
Length = 1475
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = -1
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
+YVG+L + L +KF+ GP+ ++ + RR G+A+V F+ DAE A+ +
Sbjct: 1328 VYVGELGHGCAKQELEDKFAKYGPLKNV-----WVARRPAGFAFVEFEDNRDAEDAVQAL 1164
Query: 73 N 73
+
Sbjct: 1163 D 1161
>03059
Length = 1154
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -2
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMI-TRRSLGYAYVNFQQPADAERALDT 71
++VG L +V + + E FS G + I + D I S G+AYV ++ P DAE+A+
Sbjct: 664 VHVGRLTRNVNKDHIQEIFSLYGTIKFIDLPNDRIHPNTSKGHAYVEYENPEDAEKAVKY 485
Query: 72 MNFDVMKGKPI 82
M+ + G+ I
Sbjct: 484 MDGGQIDGQEI 452
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 191 TNVYIKNFGEEVDDGNLKELFSQFG--KTLSVKVMRDXXXXXXXXXXVSYEKHEDANKAV 248
T V++ V+ +++E+FS +G K + + R V YE EDA KAV
Sbjct: 670 TKVHVGRLTRNVNKDHIQEIFSLYGTIKFIDLPNDRIHPNTSKGHAYVEYENPEDAEKAV 491
Query: 249 EEMNGKEMSGKAI 261
+ M+G ++ G+ I
Sbjct: 490 KYMDGGQIDGQEI 452
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -2
Query: 294 VNLYIKNLDDTIDDEKLRREFSPFGSITSAKV---MLEDGRSKGFGFVCFSSPEEATKAV 350
+++ L ++ + ++ FS +G+I + + SKG +V + +PE+A KAV
Sbjct: 670 TKVHVGRLTRNVNKDHIQEIFSLYGTIKFIDLPNDRIHPNTSKGHAYVEYENPEDAEKAV 491
Query: 351 TEMNG 355
M+G
Sbjct: 490 KYMDG 476
>10194
Length = 1278
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = -3
Query: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
S++VG+L D+ E + F G V +IRV RD T G Y+ F+ AL
Sbjct: 403 SVFVGNLPFDIEEESVRSHFEDCGDVENIRVVRDRKTNLGKGICYILFKSADSVSLALKL 224
Query: 72 MNFDVMKGKPIRIMWSQ 88
N ++ K + IR+ +
Sbjct: 223 NNSELEK-RQIRVQRCK 176
>32386
Length = 674
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +1
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVT-- 351
L+I L D++ LR F +G I VM + RS+GFGF+ + E +A
Sbjct: 307 LFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQAQANR 486
Query: 352 --EMNGRIVGSK 361
+++GR V +K
Sbjct: 487 PHKIDGREVDTK 522
>03406
Length = 1292
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +3
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSA--KVMLEDGRSKGFGFVCFSSPEEATKAVT-- 351
+++ L + LR F FG +TS K L+ G+S+GFGFV F V
Sbjct: 246 IFVGGLSWETXSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKEAATVDAVVKNK 425
Query: 352 --EMNGRIVGSKP 362
++ GR + KP
Sbjct: 426 EHKLQGRKIDPKP 464
>26197
Length = 1365
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = -2
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSA--KVMLEDGRSKGFGFVCFSSPEEATKAVT-- 351
+++ L + LR F FG +TS K L+ G+S+GFGFV F V
Sbjct: 1292 IFVGGLSWETSSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKEAVTVDAVVKNK 1113
Query: 352 --EMNGRIVGSKP 362
++ GR + KP
Sbjct: 1112 EHKLQGRKIDPKP 1074
>31618
Length = 716
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Frame = +1
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNF-------QQPADA 65
L+VG L + TE L + F G + SI V D T RS G+A++ F Q A
Sbjct: 298 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSAAE 477
Query: 66 ERALDTMNFDVMKGKP-------IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDT 118
E +++ D K KP + + QR ++RKS +V NLD
Sbjct: 478 EHIINSKKVDP-KKKPRLAMARFLSVA*PQR-LAMRKSKPTSV---NLD----------- 609
Query: 119 FSAFGNILSCKVVCDENGS--KGYAFVHFETQEAA 151
NI+ ++ D+ S KG+ F+ F++++
Sbjct: 610 -----NIVEVEMPFDKQKSHRKGFXFITFDSEQVV 699
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
L++ L +++LR F +G I S V + GRS+GF F+ F++ EA V+
Sbjct: 298 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTN-TEAIDQVSAA 474
Query: 354 NGRIVGSK 361
I+ SK
Sbjct: 475 EEHIINSK 498
>02347
Length = 928
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = -3
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
+YVGDL D +E + F+ G + ++ + R G+A+V F+ DA+ A+ +
Sbjct: 740 IYVGDLPPDASEKEVERAFNYYGHLRNV-----WVARNPPGFAFVEFEDTRDADDAVRAL 576
Query: 73 NFDVMKGKPIRIMWS 87
+ V+ G +R+ S
Sbjct: 575 DGTVVCGNRVRVEHS 531
>05987
Length = 1726
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Frame = -2
Query: 100 NVFIKNLDKSI---DNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIE 156
+F+KNL ++ D K+L ++ + + G+A+V F ++ ADK +
Sbjct: 1167 TLFVKNLPPTVSVTDIKSLSKDIKEVRLRIAVRAKQRQKKKMGFAYVEFASEALADKNYK 988
Query: 157 KMNGMLLNDRKV---FVGRFKSRKEREAELGAKA-KEFTN-----VYIKNFGEEVDDGNL 207
++ G L D + +VG ++ A L K KEF + +YI FG E + +L
Sbjct: 987 QLQGTKLKDWDLVVDYVG------QKSAYLANKPRKEFADPDPLRLYITGFGSETKEADL 826
Query: 208 KELFSQFGKTLSVKVMRDXXXXXXXXXXVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQ 267
+LF + + + K +D + E A + G ++ G + V A+
Sbjct: 825 FKLFPKAQEIVIPKRKKDNKPVGYAFAV--FVTDEQCKTAFHKNQGAKLQGHNLVVLYAK 652
Query: 268 KKVERQAELKRKFEQLKQ 285
K+ ++ + ++ EQ Q
Sbjct: 651 KRTAQKQQKAKESEQKTQ 598
>01065
Length = 1033
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
+ + +L S + + + F FG+I+ + AFV + +E A+KAI +M+G
Sbjct: 20 IHVGSLSSSTSTREIREEFKRFGDIIDLWM---PRTQPTIAFVVYRYEEDAEKAIRRMDG 190
Query: 161 MLLNDRKVFV 170
++ R+V V
Sbjct: 191 ESMHGRRVRV 220
>00738
Length = 1559
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = -2
Query: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
+ + +L S + + + F FG+I+ + AFV + +E A+KAI +M+G
Sbjct: 1261 IHVGSLSSSTSTREIREEFKRFGDIIDLWM---PRTQPTIAFVVYRYEEDAEKAIRRMDG 1091
Query: 161 MLLNDRKVFV 170
++ R+V V
Sbjct: 1090 ESMHGRRVRV 1061
>32733
Length = 709
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 119 FSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMN 159
F +FG+I C V+ D NG S+G AF+ F +++ A +I+ M+
Sbjct: 526 FESFGSIDDCTVLRDSNGTSRGCAFITFASRQCAMNSIKGMH 651
>15503
Length = 570
Score = 35.0 bits (79), Expect = 0.094, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +1
Query: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
+++KNL I + +YD F +G I + V + +KG AFV +E A A + ++G
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIR-VGNTPETKGTAFVVYEDIFDAKNACDHLSG 330
Query: 161 MLLNDRKVFVGRFKSRK 177
+ +R + V ++S +
Sbjct: 331 FNVCNRYLVVLYYQSTR 381
Score = 30.8 bits (68), Expect = 1.9, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 44/96 (45%)
Frame = +1
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
LY+KNL I E++ F +G+I +V +KG FV + +A A ++G
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIRVG-NTPETKGTAFVVYEDIFDAKNACDHLSG 330
Query: 356 RIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRA 391
V ++ L V Q K T++ + + M++
Sbjct: 331 FNVCNRYLVVLYYQSTRAFKKLDTDKKKEELDKMKS 438
Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 41/83 (49%)
Frame = +1
Query: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
LYV +L +T +Y+ F G + IRV T + G A+V ++ DA+ A D +
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIRVGN---TPETKGTAFVVYEDIFDAKNACDHL 324
Query: 73 NFDVMKGKPIRIMWSQRDPSLRK 95
+ + + + +++ Q + +K
Sbjct: 325 SGFNVCNRYLVVLYYQSTRAFKK 393
>08670
Length = 1307
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Frame = +2
Query: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
+ +L+VG++ VTE L + F+ GPV S+R+ + A++N++ A RA+
Sbjct: 950 LTALWVGNVLPQVTEKRLTQMFAKHGPVASVRMLPEKYC------AFINYKLKESAGRAM 1111
Query: 70 DTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
+ +G+ + I R P + GN+ ++
Sbjct: 1112 QYLQNQECEGQHLLI----RFPDNPINPTGNITLR 1204
>00781
Length = 3170
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -1
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKV-MLEDGRS-KGFGFVCFSSPEEATKAVTEM 353
+Y++ E + R FS G++T + + R KG+ FV F SPEEA KAV +
Sbjct: 2714 VYVEGFHKFTSREWISRMFSKCGTVTYVSLPCFKTTREIKGYAFVEFQSPEEAVKAVQML 2535
Query: 354 N 354
N
Sbjct: 2534 N 2532
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -1
Query: 81 PIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--K 138
PIR + +Q + R V+++ K + + FS G + + C + K
Sbjct: 2756 PIRFL-TQEETDAR-----TVYVEGFHKFTSREWISRMFSKCGTVTYVSLPCFKTTREIK 2595
Query: 139 GYAFVHFETQEAADKAIEKMN 159
GYAFV F++ E A KA++ +N
Sbjct: 2594 GYAFVEFQSPEEAVKAVQMLN 2532
>23322
Length = 471
Score = 33.9 bits (76), Expect = 0.20, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Frame = -2
Query: 277 KRKFEQLKQERISRYQGVN-LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDG--RSK 333
KR + + R Q V +++ + + ++ +R F+ FG IT ++ + G +++
Sbjct: 464 KRAMPREESGRSEVQQSVKKMFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNR 285
Query: 334 GFGFVCFSSPEEATKAVT----EMNGRIVGSK 361
GF FV F + KAV ++NGR V K
Sbjct: 284 GFCFVTFGDHDSVDKAVLKKRHDLNGRQVEVK 189
>25950
Length = 417
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYAFVHFETQEAADKAIEK 157
+V++ N+D + L F G I ++C+ + KG+A++ F ++E + A+
Sbjct: 278 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETAL-A 102
Query: 158 MNGMLLNDRKVFV 170
MN L R++ V
Sbjct: 101 MNETLFRGRQIKV 63
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = -2
Query: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
S+YVG++ + L F G + + + + G+AY+ F E AL
Sbjct: 278 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETAL-A 102
Query: 72 MNFDVMKGKPIRIM 85
MN + +G+ I++M
Sbjct: 101 MNETLFRGRQIKVM 60
>29364
Length = 1126
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 202 VDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXXXVSYEKHEDANKAVEEMNGKEMSGKAI 261
V + +L+ F +G+T + + V +E + DA+ AV E+NGKE+ G+ +
Sbjct: 1 VRERDLERFFKGYGRTRDILI-------KNGYGFVEFEDYRDADDAVYELNGKELLGERV 159
Query: 262 FV 263
V
Sbjct: 160 VV 165
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 139 GYAFVHFETQEAADKAIEKMNGMLLNDRKVFV 170
GY FV FE AD A+ ++NG L +V V
Sbjct: 70 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 165
>04988
Length = 705
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = -3
Query: 288 ISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEAT 347
+S G +YI L ++ + R F +G + +ML++G +GFV F +A
Sbjct: 670 LSNRMGTRVYIGRLPYQAREKDIERFFRGYGRVND--IMLKNG----YGFVEFEDFRDAD 509
Query: 348 KAVTEMNGRIVGSKPLYVALAQ 369
AV E+NG+ + + + + A+
Sbjct: 508 DAVYELNGKDLCGERVIIEHAR 443
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = -3
Query: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXXXVSYEKHEDANKAVEE 250
T VYI + + +++ F +G+ + + V +E DA+ AV E
Sbjct: 652 TRVYIGRLPYQAREKDIERFFRGYGRVNDIML-------KNGYGFVEFEDFRDADDAVYE 494
Query: 251 MNGKEMSGKAIFVGRAQ 267
+NGK++ G+ + + A+
Sbjct: 493 LNGKDLCGERVIIEHAR 443
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 139 GYAFVHFETQEAADKAIEKMNGMLLNDRKVFV 170
GY FV FE AD A+ ++NG L +V +
Sbjct: 550 GYGFVEFEDFRDADDAVYELNGKDLCGERVII 455
>11019
Length = 552
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 308 EKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSP 343
E LR F FG I + VM + RS+GFGFV + P
Sbjct: 522 ETLRSYFEKFGEIKESMVMKDPTSKRSRGFGFVTYKDP 409
>12350
Length = 975
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = -2
Query: 289 SRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEA 346
SR + +L + L ++ LR FS FG + +V + G+SKGFGF+ F+ E
Sbjct: 635 SRQKCSDLIVLGLPWKSTEDDLRSYFSQFGDLLMVQVKKDPKTGQSKGFGFIRFAEYESQ 456
Query: 347 TKAVTE---MNGR 356
K + + ++GR
Sbjct: 455 LKCMAQRHMIDGR 417
>23720
Length = 739
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = -1
Query: 288 ISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEAT 347
+S G +YI L ++ + R F +G + +ML++G +GFV F +A
Sbjct: 703 LSNRMGTRVYIGRLPYQAREKDIERFFRGYGRVND--IMLKNG----YGFVEFEDFRDAD 542
Query: 348 KAVTEMNGRIVGSKPLYVALAQ 369
AV E+NG+ + + + + A+
Sbjct: 541 DAVYELNGKDLCGERVIIEHAR 476
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = -1
Query: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXXXVSYEKHEDANKAVEE 250
T VYI + + +++ F +G+ + + V +E DA+ AV E
Sbjct: 685 TRVYIGRLPYQAREKDIERFFRGYGRVNDIML-------KNGYGFVEFEDFRDADDAVYE 527
Query: 251 MNGKEMSGKAIFVGRAQ 267
+NGK++ G+ + + A+
Sbjct: 526 LNGKDLCGERVIIEHAR 476
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 139 GYAFVHFETQEAADKAIEKMNGMLLNDRKVFV 170
GY FV FE AD A+ ++NG L +V +
Sbjct: 583 GYGFVEFEDFRDADDAVYELNGKDLCGERVII 488
>11126
Length = 1061
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 13/122 (10%)
Frame = -3
Query: 241 HEDANKAVEEMNG-----KEMSGKAIFVGRAQKKVERQAELKRKFEQL------KQERIS 289
HED+N E+ +EM +A + Q +VE+Q L QE
Sbjct: 822 HEDSNVEDPELEAIKARVREMEAEAEKLKEMQSEVEKQMNLSSPTSAATASPFPSQEDKI 643
Query: 290 RYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEAT 347
++Y+ N+D E+L + F GS+ ++ + G KGF +V F+ +
Sbjct: 642 EADLRSVYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKYSGHPKGFAYVEFADKDSVV 463
Query: 348 KA 349
A
Sbjct: 462 TA 457
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Frame = -3
Query: 3 AAASSYP---------MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLG 53
A AS +P + S+YVG++ T L + F G V + + D + G
Sbjct: 681 ATASPFPSQEDKIEADLRSVYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKYSGHPKG 502
Query: 54 YAYVNFQQPADAERALDTMNFDVMKGKPIRI 84
+AYV F A T + +G+ I++
Sbjct: 501 FAYVEFADKDSVVTAKCTGMDSLFRGRQIKV 409
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -3
Query: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQEAADKAIEK 157
+V++ N+D + L F G++ ++CD+ KG+A+V F +++ A K
Sbjct: 627 SVYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKYSGHPKGFAYVEFADKDSVVTA--K 454
Query: 158 MNGM--LLNDRKVFV 170
GM L R++ V
Sbjct: 453 CTGMDSLFRGRQIKV 409
>31265
Length = 540
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Frame = +2
Query: 53 GYAYVNF---QQPADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFI---KNL 106
G+A+V + + A A R L + G I + W++ + + + + V I +NL
Sbjct: 5 GFAFVEYTSHRAAAMARRKLIPGRIQLW-GHQIAVDWAEPEQDVDEDTMSQVKILXVRNL 181
Query: 107 DKSIDNKALYDTFS-AFG--NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLL 163
+ + L D FS A G I K + D YAFVHF ++E A KA++ +G +
Sbjct: 182 MLTTTEETLKDVFSRAAGGREIERVKKIRD------YAFVHFRSREDAIKAMDVTDGSTI 343
Query: 164 NDRKVFV 170
+V V
Sbjct: 344 EGSQVEV 364
>03097
Length = 1401
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Frame = +1
Query: 131 VCDENGSK--GYAFVHFETQEAADKAIEKMNGMLLNDRKVF-----VGRFKSRKEREAEL 183
+CD G G +V F +E ADKA+ +N N R ++ V F+ R+ E+
Sbjct: 211 ICDNLGDHLVGNVYVKFRKEEDADKAVADLNNRWFNGRPIYAELTPVTDFREACCRQYEM 390
Query: 184 G 184
G
Sbjct: 391 G 393
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 195 IKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXXXXXXXVSYEKHEDANKAVEEMNGK 254
+F EE+ EL ++G+ + + + V + K EDA+KAV ++N +
Sbjct: 142 FDDFFEEI----FIELAEKYGEIEEMNICDNLGDHLVGNVYVKFRKEEDADKAVADLNNR 309
Query: 255 EMSGKAIF 262
+G+ I+
Sbjct: 310 WFNGRPIY 333
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 337 FVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
+V F E+A KAV ++N R +P+Y L + R+A
Sbjct: 250 YVKFRKEEDADKAVADLNNRWFNGRPIYAELTPVTDFREA 369
>39789
Length = 361
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +1
Query: 296 LYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDG-RSKGFGFVCFSSPEEATKAVT--- 351
L++ NL D L+ F G+ + +D + +GFGFV FS+P++A A
Sbjct: 94 LFVGNLSYDTDQYSLKDAFP--GATAARIAKFQDTQKPRGFGFVEFSTPDDAASAFDSGE 267
Query: 352 -EMNGRIV 358
E++GR V
Sbjct: 268 REVDGRQV 291
>19980
Length = 450
Score = 31.6 bits (70), Expect = 0.98, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 304 TIDDEKLRREFSPFGSITSAKVM-LEDGRSKGFGFVCFSSPEEATKA 349
T +++ LR FS G+IT + DG+ + F FV FS EEA A
Sbjct: 155 TTNEKMLRDLFSKKGTITDCSLKHTADGKFRRFAFVGFSCEEEAKTA 15
>11579
Length = 1307
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 51 SLGYAYVNFQQPADAERALDTMNFDVMKGKPIRIMWSQ 88
S G+A+V F DAE A+D+M+ ++ G+ +R ++
Sbjct: 3 SRGFAFVRFYDRRDAEDAMDSMDGALLDGREVRCQMAR 116
>25632
Length = 864
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 118 TFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
+G + C V+ K Y FVH T+ A AI +NG
Sbjct: 710 CLEKYGTVEECDVL------KNYGFVHMPTKSEASAAITNLNG 600
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = -2
Query: 317 FGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
+G++ V+ K +GFV + EA+ A+T +NG + + + V L+ K
Sbjct: 698 YGTVEECDVL------KNYGFVHMPTKSEASAAITNLNGYNIKGQRMRVELSTNK 552
>28372
Length = 398
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365
+GFGFV F+ EA +A +MNG +V + + V
Sbjct: 259 QGFGFVTFAHSAEAERARDKMNGTVVEGRKIEV 161
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKV 168
+G+ FV F A++A +KMNG ++ RK+
Sbjct: 259 QGFGFVTFAHSAEAERARDKMNGTVVEGRKI 167
>19733
Length = 723
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Frame = +3
Query: 36 PVLSIRVCRDMI------TRRSLGYAYVNFQQPADAERALDTMNFDVMKG---KPI 82
+ RV RD+ +SLGYA+VNF A +AL +N M G +PI
Sbjct: 480 KITECRVMRDLARTKQSGQSKSLGYAFVNFSTHEHALKALRGLNNSTMFGDSRRPI 647
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 103/259 (39%), Gaps = 27/259 (10%)
Frame = +3
Query: 123 GNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN------GMLLNDRKVF----V 170
G + ++V D+ S+G AFV F+ ++AAD+ + G+ + R ++ V
Sbjct: 3 GELAYVRLVIDKVTGQSRGTAFVQFKEKDAADQCLANXQDTTRGGGLRVQGRPLYVVAAV 182
Query: 171 GRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDXXXXX 230
R +++ ++EA+ + K+ N+++ G L +Q + +S
Sbjct: 183 SRTQAQTQKEADKSKEQKDNRNLFLAREG-------LIRAGTQAAEGMS----------- 308
Query: 231 XXXXXVSYEKHEDANK--AVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERI 288
ED NK VE + +++ IFV
Sbjct: 309 ----------QEDINKRMKVEMVKREKLKNINIFVS------------------------ 386
Query: 289 SRYQGVNLYIKNLDDTIDDEKLR---REFSPFGS--ITSAKVMLEDGRSK--------GF 335
L + NL ++D+++L+ R+ + IT +VM + R+K G+
Sbjct: 387 ----STRLCVHNLLPSVDEKQLKTVVRKIVDDSTMKITECRVMRDLARTKQSGQSKSLGY 554
Query: 336 GFVCFSSPEEATKAVTEMN 354
FV FS+ E A KA+ +N
Sbjct: 555 AFVNFSTHEHALKALRGLN 611
>29083
Length = 710
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2
Query: 119 FSAFGNILSCKVVCDENGSKG-YAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSR 176
F A + K + E KG Y V + ++ ADKA+ + NG+L++ + V R + R
Sbjct: 691 FQAVYPVRRTKGIFAETTIKGKYGVVKYLSEPDADKAVSESNGLLMDGVPLLVRRMERR 515
>00741
Length = 1846
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 337 FVCFSSPEEATKAVTEMNGRIVGSKPL 363
FV FS EE KAV+ +NGR G + L
Sbjct: 1430 FVEFSKQEELEKAVSSLNGRFFGGRVL 1350
>30934
Length = 809
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Frame = +1
Query: 35 GPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVMKGKPIRIM----WSQRD 90
GPV + + D IT++ G+A+V F P A +A ++ +G+ + I+ +Q+
Sbjct: 28 GPVTDLDLPVDPITKKIKGFAHVTFMFPEHAVKARMELDRQGFRGRMLHILPGKDRTQKY 207
Query: 91 PSLRKSG---VGNVFIKNLDKSIDN-KALYDTFSAFGNILSCKVVCDEN--------GSK 138
S KS + + K L KS N L+ + A ++ K D++ GS
Sbjct: 208 VSHEKSSYKKLKDEKTKALVKSSHNWNTLFLSGDAVATAMATKYXADKSDILDDSGKGSL 387
Query: 139 GYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNF 198
G ETQ + + L D V + F +A+ GA++K T + K+
Sbjct: 388 GVRMALGETQ------LVQETRQFLIDNGVALDSFS-----QAD-GARSK--TVIIAKDL 525
Query: 199 GEEVDDGNLKELFSQFGKTLSV 220
+ L E+FS++G V
Sbjct: 526 PAATESDXLTEVFSKYGTVARV 591
>35379
Length = 534
Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 314 FSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAV-TEMNGRIVGSKPLYVALAQRK 371
FS FG + AK E KG+GFV F + E+A + + E + I + L + A RK
Sbjct: 46 FSAFGPVKDAK**QTELECPKGYGFVTFENQEDADRIIKKEADNLIFKDRKLNIGPAVRK 225
Query: 372 E 372
+
Sbjct: 226 Q 228
>12096
Length = 1585
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIV 358
G S+GFGFV F S EA + + G++V
Sbjct: 1109 GASRGFGFVEFQSQSEAQRWMDHNQGQVV 1023
>33791
Length = 247
Score = 29.3 bits (64), Expect = 4.7, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Frame = +3
Query: 308 EKLRREFSPFGSITSA--------KVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 358
+ RR PF +T+ +V + ++GFGFV SS ++ + E GRI+
Sbjct: 63 DPFRRRLHPFPDVTATSQGTAYPYEVTVTRRETEGFGFVIISSVTKSGSTLGEFIGRII 239
>23250
Length = 1617
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVV--CDENGSKGYAFVHFETQ 148
RKS G V++ ++ + FS FG + ++ GSKGYAF+ F T+
Sbjct: 1350 RKSDRGVVYLGHIPAGFYEPQMKRFFSQFGRVTRLRLSRSTKTGGSKGYAFLEF*TR 1180
>01937
Length = 1320
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = -1
Query: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
+ ++VG L S T F G + + D +T R G+A+V F D E +D
Sbjct: 1215 SKIFVGGLSSSTTVEDXKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTF----DNESTVD 1048
Query: 71 TMNFDVMKGKPIRIMWSQRDPSLRK 95
+ + + ++ W R S +K
Sbjct: 1047 KVCENPLP*NQLKKWWRPRKLSPKK 973
>19556
Length = 917
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = -1
Query: 14 YVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA-ERALDTM 72
++G L VTE L EKFS G V ++ + S +AYVN + ++
Sbjct: 821 FIGGLVKGVTEEELMEKFSRFGQVSNVDIKTRTNGIDSRTFAYVNLTAEENGFKKCFTAY 642
Query: 73 NFDVMKGKPIRIMWSQRD--PSLRKSGVGNVFIKNLDKS 109
N KG +++ +++ L+K +K+ +KS
Sbjct: 641 NNTKWKGGQLKLQYAKESSLSKLKKEQTEARLVKDKEKS 525
>12593
Length = 462
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 134 ENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKV 168
+ GSKG+A+V FE ++ +A+ NG L D+ +
Sbjct: 113 QTGSKGFAYVEFEDPDSLQEAL-TYNGALFEDKNL 214
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|45476573|ref|NP_032414.1| eukaryotic translation
initiation factor 3, subunit 6 [Mus musculus]
(445 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03597 572 e-163
07841 279 2e-75
01018 124 5e-29
>03597
Length = 1439
Score = 572 bits (1474), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/361 (75%), Positives = 313/361 (86%)
Frame = -3
Query: 73 KRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLY 132
KR V +LK LQAET+ I K+FE+ E RQ+QS+RDGR LFD+L ++GF+Q+ LDTLY
Sbjct: 1374 KREEWVGKLKSLQAETDIITKIFEETEVQRQIQSSRDGRQLFDFLYKEYGFKQQMLDTLY 1195
Query: 133 RYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQNWDAAMEDLTRL 192
+YAKFQYECGNYSG AEYLYF RVL+P +D N +++ WGKLASEILMQ+WD A+EDL ++
Sbjct: 1194 KYAKFQYECGNYSGTAEYLYFVRVLLPPSDPNYMNACWGKLASEILMQSWDVALEDLKKV 1015
Query: 193 KETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPH 252
+E ID N + L LQQRTWLIHWSLFVFFNH KGRD IID FLYQP YLNAIQTMCPH
Sbjct: 1014 QEIIDANQFPNALIGLQQRTWLIHWSLFVFFNHAKGRDLIIDQFLYQPLYLNAIQTMCPH 835
Query: 253 ILRYLTTAVITNKDVRKRRQVLKDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKL 312
ILRYLTTAVITNK +R++VLKDLVKVIQQESYTYKDPITEFV CLYV FDF+GAQ+KL
Sbjct: 834 ILRYLTTAVITNKG--RRQKVLKDLVKVIQQESYTYKDPITEFVMCLYVKFDFNGAQQKL 661
Query: 313 RECESVLVNDFFLVACLEDFIENARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIV 372
RECE VL+NDFFLVACLEDFIENARL IFETFCRIH+CISI MLA+KLNMTP++AERWIV
Sbjct: 660 RECEVVLMNDFFLVACLEDFIENARLLIFETFCRIHECISITMLAEKLNMTPDDAERWIV 481
Query: 373 NLIRNARLDAKIDSKLGHVVMGNNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRS 432
NLIRNARLDAKIDSKLGHVVMG AVSPYQQVIEKTK+L+FRSQ+LA+ IEKK + +++
Sbjct: 480 NLIRNARLDAKIDSKLGHVVMGTQAVSPYQQVIEKTKNLAFRSQVLALTIEKKTSGHNKQ 301
Query: 433 E 433
+
Sbjct: 300 D 298
>07841
Length = 643
Score = 279 bits (713), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/206 (64%), Positives = 167/206 (81%), Gaps = 1/206 (0%)
Frame = -1
Query: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKN 60
M +YDLT + +LDRHLVFPLLEFLSVKE+Y+E ++L+GKL+LLS+TNMVDFAMDV+KN
Sbjct: 622 MEKYDLTPILCQYLDRHLVFPLLEFLSVKELYDENDMLKGKLNLLSNTNMVDFAMDVHKN 443
Query: 61 LYSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD 119
LY D P LREKR VV +LK LQAET+ I K+FE+ E RQ+QS+RDGR LFD+L
Sbjct: 442 LYPDQRDPANLREKRQEVVGKLKSLQAETDIITKIFEETEVQRQIQSSRDGRQLFDFLYK 263
Query: 120 KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILM 179
++GF+Q+ LDTLY+YAKFQYECGNYSG AEYLYF RVL+P +D N +++ WGKLASEILM
Sbjct: 262 EYGFKQQMLDTLYKYAKFQYECGNYSGTAEYLYFVRVLLPPSDPNYMNACWGKLASEILM 83
Query: 180 QNWDAAMEDLTRLKETIDNNSVSSPL 205
Q+WD A+EDL +++E ID N + L
Sbjct: 82 QSWDVALEDLKKVQEIIDANQFPNAL 5
>01018
Length = 806
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 69/75 (92%)
Frame = +2
Query: 359 KLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMGNNAVSPYQQVIEKTKSLSFRSQML 418
KLNMTP++AERWIVNLIRNARLDAKIDSKLGHVVMG AVSPYQQVIEKTK+L+FRSQ+L
Sbjct: 227 KLNMTPDDAERWIVNLIRNARLDAKIDSKLGHVVMGTQAVSPYQQVIEKTKNLAFRSQVL 406
Query: 419 AMNIEKKLNQNSRSE 433
A+ IEKK + +++ +
Sbjct: 407 ALTIEKKTSGHNKQD 451
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|67906177|ref|NP_033173.2| SEC23A [Mus musculus]
(765 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11155 572 e-163
04719 30 4.1
>11155
Length = 1328
Score = 572 bits (1473), Expect = e-163, Method: Compositional matrix adjust.
Identities = 261/323 (80%), Positives = 295/323 (91%)
Frame = +2
Query: 443 TCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGAVQFVTQYQHSSGQRRIRVTTIARN 502
TCQWK+CGL P T+L ++FEVVNQHNAPIPQGGRG +QF+TQYQHSSGQRR+RVTT+ARN
Sbjct: 2 TCQWKMCGLYPNTSLGVFFEVVNQHNAPIPQGGRGYLQFITQYQHSSGQRRVRVTTVARN 181
Query: 503 WADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGPDVLRWLDRQLIRLCQKFGEYHK 562
WADA T IQ+I+A FDQEA+A+LM R+A+YRAET++GPDVLRWLDR LIRLCQKFGEYHK
Sbjct: 182 WADASTNIQHISAGFDQEASAVLMGRIAVYRAETDDGPDVLRWLDRMLIRLCQKFGEYHK 361
Query: 563 DDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPI 622
DDPNSFRFSE FSLYPQFMFHLRRS FLQVFNNSPDE+SYYRH +DLTQSLIMIQPI
Sbjct: 362 DDPNSFRFSENFSLYPQFMFHLRRSQFLQVFNNSPDETSYYRHMLDIEDLTQSLIMIQPI 541
Query: 623 LYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYENFR 682
LYAYSF GPPEPVLLD++S+ DRILLMDTFF ++IYHGETI QW K+GY D+PEYENF+
Sbjct: 542 LYAYSFHGPPEPVLLDTNSLQPDRILLMDTFFHLVIYHGETIDQWNKAGYADLPEYENFK 721
Query: 683 HLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAWGQESGAPI 742
L+QAPVDDAQEIL +RFPMPRYI TE GGSQARFLLSKVNPSQTHNNMY +GQE+GA +
Sbjct: 722 QLMQAPVDDAQEILQTRFPMPRYIVTEFGGSQARFLLSKVNPSQTHNNMYGFGQEAGASV 901
Query: 743 LTDDVSLQVFMDHLKKLAVSSAA 765
LTDDVSLQVFM+HLKKLAVSS++
Sbjct: 902 LTDDVSLQVFMEHLKKLAVSSSS 970
>04719
Length = 443
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -3
Query: 12 EERDGVRFSWNVWP--SSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAV 69
E R G R WP S+R+ V LFTP + D QY+ LCS CR++
Sbjct: 258 ESRSGSR-----WPRESARIRGHNYVPKEIILFTPFR*ADD----QYKRPLCSFCGCRSL 106
Query: 70 LN 71
N
Sbjct: 105 TN 100
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|126090932|ref|NP_077155.2| nucleolar protein 5A [Mus
musculus]
(580 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10550 568 e-162
02001 275 5e-74
05297 94 1e-19
00700 54 2e-07
>10550
Length = 1765
Score = 568 bits (1465), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/423 (65%), Positives = 337/423 (79%), Gaps = 4/423 (0%)
Frame = -2
Query: 4 LHVLFEHAVGYALLALKEVEEISLLLPQVEECVLNLGKFHNVVRLVAFCPFSSSQVALEN 63
L+VLFEHAVGYAL +KE +E++LL P+VE+ VL+L KF++VV+ A F+++ AL+N
Sbjct: 1737 LYVLFEHAVGYALFQVKEFDELALLAPRVEQNVLDLSKFNSVVKFEALAAFTNAHNALDN 1558
Query: 64 ANAVSEGVVHEDLRLLLETYLP--SKKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEI 121
N VSEGV+HEDLR LL ++P SKK KV+LG+ D K+ AAI E L +C T GVI +I
Sbjct: 1557 INCVSEGVLHEDLRTLLAKHVPKSSKKLKVMLGLADSKLAAAIVEALDISCVTTGVIPDI 1378
Query: 122 LRGVRLHFHNLV--KGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLD 179
LRG+R+HF LV L + +A KAQLGLGHSYSRAKVKFNV+RVDNMIIQSI+LLDQLD
Sbjct: 1377 LRGIRMHFAKLVGQHKLNEGTASKAQLGLGHSYSRAKVKFNVHRVDNMIIQSIALLDQLD 1198
Query: 180 KDINTFSMRVREWYGYHFPELVKIVNDNATYCRLAQFIGXXXXXXXXXXXXXXXITMDGA 239
KDINTFSMR+REWY YHFPELVKIV DN Y R Q I + MD A
Sbjct: 1197 KDINTFSMRIREWYSYHFPELVKIVPDNYLYARTVQVI-QDRKQMPEDNSQLEELLMDSA 1021
Query: 240 KAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSAL 299
K +A+LDA+R SMGMDI+ IDLINI++ +RV+ LSE+R+ L YL +M VAP+L+AL
Sbjct: 1020 KCQAVLDAARVSMGMDIAPIDLINIQALCARVIGLSEFRKELSQYLMDRMQSVAPNLAAL 841
Query: 300 IGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 359
IG+ VGARLIAHAGSLTNLAK PASTVQILGAEKALFRALKT+GNTPKYGLIFHSTFIGR
Sbjct: 840 IGDQVGARLIAHAGSLTNLAKCPASTVQILGAEKALFRALKTKGNTPKYGLIFHSTFIGR 661
Query: 360 AAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLD 419
A AKNKGRISRYLANKCSIASRIDCFS++P+S+FG+ LR+QVE+RL F+ETG+ P KN+D
Sbjct: 660 AGAKNKGRISRYLANKCSIASRIDCFSDMPSSIFGDHLRQQVEDRLKFFETGDTPAKNID 481
Query: 420 VMK 422
+M+
Sbjct: 480 IMR 472
>02001
Length = 4146
Score = 275 bits (702), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 194/306 (63%)
Frame = -1
Query: 86 SKKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQ 145
SK + L V D K+G I+EE C I E++R +R NLV DL A
Sbjct: 3849 SKDAQEELAVADAKLGNLIKEEFNIQCVANNNINELMRCIRSQLDNLVSD-KDLHAM--S 3679
Query: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIVN 205
LGL HS SR KVKF+ ++VD MI+Q+IS LD +DK+IN + MR REWY +HFPEL K+V
Sbjct: 3678 LGLAHSLSRYKVKFSPDKVDTMIVQAISTLDDIDKEINNYHMRAREWYAWHFPELPKVVT 3499
Query: 206 DNATYCRLAQFIGXXXXXXXXXXXXXXXITMDGAKAKAILDASRSSMGMDISAIDLINIE 265
++ + R +G ++ + +A+ SMG +IS DL I
Sbjct: 3498 EHEAFIRTVMKLGNKQNATSCDLSDILPEEVE----TDVKEAAEISMGTEISDDDLTVIM 3331
Query: 266 SFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPAST 325
++VSL EYR L YL+ +M +AP+L+ L+GE VGARLI+HAGSL NLAK+PAST
Sbjct: 3330 YLCKQIVSLVEYRGQLFEYLKHRMGAIAPNLTVLVGELVGARLISHAGSLMNLAKHPAST 3151
Query: 326 VQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCF 385
VQILGAEKALFRALK++ +TPKYGLI+H++ +G+A KNKG++SR LA K S+A+R+D
Sbjct: 3150 VQILGAEKALFRALKSKHDTPKYGLIYHASLVGQANPKNKGKLSRMLAAKSSLAARVDAL 2971
Query: 386 SEVPTS 391
+ T+
Sbjct: 2970 GDENTT 2953
>05297
Length = 530
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 88/157 (56%)
Frame = +2
Query: 253 GMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVGARLIAHA 312
G ++S DL+++ V LSE ++ + Y+ S+M+ +AP+LS ++G ++ A+L+ A
Sbjct: 5 GTELSDEDLMSVSEACDTAVGLSESKKHIFEYVESRMTFIAPNLSIIVGASIAAKLMGIA 184
Query: 313 GSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYL 372
G LT L+K PA + +LG++K T P G I++S + + + + +R L
Sbjct: 185 GGLTYLSKMPADNIILLGSQKRTLSGFSTTAILPHTGFIYYSDTVQKLPPDLRRKAARLL 364
Query: 373 ANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYE 409
A K ++ +R+D F G+ LR +VE +LS ++
Sbjct: 365 AGKTALCARVDGFHGSVDGKVGDDLRAEVEGKLSKWQ 475
>00700
Length = 1051
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 79/184 (42%)
Frame = +1
Query: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIVNDNATYCRLAQFIGXXXXXXXX 226
+I+ + ++ ++D +IN V++ Y FPEL +V Y + +G
Sbjct: 304 LIVDANNMTVEIDNEINVIHQFVKDVYNKRFPELESLVPTAMEYISTVKELGNNILEKSK 483
Query: 227 XXXXXXXITMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
I + A + + ++ G ++S DL+++ V LSE ++ + Y+
Sbjct: 484 NNEALQEI-LTSATIMVVSVTASTTQGTELSDEDLMSVSEACDTAVGLSESKKHIFEYVE 660
Query: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
S+M+ +AP+LS ++G ++ + A + +LG++K T P
Sbjct: 661 SRMTFIAPNLSIIVGASIA-------------VQXAADNIILLGSQKRTLSGFSTTAILP 801
Query: 347 KYGL 350
+ L
Sbjct: 802 PHRL 813
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981185|ref|NP_067489.2| phosphofructokinase, muscle
[Mus musculus]
(780 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03664 561 e-160
05449 360 1e-99
27417 32 1.1
>03664
Length = 1237
Score = 561 bits (1446), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/379 (69%), Positives = 313/379 (82%)
Frame = +3
Query: 14 IGKAIAVLTSGGDAQGMNAAVRAVVRVGIFTGARVFFVHEGYQGLVDGGEHIREATWESV 73
+G I V TSGGD+QGMN AVRAVVR+G + G +V+ + EGYQG+VDGGE+I EATW SV
Sbjct: 99 VGNTIGVFTSGGDSQGMNGAVRAVVRMGFYLGCKVYVIREGYQGMVDGGENIEEATWASV 278
Query: 74 SMMLQLGGTVIGSARCKDFREREGRLRAAHNLVKRGITNLCVIGGDGSLTGADTFRSEWS 133
S +LQLGGTVIGSAR DFR+REGRL+AA NLVKRGITNL VIGGDGSLTGAD FR EW+
Sbjct: 279 SGILQLGGTVIGSARSADFRQREGRLKAAANLVKRGITNLVVIGGDGSLTGADLFRREWA 458
Query: 134 DLLNDFQKDGKITAEEATKSSYLNIVGLVGSIDNDFCGTDMTIGTDSALHRIVEIVDAIT 193
LL + ++ G++T +E + +LNIVG+VGSIDNDFCGTDMTIGTDSALHRI+E VDAI+
Sbjct: 459 SLLTELKEKGELTGDEMVRCQHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIIEAVDAIS 638
Query: 194 TTAQSHQRTFVLEVMGRHCGYLALVTSLSCGADWVFIPECPPDDDWEEHLCRRLSETRTR 253
TTA SHQR FV+EVMGRHCGYLALV +L+C ADWVFIPE PP+ DW+ LC +L R
Sbjct: 639 TTAISHQRAFVMEVMGRHCGYLALVAALACEADWVFIPEWPPEGDWKTTLCNKLLSERKL 818
Query: 254 GSRLNIIIVAEGAIDKNGKPITSEDIKNLVVKRLGYDTRVTVLGHVQRGGTPSAFDRILG 313
G RLNII+VAEGAID+ G ITS+ +K+L+ L YDTRVTVLGHVQRGG+PSAFDRILG
Sbjct: 819 GQRLNIILVAEGAIDREGNSITSDQVKDLLTNELKYDTRVTVLGHVQRGGSPSAFDRILG 998
Query: 314 SRMGVEAVMALLEGTPDTPACVVSLSGNQAVRLPLMECVQVTKDVTKAMDEKRFDEAIKL 373
SRMG EAV+AL++ TPDTPACVVSL GNQ VR+PLMECV TKDV KAMD K F+EA++L
Sbjct: 999 SRMGAEAVLALMDATPDTPACVVSLEGNQTVRVPLMECVSRTKDVQKAMDMKNFEEAVQL 1178
Query: 374 RGRSFMNNWEVYKLLAHVR 392
RG+SF NN Y++L+ +R
Sbjct: 1179RGKSFQNNLTTYRMLSKLR 1235
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 175/359 (48%), Gaps = 29/359 (8%)
Frame = +3
Query: 401 HTVAVMNVGAPAAGMNAAVRSTVRIGLIQGNRVLVVHDGFEGLAKG--QIEEAGWSYVGG 458
+T+ V G + GMN AVR+ VR+G G +V V+ +G++G+ G IEEA W+ V G
Sbjct: 105 NTIGVFTSGGDSQGMNGAVRAVVRMGFYLGCKVYVIREGYQGMVDGGENIEEATWASVSG 284
Query: 459 WTGQGGSKLGTKRTLPKKNLE---QISANITKFNIQGLVIIGGFEAYTGG---------- 505
GG+ +G+ R+ + E + +AN+ K I LV+IGG + TG
Sbjct: 285 ILQLGGTVIGSARSADFRQREGRLKAAANLVKRGITNLVVIGGDGSLTGADLFRREWASL 464
Query: 506 -LELME-GRKQFDELC----IPFVVIPATVSNNVPGSDFSIGADTALNTICTTCDRIKQS 559
EL E G DE+ + V + ++ N+ G+D +IG D+AL+ I D I +
Sbjct: 465 LTELKEKGELTGDEMVRCQHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIIEAVDAISTT 644
Query: 560 AAGTKRRVFIIETMGGYCGYXXXXXXXXXXXXXXYIFEEP------FTIRDLQVNVEHLV 613
A + +R F++E MG +CGY +I E P T+ + ++ L
Sbjct: 645 AI-SHQRAFVMEVMGRHCGYLALVAALACEADWVFIPEWPPEGDWKTTLCNKLLSERKLG 821
Query: 614 QKMKTT-VKRGLVLRNEKCNENYTTDFIFNLYSEEGKGIFDSRKNVLGHMQQGGSPTPFD 672
Q++ V G + R + T+D + +L + E K +D+R VLGH+Q+GGSP+ FD
Sbjct: 822 QRLNIILVAEGAIDRE---GNSITSDQVKDLLTNELK--YDTRVTVLGHVQRGGSPSAFD 986
Query: 673 RNFATKMGAKAMNWMSGKIKESYRNGRIFANTPDS-GCVLGMRKRALVFQPVTELKDQT 730
R ++MGA+A+ + TPD+ CV+ + V P+ E +T
Sbjct: 987 RILGSRMGAEAVL-------------ALMDATPDTPACVVSLEGNQTVRVPLMECVSRT 1124
>05449
Length = 724
Score = 360 bits (924), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 169/240 (70%), Positives = 198/240 (82%), Gaps = 5/240 (2%)
Frame = +3
Query: 158 IVGLVGSIDNDFCGTDMTIGTDSALHRIVEIVDAITTTAQSHQRTFVLEVMGRHCGYLAL 217
IVG+VGSIDNDFCGTDMTIGTDSALHRI+E VDAI+TTA SHQR FV+EVMGRHCGYLAL
Sbjct: 3 IVGMVGSIDNDFCGTDMTIGTDSALHRIIEAVDAISTTAISHQRAFVMEVMGRHCGYLAL 182
Query: 218 VTSLSCGADWVFIPECPPDDDWEEHLCRRLSET-----RTRGSRLNIIIVAEGAIDKNGK 272
V +L+C ADWVFIPE PP+ DW+ LC +L + R G RLNII+VAEGAID+ G
Sbjct: 183 VAALACEADWVFIPEWPPEGDWKTTLCNKLLSSVALQERKLGQRLNIILVAEGAIDREGN 362
Query: 273 PITSEDIKNLVVKRLGYDTRVTVLGHVQRGGTPSAFDRILGSRMGVEAVMALLEGTPDTP 332
ITS+ +K+L+ L YDTRVTVLGHVQRGG+PSAFDRILGSRMG EAV+AL++ TPDTP
Sbjct: 363 SITSDQVKDLLTNELKYDTRVTVLGHVQRGGSPSAFDRILGSRMGAEAVLALMDATPDTP 542
Query: 333 ACVVSLSGNQAVRLPLMECVQVTKDVTKAMDEKRFDEAIKLRGRSFMNNWEVYKLLAHVR 392
ACVVSL GNQ VR+PLMECV TKDV KAMD K F+EA++LRG+SF NN Y++L+ +R
Sbjct: 543 ACVVSLEGNQTVRVPLMECVSRTKDVQKAMDMKNFEEAVQLRGKSFQNNLTTYRMLSKLR 722
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Frame = +3
Query: 528 TVSNNVPGSDFSIGADTALNTICTTCDRIKQSAAGTKRRVFIIETMGGYCGYXXXXXXXX 587
++ N+ G+D +IG D+AL+ I D I +A + +R F++E MG +CGY
Sbjct: 21 SIDNDFCGTDMTIGTDSALHRIIEAVDAISTTAI-SHQRAFVMEVMGRHCGYLALVAALA 197
Query: 588 XXXXXXYIFEEP-----------FTIRDLQVNVEHLVQKMKTT-VKRGLVLRNEKCNENY 635
+I E P + + + L Q++ V G + R +
Sbjct: 198 CEADWVFIPEWPPEGDWKTTLCNKLLSSVALQERKLGQRLNIILVAEGAIDRE---GNSI 368
Query: 636 TTDFIFNLYSEEGKGIFDSRKNVLGHMQQGGSPTPFDRNFATKMGAKAMNWMSGKIKESY 695
T+D + +L + E K +D+R VLGH+Q+GGSP+ FDR ++MGA+A+
Sbjct: 369 TSDQVKDLLTNELK--YDTRVTVLGHVQRGGSPSAFDRILGSRMGAEAVL---------- 512
Query: 696 RNGRIFANTPDS-GCVLGMRKRALVFQPVTELKDQT 730
+ TPD+ CV+ + V P+ E +T
Sbjct: 513 ---ALMDATPDTPACVVSLEGNQTVRVPLMECVSRT 611
>27417
Length = 497
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = -2
Query: 622 RGLVLRNEKCNENYTTDFIFNLYSEEGKGIFDSRKNVLGHMQQGGSPTP-FDRNFA---T 677
RG V + + + D F+ Y+ GKG DS V+ + + G P P + + A +
Sbjct: 331 RGSVKESSITSPXHARDNSFDSYTSYGKGSEDSIDEVVFEVDENGMPIPRYSSSTALNHS 152
Query: 678 KMGAKAMNWMSGKIKESYRNGRIFANTPD 706
+ G++ + G + S RN + ++PD
Sbjct: 151 QEGSRRGSERDGNMYSSDRNSGFYRSSPD 65
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|70778897|ref|NP_038846.2| GTP binding protein 1 [Mus
musculus]
(668 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04497 560 e-160
14064 115 3e-64
20898 209 2e-54
15991 40 0.003
12417 34 0.20
>04497
Length = 1188
Score = 560 bits (1443), Expect = e-160, Method: Compositional matrix adjust.
Identities = 283/392 (72%), Positives = 310/392 (79%)
Frame = -2
Query: 179 VLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWT 238
VLTHGELDNGRGFARQKLFRHKHE+ESGRTSSVGNDILGFD+ GNVVNKPD G L+W
Sbjct: 1187 VLTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDASGNVVNKPDH--GHLDWI 1014
Query: 239 KICEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALA 298
KICE ++KVITFIDLAGHE+YLKTTVFGMTGH PDF MLM+G+NAG++GMTKEHLGLALA
Sbjct: 1013 KICEDAAKVITFIDLAGHERYLKTTVFGMTGHAPDFAMLMIGANAGVIGMTKEHLGLALA 834
Query: 299 LNVPVFVVVTKIDMCPANIXXXXXXXXXXXXXSPGCRKIPVLVQSKDDVIVTASNFSSER 358
LNVPVFVVVTK+DMCP N+ SPGCRKIPV+VQ+KDDVI +A+NF+SER
Sbjct: 833 LNVPVFVVVTKVDMCPPNVLQETLKLLTRILKSPGCRKIPVIVQNKDDVICSATNFTSER 654
Query: 359 MCPIFQISNVTGENXXXXXXXXXXXSPRTSYREEEPAEFQIDDXXXXXXXXXXXXXXXXX 418
MCP+FQ+SNVTGEN S R +P EFQIDD
Sbjct: 653 MCPVFQVSNVTGENLELLKMFLNLLSTRVKCDLSKPPEFQIDDTFSVPGVGTVVSGTLLQ 474
Query: 419 XXIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMV 478
IKLNDTLLLGPD LG F I +KSIHRKRMPV+EVRGGQTASFALKKIKRSSIRKGMV
Sbjct: 473 GYIKLNDTLLLGPDALGQFQPIVIKSIHRKRMPVREVRGGQTASFALKKIKRSSIRKGMV 294
Query: 479 MVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKA 538
MVSPRL P+A WEFE EILVLHHPTTIS RYQAMVH GS+RQTATI+ M + LRTGDKA
Sbjct: 293 MVSPRLEPKACWEFEGEILVLHHPTTISIRYQAMVHVGSVRQTATIIQMTEQHLRTGDKA 114
Query: 539 TVHFRFIKTPEYLHIDQRLVFREGRTKAVGTI 570
V FRFIK PEYL + RLVFREGRTKAVGTI
Sbjct: 113 QVRFRFIKNPEYLKPNMRLVFREGRTKAVGTI 18
>14064
Length = 1723
Score = 115 bits (289), Expect(5) = 3e-64, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 85/128 (66%)
Frame = +2
Query: 211 VGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSSKVITFIDLAGHEKYLKTTVFGMTGH 270
+ DILGFD++G VVN + S+E +IC+ SSK+IT IDLAGH +YL+TT+ G+TG+
Sbjct: 41 ISYDILGFDTKGQVVNYAECR--SVE--EICQSSSKLITLIDLAGHHRYLRTTIVGLTGN 208
Query: 271 LPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANIXXXXXXXXXXXXX 330
PDF ML+V + +GIVGMTKEHLG ALAL VPV VVV K+D C A
Sbjct: 209 CPDFAMLVVSATSGIVGMTKEHLGYALALGVPVIVVVNKVDQCGAGKLQRLLTQLETILK 388
Query: 331 SPGCRKIP 338
SP RK P
Sbjct: 389 SPAVRKYP 412
Score = 114 bits (286), Expect(5) = 3e-64, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 84/133 (63%)
Frame = +2
Query: 421 IKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMV 480
I+ + LLLGP G F + V+++HR RMP + ++ GQ AS AL + R +RKGMV++
Sbjct: 689 IREGEKLLLGPSDNGTFEDVKVRTVHRNRMPCRLIQAGQAASVALLDVDRERLRKGMVLL 868
Query: 481 SPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATV 540
SP + +FEA++ VL+H I+ +Q VH G++ QTA I +++K+ ++T +KA V
Sbjct: 869 SPSSSVVCCKQFEADVYVLYHCNKITKNFQTTVHIGTVCQTAVITTINKNHIKTNEKARV 1048
Query: 541 HFRFIKTPEYLHI 553
F F PEY+ +
Sbjct: 1049VFTFKFKPEYIRV 1087
Score = 52.0 bits (123), Expect(5) = 3e-64, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Frame = +1
Query: 332 PGCRKIPVLVQSKDDVIVTA-----SNFSSERMCPIFQISNVTGENXXXXXXXXXXXSPR 386
PGC+KIP V S+DD I A +N +R+ PIF++S VTG N P+
Sbjct: 391 PGCKKIPFQVNSEDDAITVAHSLETNNVIVDRITPIFKVSCVTGHNLDLILKFLHLLPPQ 570
Query: 387 TSYREEEP-----AEFQIDD 401
S+ E E EFQID+
Sbjct: 571 RSHTERERLSQDLTEFQIDE 630
Score = 22.3 bits (46), Expect(5) = 3e-64, Method: Compositional matrix adjust.
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3
Query: 199 HKHEIESGRTS 209
H HEI+SGRTS
Sbjct: 3 HLHEIQSGRTS 35
Score = 21.6 bits (44), Expect(5) = 3e-64, Method: Compositional matrix adjust.
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 556 RLVFREGRTKAVG 568
RL+FR+G+TK G
Sbjct: 1093 RLLFRDGKTKG*G 1131
>20898
Length = 840
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/123 (81%), Positives = 106/123 (86%)
Frame = -1
Query: 452 VKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQA 511
V+EVRGGQTASFALKKIKRSSIRKGMVMVSPRL P+A WEFE EILVLHHPTTIS RYQA
Sbjct: 840 VREVRGGQTASFALKKIKRSSIRKGMVMVSPRLEPKACWEFEGEILVLHHPTTISIRYQA 661
Query: 512 MVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTIT 571
MVH GS+RQTATI+ M + LRTGDKA V FRFIK PEYL + RLVFREGRTKAVGTIT
Sbjct: 660 MVHVGSVRQTATIIQMTEQHLRTGDKAQVRFRFIKNPEYLKPNMRLVFREGRTKAVGTIT 481
Query: 572 KLL 574
L
Sbjct: 480 NLF 472
>15991
Length = 1629
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = -3
Query: 425 DTLLLGPDPLGNF----LSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMV 480
+T +L P + F L+ VKS+ ++E G F +K + IR+G V
Sbjct: 880 ETGILKPGTVVTFAPGGLTTEVKSVEMHHEQLQEALPGDNVGFNVKNVSVKDIRRGNVAG 701
Query: 481 SPRLN-PQASWEFEAEILVLHHPTTISPRYQAMVHC 515
+ + P+ + F A++++L+HP I Y ++ C
Sbjct: 700 DSKNDPPKGAKNFYAQVIILNHPGMIHAGYAPVLDC 593
>12417
Length = 954
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Frame = +2
Query: 171 AGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFD----------- 219
A K TL + H ++D R FAR K +HE E G G D L +
Sbjct: 665 APKRTLHPTMRH-KMDRDRLFARDKEVMSRHESEEGDYFPDGTDALKIELPPIVTEQPLL 841
Query: 220 -SEGNVVNKPDSHGGSLEWTKICEKSSKV 247
G V+ KPD+H L+ +I E KV
Sbjct: 842 MRGGRVMKKPDTHDEWLQ--RIKEAEEKV 922
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|82919017|ref|XP_928308.1| PREDICTED: similar to
CCR4-NOT transcription complex, subunit 1 isoform a isoform 30 [Mus
musculus]
(2383 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
15030 482 e-159
01657 279 1e-74
36991 192 1e-48
31187 184 4e-46
27543 118 6e-41
27905 150 7e-36
>15030
Length = 1392
Score = 482 bits (1240), Expect(3) = e-159, Method: Compositional matrix adjust.
Identities = 229/308 (74%), Positives = 257/308 (83%), Gaps = 3/308 (0%)
Frame = -1
Query: 1826 GGPN---FMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQ 1882
GGP MM SGI+QA E+DDPPGL EK EYLLREWVN+YHS AAGRDSTKAF+ FV Q
Sbjct: 891 GGPGNATTMMQSGITQAREFDDPPGLHEKTEYLLREWVNMYHSPAAGRDSTKAFTCFVQQ 712
Query: 1883 VELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCYHN 1942
MHQQGILKTDDLITRFFRLCTEMCV++ YRA EQ + +PT++RAKC+H
Sbjct: 711 -------MHQQGILKTDDLITRFFRLCTEMCVDLCYRALGEQ----SQSPTLVRAKCFHT 565
Query: 1943 LDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFI 2002
LDAFVRLIALLVKHSG+ +NTVTKINLLNK LGIV GVLLQDH+VR +EFQQLPYHRIFI
Sbjct: 564 LDAFVRLIALLVKHSGDNSNTVTKINLLNKXLGIVAGVLLQDHEVRYTEFQQLPYHRIFI 385
Query: 2003 MLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHT 2062
ML +ELNAPE +LE IN+Q L AFC FHILRP+KAP F +AW+ELISHR+FI R+LA T
Sbjct: 384 MLFIELNAPEPILEGINYQVLAAFCQVFHILRPSKAPAFSFAWMELISHRVFIGRLLALT 205
Query: 2063 PQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHY 2122
P Q+GW MYAQL++ LFK+LAPFLRN EL K Q+LYKGTLRVLLVLLHDFPEFLCDYHY
Sbjct: 204 PGQRGWGMYAQLMMGLFKFLAPFLRNAELQKSTQLLYKGTLRVLLVLLHDFPEFLCDYHY 25
Query: 2123 GFCDVIPP 2130
FCDVIPP
Sbjct: 24 TFCDVIPP 1
Score = 92.8 bits (229), Expect(3) = e-159, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 64/92 (69%), Gaps = 6/92 (6%)
Frame = -2
Query: 1667 EGLLD-----ATSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLI-ECRDE 1720
EGLL+ A + +LLLR+RECHL+VLK L D RA G W K+ITRCLI R+E
Sbjct: 1391 EGLLEHYIPSAITSEQQELLLRFRECHLMVLKGLADARALGPSWAPKEITRCLILMGREE 1212
Query: 1721 YKYNVEAVELLIRNHLVNMQQYDLHLAQSMEN 1752
KYN+EAVE L+R+ L++ Q+D++L+ +EN
Sbjct: 1211 SKYNLEAVETLMRSGLMSTNQFDVYLSSVLEN 1116
Score = 31.2 bits (69), Expect(3) = e-159, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -3
Query: 1761 FAMQLVKILLVDERSVAH-ITEADLFHTIETLMRINAHSRGNAPEGLPQLM 1810
F MQL++ + D+++ H +E D T++ L + SR +PEGL LM
Sbjct: 1093 FVMQLMQRICADDKNSPHSFSENDFPQTVDALNTLAVRSR-QSPEGLEGLM 944
>01657
Length = 1088
Score = 279 bits (713), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/162 (79%), Positives = 143/162 (88%)
Frame = -1
Query: 2216 RYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLN 2275
RYN+ L+NALV+YVGTQAIA I NK P+ S I HSAHMDIFQNLAVDLDTEGRYLFLN
Sbjct: 1082 RYNMTLMNALVMYVGTQAIALIRNKNFVPNTSNIAHSAHMDIFQNLAVDLDTEGRYLFLN 903
Query: 2276 AIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIE 2335
AIANQLRYPNSHTHYFSC +L+LFAEAN+EAIQEQITRVLLERLIVNRPHPWGLLITFIE
Sbjct: 902 AIANQLRYPNSHTHYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIE 723
Query: 2336 LIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2377
LIKNP +KFW+H+FVHCAPEI KLF+SVA+ C+ + Q M
Sbjct: 722 LIKNPIYKFWDHDFVHCAPEITKLFESVARSCLAKSNVTQQM 597
>36991
Length = 633
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/149 (60%), Positives = 114/149 (76%)
Frame = -1
Query: 1 MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD 60
MNLDSLS AL++IS+ V NLTKKNY++S I H+V +HG EADRHL RCL SH+DFSGD
Sbjct: 447 MNLDSLSFALAEISFSVANLTKKNYKSSVAGINHLVAKHGAEADRHLFRCLLSHIDFSGD 268
Query: 61 GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK 120
GKSSGKD +Q Q+L + + +PNF+S L YAID+PLH+QK+LKP+ L QLSKVLK
Sbjct: 267 GKSSGKDLYQIQYLTVDSNHFLGRPNFVSILCYAIDDPLHHQKTLKPSAQLLPQLSKVLK 88
Query: 121 LSKVQEVIFGLALLNSSSPDLRGFAAQFI 149
L++VQEV++ LLNSS D +A QF+
Sbjct: 87 LNRVQEVVYAFGLLNSSKQDTVQYATQFL 1
>31187
Length = 391
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 99/120 (82%), Gaps = 4/120 (3%)
Frame = -2
Query: 2252 SAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQI 2311
S HMDI + LFL AI+NQLRYPNSHTHYFSC +LYLFA+A++EA+QEQI
Sbjct: 372 STHMDISRTWPSTSTQRVGTLFLTAISNQLRYPNSHTHYFSCCLLYLFAQAHSEAVQEQI 193
Query: 2312 TRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIE----KLFQSVAQCC 2367
TRVLLERLIVNRPHPWGLLITFIELIKNP+FKFW+HEFVHCAPEIE +LF+SVA+ C
Sbjct: 192 TRVLLERLIVNRPHPWGLLITFIELIKNPSFKFWHHEFVHCAPEIENVCRRLFESVARSC 13
>27543
Length = 391
Score = 118 bits (295), Expect(2) = 6e-41, Method: Composition-based stats.
Identities = 59/79 (74%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = +3
Query: 1134 LVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSD-KAAANFSDRSLL 1192
LVMKR SIEPNFH LYS+F+D LK + KMVL ETYRNIKVLL SD K ANFSDRSLL
Sbjct: 3 LVMKRASIEPNFHVLYSSFIDVLKIMQLTKMVLKETYRNIKVLLQSDIKGVANFSDRSLL 182
Query: 1193 KNLGHWLGMITLAKNKPIL 1211
KNLGHWLGM+TL K P L
Sbjct: 183 KNLGHWLGMMTLGKINPSL 239
Score = 70.5 bits (171), Expect(2) = 6e-41, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = +2
Query: 1206 KNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVFRPP 1255
++KPIL TD+D+KSL+ EAY KG QELLYVVPF AKVLES +S VF+ P
Sbjct: 221 QDKPILMTDMDLKSLVYEAYQKGAQELLYVVPFTAKVLESCAKSKVFKAP 370
>27905
Length = 839
Score = 150 bits (379), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 130/232 (56%), Gaps = 4/232 (1%)
Frame = +3
Query: 228 YPEKRDILMDRILPDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTA 287
YP++ L D + P GG S L +Q+ G C + G+RE+
Sbjct: 225 YPQQHAFLHDGVQP--GGANHG---SWLCLHIQQGGVSQCDA-----------GLRELNP 356
Query: 288 AQVARVLGMMARTHSGLTDGIPLQSISAPGSGIWSDGKDKSEGAQAHTWNVEVLIDVLKE 347
VARVLGMMART +GL + QS S+ W + K+E TWNVE I V ++
Sbjct: 357 QAVARVLGMMARTITGLGE----QSQSS----WWGE---KTETPGVTTWNVETFIQVTRD 503
Query: 348 LNPSLNFKEVTYELDHPGFQIRDSKGLHNVVYGIQRGLGME--VFPVDFIYRPWKHAEGQ 405
L L++K+V +LDHPGF I KGL +V G+QRGL + FP+ I+RPW + EGQ
Sbjct: 504 LAGMLDWKDVVAQLDHPGFIINSKKGLRLLVEGLQRGLQLSNTAFPIHHIFRPWNNTEGQ 683
Query: 406 LSFIQHSLINPEVFCFADYPCHT--VATDILKAPPEDDNREIATWKSLDLIE 455
LS I L + +V CFADY T V ++LK+ P DD+RE++TWK L+++E
Sbjct: 684 LSLILACLRHHDVMCFADYLSVTEVVVCEVLKSAPSDDDREVSTWKCLNMVE 839
Score = 97.4 bits (241), Expect = 7e-20, Method: Composition-based stats.
Identities = 48/114 (42%), Positives = 74/114 (64%)
Frame = +1
Query: 165 VSGNQEGGFQDIAIEVXXXXXXXXXFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLA 224
V+G QEGG QD +E G + A+G+G+EQ +A LKTL+RDFP+ER P +L+
Sbjct: 1 VTGRQEGGLQDAGVEALHLLLSHLLRG-RDAYGIGKEQKEALLKTLQRDFPRERVPAILS 177
Query: 225 PLLYPEKRDILMDRILPDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIM 278
LLYP+ DI + +++ + +MMES+LA+ + E GY +S EECR++++
Sbjct: 178 YLLYPDVVDISVTQLI-TLNNMPSSMMESNLAELIMEAGYACTSSKEECRSVML 336
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31980969|ref|NP_062761.2| SEC23B [Mus musculus]
(767 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11155 549 e-156
>11155
Length = 1328
Score = 549 bits (1415), Expect = e-156, Method: Compositional matrix adjust.
Identities = 250/323 (77%), Positives = 291/323 (90%)
Frame = +2
Query: 445 TSQWKICGLDPSSTLGIYFEVVNQHNAPVPQGGRGAIQFVTQYQHSSTQKRIRVTTIARN 504
T QWK+CGL P+++LG++FEVVNQHNAP+PQGGRG +QF+TQYQHSS Q+R+RVTT+ARN
Sbjct: 2 TCQWKMCGLYPNTSLGVFFEVVNQHNAPIPQGGRGYLQFITQYQHSSGQRRVRVTTVARN 181
Query: 505 WADAQSQLRHIEAAFDQEAAAVLMARLGVFRAESEEGPDVLRWLDRQLIRLCQKFGQYNK 564
WADA + ++HI A FDQEA+AVLM R+ V+RAE+++GPDVLRWLDR LIRLCQKFG+Y+K
Sbjct: 182 WADASTNIQHISAGFDQEASAVLMGRIAVYRAETDDGPDVLRWLDRMLIRLCQKFGEYHK 361
Query: 565 EDPTSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSPDESSYYRHHFARQDLTQSLIMIQPI 624
+DP SFR S++FSLYPQFMFHLRRS FLQVFNNSPDE+SYYRH +DLTQSLIMIQPI
Sbjct: 362 DDPNSFRFSENFSLYPQFMFHLRRSQFLQVFNNSPDETSYYRHMLDIEDLTQSLIMIQPI 541
Query: 625 LYSYSFHGPPEPVLLDSSSILADRILLMDTFFQIVIYLGETIAQWRKAGYQDMPEYENFK 684
LY+YSFHGPPEPVLLD++S+ DRILLMDTFF +VIY GETI QW KAGY D+PEYENFK
Sbjct: 542 LYAYSFHGPPEPVLLDTNSLQPDRILLMDTFFHLVIYHGETIDQWNKAGYADLPEYENFK 721
Query: 685 HLLQAPLDDAQEILQARFPMPRYINTEHGGSQARFLLSKVNPSQTHNNLYAWGQETGAPI 744
L+QAP+DDAQEILQ RFPMPRYI TE GGSQARFLLSKVNPSQTHNN+Y +GQE GA +
Sbjct: 722 QLMQAPVDDAQEILQTRFPMPRYIVTEFGGSQARFLLSKVNPSQTHNNMYGFGQEAGASV 901
Query: 745 LTDDVSLQVFMDHLKKLAVSSAS 767
LTDDVSLQVFM+HLKKLAVSS+S
Sbjct: 902 LTDDVSLQVFMEHLKKLAVSSSS 970
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|33859660|ref|NP_036154.1| epsilon isoform of
regulatory subunit B56, protein phosphatase 2A [Mus musculus]
(467 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00299 497 e-156
01605 473 e-133
05988 205 3e-53
23660 29 4.3
>00299
Length = 1481
Score = 497 bits (1280), Expect(2) = e-156, Method: Compositional matrix adjust.
Identities = 240/327 (73%), Positives = 281/327 (85%), Gaps = 4/327 (1%)
Frame = +1
Query: 44 ELTPLPLLKDVPTSEQPELFLKKLQQCCVIFDFM-DTLSDLKMKEYKRSTLNELVDYITI 102
EL L LLKD +E+ ELF++KL+QC V+FDF+ D LSDLK KE KR+ LNE+V+Y+T
Sbjct: 313 ELQKLALLKDATPAEREELFVQKLRQCIVLFDFVQDPLSDLKWKEVKRAALNEMVEYVTQ 492
Query: 103 SRGCLTEQTYPEVVRMVSCNIFRTLPPSDS---NEFDPEEDEPTLEASWPHLQLVYEFFI 159
+RG +TE YPE + M + N+FRTLPPS + EFDPEEDEPTLEA+WPHLQLVYEFF+
Sbjct: 493 NRGVITEAIYPEAITMFAVNLFRTLPPSSNPSGAEFDPEEDEPTLEAAWPHLQLVYEFFL 672
Query: 160 RFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRK 219
RFLES +FQP+ K+YIDQKFVLQLL+LFDSEDPRERD+LKT+LHRIYGKFLGLRAFIRK
Sbjct: 673 RFLESPDFQPNTVKRYIDQKFVLQLLDLFDSEDPRERDFLKTILHRIYGKFLGLRAFIRK 852
Query: 220 QINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSL 279
INNIF F+YETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+PLH V+SLS+
Sbjct: 853 HINNIFYSFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSV 1032
Query: 280 FHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVK 339
+H QLAYC+VQFLEKDP+LTE VI GL+K+WPK S KEVMFL ELEEILDVIEP++F K
Sbjct: 1033YHPQLAYCVVQFLEKDPNLTEQVIMGLLKYWPKVHSPKEVMFLNELEEILDVIEPAEFTK 1212
Query: 340 IQEPLFKQIAKCVSSPHFQVAERALYY 366
+ PLFKQ+AKCVSSPHFQVAERALY+
Sbjct: 1213VMVPLFKQLAKCVSSPHFQVAERALYF 1293
Score = 73.6 bits (179), Expect(2) = e-156, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Frame = +3
Query: 366 YWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMN 418
+WNNEYI+SLI +N + I+P+MF +LY+ SKEHWN I L+YN LK FMEMN
Sbjct: 1290 FWNNEYILSLISDNVSSIMPLMFPALYK-SKEHWNKTIHGLIYNALKLFMEMN 1445
>01605
Length = 971
Score = 473 bits (1216), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/310 (73%), Positives = 267/310 (86%), Gaps = 4/310 (1%)
Frame = -3
Query: 58 EQPELFLKKLQQCCVIFDFM-DTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVV 116
E+ ELF++K++QC V+FDF+ D LSDLK KE KR+ LNE+V+++T +RG +TE YPE +
Sbjct: 969 EREELFVQKIRQCSVLFDFVQDPLSDLKWKEVKRAALNEMVEFVTQNRGVVTEPIYPEAI 790
Query: 117 RMVSCNIFRTLPPS---DSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAK 173
M S N+FRTLPPS + EFDPEEDEPTLEA+WPHLQL+YEFF+RFLES +FQP+ AK
Sbjct: 789 TMFSVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLIYEFFLRFLESPDFQPNTAK 610
Query: 174 KYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETE 233
+YIDQKFVLQLL+LFDSEDPRERD+LKT+LHRIYGKFLGLRAFIRK INNIF F+YETE
Sbjct: 609 RYIDQKFVLQLLDLFDSEDPRERDFLKTILHRIYGKFLGLRAFIRKHINNIFYSFIYETE 430
Query: 234 HFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLE 293
H NG+AELLEILGSIINGFALPLK EHK FL+KVL+PLH V+SLS++H QLAYC+VQFLE
Sbjct: 429 HHNGIAELLEILGSIINGFALPLKEEHKTFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLE 250
Query: 294 KDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVS 353
KDPSLTE VI GL+KFWPK S KEVMFL ELEEILDVIEP++F K+ PLFKQ+AKCVS
Sbjct: 249 KDPSLTEQVIIGLLKFWPKVHSPKEVMFLNELEEILDVIEPAEFTKVMGPLFKQLAKCVS 70
Query: 354 SPHFQVAERA 363
SPHFQ R
Sbjct: 69 SPHFQNDTRV 40
>05988
Length = 569
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/124 (79%), Positives = 111/124 (89%)
Frame = +2
Query: 243 EILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPV 302
EILGSIINGFALPLK EHK FL+KVL+PLH V+SLS++H QLAYC+VQFLEKDPSLTE V
Sbjct: 2 EILGSIINGFALPLKEEHKTFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDPSLTEQV 181
Query: 303 IRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAER 362
I GL+KFWPK S KEVMFL ELEEILDVIEP++F K+ PLFKQ+AKCVSSPHFQVAER
Sbjct: 182 IIGLLKFWPKVHSPKEVMFLNELEEILDVIEPAEFTKVMGPLFKQLAKCVSSPHFQVAER 361
Query: 363 ALYY 366
ALY+
Sbjct: 362 ALYF 373
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +1
Query: 351 CVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNV 410
C+ S F +WNNEYI+SLI +N + ++P+MF +LY+ SKEHWN I L+YN
Sbjct: 328 CLKSA-FSGGRTCSVFWNNEYILSLISDNVSSVMPLMFPALYK-SKEHWNKTIHGLIYNA 501
Query: 411 LKAFMEMNSTMFDELTATYKSD 432
LK FMEMN +FD+ T YK++
Sbjct: 502 LKLFMEMNQKLFDDCTQQYKAE 567
>23660
Length = 1021
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 244 ILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLF 280
I G+I +GFA ++ + Q L + L+ ++T +LSLF
Sbjct: 732 IFGNIPDGFATMIQVKESQNLCESLLKMYTYLTLSLF 842
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|7110703|ref|NP_032976.1| protease (prosome,
macropain) 26S subunit, ATPase 5 [Mus musculus]
(406 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19129 548 e-156
07243 315 1e-86
23766 271 1e-84
01642 285 2e-77
07247 237 2e-74
02582 177 5e-45
12235 160 1e-39
03022 150 8e-37
26408 123 2e-28
00810 107 8e-24
20270 103 2e-22
38672 83 3e-21
25671 84 1e-16
02194 67 1e-11
17843 62 3e-10
26887 51 7e-07
06766 45 6e-05
19561 44 1e-04
14413 44 1e-04
01279 34 0.086
37695 34 0.12
05247 32 0.47
02744 31 0.94
>19129
Length = 1020
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/321 (84%), Positives = 284/321 (88%), Gaps = 1/321 (0%)
Frame = +1
Query: 7 EQMELEEGKAG-SGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVXXXXXXXXX 65
EQME+E G G++QYY+SKIEE QLIVN+K+QNLRRL+AQRNELNAKV
Sbjct: 58 EQMEIEGAPVGHEGIKQYYISKIEEQQLIVNEKTQNLRRLEAQRNELNAKVRMLREELQL 237
Query: 66 XXXXGSYVGEVVRAMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNDSYTLHK 125
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRNDSY LHK
Sbjct: 238 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDMNSVTPNCRVALRNDSYVLHK 417
Query: 126 ILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG 185
ILPNKVDPLVSLMMVEKVPDSTYEM+GGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG
Sbjct: 418 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG 597
Query: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245
VLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPSI
Sbjct: 598 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 777
Query: 246 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305
IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFE +NIKVIMATNRIDILDSAL
Sbjct: 778 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEPKQNIKVIMATNRIDILDSAL 957
Query: 306 LRPGRIDRKIEFPPPNEEARL 326
LRPGRIDRKIEFPPPNEEARL
Sbjct: 958 LRPGRIDRKIEFPPPNEEARL 1020
>07243
Length = 1112
Score = 315 bits (808), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/278 (56%), Positives = 201/278 (72%)
Frame = +1
Query: 113 RVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 172
RVAL + T+ + LP +VDPLV M E D TY IGGL +QI+E++EVIELP+ +P
Sbjct: 97 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTEQIRELREVIELPLLNP 276
Query: 173 ELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVR 232
ELF +GI PKG LLYGPPGTGKTLLARAVA D F++V S +V K+IGE AR++R
Sbjct: 277 ELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIR 456
Query: 233 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 292
E+F AR+H P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF++ +K+I
Sbjct: 457 EMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMI 636
Query: 293 MATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 352
MATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+ + I+ I +L
Sbjct: 637 MATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALIIAKHGEIDYEAIVKLSD 816
Query: 353 GASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
+GA+++ VCTEAG++A+R R +V QEDF AV KV
Sbjct: 817 NFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKV 930
>23766
Length = 1463
Score = 271 bits (692), Expect(2) = 1e-84, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 166/218 (76%)
Frame = +1
Query: 179 GIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 238
G PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 142 GNQAPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 321
Query: 239 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRI 298
EHAPSI+F+DEID++G+ R E SGG+ E+QRTMLELLNQLDGF++ ++KVIMATNRI
Sbjct: 322 EEHAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 501
Query: 299 DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAE 358
+ LD AL+RPGRIDRKIEFP P+E+ + I IH+ +M L +N+ SGA+
Sbjct: 502 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAGDVNIDDYVMSKDDLSGAD 681
Query: 359 VKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 396
+K +CTEAG+ ALRERR+ V EDF A V+ + +E
Sbjct: 682 IKAICTEAGLLALRERRMKVRNEDFAKAKENVLYRKNE 795
Score = 60.5 bits (145), Expect(2) = 1e-84, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +2
Query: 133 PLVSLMM-VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK 184
P+V++M EK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI K
Sbjct: 2 PMVTVMKGWEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKHQK 160
>01642
Length = 1406
Score = 285 bits (729), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/267 (50%), Positives = 185/267 (69%)
Frame = -1
Query: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
P ++ + + + P Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL
Sbjct: 1058 PQRLTAVSQCFKLMRSPT*XYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVL 879
Query: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIF 247
+YGPPG GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF
Sbjct: 878 MYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIF 699
Query: 248 MDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307
+DEID+I + R + +G D EVQR +LELLNQ+DGF+ T N+KVIMATNR D LD ALLR
Sbjct: 698 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTVNVKVIMATNRADTLDPALLR 519
Query: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 367
PGR+DRKIEFP P+ + I + KMN++ ++L SGA++ +C EAG
Sbjct: 518 PGRLDRKIEFPLPDRRQKRLIFSTITGKMNISEEVDLEDYVARPDKISGADINAICQEAG 339
Query: 368 MYALRERRVHVTQEDFEMAVAKVMQKD 394
M A+RE R V +DFE ++KD
Sbjct: 338 MQAVRENRYVVLAKDFEKGYKNNIKKD 258
>07247
Length = 1753
Score = 237 bits (605), Expect(2) = 2e-74, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 146/199 (73%)
Frame = -2
Query: 192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEI 251
PGTGKTLLARAVA DC F++V S +V K+IGE AR++RE+F AR+H P IIFMDEI
Sbjct: 1407 PGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARLIREMFAFARDHEPCIIFMDEI 1228
Query: 252 DSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRI 311
D+IG R G+ D E+QRT++ELLNQ+DGF+A +K+IMATNR D LD ALLRPGR+
Sbjct: 1227 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRL 1048
Query: 312 DRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYAL 371
DRKIE PNE+ARL+ILKIH+ + I+ + +L +GA+++ VCTEAGM+A+
Sbjct: 1047 DRKIEISLPNEQARLEILKIHANPIAKHGEIDWEAVVKLSEDFNGADLRNVCTEAGMFAI 868
Query: 372 RERRVHVTQEDFEMAVAKV 390
R R +V +EDF AV KV
Sbjct: 867 RAERDYVIEEDFMKAVRKV 811
Score = 60.1 bits (144), Expect(2) = 2e-74, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = -1
Query: 131 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 190
+DPLV M VE D T+ IGGL +Q++E++EVIELP+ +PELF+ +GI + K
Sbjct: 1588 MDPLVYNMSVEDPGDITFNQIGGLGEQVRELREVIELPLLNPELFQRVGITRLKAACCSD 1409
Query: 191 P 191
P
Sbjct: 1408 P 1406
>02582
Length = 1101
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 165/293 (56%), Gaps = 34/293 (11%)
Frame = +3
Query: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
+ IGGLD +I++ +E P+ +P+ F+ALG+ KGVLLYGPPG GKT LA+A A
Sbjct: 138 WTDIGGLDLVKLQIRQAVEWPLLYPDTFQALGLPLTKGVLLYGPPGCGKTTLAQAAATAC 317
Query: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
TF+ +S ++L ++G+ + + E F AR APSI+F+DE+D+I R + S G
Sbjct: 318 HVTFLSLSCAQLYSPYVGDAEKKISETFQKARALAPSILFLDEMDAIVGKRSD-SSLGSG 494
Query: 268 EVQRTMLELLNQLDGF-------------------------------EA-TKNIKVIMAT 295
+R + LLN++DG EA +++ V+ AT
Sbjct: 495 VSERVLSALLNEMDGIGVRLDDKSDSREMEIEGSSDHTPQVRQHAVKEAHDRHVLVVAAT 674
Query: 296 NRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGAS 355
NR D+LD ALLRPGR+DR I PPP+ + RL IH+RKM L + ++++++A+L G +
Sbjct: 675 NRPDMLDPALLRPGRMDRLIYVPPPDVQGRLQSFTIHTRKMPLGKDVDVKQLADLTAGYT 854
Query: 356 GAEVKGVCTEAGMYALRERRVH--VTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
GA++K +C E G+ AL+E V Q+ F A+ S + ++ ++K
Sbjct: 855 GADIKTLCNEVGLLALKESMSAECVNQDHFLNAIKTRKPSLSADSSEVETMYK 1013
>12235
Length = 1749
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 115/183 (62%), Gaps = 2/183 (1%)
Frame = +1
Query: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 270
FI VSGSE ++ F+G G VR++F AR++AP I+F+DEID++G R GG SE +
Sbjct: 16 FITVSGSEFLEMFVGVGPSRVRDMFATARKNAPCILFVDEIDAVGRKRSGRNFGGQSEQE 195
Query: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
T+ +LL ++DGF + V+ ATNR+DILD+ALLRPGR DR+I P P+ + R I K
Sbjct: 196 NTLNQLLVEMDGFNTQTGVVVLAATNRVDILDAALLRPGRFDRQIFVPLPDIKXRASIFK 375
Query: 331 IH--SRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVA 388
+H K + + RK+A L PG SGA++ VC EA + A R+ + FE A+
Sbjct: 376 VHLDPLKTEVNKNDLARKMAALTPGFSGADIANVCNEAALIAARDLNTSIHMTHFEQAIE 555
Query: 389 KVM 391
+V+
Sbjct: 556 RVV 564
>03022
Length = 2255
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 4/248 (1%)
Frame = +2
Query: 130 KVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLY 189
K P VP +T+E +G L ++K+ I + PE+ A G+ G++L
Sbjct: 1370 KAQPAAKREGFATVPTTTWEDVGALSNVRAQLKDSILCRIHDPEVSSAFGLPTNSGIILV 1549
Query: 190 GPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 249
GPPG GKTL+A+A+A+ FI + G EL+ K++GE R +RE F A+ AP +IF D
Sbjct: 1550 GPPGCGKTLVAKAMANEAGLNFIYIKGPELLDKYVGESERNLREKFDKAQACAPCLIFFD 1729
Query: 250 EIDSIGSSRL--EGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307
E+D++ S+R +G + G S +LL +DG + V+ ATN I+ +D AL R
Sbjct: 1730 EMDTLCSNRQNNDGSNVGKSVTN----QLLALMDGCGERSQVYVMGATNIIENVDPALQR 1897
Query: 308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTR--GINLRKIAELMPGASGAEVKGVCTE 365
PGR DRKI P+ + RLDIL+ ++ + + +++++A+ G SGA++K + E
Sbjct: 1898 PGRFDRKIFIGLPDTDGRLDILRALTKGGSQRKLESCDMQQLAQDTEGFSGADLKHLVNE 2077
Query: 366 AGMYALRE 373
A AL+E
Sbjct: 2078 ASTIALKE 2101
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Frame = +1
Query: 142 KVPDSTYEMIGGLDKQIKEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 199
+P +T + GG +K + E+ E L + + A + LLYGP G+GK L
Sbjct: 508 SIPTATLDDFGGSNKLLAELDSDFEEILYSDYCQYASACDQKACRRYLLYGPRGSGKRFL 687
Query: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
A +A ++ + L+ G+ + VR+LF A AP ++++++I+ +
Sbjct: 688 AECIAGQLKLPLLKPKINTLISGVSGDSEQRVRDLFDQAVSQAPCVLYLEDIECLA 855
>26408
Length = 463
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Frame = +1
Query: 70 GSYVGEVVRAMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPN--CRVALRNDSYTLHKIL 127
GSYVGEVV+ MDKKKVLVKVHPEGKF CR A R LH
Sbjct: 25 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDFGQEY*YKRCYAQLPCRTAQRK----LHTTQ 192
Query: 128 PNKVDPLVSLMMVEKVPDSTYEMIGG--LDKQIKEIKEVIELPVKHPELFEALGIAQPKG 185
+ + + + + + G L + IKEVIELPVKHPELF+ALGIAQPKG
Sbjct: 193 DLAKQSGSASFVDDGRKSARFNIRNGWWLG*ANQRIKEVIELPVKHPELFDALGIAQPKG 372
Query: 186 VLLYGPPGTGKTLLARAVAHHT 207
VLLYGPPGTGKTLLARAVAHHT
Sbjct: 373 VLLYGPPGTGKTLLARAVAHHT 438
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 69/107 (64%)
Frame = +2
Query: 109 TPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELP 168
TPNCRVALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLDKQIKE + P
Sbjct: 143 TPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKESRR*SNCP 322
Query: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVS 215
P + + P K L + +CTFIRVS
Sbjct: 323 SSIPNCSMPWALLSQRVYCCTVRPVLAKRCLPVRLPITPECTFIRVS 463
>00810
Length = 1431
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 3/223 (1%)
Frame = -3
Query: 154 LDKQIKEIKEVIELPVKHPELFEALGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFI 212
L+ I+++KE + LP K +LF + QP KGVLL+GPPG GKT++A+A A FI
Sbjct: 1429 LEDVIQDVKETVILPFKRADLFRHSSLLQPPKGVLLHGPPGCGKTMIAKATAKAAGARFI 1250
Query: 213 RVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRT 272
+ S LV K+ GE + +F +A + P+IIF+DEIDS SR + ++
Sbjct: 1249 NLQVSSLVDKWYGESQKRAEAVFSLAIKLQPTIIFIDEIDSFLRSRTSTDHEATAMIK-- 1076
Query: 273 MLELLNQLDGFEATKNIKVIM--ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
+ ++ DG + +V++ ATNR +D+A+LR I P P + + L
Sbjct: 1075 -TQFMSFWDGLMTDPDCRVMVMGATNRPQDVDAAILRRMPSMFHIGLPGPAQRRSIFNLI 899
Query: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
+ +++ +N ++AE+ G SG++++ VC A + + E
Sbjct: 898 LSKERID---ALNYDELAEMTDGFSGSDIREVCRAAAVATVHE 779
>20270
Length = 542
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 2/126 (1%)
Frame = -3
Query: 184 KGVLLYGPPGTGKTLLARAVAHH-TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242
+G+LLYGPPGTGK+ LA+AVA + TF VS S+LV K++GE ++V+ LF +ARE+
Sbjct: 378 RGILLYGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGESEKLVKTLFQLARENQ 199
Query: 243 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDIL 301
PSIIF+DE+D++ SR E S +R E L Q+ G + V+ ATN L
Sbjct: 198 PSIIFIDEVDALCGSRSENES---ESARRIKTEFLVQMQGVGNDNTGVLVLGATNIPWTL 28
Query: 302 DSALLR 307
DSA+ R
Sbjct: 27 DSAIRR 10
>38672
Length = 730
Score = 82.8 bits (203), Expect(2) = 3e-21, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 18/140 (12%)
Frame = -3
Query: 268 EVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
EV+R ++ +LL +DG + ++ V+ ATNR + +D+AL R GR DR+++ P+ RL
Sbjct: 596 EVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDAALRRFGRFDREVDIGIPDATGRL 417
Query: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER------------ 374
+IL+IH++ M L ++L ++A G GA+V +C+EA + +RE+
Sbjct: 416 EILRIHTKNMKLADDVDLEQVASETHGHVGADVAALCSEAALQQIREKMDLIDLEDDTID 237
Query: 375 -----RVHVTQEDFEMAVAK 389
+ VT +DF A+ K
Sbjct: 236 AEVLDSLAVTMDDFRWALGK 177
Score = 36.6 bits (83), Expect(2) = 3e-21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
++ K GE +R+ F A ++AP+IIF+DE+D+I R
Sbjct: 730 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR 611
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = -3
Query: 142 KVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLL 188
+VP+ ++E +GGL+ KE++E+++ PV+HPE F G+ KGVL
Sbjct: 143 EVPNVSWEDVGGLENVKKELQELVQYPVEHPEKFLKFGMTPSKGVLF 3
>25671
Length = 441
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 65/111 (58%), Gaps = 8/111 (7%)
Frame = +2
Query: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS 253
TGKT+LA+AVA TF VS S L K+ GE ++VR LF MA +APS IF+DEIDS
Sbjct: 2 TGKTMLAKAVATECGTTFFNVSTSSLANKYRGESEKLVRLLFEMAHFYAPSTIFIDEIDS 181
Query: 254 IGSSRLEGGSGGDSE---VQRTMLELLNQLDGFEAT-----KNIKVIMATN 296
I S R G DSE +R ELL Q+DG T K + V+ ATN
Sbjct: 182 ICSKR-----GSDSEHEASRRVKSELLVQMDGVGVTNDDPSKAVMVLAATN 319
>02194
Length = 1891
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Frame = -1
Query: 172 PELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMV 231
P + GI +G LLYGPPG GK+ A+A D ++ SE G +
Sbjct: 1531 PRWYMDRGIPYRRGYLLYGPPGCGKSSYIMALAGALDYNICVLNLSE-----KGLSDDRL 1367
Query: 232 RELFVMAREHAPSIIFMDEIDSIGSSR--------LEGGSGGDSEVQRTMLELLNQLDGF 283
L +A E SII ++++D+ SR + G G + T LLN LDG
Sbjct: 1366 NHLLTVAPEQ--SIILLEDVDAAFLSRDLSKENPAMYQGMG-----RLTFSGLLNALDGV 1208
Query: 284 EATKNIKVIMATNRIDILDSALLRPGRIDRK 314
+ + V M TN +D LD AL+RPGR+D K
Sbjct: 1207 ASAEARIVFMTTNYLDRLDPALIRPGRVDMK 1115
>17843
Length = 772
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Frame = +1
Query: 180 IAQPKGVLLYGPPGTGKTLLARAVA--------HHTDC-TFIRVSGSELVQKFIGEGARM 230
I+ + +LL+GPPGTGKT L +A+A H C + ++ L K+ E ++
Sbjct: 175 ISWNRVILLHGPPGTGKTTLCKALAHKLCIRLSHRFSCGQLVEINSHSLFSKWFSESGKL 354
Query: 231 VRELF-----VMAREHAPSIIFMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFE 284
V ++F M + +DE++S+ ++R +G + S+ R + +L Q+D +
Sbjct: 355 VTKMFQRLHDYMVDPELLVCVLIDEVESLTAARKSCLNGNEPSDAIRVVNAVLTQIDQLK 534
Query: 285 ATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN 337
N ++ +N +D A + R D K PP A I KI+ +N
Sbjct: 535 KFANCLILTTSNITGAIDLAFV--DRADIKQYIGPPTPPA---IYKIYLSCLN 678
>26887
Length = 410
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = -3
Query: 258 RLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 295
R E SGG+ E+QRTMLELLNQLDGF++ ++KV + T
Sbjct: 168 RYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVHLXT 55
>06766
Length = 976
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2
Query: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 369
R+D+ I P P++++R ILK + RK L + ++L IA++ G SGA++ +C A
Sbjct: 2 RLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKL 181
Query: 370 ALRE 373
A+R+
Sbjct: 182 AIRQ 193
>19561
Length = 474
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Frame = -1
Query: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE--LVQKFIGEGARMVRELFVMAREH 241
K LL GPPG GKT LA VA H + ++ S+ V+ F + + VM +
Sbjct: 378 KVALLCGPPGLGKTTLAHIVAKHAGYNVVEMNASDDRSVEVFSNKIEAATQMRAVMGADP 199
Query: 242 APSIIFMDEIDSIGSS----------RLEGGSGG 265
P+ + +DEID + R E G+GG
Sbjct: 198 RPNCLIIDEIDGAPQAAVNVLLNILKRPEAGAGG 97
>14413
Length = 826
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Frame = +2
Query: 199 LARAVAHHTDCTF-----IRVSGSELVQKFIGEGARMVRELFVMAREHAPS-----IIFM 248
LA +A T +F + ++ L K+ E ++V LF E A + +
Sbjct: 23 LAEKLAIRTQNSFAYTHLVEINSHSLFSKWFSESGKLVARLFGKIGELATDKNNLVCVLI 202
Query: 249 DEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 308
DE++S+ +R S + R + +L QLD +A N+ ++ +N +D A L
Sbjct: 203 DEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDEIKACPNVLILATSNLAQSIDLAFLDR 382
Query: 309 GRIDRKIEFPPP 320
I + I P P
Sbjct: 383 ADIRQFIGLPDP 418
>01279
Length = 2183
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -3
Query: 184 KGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSEL 219
+ VLL GPPGTGKT +A A+A F + GSE+
Sbjct: 1914 RAVLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEV 1801
>37695
Length = 156
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 363 CTEAGMYALRERRVHVTQEDFEMAV 387
CTEAGM+A+R RR T++DF AV
Sbjct: 9 CTEAGMFAIRARRKMATEKDFLDAV 83
>05247
Length = 375
Score = 32.0 bits (71), Expect = 0.47, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 310 RIDRKIEFPPPNEEARLDILKIHSRK 335
R+DR I PPP+ + RL IH+RK
Sbjct: 2 RMDRLIYVPPPDVQGRLQSFTIHTRK 79
>02744
Length = 3030
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 190 GPPGTGKTLLARAVAHHTD---CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242
G G G+ + + HHT TF + ELVQ+ + E +V+ LF +A+EHA
Sbjct: 2767 GAEGRGRDSQSHCLGHHTTPRLLTFDNLLFEELVQQKVAEVRIIVKGLFDVAQEHA 2934
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|9790051|ref|NP_062677.1| phosphofructokinase,
platelet [Mus musculus]
(784 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03664 545 e-155
05449 350 2e-96
18160 32 0.67
25936 29 6.1
>03664
Length = 1237
Score = 545 bits (1404), Expect = e-155, Method: Compositional matrix adjust.
Identities = 260/375 (69%), Positives = 304/375 (81%)
Frame = +3
Query: 23 GKAIGVLTSGGDAQGMNAAVRAVVRMGIYTGAKVYFIYEGYQGLVDGGSNIVEAKWDCVS 82
G IGV TSGGD+QGMN AVRAVVRMG Y G KVY I EGYQG+VDGG NI EA W VS
Sbjct: 102 GNTIGVFTSGGDSQGMNGAVRAVVRMGFYLGCKVYVIREGYQGMVDGGENIEEATWASVS 281
Query: 83 SILQVGGTIIGSARCKAFRSREGRLKAACNLARLGITNLCVIGGDGSLTGANLFRKEWSG 142
ILQ+GGT+IGSAR FR REGRLKAA NL + GITNL VIGGDGSLTGA+LFR+EW+
Sbjct: 282 GILQLGGTVIGSARSADFRQREGRLKAAANLVKRGITNLVVIGGDGSLTGADLFRREWAS 461
Query: 143 LLEELARNGDIDNDTVQKYSYLNVVGMVGSIDNDFCGTDMTIGTDSALHRIIEVVDAIMT 202
LL EL G++ D + + +LN+VGMVGSIDNDFCGTDMTIGTDSALHRIIE VDAI T
Sbjct: 462 LLTELKEKGELTGDEMVRCQHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIIEAVDAIST 641
Query: 203 TAQSHQRTFVLEVMGRHCGYLALVSALTCGADWVFLPESPPEEDWEENMCLKLSENRARK 262
TA SHQR FV+EVMGRHCGYLALV+AL C ADWVF+PE PPE DW+ +C KL R
Sbjct: 642 TAISHQRAFVMEVMGRHCGYLALVAALACEADWVFIPEWPPEGDWKTTLCNKLLSERKLG 821
Query: 263 KRLNIIIVSEGAIDMQNKPITSEKIKELVVKNLGFDTRVTILGHVQRGGTPSAFDRILAS 322
+RLNII+V+EGAID + ITS+++K+L+ L +DTRVT+LGHVQRGG+PSAFDRIL S
Sbjct: 822 QRLNIILVAEGAIDREGNSITSDQVKDLLTNELKYDTRVTVLGHVQRGGSPSAFDRILGS 1001
Query: 323 RMGVEAVIALLEATPETPACVVSLRGNQAVRLPLMECVQMTQDVQKAMDERRFKEAVKLR 382
RMG EAV+AL++ATP+TPACVVSL GNQ VR+PLMECV T+DVQKAMD + F+EAV+LR
Sbjct: 1002RMGAEAVLALMDATPDTPACVVSLEGNQTVRVPLMECVSRTKDVQKAMDMKNFEEAVQLR 1181
Query: 383 GRRFEGNLNTYKRLA 397
G+ F+ NL TY+ L+
Sbjct: 1182GKSFQNNLTTYRMLS 1226
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 26/309 (8%)
Frame = +3
Query: 411 NVAVINVGAPAAGMNAAVRSAVRVGIADGHKMFAIYDGFEGFANG--QIKEIGWADVGGW 468
+ V G + GMN AVR+ VR+G G K++ I +G++G +G I+E WA V G
Sbjct: 108 TIGVFTSGGDSQGMNGAVRAVVRMGFYLGCKVYVIREGYQGMVDGGENIEEATWASVSGI 287
Query: 469 TGQGGSILGTKRTLPGKYLE---KIAEQMHSHSINALLIIXXXXXXXXX--------XXX 517
GG+++G+ R+ + E K A + I L++I
Sbjct: 288 LQLGGTVIGSARSADFRQREGRLKAAANLVKRGITNLVVIGGDGSLTGADLFRREWASLL 467
Query: 518 XXXXXKHEAFCVPMVM--------VPATVSNNVPGSDFSIGADTALNTITDTCDRIKQSA 569
K E MV + ++ N+ G+D +IG D+AL+ I + D I +A
Sbjct: 468 TELKEKGELTGDEMVRCQHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIIEAVDAISTTA 647
Query: 570 SGTKRRVFIIETMGGYCGYXXXXXXXXXXXXXXYIFEEPFDIGDLQSNVVH-LTEKMKTS 628
+ +R F++E MG +CGY +I E P + GD ++ + + L + K
Sbjct: 648 I-SHQRAFVMEVMGRHCGYLALVAALACEADWVFIPEWPPE-GDWKTTLCNKLLSERKLG 821
Query: 629 IQRGLVLRNESC----SVNYTTDFIYQLYSEEGKGVFDCRKNVLGHMQQGGAPSPFDRNF 684
+ ++L E + T+D + L + E K +D R VLGH+Q+GG+PS FDR
Sbjct: 822 QRLNIILVAEGAIDREGNSITSDQVKDLLTNELK--YDTRVTVLGHVQRGGSPSAFDRIL 995
Query: 685 GTKISAKAM 693
G+++ A+A+
Sbjct: 996 GSRMGAEAV 1022
>05449
Length = 724
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 164/237 (69%), Positives = 196/237 (82%), Gaps = 5/237 (2%)
Frame = +3
Query: 166 VVGMVGSIDNDFCGTDMTIGTDSALHRIIEVVDAIMTTAQSHQRTFVLEVMGRHCGYLAL 225
+VGMVGSIDNDFCGTDMTIGTDSALHRIIE VDAI TTA SHQR FV+EVMGRHCGYLAL
Sbjct: 3 IVGMVGSIDNDFCGTDMTIGTDSALHRIIEAVDAISTTAISHQRAFVMEVMGRHCGYLAL 182
Query: 226 VSALTCGADWVFLPESPPEEDWEENMCLKLS-----ENRARKKRLNIIIVSEGAIDMQNK 280
V+AL C ADWVF+PE PPE DW+ +C KL + R +RLNII+V+EGAID +
Sbjct: 183 VAALACEADWVFIPEWPPEGDWKTTLCNKLLSSVALQERKLGQRLNIILVAEGAIDREGN 362
Query: 281 PITSEKIKELVVKNLGFDTRVTILGHVQRGGTPSAFDRILASRMGVEAVIALLEATPETP 340
ITS+++K+L+ L +DTRVT+LGHVQRGG+PSAFDRIL SRMG EAV+AL++ATP+TP
Sbjct: 363 SITSDQVKDLLTNELKYDTRVTVLGHVQRGGSPSAFDRILGSRMGAEAVLALMDATPDTP 542
Query: 341 ACVVSLRGNQAVRLPLMECVQMTQDVQKAMDERRFKEAVKLRGRRFEGNLNTYKRLA 397
ACVVSL GNQ VR+PLMECV T+DVQKAMD + F+EAV+LRG+ F+ NL TY+ L+
Sbjct: 543 ACVVSLEGNQTVRVPLMECVSRTKDVQKAMDMKNFEEAVQLRGKSFQNNLTTYRMLS 713
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Frame = +3
Query: 537 TVSNNVPGSDFSIGADTALNTITDTCDRIKQSASGTKRRVFIIETMGGYCGYXXXXXXXX 596
++ N+ G+D +IG D+AL+ I + D I +A + +R F++E MG +CGY
Sbjct: 21 SIDNDFCGTDMTIGTDSALHRIIEAVDAISTTAI-SHQRAFVMEVMGRHCGYLALVAALA 197
Query: 597 XXXXXXYIFEEPFDIGDLQSNV-------VHLTEKMKTSIQRGLVLRNESC----SVNYT 645
+I E P + GD ++ + V L E+ K + ++L E + T
Sbjct: 198 CEADWVFIPEWPPE-GDWKTTLCNKLLSSVALQER-KLGQRLNIILVAEGAIDREGNSIT 371
Query: 646 TDFIYQLYSEEGKGVFDCRKNVLGHMQQGGAPSPFDRNFGTKISAKAM 693
+D + L + E K +D R VLGH+Q+GG+PS FDR G+++ A+A+
Sbjct: 372 SDQVKDLLTNELK--YDTRVTVLGHVQRGGSPSAFDRILGSRMGAEAV 509
>18160
Length = 1010
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 211 FVLEVMGRHCGYLALVSALTCGADWVFLPESPPEEDWEEN--MCLKLSENRARKKRLNII 268
F+L+ M ++C +L+ ++AL F+P P ++ + + + R R + +
Sbjct: 50 FILKFMNKYCAHLSFIAALP------FMPSQPQTGSYQGSAAYIVNMRHTRDRSRSTGLH 211
Query: 269 IVSEGAIDMQNKPI 282
+ +I Q +PI
Sbjct: 212 VSPSHSILTQGQPI 253
>25936
Length = 459
Score = 29.3 bits (64), Expect = 6.1, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 459 EIGWADVGGWTGQGGSILGTKRTLPGKYLE 488
E+GW+DVGG G S++ T + P KY E
Sbjct: 329 ELGWSDVGGLEGVKSSLIETLQ-WPSKYPE 415
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|176865892|ref|NP_038534.2| eukaryotic translation
initiation factor 4A2 isoform a [Mus musculus]
(407 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01062 542 e-154
09316 232 3e-61
19640 145 3e-47
00621 181 5e-46
07310 167 6e-42
02498 124 8e-29
09327 119 2e-27
00739 117 1e-26
02054 81 1e-26
01517 116 2e-26
04883 101 6e-22
00162 101 7e-22
31899 94 7e-20
11160 75 1e-17
22006 87 1e-17
14337 85 6e-17
19525 83 2e-16
08036 61 1e-14
34295 73 3e-13
00617 70 1e-12
33025 62 4e-10
19172 61 6e-10
30136 59 4e-09
17708 59 5e-09
12995 58 9e-09
17544 54 2e-07
10649 53 3e-07
19151 52 6e-07
11624 49 4e-06
39583 46 2e-05
31781 43 3e-04
12121 37 0.021
31220 34 0.082
14329 34 0.11
33083 32 0.49
10351 31 0.94
06438 31 1.0
>01062
Length = 2138
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 259/378 (68%), Positives = 313/378 (82%)
Frame = -3
Query: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
E+ FD+M ++E LLRGIYAYGFEKPSAIQQRA+ P +KG DVIAQAQSGTGKTATF+I
Sbjct: 2088 EVTPTFDNMGIREELLRGIYAYGFEKPSAIQQRAVKPIVKGRDVIAQAQSGTGKTATFSI 1909
Query: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
S+LQ L+I+ +ETQAL+L+PTRELA QIQKV+LALGDYM CH+CIGGTN+ +++KL
Sbjct: 1908 SVLQCLDIQLRETQALILSPTRELATQIQKVMLALGDYMNVQCHSCIGGTNIGEDIRKLD 1729
Query: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
HIV GTPGRVFDM+ RR L + IKM +LDEADEML++GFK+QIY++++ L + Q
Sbjct: 1728 Y-GQHIVSGTPGRVFDMIKRRNLRTRSIKMMILDEADEMLNKGFKEQIYDVYRYLPPATQ 1552
Query: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
V+L+SAT+P ++LE+T KFM DPIRILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 1551 VILISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 1372
Query: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 329
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKER+ IM+ FR+G SRVLIT
Sbjct: 1371 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKEREAIMKVFRAGDSRVLIT 1192
Query: 330 TDLLARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINFVTEEDKRILRDIE 389
TD+ ARGIDVQQVSLVINYDLP NRE YIH VAINFV +D RILRDIE
Sbjct: 1191 TDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDIE 1012
Query: 390 TFYNTTVEEMPMNVADLI 407
+Y+T ++EMPMNVADLI
Sbjct: 1011 QYYSTQIDEMPMNVADLI 958
>09316
Length = 2312
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 208/370 (56%), Gaps = 4/370 (1%)
Frame = +2
Query: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
F D LK LLR I GFE PS +Q I I DV+ QA+SG GKTA F ++ LQQ
Sbjct: 851 FRDFLLKPELLRAIIDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQ 1030
Query: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHAC-IGGTNVRNEMQKLQAEAP 153
LE + LV+A TRELA QI K YM A GG +V+ + + L P
Sbjct: 1031 LEPVDGQVSVLVMAHTRELAFQISKEYERFSKYMNNVKIAVFFGGMSVKKDEEVLSKNCP 1210
Query: 154 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR-GFKDQIYEIFQKLNTSIQVVL 212
HIVVGTPGR+ + L+ K IK F+LDE D+ML+ + + EIF+ QV++
Sbjct: 1211 HIVVGTPGRLHALAKANNLNLKKIKHFILDECDKMLADLDMRRDVQEIFRLTPHEKQVMM 1390
Query: 213 LSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
SAT+ ++ + KKFM+DP+ + V + +LTL G++Q Y ++ E K L +L + L
Sbjct: 1391 FSATLSKEIRPICKKFMQDPMEVYVDDDSKLTLHGLQQHYCKLKDNE-KNRKLFELLDVL 1567
Query: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Q +IF+ + + L++ + ++F A+H M Q+ER ++F+ R+L+ T+
Sbjct: 1568 EFNQVIIFVKSVPRCMALSQLLLEQNFPAIAIHRQMTQEERLSRYQQFKDFQKRILVATN 1747
Query: 332 LLARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINFVTEE-DKRILRDIET 390
L RG+D+++V++V NYD+P + + Y+H +AI FV++E D +IL D++
Sbjct: 1748 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQE 1927
Query: 391 FYNTTVEEMP 400
+ + E+P
Sbjct: 1928 RFEVNITELP 1957
>19640
Length = 456
Score = 145 bits (365), Expect(2) = 3e-47, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 78/82 (95%)
Frame = -1
Query: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
IF NTRRKVD LT++M + +FTVSA+HGDM+Q++R+VIM++FRSGSSRVLITTDLLARGI
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 338 DVQQVSLVINYDLPTNRENYIH 359
DVQQVSLVINYDLP+NRENYIH
Sbjct: 276 DVQQVSLVINYDLPSNRENYIH 211
Score = 61.2 bits (147), Expect(2) = 3e-47, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 34/36 (94%)
Frame = -3
Query: 372 VAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
VAINF+T++D+RIL+DIE FY+TT+EEMP N+ADLI
Sbjct: 175 VAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 68
>00621
Length = 2263
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 203/407 (49%), Gaps = 36/407 (8%)
Frame = +1
Query: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL-- 92
+ + +L ++ I G+++P+ IQ +AI ++ D+I A++G+GKTA F I +L
Sbjct: 259 WKESDLGADIMEVIDRVGYKEPTPIQMQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVW 438
Query: 93 -------QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEM 145
++LE + A++LAPTRELAQQI++ G+ +G + IGG + +
Sbjct: 439 IQSLPKIERLEDADQGPYAVILAPTRELAQQIEEETRKFGEGLGIRVVSVIGGISREEQG 618
Query: 146 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLN 205
KLQ + +V+ TPGR+ D+L RYL V+DEAD M++ GF+ ++ +I L
Sbjct: 619 FKLQ-QGCEVVIATPGRMIDVLENRYLVLNQCTYVVMDEADRMINMGFEPEVRKILDYLP 795
Query: 206 TS-------------------------IQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE 240
S Q V+ +ATMP V + + F+R P + +
Sbjct: 796 VSNQKPDNDDAEDDLKMLQNFKSKHKYRQTVMFTATMPPQVERLARTFLRRPTVVYIGNV 975
Query: 241 ELTLEGIKQF-YINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFT 299
+E ++Q Y+ E E+ K L ++ +IF+N ++ D L + + F
Sbjct: 976 GKPVERVEQIVYMLTESEKRK--KLIEVLNAGVDPPIIIFVNQKKGADVLAKSLEKMGFN 1149
Query: 300 VSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 359
+ LHG Q++R+ + + G+ +++ TD+ RGID++ VSLV+NYD+ E+Y H
Sbjct: 1150ATTLHGGKGQEQREYALASLKGGAKDIMVATDVAGRGIDIKDVSLVLNYDMARTIEDYTH 1329
Query: 360 XXXXXXXXXXXXVAINFVTEEDKRILRDIETF-YNTTVEEMPMNVAD 405
+I F+T+ED + D++ ++ V P +A+
Sbjct: 1330RIGRTGRAGKEGTSITFLTKEDSMVFYDLKQLMLSSPVSTCPPELAN 1470
>07310
Length = 712
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 141/239 (58%)
Frame = +2
Query: 162 RVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDV 221
R+ D++N+R + P + VLDEAD++LS+ FK + I L Q++L SAT P V
Sbjct: 2 RILDLMNKRLVKPDTCGILVLDEADKLLSQDFKGMLDNIIAHLPPQRQILLYSATFPLSV 181
Query: 222 LEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLN 281
+ KK++++P I + EELTL+G+ Q+Y V+ E+ K+ L L+ L I Q++IF N
Sbjct: 182 EQFMKKYLKNPYEINLM-EELTLKGVTQYYAFVQ-EKQKVHCLNTLFSKLQINQSIIFCN 355
Query: 282 TRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQ 341
+ ++V+ L +K+ ++ +H M+Q+ R+ + +FR G R L+ +DL RGID+Q
Sbjct: 356 STQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQA 535
Query: 342 VSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINFVTEEDKRILRDIETFYNTTVEEMP 400
V++VIN+D P + E Y+H VAIN +T ED+ L IE T ++ +P
Sbjct: 536 VNVVINFDFPKHAETYLHRIGRSGRYGHLGVAINLITFEDRFSLHKIEQELGTEIKPIP 712
>02498
Length = 1955
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 7/189 (3%)
Frame = +3
Query: 218 PTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
P+ + +DP+ I +K+EE +L+ IKQ+YI+ +E K LC++Y ++++ Q++
Sbjct: 693 PSGDAVCSAHHPQDPVIISLKREEESLDNIKQYYIDCNSQEEKYVALCNIYGSISVGQSM 872
Query: 278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
IF + R WL E+M A V L G++ ++R I++ FR G +VLITT++ ARGI
Sbjct: 873 IFCHKRSTAAWLAERMTADHHAVGLLTGELTIEQRAAIIKRFREGKEKVLITTNVSARGI 1052
Query: 338 DVQQVSLVINYDLPTNR------ENYIHXXXXXXXXXXXXVAINFV-TEEDKRILRDIET 390
DV+ V++V+N+DLP + E Y+H +AIN V I+R IE
Sbjct: 1053DVEMVTVVVNFDLPVTQDWRPDCETYLHRIGRTGRFGKNGIAINMVDNSRSMAIMRSIEK 1232
Query: 391 FYNTTVEEM 399
+ +E++
Sbjct: 1233HFGRKIEKL 1259
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 128/217 (58%), Gaps = 6/217 (2%)
Frame = +1
Query: 19 DPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRA--IIPCIKGYDVIAQ 76
DP+ + S V +F+ +NLK LL+G+Y GF PS IQ+ A I+ ++IAQ
Sbjct: 106 DPNSPLYS-----VKSFEALNLKPQLLKGVYDMGFNAPSKIQETALPILLADPPVNMIAQ 270
Query: 77 AQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHAC 135
+QSGTGKTA F +++L +++I Q L LAPT ELA QI +VI + +M G
Sbjct: 271 SQSGTGKTAAFVLTMLSRVDISQTFPQCLCLAPTYELALQIGEVIEKMSKHMTGLEIRYA 450
Query: 136 IGGTNV-RNEMQKLQAEAPHIVVGTPGRVFDMLNR-RYLSPKWIKMFVLDEADEMLS-RG 192
+ G V R E+ Q IV+GTPG V D +R + L + +++FVLDEAD M+S +G
Sbjct: 451 VRGERVNRGEVLSEQ-----IVIGTPGTVMDWSHRFKALPLEKLRVFVLDEADVMISMQG 615
Query: 193 FKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFM 229
+DQ I ++L++ Q++L SAT V++ ++ +
Sbjct: 616 HQDQSTRIQKRLSSGCQMLLFSATYDQVVMQFAQRII 726
>09327
Length = 1087
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 126/236 (53%), Gaps = 4/236 (1%)
Frame = +2
Query: 106 VLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFD 165
+L PTRELAQQ+Q+V + G GG ++++L A I + TPGR+ D
Sbjct: 20 LLVPTRELAQQVQEVAVEFGHSSRVRSVCVYGGAQRGPQLRELDRGA-EICIATPGRLID 196
Query: 166 MLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVT 225
L + + VLDEAD ML GF+ QI +I +++ Q ++ SAT P +V ++
Sbjct: 197 FLESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRKLA 376
Query: 226 KKFMRDPIRILVKKEELTLEG----IKQFYINVEREEWKLDTLCDLYETLTITQAVIFLN 281
+ F+ + +I + +LT I ++ E+EE KL L + + +IF+
Sbjct: 377 EDFIMEYTQINIGALQLTANHNILQIIDVCMDHEKEE-KLVKLLNEIMQEKENRTLIFVE 553
Query: 282 TRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
T+RK D + +M + V +HGD Q+ERD ++ +FR+G VL+ TD+ +RG+
Sbjct: 554 TKRKCDDIHRRMKRDGWPVLCIHGDKSQQERDWVLNDFRNGRCPVLLATDVASRGL 721
>00739
Length = 1313
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 131/256 (51%), Gaps = 4/256 (1%)
Frame = +3
Query: 150 AEAPHIVVGTPGRVFDMLNR-RYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSI 208
A PHIV+ TPGR+ D ++ S K +K V+DEAD +L F Q+ I +L ++
Sbjct: 33 AVKPHIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDDNFGAQLEPILTRLPSAR 212
Query: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVE---REEWKLDTLC 265
Q +L SAT+ V + + P + + E T++ +++ Y+ V ++ + + L
Sbjct: 213 QTLLFSATLSPTVNALRDSVLNKPFVWIQQSERATVDELQEDYVLVPASMKDAYMVHILD 392
Query: 266 DLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
+ + +IF T + L + F+ + LH + Q+ R + F+S +R
Sbjct: 393 HWLKDHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFRLSSLSRFKSNQTR 572
Query: 326 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINFVTEEDKRIL 385
+LI+TD+ +RG+D+ V L+IN+++P +Y+H +I+ VTE D +++
Sbjct: 573 ILISTDVASRGLDIPTVDLIINHNIPNRPRDYVHRVGRTARAGRCGQSISLVTEFDIKLI 752
Query: 386 RDIETFYNTTVEEMPM 401
+ IE+ N + E P+
Sbjct: 753 KSIESHINCQMTEHPV 800
>02054
Length = 1110
Score = 81.3 bits (199), Expect(2) = 1e-26, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%)
Frame = -3
Query: 229 MRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDW 288
+RDP+++ V + T++ ++Q Y+ + ++K L + L ++F +T
Sbjct: 769 LRDPVKVEVSNKYQTVDTLQQSYLFIP-AKYKDAYLVSILNELAGNSFMVFCSTCANTQR 593
Query: 289 LTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINY 348
+ + FT LHG M Q +R + +F+S +LI TD+ +RG+D+ V +V+N
Sbjct: 592 VALLLRNLGFTAIPLHGQMSQAKRLGSLNKFKSKDRSILIATDVASRGLDIPHVDVVLNL 413
Query: 349 DLPTNRENYIHXXXXXXXXXXXXVAINFVTEEDKRILRDIETFYNTTVEEMP 400
D+PT+ ++Y+H AI FV++ D + + IE + E P
Sbjct: 412 DIPTHSKDYMHRVGRTARAGRSGRAITFVSQYDVELYQRIEHLIGKKLSEYP 257
Score = 56.6 bits (135), Expect(2) = 1e-26, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -2
Query: 150 AEAPHIVVGTPGRVFDML-NRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSI 208
+ PHI++ TPGR+ D L N + S + +K V+DEAD +L F+D++ +I + +
Sbjct: 1010 GKKPHIIIATPGRLVDHLENTKGFSLRALKFLVMDEADRILDMNFQDEVDKILKVIPRER 831
Query: 209 QVVLLSATMPTDVLEVTKKFMRDP 232
L SATM V + T P
Sbjct: 830 NTYLFSATMTNKVAKTTASITEGP 759
>01517
Length = 2605
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 11/247 (4%)
Frame = +2
Query: 165 DMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQK----LNTSIQVVLLSATMPTD 220
DM+ R + VLDEAD ML GF+ QI I +K Q ++ SAT P +
Sbjct: 5 DMMERGKIGMDHCNYLVLDEADRMLDMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPKE 184
Query: 221 VLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY-------ETLTI 273
+ + + F+ + I + V + T E I Q + VE E K L DL E+LT+
Sbjct: 185 IQLLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEPE-KRSFLLDLLMASGTGPESLTL 361
Query: 274 TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLL 333
+F+ T++ D L + + ++ +++HGD Q+ER+ +R F++G +L+ T +
Sbjct: 362 ----VFVETKKGADSLEQFLMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVA 529
Query: 334 ARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINFVTEEDKRILRDIETFYN 393
ARG+D+ V VIN+DLP++ E Y+H +A +F ++++ I RD+
Sbjct: 530 ARGLDIPNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNIARDMLDLLT 709
Query: 394 TTVEEMP 400
+E+P
Sbjct: 710 EANQEVP 730
>04883
Length = 1155
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Frame = +3
Query: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFA----IS 90
F ++N + ++ + + P+ IQ ++ + G D++ AQ+G+GKT F +
Sbjct: 366 FTEVNFPDYVMNQVRRNSWTAPTPIQSQSWPVAMAGKDLVGIAQTGSGKTLAFMLPAIVH 545
Query: 91 ILQQLEIEFKETQ-ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
I Q +E + L L PTRELAQQ+Q+V G GG +++ L+
Sbjct: 546 INHQAYLERGDGPIVLALVPTRELAQQVQEVAQEFGHASRVRSVCVYGGAPRGPQLRDLE 725
Query: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
A I + TPGR+ D L + + VLDEAD ML GF+ QI +I +++ Q
Sbjct: 726 RGA-EICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 902
Query: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDL 267
++ SAT P +V ++ + F+ + +++ + ELT I+V E K D L L
Sbjct: 903 TLMWSATWPKEVRKLAEDFIDEYVQVNIGALELTANHNILQIIDVCMEHEKEDKLVKL 1076
>00162
Length = 2322
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 5/262 (1%)
Frame = +3
Query: 103 QALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGR 162
+AL++ PTRELA QI +V+ + + + + IGG + E + +IV+ T GR
Sbjct: 141 EALIITPTRELAFQIYEVLNKIRTFHDFSANLVIGGKFMWRETHLMGKT--NIVICTVGR 314
Query: 163 VFDML-NRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDV 221
+ L + + +K+ VLDEAD ++ F + I L Q +L SAT V
Sbjct: 315 LLHHLESTQAFDVSELKVLVLDEADRIMDSKFAQDMDSIMSHLPPR-QTLLFSATQTMSV 491
Query: 222 LEVTKKFMRDPIRILVKK--EELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIF 279
+ + ++DP + V + E +T G++Q YI E E KL L + + ++F
Sbjct: 492 KTLARLSLKDPSYVSVDRHAEYVTPTGLEQSYIVCELHE-KLSLLYSFLKNHPNNKIMVF 668
Query: 280 LNTRRKVDWLTE--KMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 337
L T ++ ++ K +V LHG + Q R I REF +LITTDL RG+
Sbjct: 669 LQTCKQARYVHTVIKRERPGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGL 848
Query: 338 DVQQVSLVINYDLPTNRENYIH 359
D V+ VI D P + YIH
Sbjct: 849 DFPAVNWVIQLDCPVDVNTYIH 914
>31899
Length = 453
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Frame = -1
Query: 29 NEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFA 88
+E VD F + L + +L G+ GFE+PS IQ +AI G D+I QA+SGTGKT F+
Sbjct: 354 SESVD-FASLLLSKPVLNGLKNAGFERPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFS 178
Query: 89 ISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNE 144
+ L+ +E + TQ LVLAPTRE+A QI +VI ++G M G CH IGG V +
Sbjct: 177 VVALEGIETTARSTQVLVLAPTREIALQIWEVINSIGSAMSGLQCHTFIGGLPVHED 7
>11160
Length = 646
Score = 75.1 bits (183), Expect(2) = 1e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 15/189 (7%)
Frame = -1
Query: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRR------YLSPKWIKMFVLDEADEMLS 190
GG + +++ K I++ TPGR+ D+ +R+ S K +++ VLDEAD +L
Sbjct: 646 GGVSCSHDISKFMKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLLD 467
Query: 191 RGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEG---- 246
GF+ I I L + L SAT +V + + +R+P+R+ VK+++L E
Sbjct: 466 MGFEASINTILGHLPKLRRTGLFSATQTDEVENLIRAGLRNPLRVTVKEKKLAGEADQRT 287
Query: 247 ---IKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA--RDFTVS 301
+ +Y+ VE EE K L +T + ++F +T VD+ + + + V
Sbjct: 286 PSTLSNYYMIVEAEE-KFSQLVKFLKTHHRDKLLLFFSTCACVDYFSMCLTQLLKHMQVL 110
Query: 302 ALHGDMDQK 310
++H M QK
Sbjct: 109 SIHSKMKQK 83
Score = 32.7 bits (73), Expect(2) = 1e-17, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -3
Query: 308 DQKERDVIMREFRSGSSRVLITTDLLARGID 338
D+ E + +FRS +S +L+ TD++ARG+D
Sbjct: 95 DEAEEKPVFAKFRSITSGLLVCTDVMARGVD 3
>22006
Length = 3414
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Frame = +2
Query: 56 PSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIE-FKETQALVLAPTRELA 114
P+ IQ++ I ++G D++A A++G+GKTA F + +L++L++ K +AL+L+PTRELA
Sbjct: 3005 PTPIQRKTIPVIMEGKDMVAMARTGSGKTAAFLVPMLERLKMHSSKGARALILSPTRELA 3184
Query: 115 QQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSP 174
Q K LG ++ +GG + ++ L + P I++ TPGR+ +L S
Sbjct: 3185 LQTLKFTKELGKFLDLRAAVILGGDRMEDQFSALH-QNPDIIIATPGRLLHVLVEMKKSL 3361
Query: 175 KWIKMFVLDEADEML 189
K + V DEAD +
Sbjct: 3362 KEVIYVVFDEADRLF 3406
>14337
Length = 693
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%)
Frame = +2
Query: 257 EEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIM 316
E KL + +L+ ++F+ ++++ L + V A+H D Q ERD +
Sbjct: 8 EAGKLMAMRNLFTEGITPPVLVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDATV 187
Query: 317 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINF 376
R F G VL+ T+L+ RGID + ++LVINYD PTN +YIH AI F
Sbjct: 188 RAFTEGRVWVLVCTELMGRGIDFKGINLVINYDFPTNAVSYIHRIGRTGRAGVPGRAITF 367
Query: 377 VTEEDKRILRDIETFYNTTVEEMP 400
TE+D LR I E+P
Sbjct: 368 FTEQDVTHLRSIANIIKEAGCEVP 439
>19525
Length = 585
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Frame = +2
Query: 98 EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
E T+ LVL PTRELA Q+ +V + Y + GG +++ + L+ P IVV
Sbjct: 2 ERATTRVLVLVPTRELAVQVYQVGQQISQYTKISICLAAGGLDIKGQEAALRL-CPDIVV 178
Query: 158 GTPGRVFDML-NRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSAT 216
TPGR+ D L N + +++ VLDEAD ML F Q+ EI + N Q +L SAT
Sbjct: 179 ATPGRLIDHLHNAPNFTIAHVEILVLDEADRMLDEYFAAQMTEIIRMCNFQRQTMLFSAT 358
Query: 217 MPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINV-EREEWKLDTLCDLYETLTIT- 274
M V ++ +++ +++ V + G++Q ++ + E +E + + + T
Sbjct: 359 MSDAVQDLASVSLKEAVKVFVNQNTDIALGLQQEFVRIRENKEGDREAIVSSLVSRTFCD 538
Query: 275 QAVIFLNTR 283
+ ++FL T+
Sbjct: 539 KCMVFLQTK 565
>08036
Length = 1226
Score = 61.2 bits (147), Expect(2) = 1e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
Frame = +1
Query: 156 VVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSA 215
VVGTP R+ L +L ++M V+DEAD + S G + + ++ ++L Q L+SA
Sbjct: 1 VVGTPSRILAHLRAGHLELHTVQMLVVDEADLVFSFGHEADMKKLMEELPRIYQAFLMSA 180
Query: 216 TMPTDVLEVTKKFMRDPIRILVKKEELTLEG-IKQFYINVEREEWKLDTLCDLYETLTIT 274
T+ DV + K + +P+ + +K+ +L + Q+++ E ++ + L L
Sbjct: 181 TLSEDVKALKKMVLHNPVILKLKESQLPESTQLTQYHVKCEVDDKFTLMVAVLKLGLVRG 360
Query: 275 QAVIFLNTRRKVDWLTE-KMHARDFTVSA--LHGDMDQKERDVIMREFRSGSSRVLITTD 331
++++F+N+ VD + K+ F + A L+ ++ K R I+ +F G ++I +D
Sbjct: 361 KSILFVNS---VDSCYKLKLFLEPFGIPACVLNSELPVKSRCHIVSQFNEGLYDIIIASD 531
Score = 36.6 bits (83), Expect(2) = 1e-14, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 333 LARGIDVQQVSLVINYDLPTNRENYIH 359
+ARGID Q VS VIN++ P + YIH
Sbjct: 609 VARGIDFQNVSNVINFEFPKTVDAYIH 689
>34295
Length = 694
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = -1
Query: 273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDL 332
I +IF NT++ L+ + + LHG M QKER + F+S R LI TD+
Sbjct: 544 IPNVMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLIATDV 365
Query: 333 LARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAIN-FVTEEDKRILRDIETF 391
ARG+D+ V LVIN+ LP + YIH VAI+ F D +L IE
Sbjct: 364 AARGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGVAISIFRFPRDLELLGAIEEE 185
Query: 392 YNTTVEEMPMN 402
NT + E P++
Sbjct: 184 INTKLTEHPID 152
>00617
Length = 1505
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 63/110 (57%)
Frame = -3
Query: 298 FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 357
F+ + LH + Q+ R + F+S +R+LI+TD+ +RG+D+ V L+IN+++P +Y
Sbjct: 1482 FSCAVLHSMIPQRFRLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDY 1303
Query: 358 IHXXXXXXXXXXXXVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
+H +I+ VTE D ++++ IE+ N + E P+ +++
Sbjct: 1302 VHRVGRTARAGRCGQSISLVTEFDIKLIKSIESHINCQMTEHPVKEKEVL 1153
>33025
Length = 558
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +3
Query: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQ 196
G T+ R + ++ A ++VVGTPGR+ D + + +S + +LDEAD ML GF+ +
Sbjct: 63 GATDRRYQKSRIMKGA-NLVVGTPGRLLDFIGDQTISLGKCQYLILDEADRMLDMGFEPE 239
Query: 197 IYEIFQKLN----TSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYI 252
I ++ T Q ++ SAT D+ + F+ D + I V + Q ++
Sbjct: 240 IRKLVDTHGMPPKTQRQTLMFSATFKEDIQRLAGDFLNDYLFITVGIVGGACSDVTQTFL 419
Query: 253 NVEREEWKLDTLCDLYETLTITQAV 277
V+R + K D LC++ + ++V
Sbjct: 420 EVDRLQ-KRDHLCEILNEMGTAKSV 491
>19172
Length = 484
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -1
Query: 274 TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLL 333
T+ +IF+ T+++VD +T + + + A+HGD Q+ERD ++ FR+G +L+ TD+
Sbjct: 334 TKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVA 155
Query: 334 ARGI 337
ARG+
Sbjct: 154 ARGL 143
>30136
Length = 524
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Frame = +2
Query: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFA--- 88
+ +F + L + +++ I G++ P+ IQ + + G + + A++G+GKT +
Sbjct: 128 IQDFAEAYLPDYVIKEIRRQGYKSPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYILPA 307
Query: 89 -ISILQQLEIEFKETQ-ALVLAPTRELAQQIQKVILALG--DYMGATCHACIGGTNVRNE 144
+ I Q ++ E ALVLAPTRELAQQIQ+V G Y+ TC GG +
Sbjct: 308 IVHINNQQPLQRGEGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTC--VFGGAPKGGQ 481
Query: 145 MQKLQ 149
M+ LQ
Sbjct: 482 MRDLQ 496
>17708
Length = 882
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Frame = +1
Query: 72 DVIAQAQSGTGKTATF---AISILQQLEIEFKE-TQALVLAPTRELAQQIQKVILALGDY 127
D++ A++G+GKT F AI ++ +L+ + T ++++PTREL+ Q V+ L Y
Sbjct: 556 DLMGAAKTGSGKTLAFLIPAIELMYKLKFMPRNGTGCIIISPTRELSMQTFNVLTELLKY 735
Query: 128 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDML 167
T +GG N +E++KL+ + +I+V TPGR+ D L
Sbjct: 736 HHHTFGLIMGGVNRHDEVKKLK-KGVNIIVATPGRLLDHL 852
>12995
Length = 1072
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%)
Frame = +3
Query: 277 VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 336
V+F+ T+ V++L + + ++ +DQ R + + +F +V++ TDL ARG
Sbjct: 141 VVFVATKHHVEYLNTLLTKCGIACTYIYSSLDQTARKIHVAKFTHKQVKVMLVTDLAARG 320
Query: 337 IDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINFVTEEDKRILRDIETFYNTTV 396
ID+ Q+ V+N+ P + ++H A + V ++ L D+ F +
Sbjct: 321 IDIPQLDNVVNFHFPAKAKLFVHRVGRVARAGRSGTAYSLVAMDEVAHLVDLHVFLGRPL 500
Query: 397 EEMPMN 402
+ P +
Sbjct: 501 KTAPQS 518
>17544
Length = 1047
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 17/103 (16%)
Frame = +2
Query: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISI 91
+++F++ L E + I + KP+ +Q+ A+ + D++A AQ+G+GKTA F + I
Sbjct: 629 INSFEECTLGEIIRNNIVLSKYNKPTPVQKFALPIVLGKRDLMACAQTGSGKTAAFLLPI 808
Query: 92 LQQL------EIEFKETQ-----------ALVLAPTRELAQQI 117
L Q+ ++ Q AL+LAPTRELA QI
Sbjct: 809 LNQVYENGPTPEALQQNQSRGYRRKMYPIALILAPTRELASQI 937
>10649
Length = 472
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = +1
Query: 290 TEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 349
+++ A +V LHG + Q R I REF +LITTDL RG+D V+ VI D
Sbjct: 43 SDQARAAGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLD 222
Query: 350 LPTNRENYIH 359
P + YIH
Sbjct: 223 CPVDVNTYIH 252
>19151
Length = 625
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Frame = -3
Query: 325 RVLITTDLLARGIDVQQVSLVINYDLP------TNRENYIHXXXXXXXXXXXXVAINFV- 377
+VLITT++L+RGID++QV++V+N+DLP + E Y+H +AIN +
Sbjct: 623 KVLITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIAINLID 444
Query: 378 TEEDKRILRDIETFYNTTVEEMPMNVAD 405
E+ + R IE + + + + AD
Sbjct: 443 GEKSMNVCRAIEKHFQKDIVYLNTDNAD 360
>11624
Length = 2257
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Frame = -1
Query: 243 TLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSA 302
T EG+ ++ + + E L L L+ L + F N+ E H R +
Sbjct: 991 TPEGLTEYIVESDSSEKPLLVLHFLH-NLKFRSVLCFTNS-------VETTH-RLCLLVK 839
Query: 303 LHGDMDQKE---------RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 353
L+G + KE R I+++F G +L+ +D +ARG+DV V VI+YD P
Sbjct: 838 LYGGLSVKEFSSRLPGERRKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNPPY 659
Query: 354 RENYIHXXXXXXXXXXXXVAINFVTEED 381
+ YIH AI+ + +++
Sbjct: 658 IKTYIHRVGRTARAGRAGTAISLLEKKE 575
>39583
Length = 234
Score = 46.2 bits (108), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = -3
Query: 316 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 359
++ F+ G VL+ TDL +RG+D++ V VIN+ +P+ ++Y+H
Sbjct: 160 LKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTLKHYVH 29
>31781
Length = 416
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Frame = -2
Query: 231 DPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFL 280
+P+ I +++EE +L+ I+Q+YI K LC++Y ++++ Q++IF
Sbjct: 277 NPVTIRLRREEESLDNIQQYYIRCRTLSDKYRALCNIYGSISVGQSMIFC 128
>12121
Length = 465
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 155 IVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGF 193
I + TPGR+ D L + + VLDEAD ML GF
Sbjct: 463 ICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGF 347
>31220
Length = 818
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +2
Query: 334 ARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINFVTEEDKRILRDIETFYN 393
+RGID Q V+ VIN+D P + +YIH ++FV
Sbjct: 164 SRGIDFQGVNNVINFDFPLDVTSYIHRAGRTARGNNTGSVLSFV---------------- 295
Query: 394 TTVEEMPMNVA 404
+V+E+P+N A
Sbjct: 296 -SVKELPINQA 325
>14329
Length = 819
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = -3
Query: 65 IPCIKGYDVIAQAQS--GTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVIL 122
IP G+ V S G G+T + +Q + ET L L Q+ Q V L
Sbjct: 274 IPAAAGFGVFVTFMSRLGRGRTWPLYLFFVQGYDGRGXET-CLHLCHLYLWTQESQNVCL 98
Query: 123 AL--GDYMGATCHACIGGTNVRNEMQKL 148
L GD++ TCH+ GG V EM KL
Sbjct: 97 LLS*GDWLTTTCHSDCGGGTVW-EMLKL 17
>33083
Length = 1931
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 335 RGIDVQQVSLVINYDLPTNRENYIH 359
RG+D+ QV ++ YD P + YIH
Sbjct: 1 RGLDIPQVDWIVQYDPPDESKEYIH 75
>10351
Length = 575
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 23 VIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQ 60
V + +W+ D FDD NL LRG+Y YG AI+
Sbjct: 74 VKKVHWDCAWDTFDDSNL----LRGVYEYGMGSWEAIR 175
>06438
Length = 989
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 328 ITTDLLARGIDVQQVSLVINYDLPTNRENYIH 359
+T L RG+D V+ VI D P + YIH
Sbjct: 25 LTVTLACRGLDFPAVNWVIQLDCPVDVNTYIH 120
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|21450625|ref|NP_659207.1| eukaryotic translation
initiation factor 4A1 [Mus musculus]
(406 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01062 538 e-153
09316 224 6e-59
19640 146 4e-46
00621 177 9e-45
07310 172 2e-43
02498 125 4e-29
09327 122 3e-28
00739 115 2e-26
01517 114 8e-26
02054 77 1e-25
04883 104 7e-23
00162 101 5e-22
31899 98 7e-21
11160 75 9e-18
22006 87 2e-17
19525 86 3e-17
14337 84 1e-16
08036 60 7e-15
34295 70 1e-12
00617 69 3e-12
33025 63 2e-10
19172 62 4e-10
12995 60 1e-09
17708 58 7e-09
17544 57 1e-08
30136 56 2e-08
10649 52 4e-07
19151 52 4e-07
11624 49 3e-06
39583 46 2e-05
31781 42 4e-04
12121 36 0.028
31220 34 0.11
33083 32 0.44
10351 32 0.45
06438 31 0.84
>01062
Length = 2138
Score = 538 bits (1387), Expect = e-153, Method: Compositional matrix adjust.
Identities = 255/378 (67%), Positives = 310/378 (82%)
Frame = -3
Query: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
E+ +FD+M + E LLRGIYAYGFEKPSAIQQRA+ P +KG DVIAQAQSGTGKTATF+I
Sbjct: 2088 EVTPTFDNMGIREELLRGIYAYGFEKPSAIQQRAVKPIVKGRDVIAQAQSGTGKTATFSI 1909
Query: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
S+LQ +++ L+ TQAL+L+PTRELA QIQKV++ALGDYM CH+CIGGTN+ +++KL
Sbjct: 1908 SVLQCLDIQLRETQALILSPTRELATQIQKVMLALGDYMNVQCHSCIGGTNIGEDIRKLD 1729
Query: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
HI+ GTPGRVFDM+ RR L + IKM +LDEADEML++GFK+QIYD+++ L TQ
Sbjct: 1728 Y-GQHIVSGTPGRVFDMIKRRNLRTRSIKMMILDEADEMLNKGFKEQIYDVYRYLPPATQ 1552
Query: 209 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268
V+L+SAT+P ++LE+T KFM DPIRILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 1551 VILISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 1372
Query: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKER+ IM+ FR+G SRVLIT
Sbjct: 1371 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKEREAIMKVFRAGDSRVLIT 1192
Query: 329 TDLLARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINMVTEEDKRTLRDIE 388
TD+ ARGIDVQQVSLVINYDLP NRE YIH VAIN V +D R LRDIE
Sbjct: 1191 TDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDIE 1012
Query: 389 TFYNTSIEEMPLNVADLI 406
+Y+T I+EMP+NVADLI
Sbjct: 1011 QYYSTQIDEMPMNVADLI 958
>09316
Length = 2312
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 215/401 (53%), Gaps = 9/401 (2%)
Frame = +2
Query: 8 RSRDNGPDGMEPEGV----IESNWNEIVDS-FDDMNLSESLLRGIYAYGFEKPSAIQQRA 62
R + DG EG ++ + I S F D L LLR I GFE PS +Q
Sbjct: 758 RRNETAVDGAGGEGQAKKDVKGTYVSIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQHEC 937
Query: 63 ILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122
I I DV+ QA+SG GKTA F ++ LQQ+E LV+A TRELA QI K
Sbjct: 938 IPQAILSMDVLCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMAHTRELAFQISKEYER 1117
Query: 123 LGDYMG-ASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVL 181
YM GG +V+ + + L PHI+VGTPGR+ + L+ K IK F+L
Sbjct: 1118 FSKYMNNVKIAVFFGGMSVKKDEEVLSKNCPHIVVGTPGRLHALAKANNLNLKKIKHFIL 1297
Query: 182 DEADEMLSR-GFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE- 239
DE D+ML+ + + +IF+ QV++ SAT+ ++ + KKFM+DP+ + V +
Sbjct: 1298 DECDKMLADLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPICKKFMQDPMEVYVDDDS 1477
Query: 240 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV 299
+LTL G++Q Y ++ E K L +L + L Q +IF+ + + L++ + ++F
Sbjct: 1478 KLTLHGLQQHYCKLKDNE-KNRKLFELLDVLEFNQVIIFVKSVPRCMALSQLLLEQNFPA 1654
Query: 300 SAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHX 359
A+H M Q+ER ++F+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 1655 IAIHRQMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 1834
Query: 360 XXXXXXXXXXXVAINMVTEE-DKRTLRDIETFYNTSIEEMP 399
+AI V++E D + L D++ + +I E+P
Sbjct: 1835 VARAGRFGTKGLAITFVSDENDAKILNDVQERFEVNITELP 1957
>19640
Length = 456
Score = 146 bits (369), Expect(2) = 4e-46, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 78/82 (95%)
Frame = -1
Query: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
IF NTRRKVD LT++M + +FTVSAMHGDM+Q++R+VIM++FRSGSSRVLITTDLLARGI
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 337 DVQQVSLVINYDLPTNRENYIH 358
DVQQVSLVINYDLP+NRENYIH
Sbjct: 276 DVQQVSLVINYDLPSNRENYIH 211
Score = 56.6 bits (135), Expect(2) = 4e-46, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = -3
Query: 371 VAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
VAIN +T++D+R L+DIE FY+T+IEEMP N+ADLI
Sbjct: 175 VAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 68
>00621
Length = 2263
Score = 177 bits (448), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 195/396 (49%), Gaps = 35/396 (8%)
Frame = +1
Query: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISIL-- 91
+ + +L ++ I G+++P+ IQ +AI ++ D+I A++G+GKTA F I +L
Sbjct: 259 WKESDLGADIMEVIDRVGYKEPTPIQMQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVW 438
Query: 92 -------QQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEV 144
+++E + A++LAPTRELAQQI++ G+ +G + IGG + +
Sbjct: 439 IQSLPKIERLEDADQGPYAVILAPTRELAQQIEEETRKFGEGLGIRVVSVIGGISREEQG 618
Query: 145 QKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDI----- 199
KLQ + +++ TPGR+ D+L RYL V+DEAD M++ GF+ ++ I
Sbjct: 619 FKLQ-QGCEVVIATPGRMIDVLENRYLVLNQCTYVVMDEADRMINMGFEPEVRKILDYLP 795
Query: 200 --------------------FQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE 239
F+ + Q V+ +ATMP V + + F+R P + +
Sbjct: 796 VSNQKPDNDDAEDDLKMLQNFKSKHKYRQTVMFTATMPPQVERLARTFLRRPTVVYIGNV 975
Query: 240 ELTLEGIRQF-YINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 298
+E + Q Y+ E E+ K L ++ +IF+N ++ D L + + F
Sbjct: 976 GKPVERVEQIVYMLTESEKRK--KLIEVLNAGVDPPIIIFVNQKKGADVLAKSLEKMGFN 1149
Query: 299 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
+ +HG Q++R+ + + G+ +++ TD+ RGID++ VSLV+NYD+ E+Y H
Sbjct: 1150ATTLHGGKGQEQREYALASLKGGAKDIMVATDVAGRGIDIKDVSLVLNYDMARTIEDYTH 1329
Query: 359 XXXXXXXXXXXXVAINMVTEEDKRTLRDIETFYNTS 394
+I +T+ED D++ +S
Sbjct: 1330RIGRTGRAGKEGTSITFLTKEDSMVFYDLKQLMLSS 1437
>07310
Length = 712
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 144/239 (60%)
Frame = +2
Query: 161 RVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDV 220
R+ D++N+R + P + VLDEAD++LS+ FK + +I L Q++L SAT P V
Sbjct: 2 RILDLMNKRLVKPDTCGILVLDEADKLLSQDFKGMLDNIIAHLPPQRQILLYSATFPLSV 181
Query: 221 LEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFIN 280
+ KK++++P I + EELTL+G+ Q+Y V+ E+ K+ L L+ L I Q++IF N
Sbjct: 182 EQFMKKYLKNPYEINLM-EELTLKGVTQYYAFVQ-EKQKVHCLNTLFSKLQINQSIIFCN 355
Query: 281 TRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQ 340
+ ++V+ L +K+ ++ +H M+Q+ R+ + +FR G R L+ +DL RGID+Q
Sbjct: 356 STQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQA 535
Query: 341 VSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINMVTEEDKRTLRDIETFYNTSIEEMP 399
V++VIN+D P + E Y+H VAIN++T ED+ +L IE T I+ +P
Sbjct: 536 VNVVINFDFPKHAETYLHRIGRSGRYGHLGVAINLITFEDRFSLHKIEQELGTEIKPIP 712
>02498
Length = 1955
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 6/204 (2%)
Frame = +1
Query: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRA--ILPCIKGYDVIAQAQSGTGKTATFAI 88
V SF+ +NL LL+G+Y GF PS IQ+ A IL ++IAQ+QSGTGKTA F +
Sbjct: 130 VKSFEALNLKPQLLKGVYDMGFNAPSKIQETALPILLADPPVNMIAQSQSGTGKTAAFVL 309
Query: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNV-RAEVQK 146
++L ++++ Q L LAPT ELA QI +V+ + +M G + G V R EV
Sbjct: 310 TMLSRVDISQTFPQCLCLAPTYELALQIGEVIEKMSKHMTGLEIRYAVRGERVNRGEVLS 489
Query: 147 LQMEAPHIIVGTPGRVFDMLNR-RYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Q I++GTPG V D +R + L + +++FVLDEAD M+S +G +DQ I ++L+
Sbjct: 490 EQ-----IVIGTPGTVMDWSHRFKALPLEKLRVFVLDEADVMISMQGHQDQSTRIQKRLS 654
Query: 205 SNTQVVLLSATMPSDVLEVTKKFM 228
S Q++L SAT V++ ++ +
Sbjct: 655 SGCQMLLFSATYDQVVMQFAQRII 726
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 111/191 (58%), Gaps = 9/191 (4%)
Frame = +3
Query: 217 PSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
PS + +DP+ I +K+EE +L+ I+Q+YI+ +E K LC++Y ++++ Q++
Sbjct: 693 PSGDAVCSAHHPQDPVIISLKREEESLDNIKQYYIDCNSQEEKYVALCNIYGSISVGQSM 872
Query: 277 IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
IF + R WL E+M A V + G++ ++R I++ FR G +VLITT++ ARGI
Sbjct: 873 IFCHKRSTAAWLAERMTADHHAVGLLTGELTIEQRAAIIKRFREGKEKVLITTNVSARGI 1052
Query: 337 DVQQVSLVINYDLPTNR------ENYIHXXXXXXXXXXXXVAINMVTEEDKRT---LRDI 387
DV+ V++V+N+DLP + E Y+H +AINMV ++ R+ +R I
Sbjct: 1053DVEMVTVVVNFDLPVTQDWRPDCETYLHRIGRTGRFGKNGIAINMV--DNSRSMAIMRSI 1226
Query: 388 ETFYNTSIEEM 398
E + IE++
Sbjct: 1227EKHFGRKIEKL 1259
>09327
Length = 1087
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 126/236 (53%), Gaps = 4/236 (1%)
Frame = +2
Query: 105 VLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFD 164
+L PTRELAQQ+Q+V + G GG ++++L A I + TPGR+ D
Sbjct: 20 LLVPTRELAQQVQEVAVEFGHSSRVRSVCVYGGAQRGPQLRELDRGA-EICIATPGRLID 196
Query: 165 MLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVT 224
L + + VLDEAD ML GF+ QI I +++ + Q ++ SAT P +V ++
Sbjct: 197 FLESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRKLA 376
Query: 225 KKFMRDPIRILVKKEELTLEG----IRQFYINVEREEWKLDTLCDLYETLTITQAVIFIN 280
+ F+ + +I + +LT I ++ E+EE KL L + + +IF+
Sbjct: 377 EDFIMEYTQINIGALQLTANHNILQIIDVCMDHEKEE-KLVKLLNEIMQEKENRTLIFVE 553
Query: 281 TRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
T+RK D + +M + V +HGD Q+ERD ++ +FR+G VL+ TD+ +RG+
Sbjct: 554 TKRKCDDIHRRMKRDGWPVLCIHGDKSQQERDWVLNDFRNGRCPVLLATDVASRGL 721
>00739
Length = 1313
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 129/254 (50%), Gaps = 4/254 (1%)
Frame = +3
Query: 152 PHIIVGTPGRVFDMLNR-RYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
PHI++ TPGR+ D ++ S K +K V+DEAD +L F Q+ I +L S Q +
Sbjct: 42 PHIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDDNFGAQLEPILTRLPSARQTL 221
Query: 211 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVE---REEWKLDTLCDLY 267
L SAT+ V + + P + + E T++ +++ Y+ V ++ + + L
Sbjct: 222 LFSATLSPTVNALRDSVLNKPFVWIQQSERATVDELQEDYVLVPASMKDAYMVHILDHWL 401
Query: 268 ETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLI 327
+ + +IF T + L + F+ + +H + Q+ R + F+S +R+LI
Sbjct: 402 KDHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFRLSSLSRFKSNQTRILI 581
Query: 328 TTDLLARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINMVTEEDKRTLRDI 387
+TD+ +RG+D+ V L+IN+++P +Y+H +I++VTE D + ++ I
Sbjct: 582 STDVASRGLDIPTVDLIINHNIPNRPRDYVHRVGRTARAGRCGQSISLVTEFDIKLIKSI 761
Query: 388 ETFYNTSIEEMPLN 401
E+ N + E P+
Sbjct: 762 ESHINCQMTEHPVK 803
>01517
Length = 2605
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 11/247 (4%)
Frame = +2
Query: 164 DMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQK----LNSNTQVVLLSATMPSD 219
DM+ R + + VLDEAD ML GF+ QI I +K Q ++ SAT P +
Sbjct: 5 DMMERGKIGMDHCNYLVLDEADRMLDMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPKE 184
Query: 220 VLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLY-------ETLTI 272
+ + + F+ + I + V + T E I Q + VE E K L DL E+LT+
Sbjct: 185 IQLLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEPE-KRSFLLDLLMASGTGPESLTL 361
Query: 273 TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLL 332
+F+ T++ D L + + ++ +++HGD Q+ER+ +R F++G +L+ T +
Sbjct: 362 ----VFVETKKGADSLEQFLMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVA 529
Query: 333 ARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINMVTEEDKRTLRDIETFYN 392
ARG+D+ V VIN+DLP++ E Y+H +A + ++++ RD+
Sbjct: 530 ARGLDIPNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNIARDMLDLLT 709
Query: 393 TSIEEMP 399
+ +E+P
Sbjct: 710 EANQEVP 730
>02054
Length = 1110
Score = 77.0 bits (188), Expect(2) = 1e-25, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%)
Frame = -3
Query: 228 MRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDW 287
+RDP+++ V + T++ ++Q Y+ + ++K L + L ++F +T
Sbjct: 769 LRDPVKVEVSNKYQTVDTLQQSYLFIP-AKYKDAYLVSILNELAGNSFMVFCSTCANTQR 593
Query: 288 LTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINY 347
+ + FT +HG M Q +R + +F+S +LI TD+ +RG+D+ V +V+N
Sbjct: 592 VALLLRNLGFTAIPLHGQMSQAKRLGSLNKFKSKDRSILIATDVASRGLDIPHVDVVLNL 413
Query: 348 DLPTNRENYIHXXXXXXXXXXXXVAINMVTEEDKRTLRDIETFYNTSIEEMP 399
D+PT+ ++Y+H AI V++ D + IE + E P
Sbjct: 412 DIPTHSKDYMHRVGRTARAGRSGRAITFVSQYDVELYQRIEHLIGKKLSEYP 257
Score = 57.4 bits (137), Expect(2) = 1e-25, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 150 EAPHIIVGTPGRVFDML-NRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
+ PHII+ TPGR+ D L N + S + +K V+DEAD +L F+D++ I + +
Sbjct: 1007 KKPHIIIATPGRLVDHLENTKGFSLRALKFLVMDEADRILDMNFQDEVDKILKVIPRERN 828
Query: 209 VVLLSATMPSDVLEVTKKFMRDP 231
L SATM + V + T P
Sbjct: 827 TYLFSATMTNKVAKTTASITEGP 759
>04883
Length = 1155
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 5/239 (2%)
Frame = +3
Query: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
+F ++N + ++ + + P+ IQ ++ + G D++ AQ+G+GKT F + +
Sbjct: 363 TFTEVNFPDYVMNQVRRNSWTAPTPIQSQSWPVAMAGKDLVGIAQTGSGKTLAFMLPAIV 542
Query: 93 QIELDLKATQA-----LVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKL 147
I + L L PTRELAQQ+Q+V G GG +++ L
Sbjct: 543 HINHQAYLERGDGPIVLALVPTRELAQQVQEVAQEFGHASRVRSVCVYGGAPRGPQLRDL 722
Query: 148 QMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT 207
+ A I + TPGR+ D L + + VLDEAD ML GF+ QI I +++ +
Sbjct: 723 ERGA-EICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 899
Query: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDL 266
Q ++ SAT P +V ++ + F+ + +++ + ELT I+V E K D L L
Sbjct: 900 QTLMWSATWPKEVRKLAEDFIDEYVQVNIGALELTANHNILQIIDVCMEHEKEDKLVKL 1076
>00162
Length = 2322
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 5/262 (1%)
Frame = +3
Query: 102 QALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGR 161
+AL++ PTRELA QI +V+ + + S + IGG + E M +I++ T GR
Sbjct: 141 EALIITPTRELAFQIYEVLNKIRTFHDFSANLVIGGKFMWRETH--LMGKTNIVICTVGR 314
Query: 162 VFDML-NRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDV 220
+ L + + +K+ VLDEAD ++ F + I L Q +L SAT V
Sbjct: 315 LLHHLESTQAFDVSELKVLVLDEADRIMDSKFAQDMDSIMSHLPPR-QTLLFSATQTMSV 491
Query: 221 LEVTKKFMRDPIRILVKK--EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIF 278
+ + ++DP + V + E +T G+ Q YI E E KL L + + ++F
Sbjct: 492 KTLARLSLKDPSYVSVDRHAEYVTPTGLEQSYIVCELHE-KLSLLYSFLKNHPNNKIMVF 668
Query: 279 INTRRKVDWLTE--KMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGI 336
+ T ++ ++ K +V +HG + Q R I REF +LITTDL RG+
Sbjct: 669 LQTCKQARYVHTVIKRERPGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGL 848
Query: 337 DVQQVSLVINYDLPTNRENYIH 358
D V+ VI D P + YIH
Sbjct: 849 DFPAVNWVIQLDCPVDVNTYIH 914
>31899
Length = 453
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Frame = -1
Query: 28 NEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFA 87
+E VD F + LS+ +L G+ GFE+PS IQ +AI G D+I QA+SGTGKT F+
Sbjct: 354 SESVD-FASLLLSKPVLNGLKNAGFERPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFS 178
Query: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVR 141
+ L+ IE ++TQ LVLAPTRE+A QI +V+ ++G M G CH IGG V
Sbjct: 177 VVALEGIETTARSTQVLVLAPTREIALQIWEVINSIGSAMSGLQCHTFIGGLPVH 13
>11160
Length = 646
Score = 75.1 bits (183), Expect(2) = 9e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 15/189 (7%)
Frame = -1
Query: 136 GGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRR------YLSPKYIKMFVLDEADEMLS 189
GG + ++ K I++ TPGR+ D+ +R+ S K +++ VLDEAD +L
Sbjct: 646 GGVSCSHDISKFMKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLLD 467
Query: 190 RGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEG---- 245
GF+ I I L + L SAT +V + + +R+P+R+ VK+++L E
Sbjct: 466 MGFEASINTILGHLPKLRRTGLFSATQTDEVENLIRAGLRNPLRVTVKEKKLAGEADQRT 287
Query: 246 ---IRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA--RDFTVS 300
+ +Y+ VE EE K L +T + ++F +T VD+ + + + V
Sbjct: 286 PSTLSNYYMIVEAEE-KFSQLVKFLKTHHRDKLLLFFSTCACVDYFSMCLTQLLKHMQVL 110
Query: 301 AMHGDMDQK 309
++H M QK
Sbjct: 109 SIHSKMKQK 83
Score = 33.1 bits (74), Expect(2) = 9e-18, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -3
Query: 307 DQKERDVIMREFRSGSSRVLITTDLLARGID 337
D+ E + +FRS +S +L+ TD++ARG+D
Sbjct: 95 DEAEEKPVFAKFRSITSGLLVCTDVMARGVD 3
>22006
Length = 3414
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Frame = +2
Query: 55 PSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL-DLKATQALVLAPTRELA 113
P+ IQ++ I ++G D++A A++G+GKTA F + +L+++++ K +AL+L+PTRELA
Sbjct: 3005 PTPIQRKTIPVIMEGKDMVAMARTGSGKTAAFLVPMLERLKMHSSKGARALILSPTRELA 3184
Query: 114 QQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSP 173
Q K LG ++ +GG + + L + P II+ TPGR+ +L S
Sbjct: 3185 LQTLKFTKELGKFLDLRAAVILGGDRMEDQFSALH-QNPDIIIATPGRLLHVLVEMKKSL 3361
Query: 174 KYIKMFVLDEADEML 188
K + V DEAD +
Sbjct: 3362 KEVIYVVFDEADRLF 3406
>19525
Length = 585
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +2
Query: 101 TQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPG 160
T+ LVL PTRELA Q+ +V + Y S GG +++ + L++ P I+V TPG
Sbjct: 14 TRVLVLVPTRELAVQVYQVGQQISQYTKISICLAAGGLDIKGQEAALRL-CPDIVVATPG 190
Query: 161 RVFDML-NRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSD 219
R+ D L N + ++++ VLDEAD ML F Q+ +I + N Q +L SATM
Sbjct: 191 RLIDHLHNAPNFTIAHVEILVLDEADRMLDEYFAAQMTEIIRMCNFQRQTMLFSATMSDA 370
Query: 220 VLEVTKKFMRDPIRILVKKEELTLEGIRQFYINV 253
V ++ +++ +++ V + G++Q ++ +
Sbjct: 371 VQDLASVSLKEAVKVFVNQNTDIALGLQQEFVRI 472
>14337
Length = 693
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%)
Frame = +2
Query: 256 EEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIM 315
E KL + +L+ ++F+ ++++ L + V A+H D Q ERD +
Sbjct: 8 EAGKLMAMRNLFTEGITPPVLVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDATV 187
Query: 316 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINM 375
R F G VL+ T+L+ RGID + ++LVINYD PTN +YIH AI
Sbjct: 188 RAFTEGRVWVLVCTELMGRGIDFKGINLVINYDFPTNAVSYIHRIGRTGRAGVPGRAITF 367
Query: 376 VTEEDKRTLRDIETFYNTSIEEMP 399
TE+D LR I + E+P
Sbjct: 368 FTEQDVTHLRSIANIIKEAGCEVP 439
>08036
Length = 1226
Score = 60.5 bits (145), Expect(2) = 7e-15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Frame = +1
Query: 155 IVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSA 214
+VGTP R+ L +L ++M V+DEAD + S G + + + ++L Q L+SA
Sbjct: 1 VVGTPSRILAHLRAGHLELHTVQMLVVDEADLVFSFGHEADMKKLMEELPRIYQAFLMSA 180
Query: 215 TMPSDVLEVTKKFMRDPIRILVKKEELTLEG-IRQFYINVEREEWKLDTLCDLYETLTIT 273
T+ DV + K + +P+ + +K+ +L + Q+++ E ++ + L L
Sbjct: 181 TLSEDVKALKKMVLHNPVILKLKESQLPESTQLTQYHVKCEVDDKFTLMVAVLKLGLVRG 360
Query: 274 QAVIFINTRRKVDWLTE-KMHARDFTVSA--MHGDMDQKERDVIMREFRSGSSRVLITTD 330
++++F+N+ VD + K+ F + A ++ ++ K R I+ +F G ++I +D
Sbjct: 361 KSILFVNS---VDSCYKLKLFLEPFGIPACVLNSELPVKSRCHIVSQFNEGLYDIIIASD 531
Score = 37.7 bits (86), Expect(2) = 7e-15, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 332 LARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINMVTEEDKRTLRDIE 388
+ARGID Q VS VIN++ P + YIH A+++++ + +E
Sbjct: 609 VARGIDFQNVSNVINFEFPKTVDAYIHRVGRTARGDKQGCALSLISRHENDQFEAVE 779
>34295
Length = 694
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = -1
Query: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 331
I +IF NT++ L+ + + +HG M QKER + F+S R LI TD+
Sbjct: 544 IPNVMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLIATDV 365
Query: 332 LARGIDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINMVT-EEDKRTLRDIETF 390
ARG+D+ V LVIN+ LP + YIH VAI++ D L IE
Sbjct: 364 AARGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGVAISIFRFPRDLELLGAIEEE 185
Query: 391 YNTSIEEMPLN 401
NT + E P++
Sbjct: 184 INTKLTEHPID 152
>00617
Length = 1505
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 63/110 (57%)
Frame = -3
Query: 297 FTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY 356
F+ + +H + Q+ R + F+S +R+LI+TD+ +RG+D+ V L+IN+++P +Y
Sbjct: 1482 FSCAVLHSMIPQRFRLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDY 1303
Query: 357 IHXXXXXXXXXXXXVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
+H +I++VTE D + ++ IE+ N + E P+ +++
Sbjct: 1302 VHRVGRTARAGRCGQSISLVTEFDIKLIKSIESHINCQMTEHPVKEKEVL 1153
>33025
Length = 558
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Frame = +3
Query: 128 GASCHACI--GGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEAD 185
G H + G T+ R + ++ M+ +++VGTPGR+ D + + +S + +LDEAD
Sbjct: 33 GTDVHPSVVYGATDRRYQKSRI-MKGANLVVGTPGRLLDFIGDQTISLGKCQYLILDEAD 209
Query: 186 EMLSRGFKDQIYDIFQKLN----SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEEL 241
ML GF+ +I + + Q ++ SAT D+ + F+ D + I V
Sbjct: 210 RMLDMGFEPEIRKLVDTHGMPPKTQRQTLMFSATFKEDIQRLAGDFLNDYLFITVGIVGG 389
Query: 242 TLEGIRQFYINVEREEWKLDTLCDLYETLTITQAV 276
+ Q ++ V+R + K D LC++ + ++V
Sbjct: 390 ACSDVTQTFLEVDRLQ-KRDHLCEILNEMGTAKSV 491
>19172
Length = 484
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -1
Query: 273 TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLL 332
T+ +IF+ T+++VD +T + + + A+HGD Q+ERD ++ FR+G +L+ TD+
Sbjct: 334 TKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVA 155
Query: 333 ARGI 336
ARG+
Sbjct: 154 ARGL 143
>12995
Length = 1072
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%)
Frame = +3
Query: 276 VIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARG 335
V+F+ T+ V++L + + ++ +DQ R + + +F +V++ TDL ARG
Sbjct: 141 VVFVATKHHVEYLNTLLTKCGIACTYIYSSLDQTARKIHVAKFTHKQVKVMLVTDLAARG 320
Query: 336 IDVQQVSLVINYDLPTNRENYIHXXXXXXXXXXXXVAINMVTEEDKRTLRDIETFYNTSI 395
ID+ Q+ V+N+ P + ++H A ++V ++ L D+ F +
Sbjct: 321 IDIPQLDNVVNFHFPAKAKLFVHRVGRVARAGRSGTAYSLVAMDEVAHLVDLHVFLGRPL 500
Query: 396 EEMP 399
+ P
Sbjct: 501 KTAP 512
>17708
Length = 882
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Frame = +1
Query: 71 DVIAQAQSGTGKTATF---AISILQQIE-LDLKATQALVLAPTRELAQQIQKVVMALGDY 126
D++ A++G+GKT F AI ++ +++ + T ++++PTREL+ Q V+ L Y
Sbjct: 556 DLMGAAKTGSGKTLAFLIPAIELMYKLKFMPRNGTGCIIISPTRELSMQTFNVLTELLKY 735
Query: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDML 166
+ +GG N EV+KL+ + +IIV TPGR+ D L
Sbjct: 736 HHHTFGLIMGGVNRHDEVKKLK-KGVNIIVATPGRLLDHL 852
>17544
Length = 1047
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Frame = +2
Query: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90
++SF++ L E + I + KP+ +Q+ A+ + D++A AQ+G+GKTA F + I
Sbjct: 629 INSFEECTLGEIIRNNIVLSKYNKPTPVQKFALPIVLGKRDLMACAQTGSGKTAAFLLPI 808
Query: 91 LQQIELD------LKATQ-----------ALVLAPTRELAQQIQKVVMALGDYMGASCHA 133
L Q+ + L+ Q AL+LAPTRELA QI +
Sbjct: 809 LNQVYENGPTPEALQQNQSRGYRRKMYPIALILAPTRELASQIYDEARKFA--YRSRLRP 982
Query: 134 CI--GGTNVRAEVQKL 147
C+ GG ++ A+++ L
Sbjct: 983 CVVYGGADIGAQMRDL 1030
>30136
Length = 524
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Frame = +2
Query: 28 NEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFA 87
N I D F + L + +++ I G++ P+ IQ + + G + + A++G+GKT +
Sbjct: 122 NPIQD-FAEAYLPDYVIKEIRRQGYKSPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYI 298
Query: 88 ISIL-----QQIELDLKATQALVLAPTRELAQQIQKVVMALG--DYMGASCHACIGGTNV 140
+ + QQ + ALVLAPTRELAQQIQ+V G Y+ +C GG
Sbjct: 299 LPAIVHINNQQPLQRGEGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTC--VFGGAPK 472
Query: 141 RAEVQKLQ 148
+++ LQ
Sbjct: 473 GGQMRDLQ 496
>10649
Length = 472
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Frame = +1
Query: 289 TEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 348
+++ A +V +HG + Q R I REF +LITTDL RG+D V+ VI D
Sbjct: 43 SDQARAAGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLD 222
Query: 349 LPTNRENYIH 358
P + YIH
Sbjct: 223 CPVDVNTYIH 252
>19151
Length = 625
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Frame = -3
Query: 324 RVLITTDLLARGIDVQQVSLVINYDLP------TNRENYIHXXXXXXXXXXXXVAINMV- 376
+VLITT++L+RGID++QV++V+N+DLP + E Y+H +AIN++
Sbjct: 623 KVLITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIAINLID 444
Query: 377 TEEDKRTLRDIETFYNTSIEEMPLNVAD 404
E+ R IE + I + + AD
Sbjct: 443 GEKSMNVCRAIEKHFQKDIVYLNTDNAD 360
>11624
Length = 2257
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Frame = -1
Query: 242 TLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVD--WLTEKMHARDFTV 299
T EG+ ++ + + E L L L+ L + F N+ L K++ +V
Sbjct: 991 TPEGLTEYIVESDSSEKPLLVLHFLH-NLKFRSVLCFTNSVETTHRLCLLVKLYG-GLSV 818
Query: 300 SAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHX 359
+ + R I+++F G +L+ +D +ARG+DV V VI+YD P + YIH
Sbjct: 817 KEFSSRLPGERRKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNPPYIKTYIHR 638
Query: 360 XXXXXXXXXXXVAINMVTEED----KRTLRDIETFYNTSIEEMPLN 401
AI+++ +++ K+ +R+ + I+EM L
Sbjct: 637 VGRTARAGRAGTAISLLEKKEFFHFKQMMREAGKW--KKIKEMKLG 506
>39583
Length = 234
Score = 46.2 bits (108), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = -3
Query: 315 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
++ F+ G VL+ TDL +RG+D++ V VIN+ +P+ ++Y+H
Sbjct: 160 LKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTLKHYVH 29
>31781
Length = 416
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Frame = -2
Query: 230 DPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFI 279
+P+ I +++EE +L+ I+Q+YI K LC++Y ++++ Q++IF
Sbjct: 277 NPVTIRLRREEESLDNIQQYYIRCRTLSDKYRALCNIYGSISVGQSMIFC 128
>12121
Length = 465
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGF 192
I + TPGR+ D L + + VLDEAD ML GF
Sbjct: 463 ICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGF 347
>31220
Length = 818
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 333 ARGIDVQQVSLVINYDLPTNRENYIH 358
+RGID Q V+ VIN+D P + +YIH
Sbjct: 164 SRGIDFQGVNNVINFDFPLDVTSYIH 241
>33083
Length = 1931
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 334 RGIDVQQVSLVINYDLPTNRENYIH 358
RG+D+ QV ++ YD P + YIH
Sbjct: 1 RGLDIPQVDWIVQYDPPDESKEYIH 75
>10351
Length = 575
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 22 VIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQ 59
V + +W+ D+FDD NL LRG+Y YG AI+
Sbjct: 74 VKKVHWDCAWDTFDDSNL----LRGVYEYGMGSWEAIR 175
>06438
Length = 989
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 327 ITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
+T L RG+D V+ VI D P + YIH
Sbjct: 25 LTVTLACRGLDFPAVNWVIQLDCPVDVNTYIH 120
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31982472|ref|NP_031664.2| chaperonin containing Tcp1,
subunit 7 (eta) [Mus musculus]
(544 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09900 519 e-153
01159 239 3e-63
05356 115 2e-50
06409 152 5e-37
12796 132 3e-31
29864 122 4e-28
29631 110 2e-24
33770 92 7e-19
30661 79 4e-15
17249 63 4e-10
25058 32 0.81
02673 29 4.0
>09900
Length = 1305
Score = 519 bits (1337), Expect(2) = e-153, Method: Compositional matrix adjust.
Identities = 243/308 (78%), Positives = 277/308 (89%)
Frame = +3
Query: 233 KNPKIALLNVELELKAEKDNAEIRVHTVEDFQAIVDAEWNILYDKLEKIHQSGAKVILSK 292
+ P+IALLN+ELELK+E+DNAE+RV V+++Q+IVDAEW ILYDKL+KIHQSGAKV+LSK
Sbjct: 51 RTPRIALLNIELELKSERDNAEVRVDNVQEYQSIVDAEWKILYDKLDKIHQSGAKVVLSK 230
Query: 293 LPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQ 352
LPIGDVATQYFADRDMFCAGRVPEEDL+RTM ACGGSIQT+V +L PDVLG CQ+F+E Q
Sbjct: 231 LPIGDVATQYFADRDMFCAGRVPEEDLRRTMKACGGSIQTTVQSLTPDVLGTCQLFDEIQ 410
Query: 353 IGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAI 412
IGGER+N F GC A+TCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAI
Sbjct: 411 IGGERFNMFKGCTMARTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAI 590
Query: 413 EMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGG 472
EME+S +LR++S TI GK+QLL+ AYAKALE+IPRQLCDNAGFDATNILNKLR +HAQGG
Sbjct: 591 EMEVSYHLREHSHTIAGKEQLLMSAYAKALEVIPRQLCDNAGFDATNILNKLRQKHAQGG 770
Query: 473 MWYGVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDPPAP 532
WYGV+I E+IADNF+ VWEPA+V+INALTAASEA LI+SVDETIKNPRS AP
Sbjct: 771 TWYGVNILREDIADNFEDCVWEPAVVKINALTAASEATALILSVDETIKNPRSG-QGDAP 947
Query: 533 SAGRGRGQ 540
AGRGRG+
Sbjct: 948 GAGRGRGR 971
Score = 40.4 bits (93), Expect(2) = e-153, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 217 KKTFSYAGFEMQPKKYKNPK 236
KKTFSYAGFEMQPK Y P+
Sbjct: 1 KKTFSYAGFEMQPKAYSGPQ 60
>01159
Length = 2613
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 278/528 (52%), Gaps = 9/528 (1%)
Frame = +3
Query: 5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDG 62
P I+L++ S+ GI S+I A + +A ++T+LGP+G+DK++V G G T++NDG
Sbjct: 135 PFIILRDQDKKSRLTGIEAHKSHILAAKSVASILKTSLGPKGLDKMMVSGDGDVTVTNDG 314
Query: 63 ATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIII 122
ATIL ++DV H AK +V ++KSQD E+GDGTT V +LA L+Q + ++ G+HP I
Sbjct: 315 ATILDMMDVDHQIAKLMVQLSKSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIA 494
Query: 123 RAFRTATQLAVNKIKEIAVTVKKQDKVEQRKMLEKCAMTALSSKLISQQKVFFAKMVVDA 182
+ A + AV + +I+ + ++ + L K AMT L SK++++ AK+ VDA
Sbjct: 495 DGYEIAAKCAVETLDKISDNYEVD--LKNAEPLIKLAMTTLGSKIVNRCHRQMAKIAVDA 668
Query: 183 VMMLDEL----LQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIA 238
+M + +L + ++I ++ GG LE++ LV GV K S+ PK K+ KIA
Sbjct: 669 IMSVADLKRKDVDFELIKVEGKVGGKLEDTMLVKGVVVDKDMSHPQM---PKVVKDAKIA 839
Query: 239 LLNVELELKAEKDNAEIRVHTVEDFQAIVDAEWNILYDKLEKIHQSGAKVILSKLPIGDV 298
+L E K ++ + +VED++ + + E N ++ + GA +++ + D
Sbjct: 840 ILTCPFEPPKPKTKHKLDITSVEDYKKLREYELNKFESMVQSVKDKGANLVICQWGFDDE 1019
Query: 299 ATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIGG--E 356
A R++ V +++ +A GG I L + LG + E G +
Sbjct: 1020ANHLLLQRELPAVRWVGGPEIELIAIATGGRIVPRFEELTTEKLGKAGIVRELTFGTTKD 1199
Query: 357 RYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMEL 416
R C + TI +RGG + +EE +RSLHDA+ ++R ++++ VV GGGA E+
Sbjct: 1200RMLVIEECLNTRAVTIFIRGGNKMIVEEAKRSLHDALCVIRNLVRDNRVVYGGGAPEIAA 1379
Query: 417 SKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHA-QGGMWY 475
S + + + I +Q + ++++ALE +P L +N+G L ++++R +
Sbjct: 1380SVAVAEAADKISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKSRQVKEKNPRL 1559
Query: 476 GVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 523
G+D + D + V E + + A++ +I+ +D+ I+ P
Sbjct: 1560GIDCLLKGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDD-IRAP 1700
>05356
Length = 2339
Score = 115 bits (287), Expect(2) = 2e-50, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 120/228 (52%), Gaps = 2/228 (0%)
Frame = +1
Query: 295 IGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIG 354
+GD+A Y + + + DL+R + + V + G+C + +IG
Sbjct: 1078 VGDLAQHYCNKYKVMVIRLLSKWDLRRLCKSICATALPKVTTPRNEECGYCDLVYVDEIG 1257
Query: 355 GERYNFFT-GCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIE 413
F ++ T+I+RG + M++ ER+L D + + K+D +V G GA E
Sbjct: 1258 ETPVVIFQQNKDESPITTVIIRGSTDNIMDDIERALDDGVNTFKALTKDDRLVPGAGATE 1437
Query: 414 MELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGM 473
+EL+K + Y ++PG +Q + +A++LE+IPR L +N G AT+IL+KL A H +G
Sbjct: 1438 IELAKQITTYGESLPGLEQYAVKKFAESLEVIPRALAENTGMKATDILSKLYAAHQEGQQ 1617
Query: 474 WYGVDINNE-NIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETI 520
GVDI++ ++ D QA + + + R L A+ AAC ++ VD+ I
Sbjct: 1618 NAGVDIDDSGSVLDAKQANLTDLYLNRYWGLKFAAAAACTVLRVDQII 1761
Score = 102 bits (255), Expect(2) = 2e-50, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 147/292 (50%), Gaps = 8/292 (2%)
Frame = +2
Query: 8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATIL 66
+LK+G G+ + V NI AC+ +A+ R+ GP G +K++++ K ++ND ATIL
Sbjct: 230 MLKDGAKHFSGLDEAVYRNIEACKELAKTTRSAYGPHGQNKMVINHLEKLFVTNDAATIL 409
Query: 67 KLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFR 126
+ L+V HPAAK LV A Q+ E GDGT V + A L+ + + GL +I +
Sbjct: 410 RELEVQHPAAKMLVLAAHQQEQECGDGTNFVLVFAGALLENAEQLLRMGLSVTEVIEGYE 589
Query: 127 TATQLAVNKIKEIAV-TVKKQDKVEQRKMLEKCAMTALSSKLISQQ---KVFFAKMVVDA 182
A + A + ++ + VK E+ K TA+ + ++S+Q + F A ++ DA
Sbjct: 590 LALKKAHEILPKLVIGHVKNLRNKEEVK-------TAIRTSVMSKQYGNEDFLADLITDA 748
Query: 183 -VMMLDELLQLKMIGIK--KVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIAL 239
V +L + + ++ K+ G L +S + G+ FK+ E + K + K+A+
Sbjct: 749 CVSVLPAKISFSVDNVRVCKILGCGLLQSSTIQGMVFKRQ-----VEGEITKVEKAKVAV 913
Query: 240 LNVELELKAEKDNAEIRVHTVEDFQAIVDAEWNILYDKLEKIHQSGAKVILS 291
L+ + + + E+ + E +++ ++++ I ++G VI++
Sbjct: 914 FTCPLDSMQTETKGTVLIKNAEELMSFSKGEEDMMEEQIKGIKEAGVNVIVA 1069
>06409
Length = 1533
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Frame = -3
Query: 229 PKKYKNPKIALLNVELELKAEKDNAEIRVHTVEDFQAIVDAEWNILYDKLEKIHQSGAKV 288
P K + KI + + ++ V ++ E N + D ++KI ++G V
Sbjct: 1501 PSKVEKAKIGFIQFCISPPKTDMENQVIVSDYTQMDRVLREERNYILDIVKKIKKAGCNV 1322
Query: 289 ILSKLPI-----GDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLG 343
+L + I D+A + A + + ED++ G S++ +P+ LG
Sbjct: 1321 LLIQKSILRDAVSDLALHFLAKMKIMVVKDIEREDVEFVCKTLGCRPVASLDHFLPENLG 1142
Query: 344 HCQVFEETQIGGERYNFFTGCPK-AKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKN 402
+ EE Q G + TG +T T+++RG + +EE +RSLHDA+ ++R +K
Sbjct: 1141 SADLIEEVQTGSSKIVKATGIANPGQTVTVLIRGSNKLVLEEADRSLHDALCVIRCLVKK 962
Query: 403 DSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILN 462
+++AGGGA E E+S L Y+ T+ G +Q A+A+ALE+IP L +NAG + + +
Sbjct: 961 KALIAGGGAPETEMSMRLAAYANTLAGMEQYCFRAFAEALEVIPFTLAENAGLNPISTVT 782
Query: 463 KLRARHAQGGMWYGVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETIKN 522
LR RHAQG G+++ I + + V +P +V +A+T ASE I+ +D+ +
Sbjct: 781 XLRTRHAQGERTAGINVRKGAITNILEENVLQPLLVSTSAITLASETVRSILKIDDIVNC 602
Query: 523 PRS------TVDPPAP 532
RS +DP +P
Sbjct: 601 VRS*SASKVLLDPHSP 554
>12796
Length = 1316
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 177/348 (50%), Gaps = 10/348 (2%)
Frame = -3
Query: 190 LQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELELKAE 249
+ LK I + + GG +E+++LV G+ F T AG PK+ + KI L ++ + A
Sbjct: 1308 VDLKNIKVIRSLGGTVEDTELVNGLVF--TSRSAGTN-APKRIEKAKIGL--IQFCISAP 1144
Query: 250 KDNAEIRVHTVEDFQA---IVDAEWNILYDKLEKIHQSGAKVILSKLPI-----GDVATQ 301
K + + V V D+ A ++ E + + + +++I ++G V+L + I D+A Q
Sbjct: 1143 KTDMDHNV-IVSDYAAMDRVLKEERSYILNIVKQIKKAGCNVLLVQKSILRDAVSDLA-Q 970
Query: 302 YFADR-DMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIGGERYNF 360
+F D+ V ED++ S++ + + + EE G ++
Sbjct: 969 HFLDKIKCLVVKDVEREDIEFVCKTLHCRPIASLDHFTAENMSSADLVEEVASGTNKFVK 790
Query: 361 FTGCP-KAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKY 419
TG + +T +II RG + +EE RSLHDA+ +VR ++N + + GGGA E+E++
Sbjct: 789 ITGIQNQGRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVRNRAQIVGGGAPEIEMALQ 610
Query: 420 LRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDI 479
L ++T+ G A+A ALE+IP L +NAG + + +LR RHAQG G+++
Sbjct: 609 LAAAAQTVDGVDAYCYRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINV 430
Query: 480 NNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTV 527
I D F V +P +V +A+T A+E I+ +D+ + TV
Sbjct: 429 RKGAITDIFAENVVQPLLVSTSAITLATETVRSILKIDDIVNTYS*TV 286
>29864
Length = 1026
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 141/266 (53%), Gaps = 3/266 (1%)
Frame = +1
Query: 22 LVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVD 81
L NI+A + + + +R+ LGP+G K++V G G ++ DG +L + + HP A +
Sbjct: 166 LAVNIAAAKGLQDVLRSNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAR 345
Query: 82 IAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAV 141
+A +QD GDGTTS L+ E LKQ Y+ EGLHP++I F +LA NK E+
Sbjct: 346 VATAQDDITGDGTTSNVLIIGELLKQADLYIAEGLHPRLITEGF----ELARNKALEVLE 513
Query: 142 TVKKQDKVEQRKMLEKCAMTALSSKLISQQKVFFAKMVVDAVMMLD---ELLQLKMIGIK 198
VK + +V+ R+ L + A T+L +K+ ++ + VVDAV+ + E + L M+ +
Sbjct: 514 EVKVKREVD-RETLVQVARTSLRTKVHTELADLLTEHVVDAVLAIQXPGEGIDLHMVELM 690
Query: 199 KVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELELKAEKDNAEIRVH 258
++Q +S LV G+ + + K K+ I NV LE + + N+
Sbjct: 691 EMQHKTDLDSTLVRGLVMDHGARHPDMK---KHTKDAFILTCNVSLEYEKTEVNSGFFYK 861
Query: 259 TVEDFQAIVDAEWNILYDKLEKIHQS 284
T ++ + +V+AE + +++ K H S
Sbjct: 862 TAQEREKLVEAERTFIDERVRKNHCS 939
>29631
Length = 1257
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Frame = +3
Query: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATI 65
+I+L + T G + NI+A + IA+ +RT LGP+ M K+++D G ++NDG I
Sbjct: 3 IIVLNQNTRRESGRKVQLGNIAAGKTIADVIRTCLGPKSMLKMLMDPMGGIVMTNDGNAI 182
Query: 66 LKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAF 125
L+ ++V HPAAK+++++A++QD E GDGT SV +LA E L + ++E+ +HP +II A+
Sbjct: 183 LREINVQHPAAKSMIEVARTQDEETGDGTKSVIILAGEVLSVAEQFLEQQMHPTVIIAAY 362
Query: 126 RTATQLAVNKIK-EIAVTVKKQDKVEQRKMLEKCAMTALSSKLISQQ 171
R A + + ++ +I + D+ +ML +T LS I QQ
Sbjct: 363 RQALEDTLEVLRTKICTPIDISDR---NQMLN--IVTKLSGHQIHQQ 488
Score = 61.2 bits (147), Expect(2) = 4e-21, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 348 FEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVA 407
E +IG + + F C K CTI+LRG ++ + E ER+L DA+ + R + + +
Sbjct: 1035 LEVRKIGDDYFTFLVDCKSPKACTILLRGASKDILAEVERNLQDAMNVARNVMIDPHLCP 1214
Query: 408 GGGAIEMELSKYL 420
GGGA EM L++ L
Sbjct: 1215 GGGASEMALAQAL 1253
Score = 58.5 bits (140), Expect(2) = 4e-21, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 87/192 (45%), Gaps = 7/192 (3%)
Frame = +1
Query: 159 AMTALSSKLISQQKVFFAKMVVDAVMML-------DELLQLKMIGIKKVQGGALEESQLV 211
+ + L +K IS+ ++ +DA + E+ + ++K+ GG +EES+++
Sbjct: 454 SQSCLGTKFISKWMDLACQIALDATTTVFMEENGRKEIDIKRYAKVEKIPGGTMEESEVL 633
Query: 212 AGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELELKAEKDNAEIRVHTVEDFQAIVDAEW 271
G+ K + + ++ +NP+I LL+ LE K + I + EDF I+ E
Sbjct: 634 KGIXVNKDVVHXKMK---RRIENPRIMLLDCNLEYKKGESATNIEISKEEDFAKILQLEE 804
Query: 272 NILYDKLEKIHQSGAKVILSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQ 331
+ ++I +++++ + D+A + + RV + D R ACG +I
Sbjct: 805 EYIRKMCDEIIALKPDLVITEKGVSDLAQHFLLKAGISVLRRVRKTDNNRIARACGATIA 984
Query: 332 TSVNALVPDVLG 343
+ L + +G
Sbjct: 985 NRTDELKEEDMG 1020
>33770
Length = 484
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 5/165 (3%)
Frame = +1
Query: 47 KLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLK 106
K+I G TI+NDGATILK + V+HPAAK LV+++K+QD E GDGTT+V +LA L
Sbjct: 1 KMIQAANGDVTITNDGATILKQMQVLHPAAKMLVELSKAQDIEXGDGTTTVVVLAGSLLD 180
Query: 107 QVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKQDKVEQRKMLEKCAMTALSSK 166
+ +G+HP +I AF Q A +K E+ + K ++ R+ L A T+L+SK
Sbjct: 181 ASAKLLAKGIHPTMISEAF----QKAASKCVELLDGMVKPLELSDRESLLSSASTSLNSK 348
Query: 167 LISQQKVFFAKMVVDAVM-MLDEL----LQLKMIGIKKVQGGALE 206
++SQ A + VDAV+ ++D + LK I I K GG ++
Sbjct: 349 VVSQYSSMLAPIAVDAVLKVIDPATATNVDLKDIKIIKKLGGTID 483
>30661
Length = 380
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%)
Frame = +3
Query: 323 MMACGGSIQTSVNALVPDVLGHCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFM 382
+ + GG I ++ + LG C + EE IG ++ F+G + CTI+LRG +Q +
Sbjct: 18 LWSLGGEITSTFDCPEKTKLGQCDLIEEVMIGEDKLIKFSGVALGEACTIVLRGATQQIL 197
Query: 383 EETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKAL 442
+E RSLHDA+ ++ + +K V GGG EM +++ + + PGK+ A A+
Sbjct: 198 DEAXRSLHDALCVLSQTVKETRTVYGGGCSEMLMAEAVSQLAAKTPGKE-------AIAM 356
Query: 443 EIIP 446
E +P
Sbjct: 357 EALP 368
>17249
Length = 909
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +3
Query: 439 AKALEIIPRQLCDNAGFDATNILNKLRARHAQG--GMWYGVDINNENIADNFQAFVWEPA 496
++ALE+I R L N G + L LRA+HAQG W G+D N NI D + +WEP
Sbjct: 6 SRALEVISRTLIQNCGANTIRTLTALRAKHAQGQKNTW-GIDGNTGNIVDMAEFGIWEPL 182
Query: 497 MVRINALTAASEAACLIVSVDETIKNPR 524
V++ A E A L++ +D+ + +
Sbjct: 183 SVKLQVYKTACETAILLLRIDDIVSGTK 266
>25058
Length = 1058
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 73 HPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQV 108
H A+KTL+ I A V GTT++T+L+ E +K +
Sbjct: 20 HAASKTLIAICSGS*ASVVHGTTAITVLSIE*IKHL 127
>02673
Length = 1243
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 431 QQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHA-QGGMWYGVDINNENIADNFQ 489
+Q + ++++ALE +P L +N+G L ++++R + G+D + D +
Sbjct: 64 EQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKSRQVKEKNPRLGIDCLLKGTNDMKE 243
Query: 490 AFVWEPAMVRINALTAASEAACLIVSVDETIKNP 523
V E + + A++ +I+ +D+ I+ P
Sbjct: 244 QNVIETLTAKKQQILLATQLVRMILKIDD-IRAP 342
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6754972|ref|NP_035163.1| poly A binding protein,
cytoplasmic 2 [Mus musculus]
(628 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
17775 537 e-153
39438 120 2e-27
25691 74 2e-13
17681 71 1e-12
02343 67 2e-11
08958 62 8e-10
11687 61 2e-09
03744 59 6e-09
20488 59 7e-09
16427 59 7e-09
14258 55 1e-07
30672 54 3e-07
13822 53 4e-07
02140 52 1e-06
14637 51 1e-06
28455 49 6e-06
31310 49 8e-06
28605 47 2e-05
13457 45 2e-05
03200 46 4e-05
19868 45 9e-05
01278 45 1e-04
28652 44 1e-04
03903 43 4e-04
15371 42 8e-04
20169 42 0.001
33516 41 0.001
02347 41 0.001
00029 41 0.001
00302 41 0.001
35379 40 0.003
02064 40 0.004
31618 39 0.006
00556 39 0.007
12506 39 0.008
02809 39 0.008
03000 39 0.009
32386 37 0.024
03059 37 0.031
00781 36 0.053
32733 36 0.057
09736 35 0.069
02091 35 0.071
08670 35 0.074
23322 35 0.085
25950 35 0.095
26197 35 0.11
15503 35 0.12
03406 35 0.13
39789 35 0.13
28372 34 0.20
10194 33 0.45
11019 32 0.99
12350 32 1.0
25632 31 1.3
03097 31 1.4
12096 30 2.7
11579 30 2.7
15931 30 2.8
04988 30 3.7
23720 30 4.2
00741 29 5.7
>17775
Length = 1282
Score = 537 bits (1383), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/391 (67%), Positives = 311/391 (79%), Gaps = 1/391 (0%)
Frame = -2
Query: 1 MNSSDPGCPMASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFE 60
MN+ P PMASLYVGDLHPDVTEAML+EKFS+AGP+LSIRV RD+ITRRSLGYA VNF+
Sbjct: 1224 MNNPGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ 1045
Query: 61 QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFS 120
QPADAERALDTMNFD +KG+P+RIMWSQRDPS+R+SGVGNVFIKNL+KTIDNKALYDTFS
Sbjct: 1044 QPADAERALDTMNFDTVKGRPIRIMWSQRDPSVRKSGVGNVFIKNLDKTIDNKALYDTFS 865
Query: 121 AFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKERE 180
AFGNILSCK+ DE GSKG+GFVHFETEEAA +AI+K+NGMLLN +KV+VGRF +KER
Sbjct: 864 AFGNILSCKIACDEQGSKGYGFVHFETEEAARQAIDKVNGMLLNGKKVYVGRFIPRKERI 685
Query: 181 AELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQI-LSVKVMTDEXXXXXXXXXXXXE 239
+G K F NVY+KNF L + Q L E E
Sbjct: 684 MMMGDKLKRFNNVYVKNFC*GTG*RPAA*LVWQARQDHLXXGACRGEDGKSRGFGFVSFE 505
Query: 240 RHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGINLYVK 299
E A+KAVDE+NG E++G+ IY GRAQK+ +R ELK +FE++ ++ RYQG+NLYVK
Sbjct: 504 EPEGAEKAVDEINGTEVSGRIIYCGRAQKRAERQAELKERFEKIKLERINRYQGVNLYVK 325
Query: 300 NLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMNGRIVA 359
NLDD IDDERL+KEFS FGTITS K+MTEGGRSKGFGFVCFSSPEEATKAV+EMNGRI+
Sbjct: 324 NLDDSIDDERLRKEFSNFGTITSAKIMTEGGRSKGFGFVCFSSPEEATKAVTEMNGRIIV 145
Query: 360 TKPLYVALAQRKEERQAHLTNQYIQRMASVR 390
KPLYVALAQRKE+R+A L ++Y+Q MA++R
Sbjct: 144 AKPLYVALAQRKEDRRAQLASRYMQHMANLR 52
>39438
Length = 2557
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Frame = +2
Query: 529 AVCIQGQEPWTASMLVTAP-QEPKQMLGERLFPLIQAMHPTLAGKITGMLLDIDNSEPLR 587
+V I GQEP TASML AP QE KQMLGERLFPLIQ M+P LAGKITGMLL+IDNSE L
Sbjct: 188 SVVIPGQEPLTASMLAAAPPQEQKQMLGERLFPLIQRMYPDLAGKITGMLLEIDNSELLH 367
Query: 588 MLESPVSRCSRAEEAVATLQAHQVKEAA 615
MLES S ++ EEAVA LQAHQ KEAA
Sbjct: 368 MLESQESLKAKVEEAVAVLQAHQAKEAA 451
>25691
Length = 768
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = -2
Query: 39 SIRVYRDVITRRSLGYASVNFEQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGV 98
+ ++ RD T +SLGY VN+++ DA++A+ T+N ++ K +++ ++ PS
Sbjct: 434 TCKLIRDKPTGQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLAR--PSCESIKG 261
Query: 99 GNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG--SKGHGFVHFETEEAAERAIE 156
N++I L K++ L + F+ GNI++ +++ D+ SKG GF+ F+ AERAI+
Sbjct: 260 ANLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIEAERAIQ 81
Query: 157 KMNGML 162
K+N +
Sbjct: 80 KLNNHI 63
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Frame = -2
Query: 239 ERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGINLYV 298
+R EDA KA+ +NG L K I V A+ + SI+ G NLY+
Sbjct: 371 KRQEDADKAIHTLNGLRLQNKTIKVSLARPSCE----------------SIK--GANLYI 246
Query: 299 KNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAVSEMNGR 356
L + L+ F+ G I +++++ + G SKG GF+ F EA +A+ ++N
Sbjct: 245 SGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIEAERAIQKLNNH 66
Query: 357 IV--ATKPLYVALA 368
I P+ V A
Sbjct: 65 IPDGCIDPITVKFA 24
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = -2
Query: 127 SCKVVSDE--NGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELG 184
+CK++ D+ S G+GFV+++ +E A++AI +NG+ L ++ + V + E
Sbjct: 434 TCKLIRDKPTGQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLARPSCE------ 273
Query: 185 TGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDE 226
+ + N+YI + L LF G I++ +++ D+
Sbjct: 272 --SIKGANLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQ 153
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = -2
Query: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALD 70
A+LY+ L +T+ L F+ G I++ R+ D T S G + F+Q +AERA+
Sbjct: 260 ANLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIEAERAIQ 81
Query: 71 TMNFDVIKG--KPVRIMWS 87
+N + G P+ + ++
Sbjct: 80 KLNNHIPDGCIDPITVKFA 24
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -2
Query: 330 GRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQ 369
G+S G+GFV + E+A KA+ +NG + K + V+LA+
Sbjct: 404 GQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLAR 285
>17681
Length = 964
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 86/205 (41%), Gaps = 45/205 (21%)
Frame = +2
Query: 13 LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTM 72
++VGDL P++ L E F+ G I + R+ RD T +S GYA V+F + A+AE A+ M
Sbjct: 38 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAM 217
Query: 73 NFDVIKGKPVRIMWSQRD-PSLRRSG-----------------VGNVFIKNLNK------ 108
N I + +R WS R P R S IKN +
Sbjct: 218 NGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGCGGGAGNGIKNNQRHTFEEV 397
Query: 109 -------------------TIDNKALYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEE 149
I ++ ++ F FG I +V D KG F+ F T+E
Sbjct: 398 YNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD----KGFAFIKFVTKE 565
Query: 150 AAERAIE--KMNGMLLNDRKVFVGR 172
AA RAIE ++ + N K F G+
Sbjct: 566 AAARAIEHTHISEVHGNHVKCFWGK 640
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDEN--GSKGHGFVHFETEEAAERAIEK 157
++F+ +L+ I+ + L + F+ FG I +C++V D SKG+ FV F + AE AI+
Sbjct: 35 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQA 214
Query: 158 MNGMLLNDRKV 168
MNG + R +
Sbjct: 215 MNGQWIGSRSI 247
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +2
Query: 295 NLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAVSE 352
+++V +L I+ E L++ F+PFG I++ +++ + +SKG+ FV F EA A+
Sbjct: 35 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQA 214
Query: 353 MNGRIVATKPLYVALAQRK 371
MNG+ + ++ + + RK
Sbjct: 215 MNGQWIGSRSIRTNWSTRK 271
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 35/202 (17%)
Frame = +2
Query: 192 NVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTD-EXXXXXXXXXXXXERHEDAQKAVDE 250
++++ + ++ ETL F FG+I + +++ D + + +A+ A+
Sbjct: 35 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQA 214
Query: 251 MNGKELNGKHIYVGRAQKK----------------------------DDRHTELKHKFEQ 282
MNG+ + + I + +K + +H FE+
Sbjct: 215 MNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGCGGGAGNGIKNNQRHTFEE 394
Query: 283 VTQDKSIRYQGINLYVKNL-DDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFS 341
V S +Y + I DE + K F FG I +V + KGF F+ F
Sbjct: 395 VYNQSSP--TNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVF----KDKGFAFIKFV 556
Query: 342 SPEEATKA-----VSEMNGRIV 358
+ E A +A +SE++G V
Sbjct: 557 TKEAAARAIEHTHISEVHGNHV 622
>02343
Length = 1715
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Frame = -2
Query: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETEEAAERAIEK 157
N++I+ L+ +K L + FG I S K + D+ N KG+GFV F+ AAERA++
Sbjct: 1261 NLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQA 1082
Query: 158 MNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQI 217
+ + + Q+E++ TN+YI N ++ L GLF +G +
Sbjct: 1081 LQAQGIQ------AQMAKQQEQDP---------TNLYIANLPLHFTEKHLEGLFKDYGTV 947
Query: 218 LSVKVMTDEXXXXXXXXXXXXERHEDAQKAVDEMNGKELNG--KHIYVGRAQKKDDRHTE 275
+S +++ E + ++ N K ++G + + V A + + ++
Sbjct: 946 ISTRILRKPDGISRCVGFARMESRDKCDTVINTFNNKMISGCSEPLLVKFADSGNKKKSQ 767
Query: 276 LKHKFEQVTQDKSIRY 291
+ K Q+ +D +++
Sbjct: 766 -QQKMFQLGRDDGLQF 722
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Frame = -2
Query: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
+LY+ L P+ T+ L G I S + D T + GY V+F+ P AERA+
Sbjct: 1261 NLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQA 1082
Query: 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV 131
+ I+ + + ++DP+ N++I NL K L F +G ++S +++
Sbjct: 1081 LQAQGIQAQMAK--QQEQDPT-------NLYIANLPLHFTEKHLEGLFKDYGTVISTRIL 929
Query: 132 SDENG-SKGHGFVHFETEEAAERAIEKMNG-MLLNDRKVFVGRF-------KSQKEREAE 182
+G S+ GF E+ + + I N M+ + + +F KSQ+++ +
Sbjct: 928 RKPDGISRCVGFARMESRDKCDTVINTFNNKMISGCSEPLLVKFADSGNKKKSQQQKMFQ 749
Query: 183 LG 184
LG
Sbjct: 748 LG 743
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = -2
Query: 295 NLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAVSE 352
NLY++ L D+ L FGTITSTK + + + KG+GFV F +P A +AV
Sbjct: 1261 NLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQA 1082
Query: 353 MNGRIVATKPLYVALAQRKEERQAHLTNQYIQRM 386
+ + + AQ ++++ TN YI +
Sbjct: 1081 LQAQGIQ--------AQMAKQQEQDPTNLYIANL 1004
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Frame = -2
Query: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEXXXXXXXX-XXXXERHEDAQKAVD 249
TN+YI+ D+ L L FG I S K + D+ + A++AV
Sbjct: 1264 TNLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQ 1085
Query: 250 EMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDER 309
+ + + + + + Q++D NLY+ NL ++
Sbjct: 1084 ALQAQGIQAQ---MAKQQEQDP----------------------TNLYIANLPLHFTEKH 980
Query: 310 LQKEFSPFGTITSTKVMTE-GGRSKGFGFVCFSSPEEATKAVSEMNGRIVA--TKPLYVA 366
L+ F +GT+ ST+++ + G S+ GF S ++ ++ N ++++ ++PL V
Sbjct: 979 LEGLFKDYGTVISTRILRKPDGISRCVGFARMESRDKCDTVINTFNNKMISGCSEPLLVK 800
Query: 367 LAQRKEERQAH 377
A ++++
Sbjct: 799 FADSGNKKKSQ 767
>08958
Length = 680
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Frame = +2
Query: 13 LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERA-LDT 71
L+VG+L PDV+E + FS G + V + R G+ +++ A+A +A LD
Sbjct: 74 LFVGNLTPDVSEDDFKKLFSPFGEVSEAYVN----SGRGFGFIRLDYRHNAEAAKAALDG 241
Query: 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV 131
+ KG+ +R+ ++ +L+ +KNL+ + N+ L F+ FG++ V+
Sbjct: 242 LQ---RKGRSLRVRYATHGAALK--------VKNLHPYVSNELLEQAFTQFGDLERAIVI 388
Query: 132 SDENG-SKGHGFVHFETEEAAERAIEKMN-GMLL 163
DE G S G G V F + A++A+ ++N G+ L
Sbjct: 389 VDERGRSTGEGVVEFVRKPGAQQALRRINEGVFL 490
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 3/173 (1%)
Frame = +2
Query: 83 RIMWSQRDPSLRR---SGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSKG 139
R S+R RR +G +F+ NL + FS FG + V N +G
Sbjct: 11 RTSASRRVKEYRRKKFTGRCRLFVGNLTPDVSEDDFKKLFSPFGEVSEAYV----NSGRG 178
Query: 140 HGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFG 199
GF+ + AE A ++G+ R + V R A G K +KN
Sbjct: 179 FGFIRLDYRHNAEAAKAALDGLQRKGRSLRV--------RYATHGAALK------VKNLH 316
Query: 200 DRMDDETLNGLFGRFGQILSVKVMTDEXXXXXXXXXXXXERHEDAQKAVDEMN 252
+ +E L F +FG + V+ DE R AQ+A+ +N
Sbjct: 317 PYVSNELLEQAFTQFGDLERAIVIVDERGRSTGEGVVEFVRKPGAQQALRRIN 475
>11687
Length = 676
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Frame = +3
Query: 13 LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNF---EQPADAERAL 69
++VG + ++ E L + F GP+ S+ + RD T +S G V F + DA+ AL
Sbjct: 156 MFVGQIPRNMDENELRKMFEDYGPVHSLNILRDKNTGQSKGCCFVTFFTRKAALDAQNAL 335
Query: 70 DTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNV-----FIKNLNKTIDNKALYDTFSAFGN 124
+ + PV++ + S +R+G NV F+ L+K + + F +FG+
Sbjct: 336 HNVKTMPMMHHPVQMKPAD---SEKRNGERNVEERKLFVGMLSKKLSENDVRMLFESFGS 506
Query: 125 ILSCKVVSDENG-SKGHGFVHFETEEAAERAIEKMN 159
I C V+ D NG S+G F+ F + + A +I+ M+
Sbjct: 507 IDDCTVLRDSNGTSRGCAFITFASRQCAMNSIKGMH 614
>03744
Length = 3486
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = -1
Query: 293 GINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEG--GRSKGFGFVCFSSPEEATKAV 350
G NL++ +L D+ L + F PFG + S KV + SK FGFV + SP A A+
Sbjct: 3219 GANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAI 3040
Query: 351 SEMNGRIVATKPLYVALAQRKEER 374
+ MNG + K L V L + K ++
Sbjct: 3039 TSMNGFQIGMKRLKVQLKRSKNDK 2968
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = -1
Query: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETEEAAERAIEK 157
N+FI +L + ++ L F FGN++S KV D+ N SK GFV +++ AA+ AI
Sbjct: 3213 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAITS 3034
Query: 158 MNGMLLNDRKVFVGRFKSQKER 179
MNG + +++ V +S+ ++
Sbjct: 3033 MNGFQIGMKRLKVQLKRSKNDK 2968
>20488
Length = 3281
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +2
Query: 293 GINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAV 350
G NL++ +L D+ L + F PFG + S KV + SK FGFV + SP A A+
Sbjct: 2705 GANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAI 2884
Query: 351 SEMNGRIVATKPLYVALAQRKEER 374
+ MNG + K L V L + K ++
Sbjct: 2885 TSMNGFQIGMKRLKVQLKRSKNDK 2956
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +2
Query: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETEEAAERAIEK 157
N+FI +L + ++ L F FGN++S KV D+ N SK GFV +++ AA+ AI
Sbjct: 2711 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAITS 2890
Query: 158 MNGMLLNDRKVFVGRFKSQKER 179
MNG + +++ V +S+ ++
Sbjct: 2891 MNGFQIGMKRLKVQLKRSKNDK 2956
>16427
Length = 1313
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGR--SKGFGFVCFSSPEEATKAVSEM 353
L+V L + ID++ L++EFS FG IT + V+ + R S+GFGFV + +P +A +AV M
Sbjct: 142 LFVGGLAEEIDEKVLEREFSKFGRITESMVIRDKVRQVSRGFGFVTYENPMDAEEAVKHM 321
Query: 354 NGRIVATKPLYVALAQR 370
+G+ + K L+V A R
Sbjct: 322 DGKEILGKKLHVEDAVR 372
>14258
Length = 1063
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +2
Query: 304 GIDDERLQKEFSPFGTITSTKVMTEG--GRSKGFGFVCFSSPEEATKAVSEMNGRIVATK 361
G+ D+ L + F PFG + S KV + SK FGFV + SP A A+S MNG + K
Sbjct: 92 GVGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISSMNGFQIGMK 271
Query: 362 PLYVALAQRKEER 374
L V L + K ++
Sbjct: 272 RLKVQLKRPKNDK 310
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Frame = +2
Query: 110 IDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETEEAAERAIEKMNGMLLNDRK 167
+ ++ L F FGN++S KV D+ N SK GFV +++ +A+ AI MNG + ++
Sbjct: 95 VGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISSMNGFQIGMKR 274
Query: 168 VFVGRFKSQKERE------AELGTGTKEFTNVY 194
+ V + + ++ A LG+ + + T Y
Sbjct: 275 LKVQLKRPKNDKPY*TSCLAXLGSASSDDTMAY 373
>30672
Length = 877
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKV-MTEGGRSKGFGFVCFSSPEEATKAVSEMN 354
L ++NL + ++ F FGTI+ + + +G RS+GF FV F+ + A KA+S+MN
Sbjct: 411 LIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQGDRSRGFAFVQFTEVKAAQKAISDMN 590
Query: 355 GRIVATKPLYVALAQRKEERQA 376
G + +P+ V A K+ +A
Sbjct: 591 GTAIMDRPVAVDWAVAKDRFEA 656
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 292 QGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMT--EGGRSKGFGFVCFSSPEEATKA 349
Q L+V+NL +E+L + F G + + V+ E G+ +GFG+V FS E+A KA
Sbjct: 6 QSKTLFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLEDAIKA 185
Query: 350 ---VSEMNGRIVA 359
V+ +GR ++
Sbjct: 186 KDTVTHCSGRKIS 224
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 82/224 (36%), Gaps = 39/224 (17%)
Frame = +3
Query: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSK--GHGFVHFETEEAAERAIE-- 156
+F++NL N+ L + F G + + VV+ + K G G+V F E A +A +
Sbjct: 18 LFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLEDAIKAKDTV 197
Query: 157 ------KMNGMLLNDRKVFVGRFKSQKEREAELGTGTK---------------------- 188
K++ + +K + + K E LG G K
Sbjct: 198 THCSGRKISLSFADTKKSWKTKQKGGTETSDALGLGKKLPSQTAVTDGEPNPKPEKKKTK 377
Query: 189 -------EFTNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEXXXXXXXXXXXXERH 241
+ + I+N + + + FG+FG I V + +
Sbjct: 378 QPKQELGKRCRLIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQGDRSRGFAFVQFTEV 557
Query: 242 EDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQ 285
+ AQKA+ +MNG + + + V A KD +FE TQ
Sbjct: 558 KAAQKAISDMNGTAIMDRPVAVDWAVAKD--------RFEASTQ 665
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 13 LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTM 72
L + +L EA + F G I + + RS G+A V F + A++A+ M
Sbjct: 411 LIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQ-GDRSRGFAFVQFTEVKAAQKAISDM 587
Query: 73 NFDVIKGKPVRIMWS 87
N I +PV + W+
Sbjct: 588 NGTAIMDRPVAVDWA 632
>13822
Length = 963
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = -1
Query: 115 LYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFV 170
L FG IL +++ +E GSKG GFV F AERA +KMNG ++ RK+ V
Sbjct: 294 LRQLLGPFGTILDVEIIFNERGSKGFGFVTFAHSAEAERARDKMNGTVVEGRKIEV 127
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = -1
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMNG 355
L+V N+ + L++ PFGTI +++ SKGFGFV F+ EA +A +MNG
Sbjct: 336 LHVSNIPFRFREADLRQLLGPFGTILDVEIIFNERGSKGFGFVTFAHSAEAERARDKMNG 157
Query: 356 RIVATKPLYV 365
+V + + V
Sbjct: 156 TVVEGRKIEV 127
>02140
Length = 1796
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%)
Frame = +3
Query: 3 SSDPGCPMASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQP 62
+D P L+V L+P T+ L FS GPI S V RD T+ SL YA V FE+P
Sbjct: 777 DADTKPPDNVLFVCKLNPVTTDEDLEMIFSRFGPITSCEVIRDHKTKESLQYAFVEFEKP 956
Query: 63 ADAERALDTMNFDVIKGKPVRIMWSQ 88
E A M+ +I + + + +SQ
Sbjct: 957 EHCENAYFKMDNVLIDDRRIHVDFSQ 1034
>14637
Length = 455
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = -1
Query: 293 GINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAV 350
G NL++ +L D+ L + F PFG + S KV + SK FGFV + SP A A+
Sbjct: 206 GSNLFIYHLPQEFGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAI 27
Query: 351 SEMNG 355
S MNG
Sbjct: 26 SSMNG 12
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = -1
Query: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETEEAAERAIEK 157
N+FI +L + ++ L F FGN++S KV D+ N SK GFV +++ +A+ AI
Sbjct: 200 NLFIYHLPQEFGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISS 21
Query: 158 MNGMLL 163
MNG L
Sbjct: 20 MNGFRL 3
>28455
Length = 573
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = -1
Query: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG-SKGHGFVHFETEEAAERAIEKMN 159
+F+KNL T +AL F G + ++V+ +G SKG +V FETEE A +A+ K +
Sbjct: 534 LFVKNLPFTCSAEALETIFKEHGKVKDVRLVTYRSGASKGLAYVEFETEEMATQAVMKTD 355
Query: 160 GMLLNDRKVFVG 171
G+ + D + V
Sbjct: 354 GLQVGDHMISVA 319
>31310
Length = 469
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = -3
Query: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSD--ENGSKGHGFVHFETEEAAERAIEKM 158
+++ ++N I + F FG I S + D N KG F+ ++ EAA+ A+E+M
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 159 NGMLLNDRKVFVGR 172
NG+++ R + VGR
Sbjct: 137 NGVMIGGRNIKVGR 96
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Frame = -3
Query: 10 MASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERAL 69
M +YVG ++ ++ E + + F GPI S+ + D IT + G++ + ++ P A+ AL
Sbjct: 326 MCRIYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLAL 147
Query: 70 DTMNFDVIKGKPVRI 84
+ MN +I G+ +++
Sbjct: 146 EQMNGVMIGGRNIKV 102
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = -3
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAVSEM 353
+YV +++ I ++ +++ F PFG I S + + + KGF F+ + PE A A+ +M
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 354 NGRIVATKPLYV 365
NG ++ + + V
Sbjct: 137 NGVMIGGRNIKV 102
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 193 VYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEXXXXXX-XXXXXXERHEDAQKAVDEM 251
+Y+ + + ++T+ F FG I SV + D + E AQ A+++M
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 252 NGKELNGKHIYVGR 265
NG + G++I VGR
Sbjct: 137 NGVMIGGRNIKVGR 96
>28605
Length = 697
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -3
Query: 101 VFIKNLNKTIDNKA-LYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMN 159
VF+ NL+ ++A L + FS +GN+L V + +GFV F TEE RA+E MN
Sbjct: 563 VFVANLSSDETSEAELQELFSKYGNVLDTLVHHNR-----YGFVQFSTEEEGRRAVEAMN 399
Query: 160 GMLLNDRKV 168
G + +K+
Sbjct: 398 GYMFYRKKL 372
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -3
Query: 287 KSIRYQGINLYVKNLD-DGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEE 345
K ++ ++V NL D + LQ+ FS +G + T V +GFV FS+ EE
Sbjct: 590 KEPKFLNSRVFVANLSSDETSEAELQELFSKYGNVLDTLV-----HHNRYGFVQFSTEEE 426
Query: 346 ATKAVSEMNGRIVATKPL 363
+AV MNG + K L
Sbjct: 425 GRRAVEAMNGYMFYRKKL 372
>13457
Length = 4857
Score = 33.5 bits (75), Expect(2) = 2e-05, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 292 QGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE 328
+G NL++ +L D L + F PFG + S KV +
Sbjct: 2428 EGCNLFIYHLPQXXGDAELAQMFVPFGNVISAKVYVD 2318
Score = 33.1 bits (74), Expect(2) = 2e-05, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 335 FGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAH 377
FGFV F +P A A+ MNG + K L V L + K+ + +
Sbjct: 2294 FGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 2166
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -1
Query: 85 MWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG-SKGHGFV 143
+W + P + +F+ LNK + + F +G I C ++ D+NG SKG FV
Sbjct: 3450 VWCRLTPKMTIGEDRKLFVGMLNKQQTEEDVRQLFHPYGAIEECTILRDQNGNSKGCAFV 3271
Query: 144 HFETEEAAERAIEKMNG 160
+ T A+ AI ++G
Sbjct: 3270 KYSTHSEAQAAINALHG 3220
Score = 30.0 bits (66), Expect(2) = 0.013, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSD 133
N+FI +L + + L F FGN++S KV D
Sbjct: 2419 NLFIYHLPQXXGDAELAQMFVPFGNVISAKVYVD 2318
Score = 26.6 bits (57), Expect(2) = 0.013, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 140 HGFVHFETEEAAERAIEKMNGMLLNDRKV 168
GFV F+ +A+ AI+ MNG + +++
Sbjct: 2294 FGFVSFDNPASAQAAIQAMNGFQIGMKRL 2208
>03200
Length = 657
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Frame = -1
Query: 292 QGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVS 351
+G +YV + G+ ++ L+ FS FG I + + R + GFV F E A +A++
Sbjct: 492 KGHTVYVHGI--GVTEDILKSAFSNFGNIVNINI----ERERNNGFVTFEKMESADQAIA 331
Query: 352 EMNGRIVATKPLYVALAQRK 371
MNG +++ L V +A+R+
Sbjct: 330 NMNGSMISNVQLKVMMARRQ 271
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -1
Query: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNG 160
V++ + T D L FS FGNI++ + + N +GFV FE E+A++AI MNG
Sbjct: 480 VYVHGIGVTED--ILKSAFSNFGNIVNINIERERN----NGFVTFEKMESADQAIANMNG 319
Query: 161 MLLND--RKVFVGR 172
++++ KV + R
Sbjct: 318 SMISNVQLKVMMAR 277
>19868
Length = 434
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Frame = +2
Query: 13 LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTM 72
++VG L + L + F+ G I + V +D TRRS G+ + F PA ++ L
Sbjct: 5 MFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQA 184
Query: 73 NFDVIKGKPV--RIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKV 130
+ + GK + ++ + +R + +F+ L+ + + + F FG I +
Sbjct: 185 THE-LDGKKIDPKVAFPRRAHPRMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAML 361
Query: 131 VSDE--NGSKGHGFV 143
+ D+ N +G GFV
Sbjct: 362 MFDKQTNRHRGFGFV 406
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +2
Query: 295 NLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATK---- 348
++V L E L+ F+ FG IT VM + RS+GFGF+ F P K
Sbjct: 2 KMFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQ 181
Query: 349 AVSEMNGRIVATKPLYVALAQRKEERQAHLTNQ 381
A E++G+ + K VA +R R T +
Sbjct: 182 ATHELDGKKIDPK---VAFPRRAHPRMVTRTKK 271
>01278
Length = 1082
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +2
Query: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERAL 69
A++ V +L D E+ L E F GPI I + +D +T +S G+A +NF + DA RA+
Sbjct: 635 ATIRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDASRAI 811
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 94 RRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETEEAA 151
R+ + + NL++ L + F FG I + D+ SKG F++F E A
Sbjct: 620 RKDEAATIRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDA 799
Query: 152 ERAIEKMNGM 161
RAI ++G
Sbjct: 800 SRAIAGVSGF 829
>28652
Length = 918
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Frame = -2
Query: 9 PMASLYVGDLHPDVTEAMLYEKFSS-AGPILSIRVY--RDVITRRSLGYASVNFE---QP 62
P L+VG++ T+ + ++F + ++ + VY D ++ G+A + ++
Sbjct: 494 PNLRLFVGNIPKSKTKEEILKEFEKHSEGLMDVIVYGSADNPKLKNRGFAFLEYDTHKNA 315
Query: 63 ADAERALDTMNFDVIKGKPVRIMWS--QRDPSLRR-SGVGNVFIKNLNKTIDNKALYDTF 119
+ A+R T F V + V + W+ Q +P+ S V ++++NL + L + F
Sbjct: 314 SAAKRRFTTGRFRVWQCD-VIVDWADLQEEPNEETMSKVKVLYVRNLTGDVTEDDLKEKF 138
Query: 120 SAFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFV 170
A+G + K + D +GFVH+E E A +A++ ++G + + ++ V
Sbjct: 137 GAYGKVERVKKIKD------YGFVHYEDREDALKALDDLHGEKIGNLEIDV 3
>03903
Length = 983
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = -1
Query: 296 LYVKNLDDGIDDERLQKEFSPF--------GTITSTKVMTEGGRSKGFGFVCFSSPEEAT 347
LY+KNL + +E L F + +I ++M EG R KG FV + E+A
Sbjct: 452 LYIKNLSKQVTEEDLHWVFGRYVNWDKEEEKSIFDIRLMKEG-RMKGQAFVTLGTEEQAR 276
Query: 348 KAVSEMNGRIVATKPLYVALAQ 369
KAV + N + KP+ V A+
Sbjct: 275 KAVKDTNAFVFKGKPIAVHFAR 210
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Frame = -1
Query: 193 VYIKNFGDRMDDETLNGLFGRF--------GQILSVKVMTDEXXXXXXXXXXXXERHEDA 244
+YIKN ++ +E L+ +FGR+ I +++M + E E A
Sbjct: 452 LYIKNLSKQVTEEDLHWVFGRYVNWDKEEEKSIFDIRLMKEGRMKGQAFVTLGTE--EQA 279
Query: 245 QKAVDEMNGKELNGKHIYV 263
+KAV + N GK I V
Sbjct: 278 RKAVKDTNAFVFKGKPIAV 222
>15371
Length = 383
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2
Query: 293 GINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSP 343
G NL++ +L D+ L + F PFG + S KV + SK FGFV + SP
Sbjct: 160 GANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSP 2
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -2
Query: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFET 147
N+FI +L + ++ L F FGN++S KV D+ N SK GFV +++
Sbjct: 154 NLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDS 5
>20169
Length = 1364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = -1
Query: 13 LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTM 72
+YVG+L + L +KF+ GP+ ++ + RR G+A V FE DAE A+ +
Sbjct: 1064 VYVGELGHGCAKQELEDKFAKYGPLKNV-----WVARRPAGFAFVEFEDNRDAEDAVQAL 900
Query: 73 NFDVIKGKPVRIMWS 87
+ I G+ R+ S
Sbjct: 899 DGARINGRRARVEMS 855
>33516
Length = 449
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMT--EGGRSKGFGFVCFSSP 343
++V L D + LQ FS FG IT VM + G+S+GFGFV F P
Sbjct: 160 IFVGGLSWDTDQDSLQGYFSQFGEITDCIVMMNQQTGKSRGFGFVSFKDP 309
>02347
Length = 928
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = -3
Query: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALD 70
+YVGDL PD +E + F+ G + ++ V R G+A V FE DA+ A+
Sbjct: 746 GKIYVGDLPPDASEKEVERAFNYYGHLRNVWV-----ARNPPGFAFVEFEDTRDADDAVR 582
Query: 71 TMNFDVIKGKPVRI 84
++ V+ G VR+
Sbjct: 581 ALDGTVVCGNRVRV 540
>00029
Length = 2204
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -3
Query: 294 INLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEM 353
I +++ NL D D E L+ F +G++ V+ K FGFV EA A+S +
Sbjct: 2136 IKIFIGNLGDDTDPEELRALFEKYGSVAECDVL------KNFGFVHMVKKGEADDAISNL 1975
Query: 354 NGRIVATKPLYVALA 368
NG + + + V L+
Sbjct: 1974 NGYNIGGQRMRVELS 1930
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = -3
Query: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNG 160
+FI NL D + L F +G++ C V+ K GFVH + A+ AI +NG
Sbjct: 2130 IFIGNLGDDTDPEELRALFEKYGSVAECDVL------KNFGFVHMVKKGEADDAISNLNG 1969
Query: 161 MLLNDRKVFV 170
+ +++ V
Sbjct: 1968 YNIGGQRMRV 1939
>00302
Length = 927
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -1
Query: 103 IKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG--SKGHGFVHFETEEAAERAIEKMNG 160
I L+ + L + F +G+I +VV D S+G FV+F++ E A A ++ NG
Sbjct: 453 IFGLSLYTQERGLREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAKDRCNG 274
Query: 161 MLLNDRKVFV 170
+ ++ RK+ V
Sbjct: 273 IEIDGRKIRV 244
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 293 GINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAV 350
G++LY + + L++ F +G I+ +V+ + GRS+GF FV F S E+A +A
Sbjct: 447 GLSLYTQ-------ERGLREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAK 289
Query: 351 SEMNGRIVATKPLYVALA 368
NG + + + V +
Sbjct: 288 DRCNGIEIDGRKIRVDFS 235
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 207 LNGLFGRFGQILSVKVMTD-EXXXXXXXXXXXXERHEDAQKAVDEMNGKELNGKHIYV 263
L +FGR+G I V+V+ D + + EDA +A D NG E++G+ I V
Sbjct: 417 LREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAKDRCNGIEIDGRKIRV 244
>35379
Length = 534
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 118 TFSAFGNILSCKVVSDE-NGSKGHGFVHFETEEAAERAIEK-MNGMLLNDRKVFVG 171
FSAFG + K E KG+GFV FE +E A+R I+K + ++ DRK+ +G
Sbjct: 43 VFSAFGPVKDAK**QTELECPKGYGFVTFENQEDADRIIKKEADNLIFKDRKLNIG 210
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 314 FSPFGTITSTKV-MTEGGRSKGFGFVCFSSPEEATKAV-SEMNGRIVATKPLYVALAQRK 371
FS FG + K TE KG+GFV F + E+A + + E + I + L + A RK
Sbjct: 46 FSAFGPVKDAK**QTELECPKGYGFVTFENQEDADRIIKKEADNLIFKDRKLNIGPAVRK 225
Query: 372 E 372
+
Sbjct: 226 Q 228
>02064
Length = 1195
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +1
Query: 298 VKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMN--- 354
VKNL I + L++ F G + +++ + GRS G G V F++ ++A +A++ M+
Sbjct: 91 VKNLPYAITWQDLRERFQEIGVVKYSEITMDKGRSTGQGLVRFATEDDAVRAINSMDRTR 270
Query: 355 --GRIVATKPLYVALAQR 370
GR + K +Y QR
Sbjct: 271 YEGRTIGVK-MYRG*WQR 321
>31618
Length = 716
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAVSEM 353
L+V L ++ L+ F +G I S V T+ GRS+GF F+ F++ EA VS
Sbjct: 298 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTN-TEAIDQVSAA 474
Query: 354 NGRIVATKPLYVALAQRKEERQA---HLTNQYIQRMASVRSGPNPVN 397
I+ +K + +K+ R A L+ QR+A +S P VN
Sbjct: 475 EEHIINSK----KVDPKKKPRLAMARFLSVA*PQRLAMRKSKPTSVN 603
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 13 LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNF 59
L+VG L + TE L + F G I SI V D T RS G+A + F
Sbjct: 298 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVF 438
>00556
Length = 2189
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 79/200 (39%), Gaps = 33/200 (16%)
Frame = +3
Query: 6 PGCPMAS----LYVGDLHPDVTEAMLYEKF-----------SSAGPILSIRVYRDVI--- 47
PG M+ LYVG++ VTE + + F + P++++ + D
Sbjct: 402 PGSAMSRQARRLYVGNIPFGVTEESMMDFFNHQMKITGLAQAEGDPVIAVHINLDKNFAF 581
Query: 48 --------TRRSLGYASVNFE-QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGV 98
T ++L + + +E QP R D + P +Q P + + V
Sbjct: 582 LELRSVDETTQALAFDGIAYETQPLKIRRPSDYKPLPGLSENP-----TQAVPGVVSTVV 746
Query: 99 GN----VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG--SKGHGFVHFETEEAAE 152
+ +F+ L + + + +FG + S +V D SKG F + +
Sbjct: 747 QDSDHKIFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTD 926
Query: 153 RAIEKMNGMLLNDRKVFVGR 172
+A +NGM L D+K+ V R
Sbjct: 927 QACAGLNGMQLGDKKLIVQR 986
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEG--GRSKGFGFVCFSSPEEATKAVSEM 353
+++ L + ++++++ FG + S ++ + G SKGF F + P +A + +
Sbjct: 765 IFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTDQACAGL 944
Query: 354 NGRIVATKPLYV 365
NG + K L V
Sbjct: 945 NGMQLGDKKLIV 980
>12506
Length = 1056
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 305 IDDERLQKEFSPFGTITSTKV--MTEGGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKP 362
+DD+ L F PFG I ++ E + +GF F+ F E+A A+ MN + +
Sbjct: 1030 VDDKVLHAAFLPFGDIVDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNMNESELFGRT 851
Query: 363 LYVALAQ 369
+ V LA+
Sbjct: 850 IRVNLAK 830
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -3
Query: 201 RMDDETLNGLFGRFGQILSVKVMTD-EXXXXXXXXXXXXERHEDAQKAVDEMNGKELNGK 259
+DD+ L+ F FG I+ +++ D E E EDA A+D MN EL G+
Sbjct: 1033 EVDDKVLHAAFLPFGDIVDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNMNESELFGR 854
Query: 260 HIYVGRAQ 267
I V A+
Sbjct: 853 TIRVNLAK 830
>02809
Length = 1475
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = -1
Query: 13 LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTM 72
+YVG+L + L +KF+ GP+ ++ V RR G+A V FE DAE A+ +
Sbjct: 1328 VYVGELGHGCAKQELEDKFAKYGPLKNVWV-----ARRPAGFAFVEFEDNRDAEDAVQAL 1164
Query: 73 N 73
+
Sbjct: 1163 D 1161
>03000
Length = 778
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 7/187 (3%)
Frame = +3
Query: 182 ELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEXXXXXXXXXXXXERH 241
+L ++F ++I D+++L F +G+I+ VM D +
Sbjct: 60 DLDPNAEQFRKLFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFIT--Y 233
Query: 242 EDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGIN-LYVKN 300
+DA+ ++D+ R K D R + K + +S Q + ++V
Sbjct: 234 KDAE-SIDQAQ----------ANRPHKIDGREVDTKRAMPREESGRSEVQQSVKKMFVGG 380
Query: 301 LDDGIDDERLQKEFSPFGTITSTKVMTEGG--RSKGFGFVCFSSPEEATKAV----SEMN 354
+ + ++ ++ F+ FG IT ++ + G +++GF FV F + KAV ++N
Sbjct: 381 VKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFCFVTFGDHDSVDKAVLKKRHDLN 560
Query: 355 GRIVATK 361
GR V K
Sbjct: 561 GRQVEVK 581
>32386
Length = 674
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGG--RSKGFGFVCFSSPEEATKAVS-- 351
L++ L D++ L+ F +G I VM + RS+GFGF+ + E +A +
Sbjct: 307 LFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQAQANR 486
Query: 352 --EMNGRIVATK 361
+++GR V TK
Sbjct: 487 PHKIDGREVDTK 522
>03059
Length = 1154
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = -2
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE---GGRSKGFGFVCFSSPEEATKAVSE 352
++V L ++ + +Q+ FS +GTI + + SKG +V + +PE+A KAV
Sbjct: 664 VHVGRLTRNVNKDHIQEIFSLYGTIKFIDLPNDRIHPNTSKGHAYVEYENPEDAEKAVKY 485
Query: 353 MNG 355
M+G
Sbjct: 484 MDG 476
>00781
Length = 3170
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTIT--STKVMTEGGRSKGFGFVCFSSPEEATKAVSEM 353
+YV+ E + + FS GT+T S KG+ FV F SPEEA KAV +
Sbjct: 2714 VYVEGFHKFTSREWISRMFSKCGTVTYVSLPCFKTTREIKGYAFVEFQSPEEAVKAVQML 2535
Query: 354 N 354
N
Sbjct: 2534 N 2532
>32733
Length = 709
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 106 LNKTIDNKALYDTFSAFGNILSCKVVSDENG-SKGHGFVHFETEEAAERAIEKMN 159
L+K + + F +FG+I C V+ D NG S+G F+ F + + A +I+ M+
Sbjct: 487 LSKKLSENDVRMLFESFGSIDDCTVLRDSNGTSRGCAFITFASRQCAMNSIKGMH 651
>09736
Length = 1319
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 325 VMTEGGRSKGFGFVCFSSPEEATKAVSEMNGRI-VATKPLYVALAQRKEERQAH 377
V+ G+SKGFGFV FS + +A+ EM + +P+ V LA K H
Sbjct: 1291 VLDASGKSKGFGFVRFSEENDQQRALVEMQHMTGIGRRPIKVGLAAPKRGHGFH 1130
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 122 FGNILSCKVVSDENG-SKGHGFVHFETEEAAERAIEKMNGML-LNDRKVFVG 171
+ ++ KVV D +G SKG GFV F E +RA+ +M M + R + VG
Sbjct: 1318 YRSVRGAKVVLDASGKSKGFGFVRFSEENDQQRALVEMQHMTGIGRRPIKVG 1163
>02091
Length = 2031
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = -2
Query: 518 QHLNAQLAQQPAVCI-----QGQEPWTASMLVTAPQEPKQMLGERLFPLIQAMHPTLAGK 572
QH + Q P C QGQ A++ PQ QM+GE+LF L+ +P
Sbjct: 1463 QHRHXQETAGPGDCCLSSPCQGQNE-AATVAEAHPQVQTQMIGEQLFSLMSDXYPY---- 1299
Query: 573 ITGMLLDIDNSEPLRMLESPVSRCSRAEEAVATLQAHQVK 612
T +L DNSE LR++ + + A+ L + Q+K
Sbjct: 1298 PTDXMLKFDNSELLRIMLECQQSVNYRDAAMVMLVSSQLK 1179
>08670
Length = 1307
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +2
Query: 5 DPGCP--MASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQP 62
DP P + +L+VG++ P VTE L + F+ GP+ S+R+ + A +N++
Sbjct: 929 DPKNPEGLTALWVGNVLPQVTEKRLTQMFAKHGPVASVRMLPEKYC------AFINYKLK 1090
Query: 63 ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIK 104
A RA+ + +G+ + I R P + GN+ ++
Sbjct: 1091 ESAGRAMQYLQNQECEGQHLLI----RFPDNPINPTGNITLR 1204
>23322
Length = 471
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = -2
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGG--RSKGFGFVCFSSPEEATKAV--- 350
++V + + ++ ++ F+ FG IT ++ + G +++GF FV F + KAV
Sbjct: 404 MFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFCFVTFGDHDSVDKAVLKK 225
Query: 351 -SEMNGRIVATKP 362
++NGR V K
Sbjct: 224 RHDLNGRQVEVKK 186
>25950
Length = 417
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -2
Query: 295 NLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAVSE 352
++YV N+D G E L+ F GTI ++ G KGF ++ F S E A++
Sbjct: 278 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALA- 102
Query: 353 MN 354
MN
Sbjct: 101 MN 96
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = -2
Query: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
S+YVG++ + L F G I + + + G+A + F E AL
Sbjct: 278 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETAL-A 102
Query: 72 MNFDVIKGKPVRIM 85
MN + +G+ +++M
Sbjct: 101 MNETLFRGRQIKVM 60
>26197
Length = 1365
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = -2
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAVS-- 351
++V L + L++ F FG +TS + T+ G+S+GFGFV F V
Sbjct: 1292 IFVGGLSWETSSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKEAVTVDAVVKNK 1113
Query: 352 --EMNGRIVATKP 362
++ GR + KP
Sbjct: 1112 EHKLQGRKIDPKP 1074
>15503
Length = 570
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +1
Query: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNG 160
+++KNL I + +YD F +G I + V + +KG FV +E A+ A + ++G
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIR-VGNTPETKGTAFVVYEDIFDAKNACDHLSG 330
Query: 161 MLLNDRKVFVGRFKSQK 177
+ +R + V ++S +
Sbjct: 331 FNVCNRYLVVLYYQSTR 381
Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMNG 355
LYVKNL I E + F +G I +V +KG FV + +A A ++G
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIRV-GNTPETKGTAFVVYEDIFDAKNACDHLSG 330
Query: 356 RIVATKPLYVALAQ 369
V + L V Q
Sbjct: 331 FNVCNRYLVVLYYQ 372
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 13 LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTM 72
LYV +L +T +Y+ F G I IRV T + G A V +E DA+ A D +
Sbjct: 154 LYVKNLPYKITAEEMYDIFGKYGAIRQIRVGN---TPETKGTAFVVYEDIFDAKNACDHL 324
Query: 73 N 73
+
Sbjct: 325 S 327
>03406
Length = 1292
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +3
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATKAVS-- 351
++V L + L++ F FG +TS + T+ G+S+GFGFV F V
Sbjct: 246 IFVGGLSWETXSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKEAATVDAVVKNK 425
Query: 352 --EMNGRIVATKPLYVALAQRK 371
++ GR + KP RK
Sbjct: 426 EHKLQGRKIDPKPANPRKGMRK 491
>39789
Length = 361
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVS---- 351
L+V NL D L+ F P T + + +GFGFV FS+P++A A
Sbjct: 94 LFVGNLSYDTDQYSLKDAF-PGATAARIAKFQDTQKPRGFGFVEFSTPDDAASAFDSGER 270
Query: 352 EMNGRIV 358
E++GR V
Sbjct: 271 EVDGRQV 291
>28372
Length = 398
Score = 33.9 bits (76), Expect = 0.20, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2
Query: 138 KGHGFVHFETEEAAERAIEKMNGMLLNDRKVFV 170
+G GFV F AERA +KMNG ++ RK+ V
Sbjct: 259 QGFGFVTFAHSAEAERARDKMNGTVVEGRKIEV 161
Score = 32.3 bits (72), Expect = 0.55, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 333 KGFGFVCFSSPEEATKAVSEMNGRIVATKPLYV 365
+GFGFV F+ EA +A +MNG +V + + V
Sbjct: 259 QGFGFVTFAHSAEAERARDKMNGTVVEGRKIEV 161
>10194
Length = 1278
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = -3
Query: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
S++VG+L D+ E + F G + +IRV RD T G + F+ AL
Sbjct: 403 SVFVGNLPFDIEEESVRSHFEDCGDVENIRVVRDRKTNLGKGICYILFKSADSVSLALKL 224
Query: 72 MNFDVIK 78
N ++ K
Sbjct: 223 NNSELEK 203
>11019
Length = 552
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 308 ERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSP 343
E L+ F FG I + VM + RS+GFGFV + P
Sbjct: 522 ETLRSYFEKFGEIKESMVMKDPTSKRSRGFGFVTYKDP 409
>12350
Length = 975
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = -2
Query: 288 SIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEE 345
S R + +L V L ++ L+ FS FG + +V + G+SKGFGF+ F+ E
Sbjct: 638 SSRQKCSDLIVLGLPWKSTEDDLRSYFSQFGDLLMVQVKKDPKTGQSKGFGFIRFAEYES 459
Query: 346 ATKAVSE---MNGR 356
K +++ ++GR
Sbjct: 458 QLKCMAQRHMIDGR 417
>25632
Length = 864
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 122 FGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNG 160
+G + C V+ K +GFVH T+ A AI +NG
Sbjct: 698 YGTVEECDVL------KNYGFVHMPTKSEASAAITNLNG 600
>03097
Length = 1401
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 317 FGTITSTKVMTE-GGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQ 375
+G I + G G +V F E+A KAV+++N R +P+Y L + R+
Sbjct: 187 YGEIEEMNICDNLGDHLVGNVYVKFRKEEDADKAVADLNNRWFNGRPIYAELTPVTDFRE 366
Query: 376 A 376
A
Sbjct: 367 A 369
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +1
Query: 200 DRMDDETLNGLFGRFGQILSVKVMTDEXXXXXXXXXXXXERHEDAQKAVDEMNGKELNGK 259
D +E L ++G+I + + + + EDA KAV ++N + NG+
Sbjct: 145 DDFFEEIFIELAEKYGEIEEMNICDNLGDHLVGNVYVKFRKEEDADKAVADLNNRWFNGR 324
Query: 260 HIY 262
IY
Sbjct: 325 PIY 333
>12096
Length = 1585
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 330 GRSKGFGFVCFSSPEEATKAVSEMNGRIV 358
G S+GFGFV F S EA + + G++V
Sbjct: 1109 GASRGFGFVEFQSQSEAQRWMDHNQGQVV 1023
>11579
Length = 1307
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 51 SLGYASVNFEQPADAERALDTMNFDVIKGKPVRIMWSQ 88
S G+A V F DAE A+D+M+ ++ G+ VR ++
Sbjct: 3 SRGFAFVRFYDRRDAEDAMDSMDGALLDGREVRCQMAR 116
>15931
Length = 447
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -1
Query: 317 FGTITSTKVMTEG-GRSKGFGFVCFSSPEEATKAV--SEMNGRIVATKPLYVALAQRKEE 373
FG +T EG GR SSP AT+AV S GR+ A +VAL Q EE
Sbjct: 306 FGVRGTTTWWQEG*GRQA-------SSPS-ATQAV*ASFAGGRVSAVATNHVALVQLAEE 151
Query: 374 RQAHLTNQYIQRMASVR 390
AH Q + R VR
Sbjct: 150 GMAHGLTQAVARADLVR 100
>04988
Length = 705
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = -3
Query: 293 GINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSE 352
G +Y+ L ++ +++ F +G + + G+GFV F +A AV E
Sbjct: 655 GTRVYIGRLPYQAREKDIERFFRGYGRVNDIML------KNGYGFVEFEDFRDADDAVYE 494
Query: 353 MNGRIVATKPLYVALAQ 369
+NG+ + + + + A+
Sbjct: 493 LNGKDLCGERVIIEHAR 443
>23720
Length = 739
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = -1
Query: 293 GINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSE 352
G +Y+ L ++ +++ F +G + + G+GFV F +A AV E
Sbjct: 688 GTRVYIGRLPYQAREKDIERFFRGYGRVNDIML------KNGYGFVEFEDFRDADDAVYE 527
Query: 353 MNGRIVATKPLYVALAQ 369
+NG+ + + + + A+
Sbjct: 526 LNGKDLCGERVIIEHAR 476
>00741
Length = 1846
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 337 FVCFSSPEEATKAVSEMNGRIVATKPL 363
FV FS EE KAVS +NGR + L
Sbjct: 1430 FVEFSKQEELEKAVSSLNGRFFGGRVL 1350
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|170763470|ref|NP_056616.2| patatin-like phospholipase
domain containing 6 [Mus musculus]
(1327 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07814 536 e-152
27853 325 7e-89
20517 39 0.010
08195 35 0.30
27710 33 0.74
07494 33 1.1
32085 32 2.0
01994 32 2.2
>07814
Length = 1888
Score = 536 bits (1382), Expect = e-152, Method: Compositional matrix adjust.
Identities = 239/381 (62%), Positives = 300/381 (78%), Gaps = 1/381 (0%)
Frame = -3
Query: 879 WCSGHLHLRCPRRLFSRRSPAKLHELYEKVFSRRADRHSDFSRLARVLTGNTIALVLGGG 938
WCS H+RC +R+FSRR P K+ ++Y+K+F ADR +D SRLAR LTG +I LVLGGG
Sbjct: 1886 WCSSFHHIRCNKRVFSRRPPDKMEQIYKKLFESEADRMTDVSRLARFLTGTSIGLVLGGG 1707
Query: 939 GARGCSHIGVLKALEEAGVPVDLVGGTSIGSFIGALYAEERSASRTKQRAREWAKSMTSV 998
GARG +H+G++KA++EAG+P+D++GGTS+GSFIGAL+AEER + R +EWA MTS+
Sbjct: 1706 GARGVAHVGMIKAMQEAGIPIDMIGGTSMGSFIGALWAEERQYPKFNIRGKEWAMKMTSI 1527
Query: 999 LEPVLDLTYPVTSMFTGSAFNRSIHRVFQDKQIEDLWLPYFNVTTDITASAMRVHKDGSL 1058
+ VLDLTYP TSMFTGS+FN +I F +QIEDLW+PYF VTTDIT+S+MR+H GSL
Sbjct: 1526 WKKVLDLTYPYTSMFTGSSFNETIESTFPSRQIEDLWIPYFCVTTDITSSSMRIHTTGSL 1347
Query: 1059 WRYVRASMTLSGYLPPLCDPKDGHLLMDGGYINNLPADIARSMGAKTVIAIDVGSQDETD 1118
WRYVRASM+LSGYLPPLCDP DGHLL+DGGY+NNLPAD+ R+MGA+T+ AIDVGSQDE++
Sbjct: 1346 WRYVRASMSLSGYLPPLCDPNDGHLLLDGGYVNNLPADVLRTMGARTIFAIDVGSQDESN 1167
Query: 1119 LSTYGDSLSGWWLLWKRLNPWADKVKVPDMAEIQSRLAYVSCVRQLEVVKSSSYCEYLRP 1178
L+ YGD LSGWWLLWKR NPW+ KVKVPDM EIQSRLAYVSC RQLEVVK+S +CEY+RP
Sbjct: 1166 LTNYGDRLSGWWLLWKRWNPWSSKVKVPDMTEIQSRLAYVSCTRQLEVVKNSDWCEYIRP 987
Query: 1179 SIDCFKTMDFGKFDQIYDVGYQYGKAVFGGWTRGEVIEKMLTDRRSTDLNESRRADILAF 1238
ID + T+ FG +D I DVGY +G + GW +G +I+ + T+++ D RA
Sbjct: 986 PIDKYGTLQFGSYDDIVDVGYNHGTTLLSGWIKGGLIKNLFTEKQKVDTRAPERAQQTKL 807
Query: 1239 PSSG-FTDLAEIVSRIEPPTS 1258
P FTDLAE+VSRI+ P S
Sbjct: 806 PVMAYFTDLAELVSRIDKPHS 744
>27853
Length = 864
Score = 325 bits (834), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 163/286 (56%), Positives = 202/286 (70%), Gaps = 4/286 (1%)
Frame = +2
Query: 526 FVAQPGELVGQLAVLTGEPLIFTLRAQRDCTFLRISKSHFYEIMRAQPSVVLSAAHTVAA 585
F PGE+ L VLTGEP FT RA+ D + I+K++FY +MR +P +VL+
Sbjct: 2 FSVTPGEMTDMLPVLTGEPSFFTTRAKTDMLLVLITKANFYSMMREEPFIVLNLGRMTVR 181
Query: 586 RMSPFVRQMDFAIDWTAVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYG 645
RMSPFVRQ+DFA+DW EAG+AL+RQGD SD YIVL GRLRSVI GKKE+VGEYG
Sbjct: 182 RMSPFVRQIDFALDWQMTEAGKALFRQGDNSDSVYIVLTGRLRSVITLLGGKKEVVGEYG 361
Query: 646 RGDLIGVVEALTRQPRATTVHAVRDTELAKLPEGTLGHIKRRYPQVVTRLIHLLSQKILG 705
RG+L+G+VE LT RATT A+RDTE+AK+PE L IK +YPQVVTRLIHLL Q+ILG
Sbjct: 362 RGELVGIVEVLTHTERATTNMAIRDTEVAKIPEELLTLIKLKYPQVVTRLIHLLGQRILG 541
Query: 706 NLQQLQGPFPGSGLSVPQHSE--LTNPA--SNLSTVAILPVCAEVPMMAFTLELQHALQA 761
NLQ + ++ E L NPA +NL+TVA++P VP+ FT+ELQHAL A
Sbjct: 542 NLQNRNTVALDQSMPFSRNGEGTLENPAIVNNLATVAVVPASESVPVDNFTMELQHALSA 721
Query: 762 IGPTLLLNSDVIRALLGASALDSIQEFRLSGWLAQQEDAHRIVLYQ 807
IG T+ L SD+I++ LGA+ALD + EFRLS WL QQED R+VLYQ
Sbjct: 722 IGSTIRLTSDIIKSQLGATALDGVNEFRLSSWLNQQEDIQRMVLYQ 859
>20517
Length = 749
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 15/148 (10%)
Frame = +3
Query: 501 SLHFVLWGCLHVYQRMIDKAEEVCLFVAQPGELVGQLAVLTGEPLIFTLRAQRDCTFLRI 560
S +F+L G + V Q + L G G+LAV+TG T+ + L I
Sbjct: 18 SFYFILSGTVVVTQFERQYSTTRTLVTLDQGMSFGELAVITGSRRQATVSTMTEVELLCI 197
Query: 561 SKSHFYEI-MRAQPSVVLSAAHTVAARMSPFVRQMDFAIDWTA--------------VEA 605
S F +I M ++ H + F+R +DF W
Sbjct: 198 SAKDFEDIFMAGGRKIITDPDH------NKFLRSVDFLKAWPVQQLAQHPHACMFHYFNR 359
Query: 606 GRALYRQGDRSDCTYIVLNGRLRSVIQR 633
G+ L R + SD YIV +G L SV+++
Sbjct: 360 GQVLVRDSNNSDWIYIVKSGSL-SVMKK 440
>08195
Length = 2165
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -3
Query: 602 AVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTRQPR 661
+V+ G + QGD D Y++ +G + G+ +LVG Y G + + PR
Sbjct: 1560 SVQPGEHIIDQGDDGDNFYVIDSGTYDIYVDV-EGQAKLVGNYDNSGFFGELALMYNMPR 1384
Query: 662 ATTVHA 667
A T+ A
Sbjct: 1383 AATIIA 1366
>27710
Length = 429
Score = 33.1 bits (74), Expect = 0.74, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Frame = +2
Query: 492 IARQGDQDVSLHFVLWGCLHVYQRMIDKAEEVCLFVAQPGELVGQLAVLTGEPLIFTLRA 551
I +QGD+ + + + G + V+ E+ +++ G G+LA++ G P T+RA
Sbjct: 8 IIQQGDEGDNFYVIDVGEVDVFVN-----SELVTTISEGGSF-GELALIYGTPRAATVRA 169
Query: 552 QRDCTFLRISKSHFYEIMRAQPSVVLSAAHTVAARMSPFVRQMDF--------AIDWTAV 603
+ D I + + I+ +R+S + +D +++ A
Sbjct: 170 KSDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRVS-ILESLDKWERLTVADSLETCAF 346
Query: 604 EAGRALYRQGDRSDCTYIVLNG 625
+ G + +QG D YI+L G
Sbjct: 347 DDGETIVKQGAAGDDFYIILEG 412
>07494
Length = 512
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 1216 EKMLTDRRSTDLNESRRADILAFPSSG-FTDLAEIVSRIEPPTS 1258
+ + T+++ D RA P FTDLAE+VSRI+ P S
Sbjct: 2 KNLFTEKQKVDTRAPERAQQTKLPVMAYFTDLAELVSRIDKPHS 133
>32085
Length = 1641
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 146 RVLGHFEKPLFLELCRHM-VFQRLGQGDYVFRPGQPDASI 184
R + HF +PLF C HM ++ + YV P I
Sbjct: 522 RCIRHFTRPLFAHTCTHMFIYMQTSNSSYVLTPAAHSGQI 403
>01994
Length = 1090
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 330 DTSKETSGRPLDSIGAPLPGPAGDPVKPTSLEAPPAPLLSR 370
D + S P+D PLP A PV PT ++ P P L R
Sbjct: 471 DAPPDYSTVPMDFEPVPLPKTASVPVNPTKVKLNPRPWLER 349
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|125656173|ref|NP_579938.2| acetyl-Coenzyme A
carboxylase alpha [Mus musculus]
(2345 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27198 412 e-150
30077 252 1e-66
15060 155 2e-37
31960 34 0.84
27046 33 1.3
22538 30 9.4
>27198
Length = 1148
Score = 412 bits (1058), Expect(2) = e-150, Method: Compositional matrix adjust.
Identities = 191/261 (73%), Positives = 228/261 (87%)
Frame = +1
Query: 1672 DGRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVAANSGARIGLAEEIRH 1731
+GRDIIVI ND+T+RIGSFGPQEDLLF +ASE +R +G+PRI+++ANSGARIGLAEEI+
Sbjct: 364 EGRDIIVIANDMTWRIGSFGPQEDLLFKKASEYSRKKGLPRIFISANSGARIGLAEEIKS 543
Query: 1732 MFHVAWVDPEDPYKGYKYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGL 1791
+FHVAW +P+ P +G+KYLYL P ++K+VSA+NSV E ++DEGESRYKITDIIGKEEGL
Sbjct: 544 LFHVAWENPDKPDQGFKYLYLRPDEFKKVSAMNSVRAELIQDEGESRYKITDIIGKEEGL 723
Query: 1792 GAENLRGSGMIAGESSLAYDEVITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAG 1851
G ENLRGSGMIAGE+S AYDEV+TI+LVTCRAIGIGAYLVRLGQR IQVENSH+ILTGA
Sbjct: 724 GVENLRGSGMIAGETSAAYDEVVTINLVTCRAIGIGAYLVRLGQRVIQVENSHIILTGAS 903
Query: 1852 ALNKVLGREVYTSNNQLGGIQIMHNNGVTHSTVCDDFEGVFTVLHWLSYMPKSVHSSVPL 1911
ALNKVLGREVYTSNNQLGGIQIM+NNGVTH+ V DDF GV +LHWLSY+PK +P+
Sbjct: 904 ALNKVLGREVYTSNNQLGGIQIMYNNGVTHAVVQDDFAGVHKILHWLSYIPKHRXGPLPV 1083
Query: 1912 LNSKDPIDRIIEFVPTKAPYD 1932
DP++R +EF+PTK PY+
Sbjct: 1084 XEPVDPVERDVEFMPTKTPYN 1146
Score = 140 bits (353), Expect(2) = e-150, Method: Composition-based stats.
Identities = 63/119 (52%), Positives = 86/119 (72%)
Frame = +2
Query: 1552 TAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKL 1611
T QIMF++YG K+GPLHG+LI+TPY TKD LQ KRFQAQS GTTY+YD P++F+Q+L+
Sbjct: 2 TGQIMFESYGTKRGPLHGLLISTPYQTKDQLQLKRFQAQSSGTTYVYDYPDIFKQALLHQ 181
Query: 1612 WESMSTQAFLPSPPLPSDILTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMSLKSPEY 1670
W + + D +T E++LD + QL +RLPG N++GMV WKM+LK+PE+
Sbjct: 182 WTEYDKKHGVKEERNGLDFITCVEMMLDSREQLSPCHRLPGDNQVGMVVWKMTLKTPEF 358
>30077
Length = 575
Score = 252 bits (644), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 119/157 (75%), Positives = 136/157 (86%), Gaps = 2/157 (1%)
Frame = +1
Query: 1955 DYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKIIQQAG 2014
D GSF EI++PWA+TVVVGRARLGGIPVGVV VETRTVEL++PADPANLDSE KI+QQAG
Sbjct: 1 DDGSFDEILKPWAETVVVGRARLGGIPVGVVCVETRTVELTVPADPANLDSETKIVQQAG 180
Query: 2015 QVWFPDSAFKTYQAIKDFNREGLPLMVFANWRGFSGGMKDMYDQVLKFGAYIVDGLRECS 2074
QVWFPDSA+KT QAIKDF RE LPL++FANWRGFSGGMKDMYDQVLKFG+YIVD LRE
Sbjct: 181 QVWFPDSAYKTAQAIKDFAREQLPLIIFANWRGFSGGMKDMYDQVLKFGSYIVDALREYR 360
Query: 2075 QPVMVYIPPQAELRGGS--WVVIDPTINPRHMEMYAD 2109
QPV++YIPP ELRGG W ++ + P HM+M+AD
Sbjct: 361 QPVLIYIPPYGELRGGRG*WSIL--PLTPDHMDMFAD 465
>15060
Length = 935
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 167/342 (48%), Gaps = 4/342 (1%)
Frame = -2
Query: 208 WGHASENPKLPELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVD 267
+G SE P + + GI F+GP + + +GDK+ + A AG+ +P +
Sbjct: 934 YGFLSERPDFAQACVDAGIHFVGPSPEVVHRMGDKVEARQSAINAGVQVVPGT------- 776
Query: 268 WQENDFSKRILNVPQDLYEKGYVKDVDDGLKAAEEVGYPVMIKASEGGGGKGIRKVNN-- 325
G V ++ ++ +E G PV+ KA+ GGGG+G+R V N
Sbjct: 775 -------------------PGPVASAEEAMEFCKEHGLPVIFKAAFGGGGRGMRVVRNLE 653
Query: 326 --ADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRH 383
++F F + A +F+ + ++ RH+EVQ+L D+ GN I L+ RDCSVQRRH
Sbjct: 652 EVEENFNRAFSEALAAFGDGSLFIEKFIERPRHIEVQLLGDRTGNVIHLYERDCSVQRRH 473
Query: 384 QKXXXXXXXXXXXXXVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQV 443
QK V M AV+LAK VGY +AGTVE+L ++G +YF+E+N RLQV
Sbjct: 472 QKVVEIAPAPQLDSEVRTKMANDAVRLAKFVGYENAGTVEFLLDKNGQYYFIEVNARLQV 293
Query: 444 EHPCTEMVADVNLPAAQLQIAMGIPLFRIKDIRMMYGVSPWGDAPIDFENSAHVPCPRGH 503
EH TE V V+L AQ++IA G L D + + G
Sbjct: 292 EHTVTEQVTGVDLVQAQIRIAEGKTL-------------------SDLDLTQDKIQLNGC 170
Query: 504 VIAARITSENPDEGFKPSSGTVQELNFRSNKNVWGYFSVAAA 545
I R+T+E+P F+P +G ++ FRS + + A+A
Sbjct: 169 AIQCRMTTEDPARNFQPDTGRIE--VFRSGEGMGIRLDSASA 50
>31960
Length = 667
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -2
Query: 569 AISNMVVALKELSIRGDFRTTVEYLIKLLETESFQLNRIDTGWLD 613
A S M+ ALKE IRG +T + +L+ +L+ + F +DT ++D
Sbjct: 624 ASSKMLRALKEFRIRG-VKTNIPFLLNVLQNDKFLTGVVDTYFID 493
>27046
Length = 388
Score = 33.1 bits (74), Expect = 1.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 644 RNSISNFLHSLERGQ--VLPAHTLLNTVDVELIYEGIKYVLKVTRQSPNSYV 693
RN +S+ ++ +RG+ + H ++N +D+++ + + KVTR +PNSYV
Sbjct: 34 RNVLSDTEYTTKRGK*NCITEHNIINYLDMKMTSK----MFKVTRSTPNSYV 177
>22538
Length = 1255
Score = 30.4 bits (67), Expect = 9.4, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Frame = -3
Query: 1111 GHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQL 1170
G Q C E +K+ILS + + PN + Q R +L V+V+ + N ++H
Sbjct: 506 GQQACFEKTKKMILSAKVLVNYYPN-XPDNFQFQRKXSLVVHVKNTSVP---NCMEHTDR 339
Query: 1171 KDNTCV----VEFQFMLPTSHPNRGNIPT 1195
C VE+ L HP + PT
Sbjct: 338 NQPFCSFLHQVEYDTTLHCLHPFPKSSPT 252
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|19882201|ref|NP_598862.1| proteasome 26S non-ATPase
subunit 2 [Mus musculus]
(908 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05493 468 e-150
05545 288 e-100
32303 29 0.029
>05493
Length = 1292
Score = 468 bits (1203), Expect(2) = e-150, Method: Compositional matrix adjust.
Identities = 218/337 (64%), Positives = 275/337 (81%)
Frame = -2
Query: 49 DKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKE 108
D+QLQ+EL MLVERL E D LY+ ALE LR IR+STTSMTSVPKPLKFLRPHY +K+
Sbjct: 1165 DRQLQEELTMLVERLQEPDQRLYKAALESLRVLIRASTTSMTSVPKPLKFLRPHYDTMKQ 986
Query: 109 IYENMAPGENKCFAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAK 168
I+E + E K F ADIISVL MTMS R+ L Y+ GS+EE+ +WGHEYVRHLAG+VA+
Sbjct: 985 IHEKIRDQETKEFCADIISVLGMTMSEGRDSLHYKQQGSKEEIGAWGHEYVRHLAGQVAQ 806
Query: 169 EWQELDDAEKAQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAK 228
EWQ + +K ++ L+ L K+I+PY+M HNAE EACDL+ME+E++D+ + +DE AY++
Sbjct: 805 EWQVTGEDDKEMKDKLIGLAKQIIPYHMHHNAEAEACDLMMEVERLDLAMEYVDEQAYSR 626
Query: 229 VCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDV 288
VCLYLTSCV YVP+PEN+ALLRCA+ ++RKF +FP+ALR AL LNDM+L+EDIF SCKD+
Sbjct: 625 VCLYLTSCVAYVPDPENTALLRCAVDLYRKFKQFPQALRFALQLNDMKLIEDIFVSCKDL 446
Query: 289 VVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
V+QKQ+A+MLGR +F+EL++D+EE ++LTEIMSN LN FL+LARELDIMEPKVP+DI
Sbjct: 445 VMQKQLAYMLGRQQIFMELNDDIEESDELTEIMSNAPLNGAFLSLARELDIMEPKVPEDI 266
Query: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAF 385
YK+HLE NR + +DSAR NLASSFVNGFVNAAF
Sbjct: 265 YKSHLEPNRTALGANNLDSARQNLASSFVNGFVNAAF 155
Score = 84.3 bits (207), Expect(2) = e-150, Method: Composition-based stats.
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = -3
Query: 385 FGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQI 429
FGQDKLL +DGNKWLYKNK+HGMLSA ASLG+ILLW VD GL QI
Sbjct: 156 FGQDKLLMEDGNKWLYKNKEHGMLSATASLGLILLWXVDXGLIQI 22
>05545
Length = 1952
Score = 288 bits (737), Expect(2) = e-100, Method: Compositional matrix adjust.
Identities = 140/200 (70%), Positives = 159/200 (79%)
Frame = -1
Query: 642 APADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSN 701
A D+ QG+AVLGI LIAMGEEIG+EM+ R+FGHLLRYGE +RRAVPLALALISVSN
Sbjct: 1799 AGPDLSLQQGIAVLGIGLIAMGEEIGSEMSYRSFGHLLRYGELPIRRAVPLALALISVSN 1620
Query: 702 PRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNXXXXXXXXXXXXYHAKDPNNLFM 761
P+L ILDTLSKFSHD+DPEV++N+I AMG+VG+GTNN YHAKDPNNLF+
Sbjct: 1619 PKLQILDTLSKFSHDSDPEVAHNAIMAMGIVGAGTNNARLAAMLRQLAVYHAKDPNNLFI 1440
Query: 762 VRLAQXXXXXXXXXXXXCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGL 821
VRLAQ CP+HSDR LMS VAVAGL+ L+S LDV+N+ILGKSHYVLY L
Sbjct: 1439 VRLAQGLTHLGKGTLTLCPFHSDRTLMSPVAVAGLMATLISCLDVKNLILGKSHYVLYNL 1260
Query: 822 VAAMQPRMLVTFDEELRPLP 841
VAAMQPRMLVTFDEELRPLP
Sbjct: 1259 VAAMQPRMLVTFDEELRPLP 1200
Score = 97.1 bits (240), Expect(2) = e-100, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 49/50 (98%)
Frame = -2
Query: 858 KPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKNPNYD 907
KPKTITGFQTHTTPVLLA+GERAELATEE+L +TPI+EGFVILRKNP+Y+
Sbjct: 1150 KPKTITGFQTHTTPVLLAYGERAELATEEYLTLTPIMEGFVILRKNPDYE 1001
>32303
Length = 1266
Score = 28.9 bits (63), Expect(2) = 0.029, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -2
Query: 473 NSNTMRLGSIFGLGLAYAGSNREDVL-TLLLPVMGDSKSSMEVAGVTALACGMIAVGS 529
+++ +R G GLGLA G+ R+D+ L + D + E AG LA G++ +G+
Sbjct: 1079 STDMVRHGGCLGLGLAAMGTARQDIYEQLKFNLYQDDAVTGEAAG---LAMGLVMLGT 915
Score = 26.9 bits (58), Expect(2) = 0.029, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = -3
Query: 556 RWLPLGLGLNHLGKGXXXXXXXXXXXVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHI 615
R L +G+ L G+ +P +A AY GSGN +++LLH+
Sbjct: 847 RGLAVGIALTMYGRMEEADALVESLTRDKDPILRWAGMYTLAMAYCGSGNNQAIRRLLHV 668
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|21312352|ref|NP_082427.1| superkiller viralicidic
activity 2-like 2 [Mus musculus]
(1040 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13828 528 e-150
11624 31 2.9
33603 30 5.1
>13828
Length = 2681
Score = 528 bits (1360), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/411 (62%), Positives = 319/411 (77%)
Frame = +2
Query: 630 QLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGXXXXXXXXXXXXXXXGELD 689
QL L +++ YI KP Y LPFLQPGRL++VKN+ DDFGWG +
Sbjct: 2 QLDNLARDLRHYILKPIYLLPFLQPGRLIRVKNKDDDFGWGVVVSFQKKVDQSAATEDTG 181
Query: 690 PLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDLR 749
P+YVVE LL S++S + +T KP EKGEMQVVP+L L+ +S +RLYIP DLR
Sbjct: 182 PIYVVETLLYLSRDSTRGRSTAHLKPCVKGEKGEMQVVPILTKLIQCLSAIRLYIPNDLR 361
Query: 750 PVDNRQSVLKSIQEVQRRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHN 809
++R SVLKS+QEV++RF DGVP+LDP++DMGI+++GL VI+K EAFEHR+++HPLH
Sbjct: 362 SSEHRLSVLKSLQEVEKRFEDGVPVLDPLEDMGIKEKGLHDVIKKTEAFEHRLHTHPLHK 541
Query: 810 DPNLETVYTLCERKAQIALDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIE 869
D L+ +Y E+K A +IK+ + ELKK +++LQMDELKCRKRVLRRLG+AT+SDVIE
Sbjct: 542 DXRLDXLYNSYEKKTSWANEIKALRLELKKKKSLLQMDELKCRKRVLRRLGYATASDVIE 721
Query: 870 MKGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGP 929
KGRVACEISS DEL++TE++FN +FNDLS Q ALLSCFVFQE +SE PKL E+L+GP
Sbjct: 722 TKGRVACEISSGDELVITELLFNNVFNDLSPAQCCALLSCFVFQERASETPKLIEELSGP 901
Query: 930 LRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFEG 989
LR MQE AKRIA+VS EAKLEIDE+ Y+ SF+P +MD+VY W G +F+ ICKMTD+FEG
Sbjct: 902 LRLMQETAKRIARVSKEAKLEIDEDQYVESFRPQMMDIVYEWCNGCSFSKICKMTDIFEG 1081
Query: 990 SIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040
S+IRCMRRLEE LRQM QA+KAIGNTELENKFAEGI IKRDIVFAASLYL
Sbjct: 1082 SVIRCMRRLEETLRQMVQASKAIGNTELENKFAEGIRLIKRDIVFAASLYL 1234
>11624
Length = 2257
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Frame = -3
Query: 153 QSVLVSAHTSAGKTVCAEYAIALALREKQ----RVIFTSPIKALSNQKYREMYEEFQD-- 206
+ + VSA T +GKT+ I L+++ R + P++ L+ Q Y+ D
Sbjct: 1814 RDICVSAPTGSGKTLAYTLPIIQCLKQRMVPHVRAVIVLPVRDLAEQVYQVFCHYCADTP 1635
Query: 207 --VGLMTGDVTINPTASCLV 224
VG++ G N LV
Sbjct: 1634 LKVGIVVGKTVFNVEQDTLV 1575
>33603
Length = 441
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 44 KRLDTKLQSESASGGKNKRDLDVEGTDEPIFGKKPRIEDSINEDLSLAD 92
K++ K QSE + + D D TDE G PR S N D L+D
Sbjct: 101 KQMKIKTQSEESPSKPCRTDEDNATTDENKMGVNPRKRCSTNNDECLSD 247
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|21704120|ref|NP_663604.1| plastin 3 precursor [Mus
musculus]
(630 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09711 527 e-150
32088 309 2e-84
04951 172 3e-43
19002 44 2e-04
05237 44 3e-04
19147 40 0.004
14366 38 0.012
14594 37 0.024
29446 36 0.042
17613 35 0.11
17504 33 0.34
15966 33 0.48
01019 32 0.75
07198 32 1.1
26896 31 1.7
01773 30 2.9
00115 30 3.9
07153 29 5.9
26610 29 6.3
>09711
Length = 3041
Score = 527 bits (1358), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/523 (52%), Positives = 358/523 (68%), Gaps = 5/523 (0%)
Frame = +1
Query: 108 GTSELSSEGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLC 167
GTS SSEGT H+ E+ AF WIN+ L + PDC+H++P++ + LF + DG++LC
Sbjct: 1 GTSYASSEGTTHTVKAGEQKAFAEWINRHLSDXPDCKHLLPLDADGTQLFGQMADGVLLC 180
Query: 168 KMINLSVPDTIDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLV 227
K+IN SV +TIDER INK+ L+ + ENL LA+NSA AIGC VNIG EDL AG+PHLV
Sbjct: 181 KLINHSVSNTIDERTINKQNLSLYRRHENLTLAVNSAGAIGCTTVNIGPEDLAAGRPHLV 360
Query: 228 LGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGW- 286
LGLLWQII+IGL +DI L+ + L LL DGET+E+L++LSPE++LLRW N+HL +G
Sbjct: 361 LGLLWQIIRIGLLSDINLAHHPGLVNLLLDGETIEDLIRLSPEQILLRWVNYHLNRAGCD 540
Query: 287 QKINNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADK 346
++I NF DIKDS+AY HLL QI+P P + +S + D +RAE MLQ+ADK
Sbjct: 541 RQIXNFGEDIKDSEAYTHLLKQISP-------PSAGVTLSPLSVGDVHQRAECMLQEADK 699
Query: 347 LGCRQFVTPADVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWXXXXXXXXXXXXFRNW 406
+GCR FV +DVVSGN KLNLAFVANLFN YPAL P+ + D +RNW
Sbjct: 700 IGCRSFVGASDVVSGNQKLNLAFVANLFNNYPALDTPQVEVED--VMKEESREEKTYRNW 873
Query: 407 MNSLGVNPHVNHLYADLQDALVILQLYERIKVP-VDWSKVNKPPYPKLGANMKKLENCNY 465
MNSLGV+P V+HLY+DL D L+I QLY+ I+ VDWSKV K A +++ENCNY
Sbjct: 874 MNSLGVSPFVHHLYSDLYDGLIIFQLYDYIQPGLVDWSKVKKKFNKLK-ARFERIENCNY 1050
Query: 466 AVELGKNP--AKFSLVGIGGQDLNDGNPTLTLAVVWQLMRRYTLNVLEDLGEGQKA-NDD 522
AVELG K LVGI GQD+ DGNP LTL +VWQLMR YTL +L + E K +D+
Sbjct: 1051AVELGPQVKLVKVKLVGIAGQDILDGNPVLTLGLVWQLMRAYTLAILSKITENNKPISDN 1230
Query: 523 IIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDK 582
I+ WVN S+ K I F+D+ ++ + V +I+AI+PG +N+D + D+
Sbjct: 1231EIITWVN---SKIKKDDRISGFQDRKLNDGVIVARVIEAIKPGIVNWDNIDCSARDYQDR 1401
Query: 583 HNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGR 625
NA+YA+ +AR+IGA VYALPED+VEVKPKM++TVFACLM R
Sbjct: 1402LTNARYAIGLARKIGAGVYALPEDIVEVKPKMLLTVFACLMMR 1530
>32088
Length = 1928
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 209/296 (70%), Gaps = 5/296 (1%)
Frame = +1
Query: 2 DEMA---TTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQ 58
D+MA T + +D+L EL+ F +D ++NG I EL F+ + +PGY++R I+
Sbjct: 895 DKMAKRHTVALDEDQLTELRSVFDSIDDDNNGHISXGELDSAFRAVGLNIPGYELRTIMS 1074
Query: 59 KLMVDGDRNKDGKISFNEFVYIFQEVKSS-DIAKTFRKAINRKEGICALGGTSELSSEGT 117
K D + DG+++ +EF ++ KS DI TF+KA++ ++G+ +GGTSE SSEGT
Sbjct: 1075 KY----DASGDGRLNMDEFRTLYASEKSKRDIGHTFKKAVSTRQGVATIGGTSEASSEGT 1242
Query: 118 QHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDT 177
H+ + E+ AF WIN+ L++DPDC+H++ +N DDLFK VGDGI+LCK+IN SV +T
Sbjct: 1243 THTVKDGEQKAFAAWINRHLKDDPDCKHLMEVNEEGDDLFKKVGDGILLCKLINHSVSNT 1422
Query: 178 IDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKI 237
IDERAINK L + ENL LA+NSA +IGC VNIG EDL AG+PHLVLGLLWQII+I
Sbjct: 1423 IDERAINKSNLNVYHRHENLTLAVNSAGSIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRI 1602
Query: 238 GLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGW-QKINNF 292
GL +DI L+ + L LLR+GET+E+ M+LSPEE+LLRW N+HLE +G ++I NF
Sbjct: 1603 GLLSDINLAHHPGLVNLLREGETIEDFMRLSPEEILLRWVNYHLERAGTDRRIANF 1770
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Frame = +1
Query: 412 VNPHVNHLYADLQDALVILQLY-ERIKVPVDWSKVNKPPYPKLGANMKKLENCNYAVELG 470
VN + L+ + D +++ +L + +D +NK + EN AV
Sbjct: 1336 VNEEGDDLFKKVGDGILLCKLINHSVSNTIDERAINKSNLNV----YHRHENLTLAVN-S 1500
Query: 471 KNPAKFSLVGIGGQDLNDGNPTLTLAVVWQLMRRYTLNVLED------------LGEGQK 518
+ V IG +DL G P L L ++WQ++R + +L D L EG+
Sbjct: 1501 AGSIGCTTVNIGPEDLAAGRPHLVLGLLWQIIR---IGLLSDINLAHHPGLVNLLREGET 1671
Query: 519 AND-------DIIVNWVNRTLSEAGKSTSIQSF 544
D +I++ WVN L AG I +F
Sbjct: 1672 IEDFMRLSPEEILLRWVNYHLERAGTDRRIANF 1770
>04951
Length = 2852
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
Frame = +1
Query: 458 KKLENCNYAVELGKN--PAKFSLVGIGGQDLNDGNPTLTLAVVWQLMRRYTLNVLEDLGE 515
+K+ENC YAV+LG K LVGIGG+D++DGNP LTL +VWQLMR YTL +L L E
Sbjct: 1 EKIENCEYAVQLGPQMKVCKMKLVGIGGKDIHDGNPVLTLGLVWQLMRAYTLAILSKLTE 180
Query: 516 GQKA-NDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKS 574
+K D IV+WVN S+ K I SF+D ++ + V +I++I+PG +N++ +
Sbjct: 181 DKKPIQDSEIVDWVN---SKVKKDERIGSFQDSKLNDGVIVAKVIESIKPGIVNWENINP 351
Query: 575 GNLTEDDKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGM 627
DD+ NA+YA+ +AR+IGA VYALPED+VEVKPKM++TVFACLM R +
Sbjct: 352 NASEPDDRLANARYAIGLARKIGAGVYALPEDIVEVKPKMLLTVFACLMMRDL 510
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Frame = +1
Query: 211 VVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPE 270
+V IG +D+ G P L LGL+WQ+++ A L+ L D + ++ +
Sbjct: 67 LVGIGGKDIHDGNPVLTLGLVWQLMRAYTLA--------ILSKLTEDKKPIQ-------D 201
Query: 271 ELLLRWANFHLENSGWQKINNFS-ADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFN 329
++ W N ++ ++I +F + + D ++ I P G E +IN +
Sbjct: 202 SEIVDWVNSKVKKD--ERIGSFQDSKLNDGVIVAKVIESIKP-GIVNWE---NINPNASE 363
Query: 330 ETDDLKRAESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANLF 374
D L A + A K+G + P D+V PK+ L A L
Sbjct: 364 PDDRLANARYAIGLARKIGAGVYALPEDIVEVKPKMLLTVFACLM 498
>19002
Length = 842
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 11/230 (4%)
Frame = -2
Query: 162 DGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRA 221
DG +L K++ + V I K ++ EN++ AL H+ N+GA D+
Sbjct: 841 DGKMLMKLLEVRVRGEIASDXKGKMRIHCL---ENVDKALTFLHEQRVHLENMGAHDIVD 671
Query: 222 GKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHL 281
G L LGL+W II DI + E ++ S ++ LL W +
Sbjct: 670 GSSRLTLGLIWTIILRFQIQDIMI-------------EEVDNSETKSAKDALLLWC--QM 536
Query: 282 ENSGWQKIN--NFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAES 339
+ +G+ +N NF+ +D A+ ++++ P + D L ++ +
Sbjct: 535 KTAGYPNVNVRNFTTSWRDGLAFNAIIHKHRP---------------DLVQYDRLHKSSA 401
Query: 340 M--LQQA-----DKLGCRQFVTPADVVSGNP--KLNLAFVANLFNKYPAL 380
+ LQ A DKLG + P DV P K + +V ++ + +
Sbjct: 400 IQNLQNAFTVAEDKLGLTALLEPEDVNVEYPDEKSIITYVVTYYHYFSKM 251
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Frame = -2
Query: 460 LENCNYAVELGKNPAKFSLVGIGGQDLNDGNPTLTLAVVWQLMRRYTLN--VLEDLGEGQ 517
LEN + A+ + + L +G D+ DG+ LTL ++W ++ R+ + ++E++ +
Sbjct: 754 LENVDKALTF-LHEQRVHLENMGAHDIVDGSSRLTLGLIWTIILRFQIQDIMIEEVDNSE 578
Query: 518 -KANDDIIVNWVNRTLSEAGK-STSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSG 575
K+ D ++ W + AG + ++++F + LA +I +P + YD +
Sbjct: 577 TKSAKDALLLWCQ--MKTAGYPNVNVRNFT-TSWRDGLAFNAIIHKHRPDLVQYDRLHKS 407
Query: 576 NLTEDDKHNNAKYAVSMAR-RIGARVYALPEDL 607
+ + N + A ++A ++G PED+
Sbjct: 406 SAIQ-----NLQNAFTVAEDKLGLTALLEPEDV 323
>05237
Length = 472
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 47/86 (54%)
Frame = +3
Query: 12 DELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMVDGDRNKDGK 71
D DEL+EAF D + NGFI EL + L +V E+I++ +DG DG+
Sbjct: 18 DTDDELREAFRVFDKDGNGFISASELRHVMTNLGEKLTDEEVDEMIREADIDG----DGQ 185
Query: 72 ISFNEFVYIFQEVKSSDIAKTFRKAI 97
+++ EFV ++ ++ +KTF + I
Sbjct: 186VNYEEFV----KMMTTK*SKTFLQTI 251
>19147
Length = 474
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%)
Frame = +1
Query: 478 LVGIGGQDLNDGNPTLTLAVVWQLMRRYTLNVLEDLGEGQKANDDIIVNWVNRTLSEAGK 537
LV IG +++ DGN +TL ++W ++ R+ ++D+ + + ++ W R + K
Sbjct: 73 LVSIGAEEIVDGNVKMTLGMIWTIILRFA---IQDITVEELTAKEGLLLWCQRK-TAPYK 240
Query: 538 STSIQSFKDKTISSSLAVVDLIDAIQPGCINY 569
+ ++Q+F + LA LI +P I+Y
Sbjct: 241 NVNVQNFH-LSFKDGLAFCALIHRHRPELIDY 333
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%)
Frame = +1
Query: 208 GCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKL 267
G +V+IGAE++ G + LG++W II DI T+EE L
Sbjct: 64 GVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDI----------------TVEE---L 186
Query: 268 SPEELLLRWANFHLENSGWQKINNFSADIKDSKAYFHLLNQIAPK 312
+ +E LL W + NF KD A+ L+++ P+
Sbjct: 187 TAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPE 321
>14366
Length = 499
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = -3
Query: 15 DELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMVDGDRNKDGKISF 74
D L+EAF D NG I EL + L +V E+I++ + GD G++S+
Sbjct: 251 DNLREAFRIFDKEGNGMINAAELRHVLTHLGEKLSDEEVDEMIREADISGD----GQVSY 84
Query: 75 NEFVYIFQ 82
N+FV + +
Sbjct: 83 NDFVKVME 60
>14594
Length = 1014
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +3
Query: 4 MATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMVD 63
MA D +EL+EAF D + NG+I EL + L +V E+I++ +D
Sbjct: 627 MARKMKDTDCEEELREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADLD 806
Query: 64 GDRNKDGKISFNEFVYI 80
G DG +++ EFV +
Sbjct: 807 G----DGMVNYEEFVTM 845
>29446
Length = 1445
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Frame = +3
Query: 403 FRNWMNS--LGVNPHVNHLYADLQDALVILQLYERIKVPVDWSKVNKPPYPKLGANMKKL 460
F W N VN + L +D D L ++ L E + + VNK P +KL
Sbjct: 1014 FTRWANEHLRTVNKAIADLESDFSDGLRLVALIE-VLSGKKFKHVNKRP----NFRTQKL 1178
Query: 461 ENCNYAVELGKNPAKFSLVGIGGQDLNDGNPTLTLAVVWQLMRRYTLNVLEDLG------ 514
EN ++ ++ +V I D+ D L L ++W L+ Y++++ G
Sbjct: 1179 ENVTLTLKFLEDDEGIRIVNIDSTDIVDKKLKLILGLIWTLILHYSISMPMWEGEEPTPS 1358
Query: 515 EGQKANDDIIVNWVN 529
EG ++NW+
Sbjct: 1359 EGGPTPKQRLLNWIQ 1403
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +3
Query: 125 EKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAIN 184
+K F W N+ H+ +N DL DG+ L +I + + +N
Sbjct: 1002 QKNTFTRWANE---------HLRTVNKAIADLESDFSDGLRLVALIEVLSGKKF--KHVN 1148
Query: 185 KKKLTPFIIQENLNLALNS-ASAIGCHVVNIGAEDLRAGKPHLVLGLLWQII 235
K+ EN+ L L G +VNI + D+ K L+LGL+W +I
Sbjct: 1149 KRPNFRTQKLENVTLTLKFLEDDEGIRIVNIDSTDIVDKKLKLILGLIWTLI 1304
>17613
Length = 1108
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Frame = +2
Query: 203 SASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLE 262
++++ G +V+IGAE++ G + LG++W II DI + E L A ++G L
Sbjct: 47 TSTSKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDITV---EELTA--KEGLLLW 211
Query: 263 ELMKLSPEELLLRWANFHLENSGWQKINNFS 293
K P ++L + + GW + F+
Sbjct: 212 CQRKQHPTKMLTSRTSISVLRMGWHSVPLFT 304
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 478 LVGIGGQDLNDGNPTLTLAVVWQLMRRYTLN 508
LV IG +++ DGN +TL ++W ++ R+ +
Sbjct: 71 LVSIGAEEIVDGNVKMTLGMIWTIILRFAIQ 163
>17504
Length = 828
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 25 DLNSNGFI-CDYELHELFKEANMPLPGYKVREIIQKLMV 62
LNS FI +Y + + K +N P PG + REI Q L++
Sbjct: 321 SLNSCKFILINYSITRMKKASNTPFPGMRPREIFQGLLI 205
>15966
Length = 362
Score = 32.7 bits (73), Expect = 0.48, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +2
Query: 14 LDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMVDGDRNKDGKIS 73
+ +L E F D + +G++ EL L E+ V I++ D+N D KI
Sbjct: 131 VQKLAELFKAKDKSGDGYLDRDELKALLDESGQKFTADDVSAILKS----ADKNNDNKIC 298
Query: 74 FNEFV 78
F EFV
Sbjct: 299 FEEFV 313
>01019
Length = 1705
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 25 DLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMVDGDRNKDGKISFNEFVYI 80
D + NGFI EL + L +V E+I++ +DG DG++++ EFV +
Sbjct: 49 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG----DGQVNYEEFVTM 204
>07198
Length = 1675
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -3
Query: 14 LDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMVDGDRNKDGKIS 73
+DE ++ F D N +G + E F +P + +++ M D+NKDG IS
Sbjct: 485 VDEDRKVFDAADANKDGSLNSKEYFAFF------MPNSFPQLELERFMRQSDKNKDGTIS 324
Query: 74 FNEFV 78
EF+
Sbjct: 323 MEEFM 309
>26896
Length = 1498
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +2
Query: 272 LLLRWANFHLENSGWQKI---NNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINM 325
L+ +WA+ HL GW KI N FS K YF + G++E + M
Sbjct: 404 LIPKWASNHLRYVGW*KIRRKNTFSLSFTSFKVYFEICG*TQLIGRQENSQVFPVXM 574
>01773
Length = 1950
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 16 ELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMVDGDRNKDGKISFN 75
+L E F D + +G++ EL L E+ V I++ D+N D KI F
Sbjct: 370 KLAELFKAKDKSGDGYLDRDELKALLDESGQKFTADDVSAILKS----ADKNNDNKICFE 537
Query: 76 EFV 78
EFV
Sbjct: 538 EFV 546
>00115
Length = 2896
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = -2
Query: 117 TQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNP 151
+ H + E +++FVN +NK ++N+ +C P++P
Sbjct: 2253 STHEHINEHRFSFVNCVNKCIDNNENC----PISP 2161
>07153
Length = 1469
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 422 DLQDALVILQLYERIKVPVDWSKVNKPPYPKLGANMKKLENCN 464
D +++ R D SKVNK PYP N+ + CN
Sbjct: 495 DAASDVILFLCTSRYF*TCDGSKVNKLPYPSFYINIDRFSFCN 367
>26610
Length = 455
Score = 28.9 bits (63), Expect = 6.3, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 16 ELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMVDGDRNKDGKISFN 75
+L EAF +D +GF+ EL L + + ++++L VD +G++
Sbjct: 261 QLDEAFNTIDKEGSGFVMATELRHLLTHMGDRITDEEFNALLEELEVD----SNGRVRRK 428
Query: 76 EFVYIF 81
EFV +
Sbjct: 429 EFVQLL 446
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|54020676|ref|NP_001005509.1| eukaryotic translation
initiation factor 2A [Mus musculus]
(581 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06563 528 e-150
11361 35 0.10
01070 32 0.58
34005 29 4.4
11117 29 5.4
>06563
Length = 2303
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/576 (46%), Positives = 348/576 (60%), Gaps = 3/576 (0%)
Frame = -2
Query: 8 LTVRGSEGLYMVNGPPHFTESTVLPRESGRNCKVYTFSKDGTLFAWSNGEKVNIINVANK 67
L +RGSEG+++VNG P + + G+ CK +S DG L AW+ + V ++ V+
Sbjct: 2296 LALRGSEGIWIVNGAPGHDPTPKHRCDQGKTCKAMAYSADGRLLAWATADCVYVMXVSTY 2117
Query: 68 GLLHSFDLPKAVCLEFSPNNTVLATWQPYTTSKDGTAGTPNLQLYDMKTGACLKSFIQKK 127
+ + L FSP +VLATW P+ +DG G PN+ ++D +G LK+F+QKK
Sbjct: 2116 TVKQQLQQTRVAELMFSPRGSVLATWGPFYMDRDGKGGEPNMVIWDXASGNVLKTFVQKK 1937
Query: 128 MQNWCPSWSDDEIICARXXXXXXXXXXXXXXXTIANKLHLQKVNDFNLSPGTQPYKVAVY 187
W +WS DE IC R T+A +LHLQKV DF+L+P + PY ++ Y
Sbjct: 1936 QIGWELAWSVDEAICCRTANSEVHFYENNNFDTVAQRLHLQKVVDFSLAPASAPYVISAY 1757
Query: 188 VPGSKGAPSFVRLYQYPNFAGPQAALANKSFFKADKVTMLWNKKATAVLVIASTEVDKTG 247
V G KG PSFVR+Y+YP+F G AA+ANKSF+KAD+V WNK T ++++ STE +
Sbjct: 1756 VAGVKGQPSFVRVYRYPHFDGQSAAIANKSFYKADRVNTFWNKTGTGLVILTSTE--SSD 1583
Query: 248 ASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATVFNLKCD 307
+SYYGEQ LHYI+T+GES +V L K GP+Y V+W+ + EFC VYGFMPAK T+FNLKC+
Sbjct: 1582 SSYYGEQGLHYISTSGESCLVPLEKKGPVYSVMWSPKNNEFCVVYGFMPAKVTLFNLKCE 1403
Query: 308 PVFDFGTGPRNAAFYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCP 367
PVFDFGTGPRN FY+P G+IL LAGFGNL G ME WD+K K ISK A+D+T FAW P
Sbjct: 1402 PVFDFGTGPRNHCFYNPQGNILCLAGFGNLAGHMEFWDLKQKKEISKFKAADTTNFAWSP 1223
Query: 368 DGEHILTATCAPRLRVNNGYKIWHYTGSLLHKYDVPSNGELWQVSWQPFLDGIFPAKTIK 427
DGEH LTAT +PRLRV+NGY++WHYTGSLL P L+ WQP +G F K ++
Sbjct: 1222 DGEHFLTATVSPRLRVSNGYRLWHYTGSLLSSVSTPEGESLFDAIWQPAPEGTFKEKAVR 1043
Query: 428 YQAVPSEVPSEEPKVATAYRPPALRNKPVTNS-KLHEEEPPQNMK-PHPGSDKPLSKTAL 485
Y+ + + E K AYRPP R T S KLHE EP N+K +DKP SK
Sbjct: 1042 YKPAEPGLDTVENKKTXAYRPPQARGANYTPSVKLHEYEPASNVKQAQAAADKPASKNKK 863
Query: 486 KNXXXXXXXXX-XXXXXXSDAAPTPVPQSAPRNTVTQSASGDPEVDXXXXXXXXXXXAIE 544
K S A + ++GDPE D IE
Sbjct: 862 KRDARKAKATEGEESAVTSGPATPAAVTAPAPAATPAVSTGDPEKDKKIRNLRKKLQQIE 683
Query: 545 QLKEQAAAGKQLEKNQLEKIQKETALLQELEDLELG 580
+LK+Q GKQLE NQLEK++ E LLQELEDLE+G
Sbjct: 682 KLKDQQKGGKQLEMNQLEKLKSEAGLLQELEDLEIG 575
>11361
Length = 665
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -1
Query: 98 TSKDGTAGTPNLQLYDMKTGACLKSFIQKKMQNWCPSWSDDEI--ICA 143
T+K G T N+ D+KT +C ++ I NW P W +DEI IC+
Sbjct: 422 TTKRGCTCTCNVXTMDLKTRSC-QTQISSAAINWLPFWKNDEICXICS 282
>01070
Length = 1597
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 9/40 (22%)
Frame = +2
Query: 364 AWCPDGEHILTATCAPRL---------RVNNGYKIWHYTG 394
+WC +L +C PRL +VNN Y +W+Y G
Sbjct: 149 SWCRFDIVLLDVSCLPRLSLASAVQAFKVNNNYVLWYYLG 268
>34005
Length = 456
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 43 TFSKDGTLFAWSNGEKVNIINVANKGLLHSFDLPKAVCLEFSPNNTVLATWQPYTTSKDG 102
++S D T A +G N +N+ + L D+P L W P+ T
Sbjct: 133 SWSPDATFLA--SGSNDNSVNIWDSTL--GMDVPPLHTLTSHQAAVKAVAWCPWQTRMLA 300
Query: 103 TAGTPN---LQLYDMKTGACLKS 122
T G N ++ ++ TGAC+K+
Sbjct: 301 TGGGTNDRHIRFWNTNTGACVKA 369
>11117
Length = 573
Score = 28.9 bits (63), Expect = 5.4, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 382 RVNNGYKIWHYTGSLLHKYDVPSNGELWQVSWQPFLDGIFPAKTIK 427
+V+N Y IW++ G+LL K + Q+ W+P + K IK
Sbjct: 17 KVDNAYWIWNFQGNLLVKQPME---RFCQLMWRPRAPSLLTDKQIK 145
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|114052442|ref|NP_057922.2| misshapen-like kinase 1
isoform 1 [Mus musculus]
(1300 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01431 526 e-149
27197 228 1e-59
06151 183 2e-52
18921 188 2e-47
13212 180 2e-45
19094 126 7e-43
12721 167 2e-41
14420 144 2e-34
00300 133 4e-31
13592 117 3e-26
37602 89 2e-22
06405 84 3e-16
01756 84 3e-16
01718 84 4e-16
01707 84 4e-16
14126 83 7e-16
01060 81 3e-15
09606 79 9e-15
21079 79 2e-14
28638 64 2e-14
04852 77 5e-14
03240 76 9e-14
12786 74 3e-13
30755 71 2e-12
00392 71 3e-12
18484 70 6e-12
31885 70 6e-12
21808 69 1e-11
00715 68 3e-11
29581 67 4e-11
15910 67 4e-11
01392 67 5e-11
14116 66 7e-11
19301 66 8e-11
26560 65 1e-10
11780 63 9e-10
07940 62 2e-09
04591 61 3e-09
17975 61 3e-09
21433 60 4e-09
19761 60 4e-09
01966 60 4e-09
27405 60 7e-09
17253 59 1e-08
09007 59 2e-08
13066 58 2e-08
26711 57 6e-08
16708 57 6e-08
21210 57 6e-08
07291 55 2e-07
03508 54 3e-07
04138 52 2e-06
07836 51 3e-06
14477 50 7e-06
17300 49 1e-05
27546 47 5e-05
12672 45 1e-04
11404 41 0.002
25019 41 0.003
07833 41 0.004
11185 41 0.004
31489 40 0.005
18996 40 0.006
28157 40 0.007
20640 39 0.012
37063 39 0.016
24241 38 0.021
18663 37 0.043
32359 37 0.058
36481 37 0.059
02638 37 0.064
01106 35 0.16
00486 35 0.16
32691 35 0.28
28865 34 0.34
18481 34 0.36
17516 34 0.47
26156 33 0.62
15741 33 0.64
29590 33 0.76
21800 33 0.81
22005 33 0.82
32000 32 1.8
26009 32 2.4
21727 30 4.7
>01431
Length = 1309
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 238/325 (73%), Positives = 283/325 (87%), Gaps = 3/325 (0%)
Frame = +2
Query: 979 IRKYKKRFNSEILCAALWGVNLLVGTENGLMLLDRSGQGKVYGLIGRRRFQQMDVLEGLN 1038
IRKYKKRFNSEILCAALWGVNLL+GTENGLMLLDRSGQGKVY LI RRRFQQM+VLEG N
Sbjct: 2 IRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRSGQGKVYQLISRRRFQQMEVLEGQN 181
Query: 1039 LLITISGKRNKLRVYYLSWLRNKILHND---PEVEKKQGWTTVGDMEGCGHYRVVKYERI 1095
+L+TISGK+N++RVYYLSWL++KIL D +VE++ GW VGD++G H+++VKYERI
Sbjct: 182 ILVTISGKKNRVRVYYLSWLKSKILRTDGLSDQVERRNGWINVGDLQGAVHFKIVKYERI 361
Query: 1096 KFLVIALKNSVEVYAWAPKPYHKFMAFKSFADLPHRPLLVDLTVEEGQRLKVIYGSSAGF 1155
KFLVIALK+S+E+YAWAPKPYHKFMAFK+F +L HRPLLVDLT+E+ RLKVIYGS+ GF
Sbjct: 362 KFLVIALKDSIEIYAWAPKPYHKFMAFKNFGELEHRPLLVDLTIEDQSRLKVIYGSAEGF 541
Query: 1156 HAVDVDSGNSYDIYIPVHIQSQITPHAIIFLPNTDGMEMLLCYEDEGVYVNTYGRIIKDV 1215
HAVD+DS YDIY+P H Q I PH I+ LPN++GM++LLCY++EGVYVNT GR+ K++
Sbjct: 542 HAVDLDSAEVYDIYLPKHTQGAIIPHCIVALPNSNGMQLLLCYDNEGVYVNTAGRVSKNI 721
Query: 1216 VLQWGEMPTSVAYICSNQIMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVF 1275
VLQWGEMPTSVAYI + QIMGWG KAIEIRSVE+GHLDGVFMHK+AQRLKFLCERNDKVF
Sbjct: 722 VLQWGEMPTSVAYIGTGQIMGWGNKAIEIRSVESGHLDGVFMHKKAQRLKFLCERNDKVF 901
Query: 1276 FASVRSGGSSQVYFMTLNRNCIMNW 1300
F+S + S Q+YFMTLN+ + NW
Sbjct: 902 FSSAKGASSCQIYFMTLNKPGMANW 976
>27197
Length = 450
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 124/139 (89%)
Frame = +1
Query: 975 ETPEIRKYKKRFNSEILCAALWGVNLLVGTENGLMLLDRSGQGKVYGLIGRRRFQQMDVL 1034
+TPEIRKYKKRF S+ILCAALWGVNLL+GTENGLMLLDRSGQGKVY LI RRRFQQM+VL
Sbjct: 1 DTPEIRKYKKRFGSDILCAALWGVNLLIGTENGLMLLDRSGQGKVYTLISRRRFQQMEVL 180
Query: 1035 EGLNLLITISGKRNKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDMEGCGHYRVVKYER 1094
EG N+L+TISGK+NK+RVYYLSWL+ KI +D +KK G+ VG++EGC H+++VKYER
Sbjct: 181 EGQNILVTISGKKNKIRVYYLSWLKTKIFKSDGS-DKKNGFVNVGELEGCVHFKIVKYER 357
Query: 1095 IKFLVIALKNSVEVYAWAP 1113
IKFLVIAL +S+E+YAWAP
Sbjct: 358 IKFLVIALHDSIEIYAWAP 414
>06151
Length = 503
Score = 183 bits (464), Expect(2) = 2e-52, Method: Composition-based stats.
Identities = 92/189 (48%), Positives = 116/189 (61%), Gaps = 3/189 (1%)
Frame = -1
Query: 1014 SGQGKVYGLIGRRRFQQMDVLEGLNLLITISGKRNKLRVYYLSWLRNKILHND---PEVE 1070
SGQGKVY LI RRRFQQM+VLEG N+L+TISGK+N++RVYYLSWL++KIL D +VE
Sbjct: 446 SGQGKVYQLISRRRFQQMEVLEGQNILVTISGKKNRVRVYYLSWLKSKILRTDGLSDQVE 267
Query: 1071 KKQGWTTVGDMEGCGHYRVVKYERIKFLVIALKNSVEVYAWAPKPYHKFMAFKSFADLPH 1130
++ GW VGD++ F
Sbjct: 266 RRNGWINVGDLQ-----------------------------------------EFW*TGT 210
Query: 1131 RPLLVDLTVEEGQRLKVIYGSSAGFHAVDVDSGNSYDIYIPVHIQSQITPHAIIFLPNTD 1190
PLLVDLT+E+ RLKVIYGS+ GFHAVD+DS YDIY+P H Q I PH I+ LPN++
Sbjct: 209 SPLLVDLTIEDQSRLKVIYGSAEGFHAVDLDSAEVYDIYLPKHTQGAIIPHCIVALPNSN 30
Query: 1191 GMEMLLCYE 1199
GM++LLCY+
Sbjct: 29 GMQLLLCYD 3
Score = 43.1 bits (100), Expect(2) = 2e-52, Method: Composition-based stats.
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2
Query: 995 LWGVNLLVGTENGLMLLDRSGQGK 1018
+WGVNLL+GTENGLMLLDR + +
Sbjct: 502 VWGVNLLIGTENGLMLLDRLARAR 431
>18921
Length = 697
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/241 (43%), Positives = 147/241 (60%), Gaps = 3/241 (1%)
Frame = +2
Query: 16 SALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKK 75
S R P +F+++ +G G+YG V+K H +TGQ+ AIK + V IK EI+++++
Sbjct: 8 SLARPPEDVFDILGKLGEGSYGSVFKSLHKETGQVLAIKQVPVDTDLQEIIK-EISIMQQ 184
Query: 76 YSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICR 135
+ I YYG++ K + LW+VME+CGAGSV+D+++ + L E IA I
Sbjct: 185 -CDSKYIVKYYGSYFKNT------DLWIVMEYCGAGSVSDIMR-LRNKTLVEREIATILY 340
Query: 136 EILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 195
L+GL +LH+ + IHRDIK N+LL KL DFGV+ QL T+ +RNT IGTPYWM
Sbjct: 341 YTLKGLXYLHSRRKIHRDIKAGNILLNNEGHAKLADFGVAGQLTDTMAKRNTVIGTPYWM 520
Query: 196 APEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM---RALFLIPRNPPPR 252
APEVI + YD +DIWSLGITA+EMAEG PP+ + + + F P N PP
Sbjct: 521 APEVIQ-----EIGYDCVADIWSLGITALEMAEGKPPVMETSIL*GQSS*F--PTNAPPP 679
Query: 253 L 253
L
Sbjct: 680 L 682
>13212
Length = 1067
Score = 180 bits (456), Expect(2) = 2e-45, Method: Composition-based stats.
Identities = 90/167 (53%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Frame = -1
Query: 125 LKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 184
+ E I Y+C E+ L LH H VIHRDIK NVLLT + EVKL DFGVSA+ +T +
Sbjct: 989 MTEAQICYVCHEMCMALDFLHRHHVIHRDIKAGNVLLTIDGEVKLADFGVSAKNTQTQQK 810
Query: 185 RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 244
R+TFIGTPYWMAPEV+ C+ D YD+++DIWSLG+T IE A+ PP +MHPMR L
Sbjct: 809 RDTFIGTPYWMAPEVVLCETLKDTPYDFKADIWSLGVTLIEFAQIEPPNKEMHPMRVLIK 630
Query: 245 IPRNPPPRL-KSKKWSKKFTDFIDTCLIKTYLSRPPTEQLLKFPFIR 290
I ++ PP L K KKW+K F DFI CL+K RP +LL+ PF++
Sbjct: 629 IHKSDPPTLEKPKKWTKLFKDFIAKCLVKDPNLRPTAAELLEHPFMK 489
Score = 22.7 bits (47), Expect(2) = 2e-45, Method: Composition-based stats.
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 101 LWLVMEFCGA 110
LW+ +EFCG
Sbjct: 1057 LWMFLEFCGG 1028
>19094
Length = 898
Score = 126 bits (317), Expect(2) = 7e-43, Method: Composition-based stats.
Identities = 65/121 (53%), Positives = 81/121 (66%)
Frame = +1
Query: 109 GAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVK 168
GAGSV+D+++ + L E IA I L+GL +LH+ + IHRDIK N+LL K
Sbjct: 4 GAGSVSDIMR-LRNKTLVEREIATILYYTLKGL*YLHSRRKIHRDIKAGNILLNNEGHAK 180
Query: 169 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAE 228
L DFGV+ QL T+ +RNT IGTPYWMAPEVI + YD +DIWSLGITA+EMAE
Sbjct: 181 LADFGVAGQLTDTMAKRNTVIGTPYWMAPEVIQ-----EIGYDCVADIWSLGITALEMAE 345
Query: 229 G 229
G
Sbjct: 346 G 348
Score = 67.4 bits (163), Expect(2) = 7e-43, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 229 GAPPLCDMHPMRALFLIPRNPPPRLKS-KKWSKKFTDFIDTCLIKTYLSRPPTEQLLKFP 287
G PP D+HPMRA+F+IP PPP + KWS +F DF+ CL+K +R LL+
Sbjct: 345 GKPPYGDIHPMRAIFMIPTKPPPSFRQPDKWSTEFIDFVSKCLVKNPENRATAVDLLQHD 524
Query: 288 FIR 290
FI+
Sbjct: 525 FIK 533
>12721
Length = 821
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 145/255 (56%), Gaps = 2/255 (0%)
Frame = +1
Query: 20 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIK-QEINMLKKYSH 78
DP + +G G+ G V + G+ A+K MD+ + E+ +++ Y H
Sbjct: 79 DPRTFLDDFMKIGEGSTGIVCIATS-RDGRQMAVKKMDLRKQQRRELLFNEVVVMRDY-H 252
Query: 79 HRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREIL 138
H NI Y +++ +D+LW+VMEF G++TD+V N N + E IA +CR L
Sbjct: 253 HPNIVEMYNSYLV------NDELWVVMEFMEGGALTDIVTN---NRMDEVQIATVCRACL 405
Query: 139 RGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 198
+ LA LHA+ VIHRDIK ++LL+ + +VKL DFG AQ+ + + +R + +GTPYWMAPE
Sbjct: 406 KALAFLHANGVIHRDIKSDSILLSHDGKVKLXDFGFCAQVTQDLQKRKSLVGTPYWMAPE 585
Query: 199 VIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLK-SKK 257
VI+ Y DIWSLGI +EM + PP + P++A+ I PPP+L+ + K
Sbjct: 586 VIS-----RLPYGPEVDIWSLGIMVMEMIDAEPPFFNEPPLQAMRRIRDMPPPKLRNTHK 750
Query: 258 WSKKFTDFIDTCLIK 272
S + FID L++
Sbjct: 751 ISPRLQGFIDRMLVR 795
>14420
Length = 528
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 102/171 (59%)
Frame = +2
Query: 72 MLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIA 131
++ + + + NI Y +++ ++LW+VMEF GS+TD+V T + E IA
Sbjct: 56 LVMRENQNPNIVNYLDSYLV------GEELWVVMEFLAGGSLTDVVTET---CMDEGQIA 208
Query: 132 YICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGT 191
+CRE L+ L LH ++VIHRDIK N+LL + VKL DFG AQL +R+T +GT
Sbjct: 209 AVCRECLQALEFLHENQVIHRDIKSDNILLGMDGSVKLTDFGFCAQLSPEQSKRSTMVGT 388
Query: 192 PYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL 242
PYWMAPEV+ Y DIWSLG+ IEM EG PP + +P+RAL
Sbjct: 389 PYWMAPEVVT-----RKQYGPTVDIWSLGVMCIEMIEGEPPYLNENPLRAL 526
>00300
Length = 2318
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 128/266 (48%), Gaps = 6/266 (2%)
Frame = -1
Query: 31 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYS--HHRNIATYYGA 88
+G G +G+VY ++ TG+L A+K M +++ + +K + H N+ YYG
Sbjct: 1634 IGEGQFGKVYTAVNMSTGELMALKEMKFQPNDLQQLREMCDEIKIFEGIQHENLVKYYGV 1455
Query: 89 FIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHK 148
+ K D++ + ME+C G++ + K L E I REI+ + HLH +
Sbjct: 1454 EVHK------DEMLMFMEYCDTGTIEEAAKM----GLPEYLIRRYTREIVLAVNHLHENS 1305
Query: 149 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---GRRNTFIGTPYWMAPEVIACDEN 205
++HRDIKG N+ LT N VKL DFG S +L G + +GT +MAPEV +N
Sbjct: 1304 IVHRDIKGANIFLTSNGHVKLGDFGCSVKLKSHTTMPGEFHNLVGTTAYMAPEVFT--QN 1131
Query: 206 PDATYDYRSDIWSLGITAIEMAEGAPPLCDM-HPMRALFLIPRNPPPRLKSKKWSKKFTD 264
Y +DIWSLG IEMA G P D+ + + ++ + P + S +
Sbjct: 1130 DQGGYGRAADIWSLGCVVIEMATGKRPWHDLDNNYQIMYKVGIGHKPAVPD-SLSVEGKH 954
Query: 265 FIDTCLIKTYLSRPPTEQLLKFPFIR 290
F+D + R QLL F +
Sbjct: 953 FLDLIMCHDPAQRALASQLLDHTFTK 876
>13592
Length = 980
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 140/285 (49%), Gaps = 12/285 (4%)
Frame = +2
Query: 31 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIK---QEINMLKKYSHHRNIATYYG 87
+G G +G+VY + TG+L A+K + + +K +E+ +L+ H +N+ YYG
Sbjct: 8 IGQGRFGKVYTAVNNNTGELMAMKEIAIQPGETRALKNVAEELKILEGIKH-KNLVRYYG 184
Query: 88 AFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAH 147
+ + ++L + ME C G++ LV+ T G L E ++L G+A LH H
Sbjct: 185 IEVHR------EELLIFMELCSEGTLESLVELTGG--LPEALSRRFTAQLLSGVAELHKH 340
Query: 148 KVIHRDIKGQNVLLTENA-EVKLVDFG--VSAQLDRTV-GRRNTFIGTPYWMAPEVIACD 203
++HRDIK N+ L + + +KL DFG V Q TV G ++GT +MAPEV
Sbjct: 341 GIVHRDIKTANIFLVDGSNSLKLGDFGSAVKIQAHTTVPGELQGYVGTQAYMAPEVFT-K 517
Query: 204 ENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP-MRALFLIPRNPPPRLKSKKWSKKF 262
N D + +DIWS+G +EMA G P + +F + P+ + S++
Sbjct: 518 TNSDG-HGRLADIWSVGCVVVEMASGKRPWAQFDSNFQIMFKVGMGEKPQ-APESLSQEG 691
Query: 263 TDFIDTCLIKTYLSRPPTEQLLKFPFIR----DQPTERQVRIQLK 303
DFID CL R +LL+ F + ++ Q+ Q++
Sbjct: 692 HDFIDHCLQHDPKQRLSAIELLEQNFCKSGRDEECNSEQLHAQMR 826
>37602
Length = 804
Score = 89.4 bits (220), Expect(3) = 2e-22, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Frame = -1
Query: 81 NIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRG 140
NI T+ G F ++LW+ ME+CG GS+ D+ T L E IA++CRE L+G
Sbjct: 345 NIQTFVGYF---DSYLRREKLWIAMEYCGGGSMQDIYHVT--GPLTEPQIAFVCRETLKG 181
Query: 141 LAHLHAHKVIHRDIKGQNVLLTENAEVKLVDF-----GVSAQLDRTVGRRNTFIGTP 192
L +LH +HRDIKG N+LLTE +VKL DF S + + V N FIG P
Sbjct: 180 LHYLHRRGKMHRDIKGANILLTEEGDVKLADFWRVSSNHSHNVQKKVFHWNAFIGWP 10
Score = 34.3 bits (77), Expect(3) = 2e-22, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -2
Query: 19 RDPAGIFELVEVVGNGTYGQVYKGR 43
R+P FEL++ VG+GTYG VYK +
Sbjct: 521 RNPLDDFELIQRVGSGTYGDVYKAK 447
Score = 21.9 bits (45), Expect(3) = 2e-22, Method: Composition-based stats.
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 193 YWMAPEV 199
YWMAPEV
Sbjct: 22 YWMAPEV 2
Score = 46.2 bits (108), Expect(2) = 1e-05, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1
Query: 171 DFGVSAQLDRTVGRRNTFIGTPYWMA 196
DFGVSAQ+ T+ +R +FIGTPYWMA
Sbjct: 744 DFGVSAQITATMCKRKSFIGTPYWMA 667
Score = 22.7 bits (47), Expect(2) = 1e-05, Method: Composition-based stats.
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2
Query: 158 NVLLTENAEVKLV 170
N+LLTE +VKLV
Sbjct: 803 NILLTEEGDVKLV 765
Score = 32.7 bits (73), Expect = 0.90, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 172 FGVSAQLDRTVGRRNTFIGTPYWMAP 197
FGVSAQ+ T+ +R +FIGTP P
Sbjct: 86 FGVSAQITATMCKRKSFIGTPLLDGP 9
>06405
Length = 1965
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Frame = +1
Query: 31 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIATYYGAFI 90
+G G YG VY+ + ++ A+K + +E ++K+ H N+ G
Sbjct: 283 LGGGQYGDVYEAMWKRYNKIVAVKTLKEDTMALNDFLEEAAIMKEMKH-PNLVQLLGVCT 459
Query: 91 KKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVI 150
++ P ++V EF G++ D ++++ + Y+ +I G+A+L I
Sbjct: 460 REPP------FYIVTEFMPHGNLLDYLRSSTREENGPTALMYMATQIASGMAYLETKNFI 621
Query: 151 HRDIKGQNVLLTENAEVKLVDFGVSAQL-DRTVGRRNTFIGTPY---WMAPEVIACDENP 206
HRD+ +N L+ ++ VK+ DFG++ + D T IG + W APE +A +
Sbjct: 622 HRDLAARNCLVADSNMVKVADFGLARLMKDDTY---TAHIGAKFPIKWTAPEGLAFNR-- 786
Query: 207 DATYDYRSDIWSLGITAIEMA 227
+ RSDIW+ G+ E+A
Sbjct: 787 ---FSTRSDIWAFGVLLWELA 840
>01756
Length = 1858
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 17/229 (7%)
Frame = -3
Query: 20 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIK--VMD-------VTXXXXXXIKQEI 70
D +E + +G GT+G+V+K R KT Q+ A+K +MD +T I Q +
Sbjct: 1751 DEDAKYEKLAKIGQGTFGEVFKARCKKTKQVVAMKKVLMDNEKEGFPITALREIKILQLL 1572
Query: 71 NMLKKYSHHRNIATYYGAFIKKSPPGN--DDQLWLVMEFCG---AGSVTDLVKNTKGNAL 125
N H N+ K+ N +LV EFC AG ++++ +
Sbjct: 1571 N-------HENVVDLIEICSTKATSANRYKSMFYLVFEFCEHDLAGLLSNMSVVFNLPEI 1413
Query: 126 KEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR 185
KE + ++++ GL ++H +K++HRD+K N+L+T+ +KL DFG++ + +
Sbjct: 1412 KE-----VMKQLMNGLYYIHRNKILHRDMKAANILITKQGVLKLADFGLARAFSVNLRQP 1248
Query: 186 NTF---IGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAP 231
N + + T ++ PE++ D N Y D W G EM P
Sbjct: 1247 NRYTNRVVTLWYRPPELLLGDRN----YSTAIDQWGAGCIMAEMWTRNP 1113
>01718
Length = 959
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Frame = +3
Query: 27 LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIATYY 86
+ E +G G + +V+K H TGQ+ A+K+ +T ++ E+ +L + H NI +
Sbjct: 159 ICEKIGAGFFSEVFKVTHRITGQVMALKMNTMTSNRHNMLR-EVQLLNRL-QHANILRFM 332
Query: 87 GAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHA 146
G + ++ QL + E+ +G++ L++ K L + + RGL +LH+
Sbjct: 333 GVCV------HEGQLHALTEYIPSGNLEQLLEK-KDEELPWTQRIQLTLGLARGLDYLHS 491
Query: 147 HKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVIA 201
+ IHRD+ +N+L+ + DFG++ ++ + + +G+PYWMAPEV+
Sbjct: 492 TRFIHRDLTSKNILIRREDNHGYHAVIADFGLATKIPDPLDKEKLPTVGSPYWMAPEVLN 671
Query: 202 CDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP 238
Y+ R+D++S+GI E+ P D+ P
Sbjct: 672 -----GHFYNERADLFSVGIIMCEITARIPADPDIMP 767
>01707
Length = 757
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Frame = +1
Query: 25 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQ----EINMLKKYSHHR 80
+E + +G G+YG V+K R+ +T QL AIK V IK+ EI MLK+ H
Sbjct: 70 YEKIGKIGEGSYGVVFKCRNKETSQLVAIKKF-VESEDDPLIKKIAMREIRMLKQLKHP- 243
Query: 81 NIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRG 140
N+ F +K +L LV ++ + +L + +G L E + I + L
Sbjct: 244 NLVRLIEVFRRKK------RLHLVFDYVDHTLLNELDRYPRG--LPEPMVKRIIYQTLLA 399
Query: 141 LAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 200
+ H + IHRD+K +N+L+T +VKL DFG + L ++ T ++ APE++
Sbjct: 400 VNFCHQYNTIHRDVKPENILITRQGQVKLCDFGFARILTGPGDEYTDYVATRWYRAPELL 579
Query: 201 ACDENPDATYDYRSDIWSLGITAIEMAEG 229
D Y D+W++G E+ G
Sbjct: 580 V----GDTQYGPPVDVWAIGCVFAELLTG 654
>14126
Length = 1265
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Frame = +3
Query: 25 FELVEVVGNGTYGQVYKGRHVKT-GQLAAIKVMDVTXXXX---XXIKQEINMLKKYSH-- 78
+E V V+GNG YG VYK R ++ G+ A+K + + +EI+MLK+
Sbjct: 195 YEEVAVIGNGAYGTVYKARDLRNQGEFVAMKRIRLNNTEEGMPMMAIREISMLKQLEQYE 374
Query: 79 HRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREIL 138
H N+ + + +L LV E+ T L K L D I + ++L
Sbjct: 375 HPNVVRLLDVS-HNTITDREIRLNLVFEYIEHDLATYLAK-CPSPGLGPDRIKDLMLQLL 548
Query: 139 RGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 198
G+ LH+++++HRD+K QN+L++++ +KL DFG+ A++ T + T ++ +PE
Sbjct: 549 NGVDFLHSNRIVHRDLKPQNLLISKDGRLKLADFGL-ARIYSFHMALTTVVVTLWYRSPE 725
Query: 199 VIACDENPDATYDYRSDIWSLGITAIEM 226
V+ A Y DIWS G E+
Sbjct: 726 VLM-----QAEYGTSVDIWSCGCIFAEL 794
>01060
Length = 1800
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 3/220 (1%)
Frame = +1
Query: 31 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXX---XXIKQEINMLKKYSHHRNIATYYG 87
+G GTYG VYK RH TG+ A+K + + +EI ML++ H NI
Sbjct: 97 IGEGTYGVVYKCRHRATGRKLAMKKIRLRGSEDGVPSSAIREIAMLREL-RHTNIVCLED 273
Query: 88 AFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAH 147
++ D++L+LV EF + K +G L + +I+ G+ H
Sbjct: 274 VIME------DERLFLVFEFLSMDLKMYIDKFPEGVVLDRRLVKSYVFQIVTGIXFCHQR 435
Query: 148 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPD 207
+++HRD+K QN+L+ +K+ DFG++ V + T ++ APE++
Sbjct: 436 RIVHRDLKPQNLLINHTGAIKIADFGMARTFALPVRAYTHEVVTLWYRAPEILM----GA 603
Query: 208 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 247
+ Y D+WS+G +M P + LF I R
Sbjct: 604 SKYSTPVDVWSIGTIFADMLIRTPIFKGDSEIDQLFKIFR 723
>09606
Length = 1300
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 32/296 (10%)
Frame = -3
Query: 25 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSH---HRN 81
F L E +G G + +YKGR T AI ++ + E+ + +H H N
Sbjct: 1109 FVLYEELGKGEHSIIYKGRRKGTINFVAIHCIEKCK------RPEVTNTVRMTHDISHPN 948
Query: 82 IATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGL 141
+ ++ + + LWLV+E C GS+ D++ + + L E I ++ GL
Sbjct: 947 VVQFHEWY------ETSNHLWLVVELCTGGSLADIL--AQDHHLPETSIRDFGIHLVTGL 792
Query: 142 AHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVS----------------------AQLD 179
++H+ ++ D++ VLL + +K DFG+S Q
Sbjct: 791 HYIHSLGILFHDLRPSKVLLDTSGVLKFADFGLSKVEGENLEELFFKFAEAGDQWNIQSA 612
Query: 180 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLC----D 235
+ ++ G+P +MAPEV E SD+W+LG EM G PP D
Sbjct: 611 EEMMKQVPTSGSPTYMAPEVFQGAEP-----SIMSDLWALGCVFYEMFSGHPPFLGETYD 447
Query: 236 MHPMRAL---FLIPRNPPPRLKSKKWSKKFTDFIDTCLIKTYLSRPPTEQLLKFPF 288
+ + L F +P+ RL +K S +F + +++ L K R L+K F
Sbjct: 446 ITKDKVLNKEFPLPKVKGSRLSAKP-SPEFLNLLESLLQKDSTRRLSWASLVKHAF 282
>21079
Length = 878
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Frame = +1
Query: 103 LVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVL-L 161
LVMEF GAG + + V + DC+ ++ R+I G+ ++H ++H D+K +NVL +
Sbjct: 55 LVMEFVGAGELFERVIRDDFVLTERDCVHFV-RQICSGVGYMHTQSILHLDLKPENVLCV 231
Query: 162 TENA-EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG 220
++N+ ++K++DFG+ A+ + GTP ++APEV+ DE ++ +D+WS+G
Sbjct: 232 SDNSNQIKIIDFGL-ARFYKPGDSLQVLFGTPEFIAPEVVNYDE-----INFTTDMWSIG 393
Query: 221 ITAIEMAEGAPP 232
+ + G P
Sbjct: 394 VICYILLSGLSP 429
>28638
Length = 1458
Score = 63.5 bits (153), Expect(2) = 2e-14, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = -1
Query: 149 VIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENP 206
+IH D+K +N+LL + + +K+VDFG S QL + R +I + ++ +PEV+
Sbjct: 768 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ---RIYQYIQSRFYRSPEVLL----- 613
Query: 207 DATYDYRSDIWSLGITAIEMAEGAPPLCDM 236
YD D+WSLG +EM G PPLC +
Sbjct: 612 GVPYDLAIDMWSLGCILVEMHTGEPPLCRL 523
Score = 34.7 bits (78), Expect(2) = 2e-14, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%)
Frame = -3
Query: 25 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIAT 84
+E+ ++G G++GQV K + AIK++ + E+ +L+ + H
Sbjct: 1141 YEIDSLIGKGSFGQVVKAYDHGDQEQVAIKIIKNKKPFLNQAQIEVKLLELMNRHDADNX 962
Query: 85 YYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHL 144
YY +K+ + L LV E + ++ DL++NT + IC ++ G A L
Sbjct: 961 YYIVRLKRHFMFR-NHLCLVFELL-SYNLYDLLRNTNFRGGLPQLDS*ICSAVVYGAAVL 788
>04852
Length = 1462
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 115/276 (41%), Gaps = 33/276 (11%)
Frame = +1
Query: 42 GRHVKTGQLAAIKVMD-VTXXXXXXIKQEINMLK---KYSHHRNIATYYGAFIKKSPPGN 97
GR K +A + D VT QE+ ++K K H NI + G + P
Sbjct: 4 GRVPKASTVAVKMLRDIVTAVEEQDFVQELQVMKAVKKMGSHINIVNFLGCCTQGGP--- 174
Query: 98 DDQLWLVMEFCGAGSVTDLVKNTK-----------------------GNALKEDCIAYIC 134
LW+++EF G++ D +++ + G+ ++ +
Sbjct: 175 ---LWVIVEFAKNGNLRDFLESCRDGINGYGKFVSPQDPGWYTKTPGGHVIRRKNLLSYA 345
Query: 135 REILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYW 194
+I RG+ L + K IHRD+ +NVL+TE +K+ DFG+S D R + W
Sbjct: 346 FQIARGMEFLASRKCIHRDLAARNVLVTEEHVLKIADFGLSRTGDYYKKRSGGRLPVK-W 522
Query: 195 MAPEVIACDENPDATYDYRSDIWSLGITAIEM-AEGAPPLCDMHPMRALF--LIP---RN 248
MAPE + D Y +SD+WS G+ E+ + G P + P L+ L+ R
Sbjct: 523 MAPEALF-----DMRYTTKSDVWSFGVVLWEIFSLGGMPYASI-PNEELYSKLLDDAYRM 684
Query: 249 PPPRLKSKKWSKKFTDFIDTCLIKTYLSRPPTEQLL 284
P P L S ++ C + RP QL+
Sbjct: 685 PRPELA----SGNLYAIMERCWLNRPSDRPEFSQLV 780
>03240
Length = 1683
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 48/258 (18%)
Frame = -3
Query: 24 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVM---DVTXXXXXX-IKQEINMLKKYSHH 79
+FE ++ +G G +G+V R TG L A+K + DV +K E ++L + +
Sbjct: 1288 MFEKIKTLGVGAFGEVSLCRKNDTGMLYAMKTLRKSDVLKRNQVAHVKAERDILAEADNE 1109
Query: 80 RNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILR 139
+ YY + + L+ VM++ G + L+ + L E + E+++
Sbjct: 1108 WVVKLYYSF-------QDHNYLYFVMDYVPGGDLMGLL--IRMEILDEPLARFYVAELVQ 956
Query: 140 GLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFG-------------------------- 173
+ +H IHRDIK N+L+ N +KL DFG
Sbjct: 955 AIESVHRMGFIHRDIKPDNILIDRNGHIKLTDFGLCTGFRWTHNSKYYQRDGTHARQDSM 776
Query: 174 -VSAQLD--------RTVGRR---------NTFIGTPYWMAPEVIACDENPDATYDYRSD 215
V QLD + + RR ++ +GTP ++APEV++ Y D
Sbjct: 775 EVKCQLDEQCQCEILKPLERRRKREQRCLAHSLVGTPNYIAPEVLS----RLGGYTSVCD 608
Query: 216 IWSLGITAIEMAEGAPPL 233
WS+G+ EM G PP
Sbjct: 607 WWSVGVILFEMLVGHPPF 554
>12786
Length = 460
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 17/121 (14%)
Frame = -3
Query: 130 IAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNT 187
I + RE+LR + LH VIH D+K N +L +KL+DFG++ L D+T +++
Sbjct: 404 IKFYWREMLRAVKALHNEGVIHSDLKPANFMLVA-GNLKLIDFGIANTLQQDKTSVLKDS 228
Query: 188 FIGTPYWMAPEVI--ACDENPDATYD-------------YRSDIWSLGITAIEMAEGAPP 232
+GTP +M+PE I ACD++ D + + RSD+WSLG M G P
Sbjct: 227 RVGTPSYMSPEAIMAACDDSADDSMEEDGHRTKPKYKVGVRSDVWSLGCILYNMVYGRTP 48
Query: 233 L 233
Sbjct: 47 F 45
>30755
Length = 1137
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Frame = +2
Query: 136 EILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN-TFIGTPYW 194
EI+ L +LH+ +I+RD+K +N+LL ++ +K+ DFG+ + D T GR TF GTP +
Sbjct: 56 EIISALGYLHSQGIIYRDLKLENLLLDKDGHIKVADFGLCKE-DITYGRTTKTFCGTPEY 232
Query: 195 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLC--DMHPMRALFLI-----PR 247
+APEV+ D Y D W G+ EM G P D + L L+ PR
Sbjct: 233 LAPEVLD-----DNDYGRAVDWWGTGVVMYEMICGRLPFYNRDHDVLFTLILVEDVKFPR 397
Query: 248 NPPPRLKS 255
N KS
Sbjct: 398 NITDEAKS 421
>00392
Length = 668
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Frame = +3
Query: 66 IKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNAL 125
K+E MLK+ H NI ++ + ++ N + LV E +G++ +K K +
Sbjct: 72 FKEEAEMLKEL-QHPNIVRFFD-YWEEHNHRNRKVIILVTELMTSGTLKTYLKRFKKPNV 245
Query: 126 KEDCIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLT-ENAEVKLVDFGVSAQLDRTV 182
K + CR++L+GL LH VIHRD+K N+ +T VK+ D G++ +++
Sbjct: 246 K--ILKNWCRQVLKGLYFLHTRTPPVIHRDLKCDNIFITGPTGSVKIGDLGLATLKNQSF 419
Query: 183 GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPP 232
+ + IGTP +MAPE+ + YD D+++ G+ +EMA P
Sbjct: 420 AK--SVIGTPEFMAPEMY------EEHYDEAVDVYAFGMCMLEMASSEYP 545
>18484
Length = 635
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%)
Frame = +1
Query: 125 LKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 184
KE A+ EI GL LH +I+RD+K NV+L +K+ DFG+ +
Sbjct: 34 FKEPVAAFYAAEIAVGLFFLHDQGIIYRDLKLDNVMLDSEGHIKIADFGMCKEGMTGDAT 213
Query: 185 RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 233
TF GTP ++APE++ Y D W+ G+ EM G PP
Sbjct: 214 TRTFCGTPDYIAPEIVLYQ-----PYSKSVDWWAYGVLLFEMLAGQPPF 345
>31885
Length = 529
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Frame = -2
Query: 70 INMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGN-ALKED 128
++ML + H + +Y AF +++ L++V++ G DL + + + +ED
Sbjct: 519 VDMLTRLDHPFLVNLWY-AF------QDEEDLFMVVDLFLGG---DLRYHMQQEVSFRED 370
Query: 129 CIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF 188
C+ + ++ L +L + K++HRDIK N+LL E + DF ++ QL+ +T
Sbjct: 369 CVKFYLCQLALVLDYLRSQKIVHRDIKPDNILLDEQGHCHVTDFNIATQLEDDELATSTS 190
Query: 189 IGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 233
PY MAPEV N Y + D WSLG++ E+ + P
Sbjct: 189 GTRPY-MAPEVYGVAINERRGYGFPVDWWSLGVSLFELLKKRRPF 58
>21808
Length = 1011
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Frame = +1
Query: 51 AAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGA 110
AIK + E ++KK H + I Y + DD ++++ E
Sbjct: 28 VAIKTLKSGTMDPKDFLAEAQIMKKLRHPKLIQLY-------AVCTQDDPIFIITELMKN 186
Query: 111 GSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLV 170
GS+ + ++ KG LK + I +I G+A+L + IHRD+ +N+L+++N VK+
Sbjct: 187 GSLLEFLQG-KGRVLKLPALIDIGAQIACGMAYLESQNYIHRDLAARNILVSDNNTVKIA 363
Query: 171 DFGVSA-----QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIE 225
DFG++ + + VG R W APE A + N + +SD+WS GI E
Sbjct: 364 DFGLARVIKEDEYEARVGARFPI----KWTAPE--AANYN---RFTIKSDVWSFGILLTE 516
>00715
Length = 1788
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 28/230 (12%)
Frame = +1
Query: 79 HRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREIL 138
H N+ + GA S +D WL ME+ G ++ ++ + + + + + ++
Sbjct: 103 HVNVVSILGA---TSLHRFEDGAWLAMEYVGPLNLQTILNDHQQD-IDSSMRLSLALQMA 270
Query: 139 RGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT---VGRR---------- 185
RGL +LH+ ++H D+K N LLT + ++++ DFG QL T +G R
Sbjct: 271 RGLHYLHSINIVHLDLKPANCLLTRDLKLRIADFGCCHQLTPTGLDMGEREGGMAGNELE 450
Query: 186 ---------NTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMA------EGA 230
N GT + APE++ P RSD++SLGIT +M EG
Sbjct: 451 LTPVQGAWKNELAGTLAYRAPELLK-GLQPSV----RSDVYSLGITLWQMCTRQGPYEGV 615
Query: 231 PPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFTDFIDTCLIKTYLSRPPT 280
P ++ + + L P PPP + + F D C + RP +
Sbjct: 616 PAHAVVYQVVSKDLRP-CPPPSTEDDPFEVMFRDLYTQCWARRVEDRPTS 762
>29581
Length = 1278
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%)
Frame = -2
Query: 79 HRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREIL 138
H+NI + KS D L+LVME+C + L+ N E + I ++L
Sbjct: 1178 HQNIVQLQEVVVGKSL----DSLFLVMEYC-EQDLASLLDNMPA-PFSESQVKCIVLQLL 1017
Query: 139 RGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 198
+GL +LH +IHRD+K N+L+T+ VK+ DFG++ + + T ++ APE
Sbjct: 1016 KGLRYLHEAFIIHRDLKVSNLLMTDKGCVKIADFGLARNYGKPQKPMTPKVVTLWYRAPE 837
Query: 199 VIACDENPDATYDYRSDIWSLGITAIEMAEGAP 231
++ + T+ D+WS G E+ P
Sbjct: 836 LLFGSK----THSTAIDMWSAGCILGELLGHKP 750
>15910
Length = 1361
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Frame = +2
Query: 120 TKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVL---LTENAEVKLVDFGVSA 176
T+G ++D I +IL G+ ++HA+ V+HRD+K +N+L +T+++++KL DFG+S
Sbjct: 443 TRGQYTEKDAARAI-SDILHGVQYIHANGVVHRDLKPENLLYECMTDDSKLKLADFGLSR 619
Query: 177 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 233
++ V + +T GTP + APEV+ D+ Y D+WS+G+ A + G P
Sbjct: 620 IIEPEV-QMSTVCGTPGYCAPEVLKGDK-----YTPSVDMWSVGVIAYILLCGYEPF 772
>01392
Length = 1806
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Frame = -1
Query: 131 AYICREILRGLAHLHAHKVIHRDIKGQNVL---LTENAEVKLVDF----GVSAQLDRT-V 182
+ + R I R L LH+ + HRD+K +N+L L + VK+ DF G+S D T
Sbjct: 1782 SLVVRHIARALDFLHSKGIAHRDLKPENILCEHLDDVVPVKICDFDLASGISCDGDGTKT 1603
Query: 183 GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL-------CD 235
T +G+ +MAPEV+ +YD R D+WSLGI M G PP C
Sbjct: 1602 PELLTPVGSAEYMAPEVVDAWVGDSFSYDKRCDLWSLGIILYIMLCGYPPFYGQCGEDCG 1423
Query: 236 MHPMRA-------LFLIPRNPPPRLKSKKW---SKKFTDFIDTCLIKTYLSRPPTEQLLK 285
+ A LF ++ + S++W S D I L++ R +LK
Sbjct: 1422 WNRGEACHDCQDMLFNSIQDGHYKFPSQEWTSISSSAKDLIRHLLVREPRKRYSAADVLK 1243
Query: 286 FPFIRDQPTERQV 298
P+I P Q+
Sbjct: 1242 HPWICTPPAATQL 1204
>14116
Length = 1017
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Frame = -1
Query: 29 EVVGNGTYGQVYKGRHV----KTGQLAAIKVMDVTXXXXXXIK---QEINMLKKYSHHRN 81
E +G G +G V +G K L A+K + ++ QE ++K + HH N
Sbjct: 618 EEIGKGNFGCVKRGFLTLPEQKGDILVAVKTLHNNNPREIELQSFLQEALIMKDF-HHSN 442
Query: 82 IATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGL 141
+ T G + DD +V+ F G + +++ + +D I Y +I RG+
Sbjct: 441 VLTLIGICLNL-----DDMPLVVLPFMKHGDLLTYIRDDQHQPTIKDLIMY-GVDIARGM 280
Query: 142 AHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPY-WMAPE 198
+L K +HRD+ +N +L E+ VK+ DFG++ + N P WMA E
Sbjct: 279 DYLAGLKFVHRDLAARNCMLDEDFHVKVADFGLARDIYEKEYYSSENKKAKLPVKWMALE 100
Query: 199 VIACDENPDATYDYRSDIWSLGITAIEM 226
+ YD ++D+WS G+ E+
Sbjct: 99 SL-----EKGNYDSKTDVWSYGVVLWEL 31
>19301
Length = 712
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 82/148 (55%)
Frame = +2
Query: 28 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIATYYG 87
+E +G+G G V+ G+ + ++A KV D+ + +I L+K +H NI ++ G
Sbjct: 320 LEWLGSGAQGAVFLGK-LCAEEVAVKKVRDIK-------ETDIRNLRKL-NHPNIISFKG 472
Query: 88 AFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAH 147
++P ++ME+C G + +++++ G + + ++I G+ +LH+H
Sbjct: 473 V-CTQAPC-----YCIIMEYCPYGQLYEVLRD--GKEIPPALVLDWSKQIASGMNYLHSH 628
Query: 148 KVIHRDIKGQNVLLTENAEVKLVDFGVS 175
K+IHRD+K NVL+ +N VK+ DFG S
Sbjct: 629 KIIHRDLKSPNVLVAKNDVVKISDFGTS 712
>26560
Length = 398
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Frame = -1
Query: 120 TKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 179
++ E + + E++ GL H+H+ V++RD+K N+LL EN V++ D G++
Sbjct: 380 SQHGVFTEKEVRFYAAEVMLGLEHMHSRFVVYRDLKPANILLDENGHVRISDLGLACDFS 201
Query: 180 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 233
+ R + +GT +MAPEV+ +YD +D +S G ++ +G P
Sbjct: 200 KK--RPHASVGTHGYMAPEVLM----KGQSYDSSADWFSFGCMLYKLLKGHSPF 57
>11780
Length = 1713
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Frame = +3
Query: 25 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIAT 84
E+ E +G G +G VYKG + GQ AIK + QE +++ H N+
Sbjct: 603 LEIGEAIGKGDFGDVYKGMY--RGQPVAIKQLKDKDRGEQSFLQEASVMTSLRHD-NLVR 773
Query: 85 YYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNAL--KEDCIAYICREILRGLA 142
G + ++ ++LV EF G G++ + ++ ++G ++ K+D I + + +
Sbjct: 774 LIGVVLGET-------IFLVTEFMGKGNLVEYLR-SRGRSVITKKDQINF-ATDTCAAME 926
Query: 143 HLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPY-WMAPEVI 200
+L + +++HRD+ +NVL+ ++ + K+ DFG++ D + T + P W APE +
Sbjct: 927 YLESKRLVHRDLAARNVLVHDDGKAKVSDFGLAKFGDFS----QTSVKFPIKWTAPEAL 1091
>07940
Length = 1336
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Frame = -3
Query: 127 EDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 186
+D I+Y ++ RG+ +L + + IHRD+ +NVL+ E +K+ DFG++ L + R
Sbjct: 347 KDLISY-AYQVARGMEYLASKQCIHRDLAARNVLVAEEYVLKIADFGLTRNLQQFDYYRK 171
Query: 187 TFIGT--PYWMAPEVIACDENPDATYDYRSDIWSLGITAIEM 226
T G WMAPE + D Y +SD+WS G+ E+
Sbjct: 170 TTDGRLPVKWMAPEALF-----DRKYTSKSDVWSYGVLLWEI 60
>04591
Length = 1117
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Frame = -2
Query: 68 QEINMLKKYSHHRNIATYYGAFIKKSPPGN--DDQLWLVMEFCG---AGSVTDL-VKNTK 121
+EI +L++ H N+ ++ P N +L+ E+C AG + +L VK +
Sbjct: 1074 REIKILQQLEHE-NVVQLQEICHTQAGPYNRYKSTFYLIFEYCDYDLAGLLNNLRVKFSL 898
Query: 122 GNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 181
+ K++ ++ ++L GL ++H +++HRDIK N+LLT + +KL DFG+S ++
Sbjct: 897 AD--KKNLMS----QLLNGLFYIHTKQILHRDIKAANILLTRDGVLKLADFGLSRPWVKS 736
Query: 182 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAP 231
R + T ++ PE++ + Y D+W +G EM P
Sbjct: 735 -KRLTNRVVTLWYRPPELLLGERE----YGPEIDMWGVGCIMAEMWSRKP 601
>17975
Length = 449
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Frame = +3
Query: 36 YGQVYKGRHVKTGQLAAIKVMDVTX---XXXXXIKQEINMLKKYSHHRNIATYYGAFIKK 92
+ V RHV TG+ A+KV+D T + QE+ +K H N+ Y +
Sbjct: 6 FAVVKLARHVFTGEKVAVKVIDKTKLDEVSRSHLFQEVRCMK-LVQHPNVVRLYEVIDTQ 182
Query: 93 SPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVIHR 152
+ +L+L++E G + D + G L+E R+I+ +++ H V+HR
Sbjct: 183 T------KLYLILELGDGGDMYDYIMRHSG-GLEEKLAKRYFRQIVEAISYCHKLHVVHR 341
Query: 153 DIKGQNVLLTEN-AEVKLVDFGVSAQL 178
D+K +NV+ E VKL DFG S L
Sbjct: 342 DLKPENVVFFEKPGLVKLTDFGFSTCL 422
>21433
Length = 590
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%)
Frame = +2
Query: 129 CIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF 188
C Y ++ L + H KVIHRDIK +N+LL ++K+ DFG S + RR T
Sbjct: 179 CYIY---QLSSALEYCHYRKVIHRDIKPENLLLGLKGDLKIADFGWSVHAPSS--RRTTM 343
Query: 189 IGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 233
GT ++ PE++ T+D D+WSLG+ E G PPL
Sbjct: 344 CGTLDYLPPEMVE-----GKTHDENVDLWSLGVLCYEFLVGTPPL 463
>19761
Length = 473
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Frame = -3
Query: 124 ALKEDCIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 181
L E I + L ++H H ++HRD+K QN+ +TE +V+L D G++ +L
Sbjct: 435 GLPERLIVCWLMQTASALNYMHTHTPVILHRDLKPQNIYVTEKGDVRLGDLGLARKLTGP 256
Query: 182 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMA--EGAPPLCDMHPM 239
+ +GT +++PE+++ + P Y+ +SDIWSLG ++ +G+ + M +
Sbjct: 255 ADFATSQVGTIMYLSPEILS--QQP---YNSKSDIWSLGCVFYDITGKKGSDEMGVMFLL 91
Query: 240 RALFLIPRNPPPRLKSKKWSKKFTDFIDTCLIK 272
+ + P P +S++F D I L K
Sbjct: 90 VQVMGGRKLPLP----DHYSQEFRDTISRMLTK 4
>01966
Length = 1735
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%)
Frame = -1
Query: 68 QEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKE 127
+EI ML++ H NI ++ D++L+LV EF + K +G L
Sbjct: 1567 REIAMLREL-RHTNIVCLEDVIME------DERLFLVFEFLSMDLKMYIDKFPEGVVLDR 1409
Query: 128 DCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT 187
+ +I+ G+ H +++HRD+K QN+L+ +K+ DFG++ V
Sbjct: 1408 RLVKSYVFQIVTGINFCHQRRIVHRDLKPQNLLINHTGAIKIADFGMARTFALPVRAYTH 1229
Query: 188 FIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM 239
+ T ++ APE++ P +T W+ G E + P+C P+
Sbjct: 1228 EVVTLWYRAPEILM---GPQST----PPXWTCG-----ALEPSSPICSSGPL 1109
>27405
Length = 532
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Frame = -3
Query: 36 YGQVYKGRHVKTGQLAAIKVMD-----VTXXXXXXIKQEINMLKKYSHHRN---IATYYG 87
+G+VY R TG++ A+K +D + + + I ML S I
Sbjct: 527 FGEVYGCRKADTGKMYAMKCLDKKRIKMKGGETLALNERI-MLSLVSTGEGSPFIVCMTY 351
Query: 88 AFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAH 147
AF ++P ++L +++ G + ++ E + + E++ GL H+H+
Sbjct: 350 AF--QTP----EKLCFILDLMNGGDLH--YHLSQHGVFTEKEVRFYAAEVMLGLEHMHSR 195
Query: 148 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPD 207
V++RD+K N+LL EN V++ D G++ + + + +GT +MAPEV+ + D
Sbjct: 194 FVVYRDLKPANILLDENGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLMKGQAYD 21
Query: 208 ATYDY 212
++ D+
Sbjct: 20 SSADW 6
>17253
Length = 483
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Frame = -1
Query: 44 HVKTGQLAAIKVMD--VTXXXXXXIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQL 101
H + A+K + T +E+++++K H N+ ++ G P
Sbjct: 480 HARQWDTVAVKTHNEAATDAEKSEFLRELSIMRKLPRHPNVVSFMGCCTMSDPA------ 319
Query: 102 WLVMEFCGAGSVTDLVKNTK----------GNALKEDCIAYICREILRGLAHLHAHKVIH 151
++MEFC G + ++ + N L + RG+AH+ +K++H
Sbjct: 318 LILMEFCCHGDLLSFLRKRRPDRTVFLTSTANDLTARDFFSFALHVARGMAHVANNKIVH 139
Query: 152 RDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 186
RD+ +NVL++E K+ DFG+S R VG +N
Sbjct: 138 RDVAARNVLISERNVCKVSDFGLS----RRVGDQN 46
>09007
Length = 1440
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 117/283 (41%), Gaps = 19/283 (6%)
Frame = -1
Query: 27 LVEVVGNGTYGQVYKG-RHVKTGQLAAIKVMDVTXXXXXXIKQEI---NMLKKYSHHRNI 82
L + +G G +G V + ++G+ + V ++ QE + + H NI
Sbjct: 867 LSKSLGQGHFGTVRQAIWTAESGEKVQVAVKCLSKDKIHKDGQEFLKETAIMQMLDHENI 688
Query: 83 ATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYIC---REILR 139
YG + N + LV E S+ + VK +A + + +C +++
Sbjct: 687 VRVYGVVMD-----NGADIMLVTELAPMRSLLECVKEV--SARVDFSVPRLCDFSQQVCD 529
Query: 140 GLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---------DRTVGRRNTFIG 190
G+++L + +++HRD+ +N+LL ++VK+ D GVS L +T+ +N
Sbjct: 528 GMSYLESKRLVHRDLAARNILLFSKSKVKISDVGVSGALGAGKEYYQSQQTIHLQNAVA- 352
Query: 191 TPYWMAPEVIACDENPDATYDYRSDIWSLGITAIE-MAEGAPPLCDMHPMRALFLIPRNP 249
W APE + + SD+W+ G+ E G P ++ + + +
Sbjct: 351 ---WCAPESFR-----NLCFSSASDVWAFGVLLWEFFTHGFQPWAGLNGQQIMEAVDAPQ 196
Query: 250 PPRLKSKKWS-KKFTDFIDTCLIKTYLSRPPTEQL-LKFPFIR 290
RL+ K++ + C + RP QL L P IR
Sbjct: 195 SQRLEQPDLCPKEYYAVMLKCWEQEPQRRPTFSQLFLTLPQIR 67
>13066
Length = 551
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Frame = +3
Query: 30 VVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQ----EINMLKKYSHHRNIATY 85
VV +GT+ Y GR++K A K++D +++ E+++L K H I +
Sbjct: 12 VVVHGTFNDGY-GRNIKL----ACKIIDKEKAPVDFVEKFFPRELDLLTKLDHPYIIQIH 176
Query: 86 YGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLH 145
+ +++ P ++ M F G + ++ K+ I + ++ L +LH
Sbjct: 177 --SILQRXPKN-----FIFMRFAERGDLLTYIQEVGFVKEKQAKIWF--YQMTTALNYLH 329
Query: 146 AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR---NTFIGTPYWMAPEVIAC 202
++ V HRD+K +N+LL+ + VKL DFG + G + T+ G+ + APE++
Sbjct: 330 SYDVAHRDLKCENILLSSHFNVKLADFGFACACITESGEKYMSRTYCGSAAYAAPEIVY- 506
Query: 203 DENPDATYDYR-SDIWSLG 220
A Y + +D WSLG
Sbjct: 507 ----GAPYAPKVADAWSLG 551
>26711
Length = 405
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Frame = -2
Query: 133 ICREILRGLAHLHAHKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDRTVGRRNTFI- 189
+ +++L L H+HA V+H D+K N+LL+ + V+L+DFG++ +L + TF+
Sbjct: 401 VVKQVLDILQHVHAQGVVHMDLKPSNLLLSGDKLDSVQLIDFGLARKL---YPPQETFLN 231
Query: 190 -GTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 233
GTP + +PE A D P +T SD+W +G+ A + G P
Sbjct: 230 HGTPGFTSPE--ALDVKPIST---ASDVWGVGVLAYILLSGQSPF 111
>16708
Length = 1397
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Frame = -1
Query: 27 LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIATYY 86
+++V+G G +G+VY+ R + T + AA+K T E+ L + +A +
Sbjct: 1391 ILQVLGKGVFGKVYEARLLSTHEKAALK----TSILCHHSLDEVEALGRIEGGFYLAQMF 1224
Query: 87 GAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNAL-----KEDCIAYICREILRGL 141
GA++ P ++ +++ F G + ++ + K + + I + + L
Sbjct: 1223 GAWVTCLP---FPKMNILLHFYEMGPLCNVYAHYKNKEMPIRWSNPAMVCCIAGQXVCAL 1053
Query: 142 AHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 178
H+H V+H D+K NVL+ + KL D+G+ AQL
Sbjct: 1052 EHIHELGVVHMDVKADNVLVDAHGNCKLTDYGI-AQL 945
>21210
Length = 518
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +3
Query: 194 WMAPEVIACDENPDAT---YDYRSDIWSLGITAIEMAEGAPPLCD-MHPMRALFLIPRNP 249
+MAPE I +P A+ YD RSD+WSLGIT +E+A G P + L + R
Sbjct: 18 YMAPERI----DPRASSHGYDVRSDVWSLGITLMELATGRFPYRKWVSIFDQLQQVVRGV 185
Query: 250 PPRL-KSKKWSKKFTDFIDTCLIKTYLSRPPTEQLLKFPFIR 290
P L +S F +F++ CL K RP +LL PF+R
Sbjct: 186 APCLPHDGAFSHDFVNFVNKCLTKDEKQRPKYNKLLAHPFVR 311
>07291
Length = 833
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Frame = +1
Query: 135 REILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--------DRTVGRRN 186
R+I G+A+L KV+HR++ +N ++TE+ ++L D+GV+ L D + R
Sbjct: 70 RQIADGMAYLQEVKVVHRNLAARNCIVTEDGRLQLSDYGVTGSLFPQSYYTADDSPAR-- 243
Query: 187 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIE-MAEGAPPLCDMH 237
WMAPE I + + +SD+W+ G+ E + G P D+
Sbjct: 244 ---DLVKWMAPETID-----NFHFSSKSDVWAFGVVLWELLTRGITPYPDVE 375
>03508
Length = 1463
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Frame = +1
Query: 113 VTDLVKNTKGNALKEDCIAYICR----EILRGLAHLHAHKVIHRDIKGQNVLLT-ENAEV 167
+ + V NT L + Y R E+++ L H+ ++HRD+K NV++ EN ++
Sbjct: 814 IFEHVNNTDFKQLYQTFTDYDIRFYLYELMKALDFCHSMGIMHRDVKPHNVMIDHENKKL 993
Query: 168 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMA 227
+L+D+G+ A+ N + + Y+ PE++ YDY D+WSLG M
Sbjct: 994 RLIDWGL-AEFYHPGMEYNVRVASRYFKGPELLL----DYQMYDYSLDMWSLGCMFASMI 1158
Query: 228 EGAPPL 233
PL
Sbjct: 1159FRKEPL 1176
>04138
Length = 800
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +1
Query: 133 ICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF---I 189
IC L ++H +K++HRD+K N+L+T+ +KL DFG++ + + N + +
Sbjct: 28 IC*AADERLYYIHRNKILHRDMKAANILITKQGVLKLADFGLARAFSVNLRQPNRYTNRV 207
Query: 190 GTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAP 231
T ++ PE++ D N Y D W G EM P
Sbjct: 208 VTLWYRPPELLLGDRN----YSTAIDQWGAGCIMAEMWTRNP 321
>07836
Length = 1478
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Frame = -1
Query: 79 HRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAY--ICRE 136
H NI + A IK + G+ QL+L+ ++ GS+ D + + ++ + +A+ IC
Sbjct: 1388 HENILGFIAADIKGT--GSWTQLFLITDYHENGSLHDYLLSRVLDSSEMLALAHSAIC-- 1221
Query: 137 ILRGLAHLHAH--------KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF 188
GLAHLH + HRDIK +N+L+ +N + D G++ R + N
Sbjct: 1220 ---GLAHLHIEIFGTRGKPAIAHRDIKSKNILVKKNGTCCIADLGLAV---RYISESNEV 1059
Query: 189 -------IGTPYWMAPEVIACDENPDATYDYR-SDIWSLGITAIEMA 227
GT +MAPEV+ N ++ +D+++ G+ E+A
Sbjct: 1058 DVAPNPRQGTKRYMAPEVLEMLLNVKNFDAFKQADMYAFGLVMWEIA 918
>14477
Length = 493
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Frame = -1
Query: 31 VGNGTYGQVYKG------RHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIAT 84
+G G +G V KG R + + +K D+ + +E ++KK H +I
Sbjct: 466 LGAGNFGSVMKGVCRLDDREIPVA-IKVLKNADLDPSVQSELIKEAEVMKKMDH-MHIVR 293
Query: 85 YYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHL 144
G + + LV+E G + + K L I + ++ +G+ +L
Sbjct: 292 LIGLC-------EGETMMLVLELAKLGPLNKFLPKNKHLPLWN--ILELMWQVSQGMEYL 140
Query: 145 HAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 198
A+K +HRD+ +N+LL + K+ DFG+S +T+ R N Y+MA E
Sbjct: 139 EANKFVHRDLAARNILLCDEHFAKISDFGMS----KTLSRENN-----YYMAQE 5
>17300
Length = 480
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +1
Query: 137 ILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGT--P 192
I G+ L +HRD+ +N+L+ E K+ DFG+S ++ D T G T G
Sbjct: 1 ISSGMGXLADMGYVHRDLAARNILVNEILVCKVADFGLSREIESDTTEGAYTTKGGKIPV 180
Query: 193 YWMAPEVIACDENPDATYDYRSDIWSLGITAIE-MAEGAPPLCD 235
W APE IA + A SD+WS G+ E M+ G P +
Sbjct: 181 RWTAPEAIAYRKFTSA-----SDVWSFGVVMWEVMSYGERPYWN 297
>27546
Length = 426
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%)
Frame = -1
Query: 68 QEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKE 127
+E+ +L + H I + + +++ P ++++ M + G + +K T + E
Sbjct: 333 RELEILTRLDHPNIIQIH--SILQRGP-----KIFIFMRYAEKGDMLSHIKKT--GPIDE 181
Query: 128 DCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVS 175
++ + L +LH+H + HRD+K +N+LL++ VK+ DFG +
Sbjct: 180 AQTKVWFFQMAKALQYLHSHDIAHRDLKCENILLSKRLNVKIADFGFA 37
>12672
Length = 773
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 133 ICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL----DRTVGRRNTF 188
I + G+ +L+ + +HRDIK N+LL K+ DF +TV +
Sbjct: 6 IVKGTASGIQYLNDNGHVHRDIKTANILLDSEYTAKVGDFATVVSAPSGEGKTVQNASVV 185
Query: 189 IGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 229
IGT ++APE I D + + D +S G+ +E+ G
Sbjct: 186 IGTAAYLAPEAIHFDVST------KLDSYSFGVVLLEVITG 290
>11404
Length = 563
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Frame = +1
Query: 22 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRN 81
A +E+ ++G G++GQV K + AIK++ + E+ +L+ + H
Sbjct: 136 ADRYEIDSLIGKGSFGQVVKAYDHTDNEQVAIKIIKNKKPFLNQAQIEVKLLEMMNRHDT 315
Query: 82 IATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGL 141
YY +K+ L LV E + ++ DL++NT + + +++ L
Sbjct: 316 DNKYYIVRLKRHFMFR-SHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFAQQLCTAL 489
Query: 142 AHLHA--HKVIHRDIKGQNVLLT 162
L +IH D+K +N+LL
Sbjct: 490 LFLATPEMSIIHCDLKPENILLC 558
>25019
Length = 730
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +3
Query: 156 GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSD 215
+NVLL ++ VKL DFG+ + +TF GT +MAPE++ + A D
Sbjct: 258 AENVLLDKDGHVKLTDFGLCKEAITGTRVTHTFCGTIEYMAPEILTRTGHGKAV-----D 422
Query: 216 IWSLG 220
WSLG
Sbjct: 423 WWSLG 437
>07833
Length = 1504
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Frame = -3
Query: 101 LWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHK--VIHRDIKGQN 158
L L+ +F GS+ + + G + ++ +I RG+ LH+ + + + + ++
Sbjct: 1394 LVLISQFMPFGSLYNTLHGESGIVVDQNQSLRFAMDIARGMEFLHSMEPTIPNFLLTSKH 1215
Query: 159 VLLTEN--AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDI 216
V++ E+ A + + D+ S G+ + +P WMAPE A PD +D+
Sbjct: 1214 VMIDEDLTARINMADYCFSFH---EKGK----VYSPAWMAPE--ALQRRPDDINTRAADM 1062
Query: 217 WSLGITAIEMAEGAPPLCDMHPMRA 241
WS I E+ P ++ M
Sbjct: 1061 WSFAILMWELETREVPFAELSSMEV 987
>11185
Length = 473
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 22/116 (18%)
Frame = +1
Query: 137 ILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVS--------------------- 175
++ GL ++H+ ++ D++ VLL + +K DFG+S
Sbjct: 28 LVTGLHYIHSLGILFHDLRPSKVLLDTSGVLKFADFGLSKVEGENLEELFFKFAEAGDQW 207
Query: 176 -AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 230
Q + ++ G+P +MAPEV E SD+W+LG EM G+
Sbjct: 208 NIQSAEEMMKQVPTSGSPTYMAPEVFQGAEP-----SIMSDLWALGCVFYEMFSGS 360
>31489
Length = 329
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 125 LKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVL 160
L E+ I Y +ILRGL ++H+ V+HRD+K N+L
Sbjct: 156 LTEEHIRYFLYQILRGLKYIHSANVVHRDLKPSNLL 263
>18996
Length = 491
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 150 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT------VGRRNTFIGTPYWMAPEVIACD 203
IHRD+ +N+L+ + VK+ DFG+ AQ + +R+ I W +PE I
Sbjct: 2 IHRDLAARNILVDRSC-VKISDFGL-AQFANADGYYYGISQRDIPIK---WYSPEAIE-- 160
Query: 204 ENPDATYDYRSDIWSLGITAIEM 226
+ SD+WS G+T EM
Sbjct: 161 ---TCKFSSYSDVWSYGVTLFEM 220
>28157
Length = 400
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +3
Query: 68 QEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNT--KGNAL 125
QE+ L + SH NI YGA D + LVME+ GS+ +++ + +
Sbjct: 57 QELKQLSRVSH-PNIVCLYGAC-------RDHPVCLVMEYAEGGSLYNVLHGSGPQPQYT 212
Query: 126 KEDCIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTE-NAEVKLVDFGVSAQL 178
+ ++ + L G+ +LH K +IHRD+K N+LL + ++K+ DFG + +
Sbjct: 213 AAHAMNWLLQCAL-GVEYLHGMKPKALIHRDLKPPNLLLIQCGTKLKICDFGTACDI 380
>20640
Length = 1492
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Frame = +1
Query: 150 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPY------WMAPEVIACD 203
+HRD+ +N L+ + VK+ DFG L R+V + + G+ + WM E I +
Sbjct: 10 VHRDLATRNCLVGHDLVVKISDFG----LARSVHSVDYYRGSEHDAIPIRWMPLEAILYN 177
Query: 204 ENPDATYDYRSDIWSLGITAIEMAEGA 230
+ + +SD+WS G+ E+ A
Sbjct: 178 K-----FSTQSDVWSFGVVLWEIFAFA 243
>37063
Length = 455
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = -2
Query: 154 IKGQNVL---LTENAEVKLVDF----GVSAQLDRT-VGRRNTFIGTPYWMAPEVIACDEN 205
+K +N+L L E +K+ DF G++ D T T +G+ +MAPEV+
Sbjct: 454 LKPENILCEHLDEVVPLKICDFDLASGINCDGDGTKTPELLTPVGSAEYMAPEVVDAWVG 275
Query: 206 PDATYDYRSDIWSLGI 221
+YD R D+WSLGI
Sbjct: 274 ESFSYDKRCDMWSLGI 227
>24241
Length = 413
Score = 38.1 bits (87), Expect = 0.021, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = -2
Query: 31 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXX---XXIKQEINMLKKYSHHRNIATYYG 87
+G GTYG VYK RH TG+ A+K + + +EI ML++ H + +
Sbjct: 319 IGEGTYGVVYKCRHRATGRKLAMKKIRLRGSEDGVPSSAIREIAMLRELRHTQXLVCLED 140
Query: 88 AFIKKSPPGNDDQLWLVMEF 107
++ D++L+LV EF
Sbjct: 139 VIME------DERLFLVFEF 98
>18663
Length = 600
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 186 NTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 233
+TF GTP ++APE++ ++ Y + D W+LG+ EM G P
Sbjct: 2 STFCGTPNYIAPEILRGED-----YGFSVDWWALGVLLYEMLAGRSPF 130
>32359
Length = 928
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = -1
Query: 29 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIATYYGA 88
+V+GNG++G VY+ + V T +L AIK + +E+ +++K H+NI
Sbjct: 412 KVIGNGSFGVVYQAKLVDTSELVAIKKV---LQDKRFKNRELQIMRKLE-HQNIVKLKFF 245
Query: 89 FIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYI---CREILRGLAHLH 145
F ++ L LV+E+ V + + I YI ++ R LA++H
Sbjct: 244 FYSSGEKKDEVFLNLVLEY--VPETVYRVARHYSKSKQTIPILYIKLYMYQLFRSLAYIH 71
Query: 146 AHKVIHRDIKGQNVLLTENAEV 167
+ + + LT+ E
Sbjct: 70 SQACVTATSSLKTCCLTQRLEC 5
>36481
Length = 806
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +2
Query: 32 GNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIATYYGAFIK 91
G GT+G+V + + + G A+K++ K EIN+L+K R +
Sbjct: 389 GEGTFGKVVQCKDLLKGDDIALKIIKNVDKYREAAKLEINVLEKL---REKDPHAKHMCV 559
Query: 92 KSPPGNDDQLWLVMEFCGAG-SVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVI 150
+ D + + F G SV D +K+ A + + +I ++ + LH +++
Sbjct: 560 QMLDWFDYHGHVCISFHMLGLSVFDFLKDNSYGAYPIEQVRHISYQLCYAVNFLHENQLT 739
Query: 151 HRDIKGQNVLLTEN 164
H D+K +N+L ++
Sbjct: 740 HTDLKPENILFVDS 781
>02638
Length = 1490
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +1
Query: 188 FIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 247
+GT +MAPEV+ +Y D+WS+G IEM PP L LI +
Sbjct: 16 LLGTIAFMAPEVLR-----GESYGRACDVWSVGCVMIEMCTCRPPWNSHDISNHLALIFK 180
Query: 248 -----NPPPRLKSKKWSKKFTDFIDTCLIKTYLSRPPTEQLLKFPFI 289
+PPP + S D + CL + RP + LL P
Sbjct: 181 IASSVDPPP--IPENMSPPVRDLMLRCLEQDSDFRPSAKDLLMHPLF 315
>01106
Length = 878
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Frame = +3
Query: 23 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNI 82
G + ++ +G G + V+ + + A+KV+ E+ +LK
Sbjct: 318 GRYHVIRKLGWGHFSTVWLCWDLTCKRFVALKVVKSAQHYTETALDEVKLLKCVRESDVA 497
Query: 83 ATYYGAFIK-----KSPPGNDDQLWLVMEFCGAGSVTDLVK-NTKGNALKEDCIAYICRE 136
++ K N + +V E G + +++ N +G + + I R+
Sbjct: 498 DPARAKCVQLLDDFKISGVNGTHVAMVFEVLGYNLLKLIIRSNYQGIPIHN--VKLIIRQ 671
Query: 137 ILRGLAHLHAH-KVIHRDIKGQNVLLT 162
+L GL+++HA ++IH DIK +N+L+
Sbjct: 672 VLEGLSYMHAKCRIIHTDIKPENILIC 752
>00486
Length = 797
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 186 NTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI 245
+TF GT +MAPE++ + A D WSLG +M G+PP + + + I
Sbjct: 784 HTFCGTIEYMAPEILTRTGHGKAV-----DWWSLGALMYDMLTGSPPFTAENRKKTIDKI 620
Query: 246 PR---NPPPRLKSKKWSKKFTDFIDTCLIKTYLSRPPTEQL 283
+ N PP L ++ LIK L + P E+L
Sbjct: 619 LKGKLNLPPYLTNEA----------RGLIKKLLRKNPAERL 527
>32691
Length = 295
Score = 34.7 bits (78), Expect = 0.28, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 257 KWSKKFTDFIDTCLIKTYLSRPPTEQLLKFPFIR 290
KWS +F DF+ CL+K +R LL+ FI+
Sbjct: 82 KWSTEFIDFVSKCLVKNPENRATAVDLLQHDFIK 183
>28865
Length = 342
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 29 EVVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTXXXXXXIKQEINMLKKY 76
+V+G+G +G VY G H +T + AIKV+D +K E+ +L+ Y
Sbjct: 184 DVLGSGQFGIVYGGCHRRTNREVAIKVIDKLRFPTKQEAQLKTEVAILQNY 32
>18481
Length = 437
Score = 34.3 bits (77), Expect = 0.36, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Frame = -1
Query: 39 VYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIATYYGAFIKKSPPGND 98
+Y+G + + G+ A+K+ + + E + ++ H + T Y +K
Sbjct: 437 IYQGYNTQDGKDIAVKI-EAIDVKHQLLHYEAKVYEQIGRHPGLPTMYHYGTEKHFNA-- 267
Query: 99 DQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQN 158
LVME G V + LK I + ++L L +H IHRD+K N
Sbjct: 266 ----LVMELLGPSLEELFVICKRRFTLKT--ILMVSDQLLSRLEFIHQKCFIHRDLKPDN 105
Query: 159 VLL---TENAEVKLVDFGVSAQLDRTVG 183
L+ + ++DFG+S + T G
Sbjct: 104 FLMGLGRHCHRLYIIDFGLSKRYKDTQG 21
>17516
Length = 453
Score = 33.9 bits (76), Expect = 0.47, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 187 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 229
T GTP +MAPEV+ YD ++D++SL I E+ G
Sbjct: 442 TLAGTPVYMAPEVLL----QKGQYDMKADVYSLAIILWELWYG 326
>26156
Length = 479
Score = 33.5 bits (75), Expect = 0.62, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -1
Query: 25 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTXXXXXXIKQEINMLKKYSHHRNIAT 84
F L+ V+G G+Y +V + H +T ++ A+KV+ ++I+ ++ H AT
Sbjct: 383 FLLLRVIGRGSYAKVLQVEHKRTKRIYAMKVIKKELVND---DEDIDWVQTEKHVFETAT 213
Query: 85 YYGAFIK-KSPPGNDDQLWLVMEFCGAGSV 113
Y + S ++ +L+ V+EF G +
Sbjct: 212 NYPFLVGLHSCFQSESRLFFVIEFVNGGDL 123
>15741
Length = 402
Score = 33.5 bits (75), Expect = 0.64, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -3
Query: 137 ILRGLAHLHAHKVIHRDIKGQNVL 160
+ RG+AH+ +K++HRD+ +NVL
Sbjct: 73 VARGMAHVANNKIVHRDVAARNVL 2
>29590
Length = 320
Score = 33.1 bits (74), Expect = 0.76, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 189 IGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 233
IGTP ++APEV+ D P ++D+WSLG+ + M P
Sbjct: 57 IGTPDYVAPEVL--DYEP---LSIQTDMWSLGVLSYVMLTACSPF 176
>21800
Length = 855
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 130 IAYICREILRGLAHLHAH-KVIHRDIKGQNVLLT 162
+ I R++L GL +LHA +IH DIK +N+L+
Sbjct: 638 VKLIIRQVLEGLNYLHAKCNIIHTDIKPENILIC 739
>22005
Length = 873
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Frame = +1
Query: 132 YICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGT 191
YI ++I G+A+L +HRD+ + + + DFG++ R+V + + G+
Sbjct: 454 YISQQISAGMAYLAQKDYVHRDL-ATRTVXSRTT*S*ISDFGLA----RSVHSVDYYRGS 618
Query: 192 PY------WMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM 236
WM E I + + +SD+WS G+ E+ P LC +
Sbjct: 619 EQDAIPIRWMPLEAILY-----SKFSTQSDVWSFGVVLWEI---LPLLCSL 747
>32000
Length = 644
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 164 NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI-ACDENPDATYDYRSDIWSLGIT 222
A++K+ DFG++ V + T ++ APE++ C Y DIWSLG
Sbjct: 581 TAKMKIADFGLARVFGLPVRTYTHEVITLWYRAPEILLGC-----RFYSVPVDIWSLGCI 417
Query: 223 AIEM 226
+EM
Sbjct: 416 FVEM 405
>26009
Length = 886
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +3
Query: 133 ICREILRGLAHLHAHKVIHRDIKGQNVLL 161
+ ++++ L +H+ +++HRDIK +NVL+
Sbjct: 726 VMKQLVSALDFMHSKQLVHRDIKPENVLI 812
>21727
Length = 366
Score = 30.4 bits (67), Expect = 4.7, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 78 HHRNIATYY--GAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNA 124
H+ N+ +++ A+ + N Q+W + EF ++ +++KN G A
Sbjct: 190 HNSNVCSFFMGKAYSRSKHQENKQQIWQIYEFTITNNLKNIIKNKNGKA 44
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|12025532|ref|NP_058616.1| ATPase, H+ transporting,
lysosomal V0 subunit a1 [Mus musculus]
(838 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07897 370 e-148
28221 174 1e-77
30032 102 5e-22
32691 32 0.79
09801 29 6.6
>07897
Length = 1376
Score = 370 bits (949), Expect(2) = e-148, Method: Compositional matrix adjust.
Identities = 173/281 (61%), Positives = 217/281 (77%)
Frame = +2
Query: 166 LRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQ 225
++LGFVAGVI RE++P FER+LW CRGNVFLR IE LEDP++G+ V K VF+IF+Q
Sbjct: 77 IQLGFVAGVIPREKVPAFERLLWFACRGNVFLRHEPIEYALEDPMSGNPVLKDVFVIFYQ 256
Query: 226 GDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDDLQMVLNQTEDHRQRVLQA 285
G+QLKN+VKKICEGF+AS+YPCPET +ER++M GV TR+ DL +V+NQT DHR RVL
Sbjct: 257 GEQLKNKVKKICEGFKASVYPCPETFEEREDMLKGVVTRLADLAIVMNQTADHRYRVLVG 436
Query: 286 AAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEVWCPVTDLDSIQFALRRGTEHSG 345
A K++R W IKV K+KAIYHTLN+ N D++ LIAE WCP + LD + ALR G SG
Sbjct: 437 AQKDMRSWMIKVEKIKAIYHTLNMFNFDMSHNSLIAECWCPRSALDKVYTALRSGEMASG 616
Query: 346 STVPSILNRMQTNQTPPTYNKTNKFTHGFQNIVDAYGIGTYREINPAPYTVITFPFLFAV 405
STVPSI+ M+T + PPTY +TNKFT GFQNIV+AYGI TYRE+NPA YT ITFPFLFA+
Sbjct: 617 STVPSIIQTMETTKKPPTYFQTNKFTSGFQNIVNAYGIATYREVNPALYTCITFPFLFAI 796
Query: 406 MFGDFGHGILMTLFAVWMVLRESRILSQKHENEMFSMVFSG 446
MFGD GHG++M LF +WM+ E ++ +NE+ + FSG
Sbjct: 797 MFGDAGHGLIMALFGMWMIYSERSF--KRSDNEI-ANTFSG 910
Score = 173 bits (438), Expect(2) = e-148, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 112/163 (68%), Gaps = 2/163 (1%)
Frame = +1
Query: 444 FSGRYIILLMGLFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFTQGNWT--EETLLGSSVL 501
F GRYII LMGLFSIYTGLIYND +SKSLNIFGS+W + + N T E+ L
Sbjct: 904 FGGRYIITLMGLFSIYTGLIYNDVYSKSLNIFGSAWRMGDYDLKPNATYPEQFTLDPLYF 1083
Query: 502 QLNPAIPGVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHI 561
N PYPFG+DP+W + NK+ FLNS KMK++VI+GI M+FG+ LSLFNH+
Sbjct: 1084 YRNHT-------PYPFGVDPVWQASKNKIAFLNSLKMKLAVIIGISQMMFGICLSLFNHL 1242
Query: 562 YFKKPLNIYFGFIPEIIFMSSLFGYLVILIFYKWTAYDAHSSR 604
+F++ LNI+ FIPE+IF+ LFGYLV LIFYKW Y+ S
Sbjct: 1243 HFRRYLNIFVEFIPEVIFLGCLFGYLVGLIFYKWVYYEPQDSE 1371
>28221
Length = 1258
Score = 174 bits (440), Expect(3) = 1e-77, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 131/223 (58%), Gaps = 17/223 (7%)
Frame = -2
Query: 628 MLYSGQKGIQCFLIVVAMLCVPWMLLFKPLILRHQYLRKKHLGTLNFGGIR-----VGNG 682
++Y QKG+Q L+ +A+L VP +LLFKPL L++Q K T+ G R + N
Sbjct: 711 IIYDSQKGVQMALLAMALLSVPVLLLFKPLYLKYQNRLKV---TVQLQGSRATDALIANE 541
Query: 683 PTEEDAEIIQHDQLSTHSEDAEEPTED--------EVFDFGDTMVHQAIHTIEYCLGCIS 734
T + + + +++ E+A+ T + E FDFG+ +HQAIHTIE+CLGCIS
Sbjct: 540 GTADSDTMPPNRSVNSEDEEAQAGTTNIFLLVEEEEEFDFGEIFIHQAIHTIEFCLGCIS 361
Query: 735 NTASYLRLWALSLAHAQLSEVLWTMVIHIGLHVR----SXXXXXXXXXXXXXXXXXXXXX 790
+TASYLRLWALSLAHAQLSEVLW+MV+ +GL +
Sbjct: 360 HTASYLRLWALSLAHAQLSEVLWSMVLSLGLKMELSFFPSLGALPIFALWFFWANLTIAI 181
Query: 791 XXXMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 833
MEGLSAFLH LRLHWVEFQ+KFY G G F PF+F I +
Sbjct: 180 LLLMEGLSAFLHTLRLHWVEFQSKFYEGDGVLFNPFTFNDILQ 52
Score = 126 bits (317), Expect(3) = 1e-77, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%)
Frame = -1
Query: 514 PYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKPLNIYFGF 573
PYPFG+DP+W + NK+ FLNS KMK++VI+GI M+FG+ LSLFNH++F++ LNI+ F
Sbjct: 1102 PYPFGVDPVWQASKNKIAFLNSLKMKLAVIIGISQMMFGICLSLFNHLHFRRYLNIFVEF 923
Query: 574 IPEIIFMSSLFGYLVILIFYKWTAYDAHSSRNAP 607
IPE+IF+ LFGYLV LIFYKW Y+ R P
Sbjct: 922 IPEVIFLGCLFGYLVGLIFYKWVYYEPPRLRVCP 821
Score = 30.4 bits (67), Expect(3) = 1e-77, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 606 APSLLIHFINMFLFSYPESGNA 627
P+LLIH+INMF+ +Y E N
Sbjct: 824 PPALLIHYINMFMMTYNERPNG 759
>30032
Length = 469
Score = 102 bits (255), Expect = 5e-22, Method: Composition-based stats.
Identities = 54/115 (46%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Frame = +2
Query: 646 LCVPWMLLFKPLILRHQYLRKKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDAEE 705
+CVPWM+ FKP +RHQ G + V +G +++ HDQ H+ D
Sbjct: 2 MCVPWMMFFKPFYMRHQ----ARFGQFKHQPLSVQSG------DLLNHDQEVVHNNDTAR 151
Query: 706 PTEDE----VFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVL 756
P +E FDF + VHQ +HTIE+CLGCIS+TASYLRLWALSLAHA+ S V
Sbjct: 152 PPPEEEEQEAFDFSEVFVHQVVHTIEFCLGCISHTASYLRLWALSLAHARKSGVF 316
>32691
Length = 295
Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 44 VNVFQRKFVNEVRRCEEMDRKLRFVEKEIRKANIPIMDTGENP 86
V++ Q F+ + CE + +R KEI++ + IM GENP
Sbjct: 154 VDLLQHDFIKKAEACEILQAMIR-EAKEIQEMQMQIMSNGENP 279
>09801
Length = 1599
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 244 LYPCPETPQERKEMASGVNTRIDDLQMVLNQTEDHRQ 280
++PC E RK+ +S +NT DL +L + HR+
Sbjct: 1595 IFPCKEQAYSRKDGSSSINTASLDLFSLLGVDDIHRK 1485
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|157951741|ref|NP_033934.2| catalase [Mus musculus]
(527 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13683 517 e-147
07434 207 3e-71
21138 48 8e-06
12141 33 0.24
33005 28 7.9
>13683
Length = 1237
Score = 517 bits (1331), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/353 (68%), Positives = 289/353 (81%)
Frame = +1
Query: 32 GNPIGDKLNIMTAGSRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDI 91
G P+G+KL +T G RGP+L+QD VFTDEMAHF+RERIPERVVHAKG+GAFGYFEVTHDI
Sbjct: 4 GCPVGNKLASLTVGPRGPILLQDFVFTDEMAHFNRERIPERVVHAKGSGAFGYFEVTHDI 183
Query: 92 TRYSKAKVFEHIGKRTPIAVRFSTVTGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTP 151
T+Y KAK+F +GK+TP+AVRFSTV GE GSADT RDPRGFAVKFYTE+GNWDLVGNNTP
Sbjct: 184 TKYCKAKIFSKVGKKTPLAVRFSTVGGEKGSADTARDPRGFAVKFYTEEGNWDLVGNNTP 363
Query: 152 IFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRH 211
IFFIRD ILFPSFIH+QKRNP T+LKD DM WDF SLRPE+ HQVSFLFSDRG PDG+RH
Sbjct: 364 IFFIRDPILFPSFIHTQKRNPATNLKDXDMFWDFISLRPETTHQVSFLFSDRGTPDGYRH 543
Query: 212 MNGYGSHTFKLVNADGEAVYCKFHYKTDQGIKNLPVGEAGRLAQEDPDYGLRDLFNAIAN 271
MNGYGSHTFKLVN +AVYCKFH+KTDQGIKN+ +AG ++ DPDY RDL+NAIA+
Sbjct: 544 MNGYGSHTFKLVNDKNQAVYCKFHFKTDQGIKNMMADKAGEISGTDPDYAQRDLYNAIAD 723
Query: 272 GNYPSWTFYIQVMTFKEAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNKNPVNYFAEVEQ 331
++PSWT +IQVMTF++AE + +NPFDLTKVWP ++PLIPVGK+VL++NP NYFAEVEQ
Sbjct: 724 KHFPSWTLHIQVMTFQQAEKYRWNPFDLTKVWPQSEFPLIPVGKMVLDRNPKNYFAEVEQ 903
Query: 332 MAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVNCPYRARVA 384
+AF P +M PG+EPS K + + ++ TH G + +CP A +
Sbjct: 904 IAFSPVHMVPGVEPSLTKCCR-VVCSHTQTH---TGIVWAATTCSCPSTAPIT 1050
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 66/88 (75%)
Frame = +3
Query: 347 PDKMLQGRLFAYPDTHRHRLGPNYLQIPVNCPYRARVANYQRDGPMCMHDNQGGAPNYYP 406
PDKMLQGRLF+Y DTHRHRLG NYLQ+PVNCPY + NYQRDGP C+ DNQG APNYYP
Sbjct: 948 PDKMLQGRLFSYSDTHRHRLGSNYLQLPVNCPYNTKARNYQRDGPQCVDDNQGDAPNYYP 1127
Query: 407 NSFSAPEQQRSALEHSVQCAVDVKRFNS 434
NSFS P LE + DV+R+N+
Sbjct: 1128 NSFSGPVDNVKHLECPAHVSGDVQRYNT 1211
>07434
Length = 864
Score = 207 bits (526), Expect(2) = 3e-71, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 120/173 (69%), Gaps = 5/173 (2%)
Frame = +3
Query: 342 GIEPSPDKMLQ-----GRLFAYPDTHRHRLGPNYLQIPVNCPYRARVANYQRDGPMCMHD 396
G+EPSPDKMLQ GRLF+Y DTHRHRLG NYLQ+PVNCPY + NYQRDGP C+ D
Sbjct: 150 GVEPSPDKMLQLWLLQGRLFSYSDTHRHRLGSNYLQLPVNCPYNTKARNYQRDGPQCVDD 329
Query: 397 NQGGAPNYYPNSFSAPEQQRSALEHSVQCAVDVKRFNSANEDNVTQVRTFYTKVLNEEER 456
NQG APNYYPNSFS P LE + DV+R+N+A++DN TQ TF+ KVL ER
Sbjct: 330 NQGDAPNYYPNSFSGPVDNVKHLECPAHVSGDVQRYNTADDDNFTQTGTFWNKVLKVNER 509
Query: 457 KRLCENIAGHLKDAQLFIQKKAVKNFTDVHPDYGARIQALLDKYNAEKPKNAI 509
RL ENIAGH+KDA+ FIQ++AV NF ++G ++Q LD Y + N +
Sbjct: 510 TRLVENIAGHMKDAKDFIQQRAVANFAKADAEFGKQLQKALDDYKKKTQTNGV 668
Score = 80.5 bits (197), Expect(2) = 3e-71, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = +2
Query: 294 FNPFDLTKVWPHKDYPLIPVGKLVLNKNPVNYFAEVEQMAFDPSNMPPG 342
+NPFDLTKVWP ++PLIPVGK+VL++NP NYFAEVEQ+AF P +M PG
Sbjct: 5 WNPFDLTKVWPQSEFPLIPVGKMVLDRNPKNYFAEVEQIAFSPVHMVPG 151
>21138
Length = 388
Score = 48.1 bits (113), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +2
Query: 451 LNEEERKRLCENIAGHLKDAQLFIQKKAVKNFTDVHPDYGARIQALLDKYNAEK 504
L+ +KRL +NIA +L +A F+Q++AVKNFT VH D+G + L+ + K
Sbjct: 17 LDNCAKKRLVQNIADNLSNASQFLQERAVKNFTMVHADFGRMLTEALNLIKSAK 178
>12141
Length = 935
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 35 IGDKLNIMTAGSRGPL-LVQDVVFTDEMAHFDRERIP-ERVVHAKGAGAFGYFEVTHDIT 92
+G I+T G G + L + ++M + +P ++VV GAG + H+
Sbjct: 413 MGANTVILTMGKLGAVCLTKQARTVEDMIYEPAPHVPADKVVDTTGAGDAFIGALAHNFA 234
Query: 93 RYSKAKVFEHIGKRTPIAVRFSTVTGESGS 122
RY + K+FEHI +A + + G S
Sbjct: 233 RYPQQKLFEHIAAACVVASKSVQLPGTQAS 144
>33005
Length = 786
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 162 PSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGH 209
P+ IHS +PQT+ P ++ + P+S+H + L +G P GH
Sbjct: 365 PTQIHS--VSPQTYKHTPSLIHPSHTNNPKSMHDILVLADRKGPPPGH 228
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|34610207|ref|NP_666329.2| alanyl-tRNA synthetase [Mus
musculus]
(968 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05919 520 e-147
33800 54 3e-07
17051 30 3.2
13135 30 5.8
32306 29 8.3
>05919
Length = 1196
Score = 520 bits (1338), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/401 (66%), Positives = 315/401 (78%), Gaps = 1/401 (0%)
Frame = -3
Query: 282 KVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNA 341
+VG +D DGIDMAYRVLADHART+TVAL+DGGRPDN GRGYVLRR+LRRAVRY+ EKLNA
Sbjct: 1194 RVGKDDVDGIDMAYRVLADHARTLTVALSDGGRPDNAGRGYVLRRVLRRAVRYATEKLNA 1015
Query: 342 SRGFFATLVDVVVQSLGDAFPELKKDPEMVKDIINEEEVQFLKTLSRGRRILDRKIQSLG 401
G FA+LVD VVQ LG+AFPE++KDPE VK+IINEEE QFLKTLSRG+++L R I LG
Sbjct: 1014 KPGMFASLVDTVVQLLGEAFPEVRKDPETVKEIINEEEAQFLKTLSRGQKLLLRTISKLG 835
Query: 402 DCKTI-PGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQLKSQGKGAGDE 460
++ PGD AW LYDTYGFPVDLT L++EEKGL +D GFE+ ++ + L SQ G+ +
Sbjct: 834 SSTSVLPGDVAWRLYDTYGFPVDLTLLMSEEKGLSIDNEGFEKAKQHSLLMSQAGGSTVD 655
Query: 461 DLIMLDIYAIEELRAKGLEATDDSPKYNYQSDSSGSYVFECTVATVLALRREKMFVDEVV 520
D I L++++I EL+ +G+ TDDSPKYNY +D G+Y FE V+ALR K FVDEV
Sbjct: 654 DQISLEVHSINELQNRGIAPTDDSPKYNYTADVEGNYQFESCAGKVIALRYNKAFVDEVT 475
Query: 521 TGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY 580
+GQECGV+LDKTCFYAEQGGQIYDEG+LVK E++ EF VKN QVRGGYVLHIG I
Sbjct: 474 SGQECGVLLDKTCFYAEQGGQIYDEGFLVK---EGEEEVEFKVKNVQVRGGYVLHIGVIE 304
Query: 581 GNLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLGEADQKGSLVAPDRLRFDFTA 640
G LKVGD ++L IDE RR VM NHT TH+LNF LRSVL EADQ+GSLVAPDRLRFDFTA
Sbjct: 303 GTLKVGDTMKLTIDESRRCAVMKNHTGTHMLNFGLRSVLKEADQRGSLVAPDRLRFDFTA 124
Query: 641 KGAMSTQQIKKAEEIVNGMIEAAKPVYTQDCPLAAAKAIQG 681
KGAM Q++K EE+VN M + VY Q+ LA AK+IQG
Sbjct: 123 KGAMKIQEVKNVEEVVNNMASKNEEVYGQEMGLALAKSIQG 1
>33800
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 43/55 (78%)
Frame = -1
Query: 826 MDDLDRASKADVQKRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKT 880
+DD+D+A KA + V+E++K++I+++PNQ V+ + +G++AKAL+ A+K +K+
Sbjct: 170 VDDMDKARKAAIMNEVVEESKRMIEASPNQKFVVHQFSAGSNAKALDGAIKQYKS 6
>17051
Length = 406
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -2
Query: 880 THSPQTSAMLFTVDNEAGKITCLCQVPQNAANRGLKASEWVQ 921
TH QT A++ T + + CLC V N R L+ W Q
Sbjct: 270 THYTQTCAVIHTRAHPLVNLMCLCNVLNN*NARKLQNERWCQ 145
>13135
Length = 849
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = -1
Query: 358 GDAFPELKKDPEMVKDIIN---EEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLL 414
G+ E+ KD ++ + N ++EVQ++ T+ R G +TIP A
Sbjct: 693 GNIISEINKDVQLXCVVENKPIDKEVQWVGTVVRN-----------GTTRTIPVSIATRS 547
Query: 415 YDTYGFPVDLTGLIAE----EKGLVVDMNGFEEERRLAQLKSQGKGAGDEDLIMLDIYAI 470
YD + + +DL + + G V D + + QL +Q L+++ + I
Sbjct: 546 YDPFKYSIDLPSPTSWRLRIQNGQVTDEGVYTCQ---VQLSNQNYAKAFHQLVIIQMPQI 376
Query: 471 EEL 473
+L
Sbjct: 375 SDL 367
>32306
Length = 441
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 34 LDDPTLLFANAGMNQFKPI--FLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
+DD T +AN +N KPI F T+ P + +++ A Q + A + D +D ++
Sbjct: 28 IDDLTQRYANIEVNVSKPIVPFRETVIPRPKVDRVNEAIQDQNTVLASARLKDFED-DRE 204
Query: 92 VYHHTFFEMLGSWSFGDYFK 111
V ML + G +FK
Sbjct: 205 VXDEGLVSMLTPNTSG-WFK 261
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31560653|ref|NP_032852.2| phosphofructokinase, liver,
B-type [Mus musculus]
(780 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03664 514 e-146
05449 353 1e-97
>03664
Length = 1237
Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust.
Identities = 249/384 (64%), Positives = 298/384 (77%), Gaps = 1/384 (0%)
Frame = +3
Query: 7 EKLRMSG-AGKAIGVLTSGGDAQGMNAAVRAVTRMGIYVGAKVFLIXXXXXXXXXXXXNI 65
+K++ G G IGV TSGGD+QGMN AVRAV RMG Y+G KV++I NI
Sbjct: 75 QKIQAGGWVGNTIGVFTSGGDSQGMNGAVRAVVRMGFYLGCKVYVIREGYQGMVDGGENI 254
Query: 66 KPANWLSVSNIIQLGGTIIGSARCKAFTTREGRLAAAYNLLQHGITNLCVIGGDGSLTGA 125
+ A W SVS I+QLGGT+IGSAR F REGRL AA NL++ GITNL VIGGDGSLTGA
Sbjct: 255 EEATWASVSGILQLGGTVIGSARSADFRQREGRLKAAANLVKRGITNLVVIGGDGSLTGA 434
Query: 126 NIFRNEWGSLLEELVKEGKISESTAQNYAHLTIAGLVGSIDNDFCGTDMTIGTDSALHRI 185
++FR EW SLL EL ++G+++ HL I G+VGSIDNDFCGTDMTIGTDSALHRI
Sbjct: 435 DLFRREWASLLTELKEKGELTGDEMVRCQHLNIVGMVGSIDNDFCGTDMTIGTDSALHRI 614
Query: 186 MEVIDAITTTAQSHQRTFVLEVMGRHCGYLALVSALASGADWLFIPEAPPEDGWENFMCE 245
+E +DAI+TTA SHQR FV+EVMGRHCGYLALV+ALA ADW+FIPE PPE W+ +C
Sbjct: 615 IEAVDAISTTAISHQRAFVMEVMGRHCGYLALVAALACEADWVFIPEWPPEGDWKTTLCN 794
Query: 246 RLGETRSRGSRLNIIIIAEGAIDRHGKPISSSYVKDLVVQRLGFDTRVTVLGHVQRGGTP 305
+L R G RLNII++AEGAIDR G I+S VKDL+ L +DTRVTVLGHVQRGG+P
Sbjct: 795 KLLSERKLGQRLNIILVAEGAIDREGNSITSDQVKDLLTNELKYDTRVTVLGHVQRGGSP 974
Query: 306 SAFDRILSSKMGMEAVMALLEATPDTPACVVSLSGNQSVRLPLMECVQVTKDVQKAMDEE 365
SAFDRIL S+MG EAV+AL++ATPDTPACVVSL GNQ+VR+PLMECV TKDVQKAMD +
Sbjct: 975 SAFDRILGSRMGAEAVLALMDATPDTPACVVSLEGNQTVRVPLMECVSRTKDVQKAMDMK 1154
Query: 366 RFDEAIQLRGRSFENNWKIYKLLA 389
F+EA+QLRG+SF+NN Y++L+
Sbjct: 1155NFEEAVQLRGKSFQNNLTTYRMLS 1226
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 184/365 (50%), Gaps = 30/365 (8%)
Frame = +3
Query: 401 SLAILNVGAPAAGMNAAVRSAVRTGISEGHTVYIVHDGFEGLAKG--QVQEVGWHDVAGW 458
++ + G + GMN AVR+ VR G G VY++ +G++G+ G ++E W V+G
Sbjct: 108 TIGVFTSGGDSQGMNGAVRAVVRMGFYLGCKVYVIREGYQGMVDGGENIEEATWASVSGI 287
Query: 459 LGRGGSMLGTKRTLPKPHLEAIVE---NLRTYNIHALLVIGGFEAYEG----------VL 505
L GG+++G+ R+ E ++ NL I L+VIGG + G +L
Sbjct: 288 LQLGGTVIGSARSADFRQREGRLKAAANLVKRGITNLVVIGGDGSLTGADLFRREWASLL 467
Query: 506 QLVEARG--------RYEELCIVMCVIPATISNNVPGTDFSLGSDTAVNAAMESCDRIKQ 557
++ +G R + L IV V +I N+ GTD ++G+D+A++ +E+ D I
Sbjct: 468 TELKEKGELTGDEMVRCQHLNIVGMV--GSIDNDFCGTDMTIGTDSALHRIIEAVDAIST 641
Query: 558 SASGTKRRVFIVETMGGYCGYLATVTGIAVGADAAYVFEDPFNIHDLKANV-EHMTEKMK 616
+A + +R F++E MG +CGYLA V +A AD ++ E P D K + + + K
Sbjct: 642 TAI-SHQRAFVMEVMGRHCGYLALVAALACEADWVFIPEWPPE-GDWKTTLCNKLLSERK 815
Query: 617 TDIQRGLVLRNEKCHEH----YTTEFLYNLYSSEGRGVFDCRTNVLGHLQQGGAPTPFDR 672
+ ++L E + T++ + +L ++E + +D R VLGH+Q+GG+P+ FDR
Sbjct: 816 LGQRLNIILVAEGAIDREGNSITSDQVKDLLTNELK--YDTRVTVLGHVQRGGSPSAFDR 989
Query: 673 NYGTKLGVKAMLWVSEKLRDVYRKGRVFANAPDS-ACVIGLRKKVVAFSPVTE-LKKETD 730
G+++G +A+L + + PD+ ACV+ L P+ E + + D
Sbjct: 990 ILGSRMGAEAVLALMDA-------------TPDTPACVVSLEGNQTVRVPLMECVSRTKD 1130
Query: 731 FEHRM 735
+ M
Sbjct: 1131VQKAM 1145
>05449
Length = 724
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 165/237 (69%), Positives = 196/237 (82%), Gaps = 5/237 (2%)
Frame = +3
Query: 158 IAGLVGSIDNDFCGTDMTIGTDSALHRIMEVIDAITTTAQSHQRTFVLEVMGRHCGYLAL 217
I G+VGSIDNDFCGTDMTIGTDSALHRI+E +DAI+TTA SHQR FV+EVMGRHCGYLAL
Sbjct: 3 IVGMVGSIDNDFCGTDMTIGTDSALHRIIEAVDAISTTAISHQRAFVMEVMGRHCGYLAL 182
Query: 218 VSALASGADWLFIPEAPPEDGWENFMCERLGET-----RSRGSRLNIIIIAEGAIDRHGK 272
V+ALA ADW+FIPE PPE W+ +C +L + R G RLNII++AEGAIDR G
Sbjct: 183 VAALACEADWVFIPEWPPEGDWKTTLCNKLLSSVALQERKLGQRLNIILVAEGAIDREGN 362
Query: 273 PISSSYVKDLVVQRLGFDTRVTVLGHVQRGGTPSAFDRILSSKMGMEAVMALLEATPDTP 332
I+S VKDL+ L +DTRVTVLGHVQRGG+PSAFDRIL S+MG EAV+AL++ATPDTP
Sbjct: 363 SITSDQVKDLLTNELKYDTRVTVLGHVQRGGSPSAFDRILGSRMGAEAVLALMDATPDTP 542
Query: 333 ACVVSLSGNQSVRLPLMECVQVTKDVQKAMDEERFDEAIQLRGRSFENNWKIYKLLA 389
ACVVSL GNQ+VR+PLMECV TKDVQKAMD + F+EA+QLRG+SF+NN Y++L+
Sbjct: 543 ACVVSLEGNQTVRVPLMECVSRTKDVQKAMDMKNFEEAVQLRGKSFQNNLTTYRMLS 713
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Frame = +3
Query: 527 TISNNVPGTDFSLGSDTAVNAAMESCDRIKQSASGTKRRVFIVETMGGYCGYLATVTGIA 586
+I N+ GTD ++G+D+A++ +E+ D I +A + +R F++E MG +CGYLA V +A
Sbjct: 21 SIDNDFCGTDMTIGTDSALHRIIEAVDAISTTAI-SHQRAFVMEVMGRHCGYLALVAALA 197
Query: 587 VGADAAYVFEDPFN-------IHDLKANVEHMTEKMKTDIQRGLVLRNEKCHE--HYTTE 637
AD ++ E P + L ++V K+ + LV E T++
Sbjct: 198 CEADWVFIPEWPPEGDWKTTLCNKLLSSVALQERKLGQRLNIILVAEGAIDREGNSITSD 377
Query: 638 FLYNLYSSEGRGVFDCRTNVLGHLQQGGAPTPFDRNYGTKLGVKAMLWVSEKLRDVYRKG 697
+ +L ++E + +D R VLGH+Q+GG+P+ FDR G+++G +A+L + +
Sbjct: 378 QVKDLLTNELK--YDTRVTVLGHVQRGGSPSAFDRILGSRMGAEAVLALMDA-------- 527
Query: 698 RVFANAPDS-ACVIGLRKKVVAFSPVTELKKET 729
PD+ ACV+ L P+ E T
Sbjct: 528 -----TPDTPACVVSLEGNQTVRVPLMECVSRT 611
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|61651673|ref|NP_077184.2| source of immunodominant
MHC-associated peptides [Mus musculus]
(823 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08971 515 e-146
25627 30 2.9
27704 30 4.3
30147 29 8.4
>08971
Length = 3836
Score = 515 bits (1326), Expect = e-146, Method: Compositional matrix adjust.
Identities = 246/439 (56%), Positives = 316/439 (71%), Gaps = 8/439 (1%)
Frame = -3
Query: 61 QPAGWQSLLSFTILFLAWLAGFSSRLFAVIRFESIIHEFDPWFNYRSTHHLASHGFYEFL 120
P +LL +L +A + FS+RLF+V+RFES+IHEFDP+FNYR+T LA GFY F
Sbjct: 3702 SPDKQDTLLKMMVLAIAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFYNFH 3523
Query: 121 NWFDERAWYPLGRIVGGTVYPGLMITAGLIHWILNTLNITVHIRDVCVFLAPTFSGLTSI 180
NWFD+RAWYPLGRI+GGT+YPGLM+T+ I+ +LN NIT+ +R+VCVFLAP FS T+I
Sbjct: 3522 NWFDDRAWYPLGRIIGGTIYPGLMVTSAAIYHVLNFFNITIDVRNVCVFLAPLFSSFTTI 3343
Query: 181 STFLLTRELWNQGAGLLAACFIAIVPGYISRSVAGSFDNEGIAIFALQFTYYLWVKSVKT 240
TF LT+EL + AGL+AA +AIVPGYISRSVAGS+DNEGIAIF + TYYLW+K+VKT
Sbjct: 3342 VTFFLTKELKDASAGLVAASMLAIVPGYISRSVAGSYDNEGIAIFCMLLTYYLWIKAVKT 3163
Query: 241 GSVFWTMCCCLSYFYMVSAWGGYVFIINLIPLHVFVLLLMQRYSKRVYIAYSTFYIVGLI 300
GS++W C L+YFYMVS+WGGYVF+INLIPLHV L++ R+S ++Y+AYST Y +G +
Sbjct: 3162 GSIYWGALCSLAYFYMVSSWGGYVFLINLIPLHVLALMVTGRFSHKIYLAYSTVYCLGTL 2983
Query: 301 LSMQIPFVGFQPIRTSEHMAAAGVXXXXXXXXXXXXXRDRLTKQEFQTLFFLGVSLAAGA 360
LSMQI FVGFQP+++SEHMAA GV R RL++++F LF V L
Sbjct: 2982 LSMQISFVGFQPVQSSEHMAALGVFGLCQIHAFVDYLRSRLSREQFNLLFRSLVLLTGTI 2803
Query: 361 VFLSVIYLTYTGYIAPWSGRFYSLWDTGYAKIHIPIIASVSEHQPTTWVSFFFDLHILVC 420
F + T G I+PW+GRFYSL D YAK +IPIIASVSEHQPTTW SF+FDL +LV
Sbjct: 2802 AFGAAAVATAMGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSFYFDLQLLVF 2623
Query: 421 TFPAGLWFCIKNINDERVFVALYAISAVYFAGVMVRLMLTLTPVVCMLSAIAFSNVFEHY 480
FP GL+FC + D +F+ +Y ++++YFAGVMVRLML L PV+C+LS I S + Y
Sbjct: 2622 MFPVGLYFCFSKLTDANIFIVMYGVTSIYFAGVMVRLMLVLAPVMCILSGIGVSAILTAY 2443
Query: 481 LGD--------DMKRENPP 491
+ + + K PP
Sbjct: 2442 MKNLDSSRKDKNXKNRTPP 2386
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/272 (52%), Positives = 177/272 (65%), Gaps = 3/272 (1%)
Frame = -2
Query: 507 LYDKAGKVRKHVTEQEKPEEG--LGPNIKSIVTXXXXXXXXXFAVHCTWVTSNAYSSPSV 564
L++K +++ E +KP+ L I + V + HCTWVTS AYSSPS+
Sbjct: 2446 LHEKP-RLQPQRQEPKKPDSTYPLKNEIANGVILIITAFLILYTFHCTWVTSEAYSSPSI 2270
Query: 565 VLASYNHDGTRNILDDFREAYFWLRQNTDEHARVMSWWDYGYQIAGMANRTTLVDNNTWN 624
VL++ DG+R I DDFREAY+WLR NT E+++VMSWWDYGYQI MANRT LVDNNTWN
Sbjct: 2269 VLSARGGDGSRIIFDDFREAYYWLRHNTPENSKVMSWWDYGYQITAMANRTILVDNNTWN 2090
Query: 625 NSHIALVGKAMSSNETAAYKIMRSLDVDYVLVIFGGVIGYSGDDINKFLWMVRI-AEGEH 683
N+HI+ VG+AM+S E + R+ L F + LWMVRI +
Sbjct: 2089 NTHISRVGQAMASTEESVRDNARA*R-QLRLSDFWWPHWLLLRRHQQVLWMVRIGGSTDR 1913
Query: 684 PKDIREGDYFTQQGEFRVDKAGSPTLLNCLMYKMSYYRFGEMQLDFRTPPGFDRTRNAEI 743
K I E DY+T QGEFRVD+ GSP LLNCLMYKM YYRFG + + P G+DR RNAEI
Sbjct: 1912 GKHIHEMDYYTPQGEFRVDREGSPVLLNCLMYKMCYYRFGAVYTESGQPTGYDRVRNAEI 1733
Query: 744 GNKDIKFKHLEEAFTSEHWLVRIYKVKAPDNR 775
GNKD + LEEA+T+EHWLVRIYKVK +NR
Sbjct: 1732 GNKDFELDVLEEAYTTEHWLVRIYKVKDLENR 1637
>25627
Length = 390
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 381 FYSLWDTGYAKIHIPIIASVSEHQPTTWVSFFFDLHILVCTF 422
+Y + Y +H I VS++QP T F H +CT+
Sbjct: 224 YYCAYTHTYLSLHAQIDIHVSQNQPRTHTHLFLSTHTCMCTY 99
>27704
Length = 646
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 495 SSDEDDKRNPGNLYDKAGKVRKHVTEQEKPEEGLGPNI 532
S DEDD NP N D+ KH +K E+ N+
Sbjct: 131 SVDEDDNNNPENRTDRTTASSKHDGMSQKTEDNTTDNV 244
>30147
Length = 526
Score = 28.9 bits (63), Expect = 8.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = -2
Query: 245 WTMCCCLSYFYMVSAWGGYVFIINLIPLHVFVLLLM 280
+++CC LS F+ + + YVF ++L+ +++ LL +
Sbjct: 258 YSVCCFLSPFFKIKSHCIYVFYLSLVLVNILSLLFL 151
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6671684|ref|NP_031640.1| catenin (cadherin associated
protein), beta 1, 88kDa [Mus musculus]
(781 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14657 508 e-144
15086 295 5e-80
12505 116 5e-30
38361 107 9e-28
17600 104 1e-22
12579 96 4e-20
36452 46 7e-05
28685 35 0.10
36960 29 6.3
>14657
Length = 918
Score = 508 bits (1308), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/305 (82%), Positives = 272/305 (89%), Gaps = 1/305 (0%)
Frame = -3
Query: 102 TLDEGMQIPSTQFDAAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLN 161
TL EG+QIPSTQ PT VQRL+EPSQMLKHAVVNLINYQDDA+LATRAIPEL KLL
Sbjct: 916 TLPEGVQIPSTQVHPDEPTAVQRLSEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLX 737
Query: 162 DEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNL 221
DED VVV +AA+MVHQLSKKEASRHAIM SPQM++A++R M NT D+ET RC AGTLHNL
Sbjct: 736 DEDXVVVYQAAMMVHQLSKKEASRHAIMNSPQMIAALIRAMANTEDIETTRCAAGTLHNL 557
Query: 222 SHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQK 281
SHHR+GLLAIFKSGGIPALVK+L SP++SVLFYAITTLHNLLLHQEG+KMAVRLAGGLQK
Sbjct: 556 SHHRQGLLAIFKSGGIPALVKLLSSPMESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQK 377
Query: 282 MVALLNK-TNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTT 340
MVALL + NVKFLAITTDCLQILAYGNQESKLIILASGGP LV IM++YTYEKLLWTT
Sbjct: 376 MVALLQRNNNVKFLAITTDCLQILAYGNQESKLIILASGGPGELVRIMKSYTYEKLLWTT 197
Query: 341 SRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEG 400
SRVLKVLSVC SNKPAIVEAGGMQAL +HL SQRLVQNCLW+LRNLSDAATK + MEG
Sbjct: 196 SRVLKVLSVCPSNKPAIVEAGGMQALAMHLGHQSQRLVQNCLWSLRNLSDAATKMDNMEG 17
Query: 401 LLGTL 405
LL L
Sbjct: 16 LLHML 2
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Frame = -3
Query: 370 LTDPSQRLVQNC--LWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNL 427
L++PSQ L L ++ +D AT+ + L++LL +D VV AA ++ L
Sbjct: 847 LSEPSQMLKHAVVNLINYQDDADLATRA------IPELIKLLXDEDXVVVYQAAMMVHQL 686
Query: 428 TCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQEAEMAQNAV 485
+ ++ I AL+R + + EDI E CA H S H++ +A +
Sbjct: 685 SKKEASRHAIMNSPQMIAALIRAM---ANTEDI-ETTRCAAGTLHNLSHHRQGLLA---I 527
Query: 486 RLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVR 542
G+P +VKLL P L A L L + +R G + ++V LL R
Sbjct: 526 FKSGGIPALVKLLSSPMESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVALLQR 356
>15086
Length = 548
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 143/171 (83%), Positives = 159/171 (92%), Gaps = 1/171 (0%)
Frame = +1
Query: 152 AIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETA 211
AIPEL KLL+DEDQVVV +AA+MVHQLSKKEASRHAIM SPQM++A++R + T+D+ET
Sbjct: 1 AIPELIKLLSDEDQVVVCQAAMMVHQLSKKEASRHAIMNSPQMIAALIRALATTDDMETT 180
Query: 212 RCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM 271
RC AGTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNLLLHQEG+KM
Sbjct: 181 RCAAGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKM 360
Query: 272 AVRLAGGLQKMVALLNK-TNVKFLAITTDCLQILAYGNQESKLIILASGGP 321
AVR+AGGLQKMVALL + NVKFLAITTDCLQILAYGNQESKLIILASGGP
Sbjct: 361 AVRMAGGLQKMVALLQRNNNVKFLAITTDCLQILAYGNQESKLIILASGGP 513
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%)
Frame = +1
Query: 405 LVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPA 464
L++LL +D VV AA ++ L+ ++ I AL+R + D E T A
Sbjct: 13 LIKLLSDEDQVVVCQAAMMVHQLSKKEASRHAIMNSPQMIAALIRALATTDDMET-TRCA 189
Query: 465 ICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANH 524
L +L S H++ +A + G+P +VKLL P L A L L +
Sbjct: 190 AGTLHNL-SHHRQGLLA---IFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSK 357
Query: 525 APLREQGAIPRLVQLLVR 542
+R G + ++V LL R
Sbjct: 358 MAVRMAGGLQKMVALLQR 411
>12505
Length = 836
Score = 116 bits (290), Expect(2) = 5e-30, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 60/80 (75%)
Frame = -3
Query: 592 GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKXXXXXXXXXXXXXPLTELLHSRNEGV 651
G+ + + QLLYSPIENIQRVAAGVLCELA DK PLTELLHSRNEGV
Sbjct: 732 GVGAVLRYHQLLYSPIENIQRVAAGVLCELAADKEGAEMIEQEGATAPLTELLHSRNEGV 553
Query: 652 ATYAAAVLFRMSEDKPQDYK 671
TYAAAVLFRMSEDKPQDYK
Sbjct: 552 XTYAAAVLFRMSEDKPQDYK 493
Score = 33.9 bits (76), Expect(2) = 5e-30, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 3/31 (9%)
Frame = -2
Query: 671 KKRLSVELTSSLFRTEPMAWNETA---DLGL 698
+KRLS+ELTSSL+R + M W+E D+GL
Sbjct: 496 QKRLSMELTSSLYRGDNMNWSEPPGFEDVGL 404
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/44 (84%), Positives = 43/44 (97%)
Frame = -1
Query: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITT 258
AGTLHNLSHHR+GLLAIF+SGGIPALVK+L SP++SVLFYAIT+
Sbjct: 833 AGTLHNLSHHRQGLLAIFRSGGIPALVKLLSSPMESVLFYAITS 702
>38361
Length = 227
Score = 107 bits (268), Expect(2) = 9e-28, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 55/63 (87%)
Frame = -1
Query: 457 REDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRN 516
R + ++CALRHLTSRH EAEMAQNAVRLHYGLPV+VKLLHPPS WPLIKA VGL+RN
Sbjct: 191 RTSLNLDSVCALRHLTSRHPEAEMAQNAVRLHYGLPVLVKLLHPPSRWPLIKAVVGLVRN 12
Query: 517 LAL 519
LAL
Sbjct: 11 LAL 3
Score = 34.7 bits (78), Expect(2) = 9e-28, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 447 LVRTVLRAGDREDITEP 463
VRTV++AGDREDITEP
Sbjct: 225 FVRTVMQAGDREDITEP 175
>17600
Length = 752
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 82/135 (60%), Gaps = 15/135 (11%)
Frame = +1
Query: 639 PLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAWNETA---D 695
PLT+LLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLS+ELTSSL+R + M W+E D
Sbjct: 292 PLTDLLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSMELTSSLYRGDNMNWSEPPGFED 471
Query: 696 LGLDIGAQGEALGYRQDDPSYRSFHSGGY--------GQDALGMDPMMEHEMGGHHPGA- 746
+GL + + +Q P ++ S Y G+ G D + + M G GA
Sbjct: 472 MGLLTDTSRDPMYSQQQLPPHQGSQSSMYSGSQHDMQGRPPTGYDQVPVNSMQGLDLGAA 651
Query: 747 ---DYPVDGLPDLGH 758
P+D +PDLG
Sbjct: 652 GAYGGPLDNIPDLGQ 696
>12579
Length = 1870
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 78/123 (63%), Gaps = 6/123 (4%)
Frame = +2
Query: 10 LDMAMEPDRKAAVSHWQQQSYL-DSGIHSGATTTAPSLSGKGNPEE---EDVDTSQVLYE 65
LDM ++ + WQQ YL DSGIHSGATT APS+S KG+ EE D+D ++ +++
Sbjct: 92 LDMPVD-SKHEQTMMWQQNQYLADSGIHSGATTQAPSISSKGHGEELEEGDMDPTK-MFD 265
Query: 66 WEQGFSQSFTQ--EQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDAAHPTNVQ 123
W G FT EQV +++ Q TR QRVRAA+FPE+L EG+QIPSTQ PT V
Sbjct: 266 W--GLPDPFTPQPEQVEEMNQQLNQTRPQRVRAAIFPESLPEGVQIPSTQVHPDQPTAVX 439
Query: 124 RLA 126
LA
Sbjct: 440 *LA 448
>36452
Length = 607
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Frame = +1
Query: 207 DVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQ 266
DVE ARC A L + S ++ A+ ++G IP L K+L SP + +L + TL +
Sbjct: 7 DVEVARCGALALWSCSKSKKNKEAMQRAGAIPLLAKLLKSPHEDMLIPVVGTLQE-CASE 183
Query: 267 EGAKMAVRLAGGLQKMVALLNKTNVKFLA---ITTDCLQIL--AYGNQESKLIILASGGP 321
++A+R G ++ +V L + A + C + +E++ ++ GG
Sbjct: 184 PSYRLAIRTEGMIEDLVKNLKSSVPDKPANPELQMHCASAIFKCAEEKETRDLVRQYGGL 363
Query: 322 QALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNC 381
LV ++ ++LL + + ++ N E ++ L LT+ + ++ N
Sbjct: 364 DPLVGLLNKMDNKELLAAATGAIWKCAISPENVARFQELKCIELLVALLTNQPEEVLVNV 543
Query: 382 LWTLRNLSDA 391
+ L L+ A
Sbjct: 544 VGALGELAKA 573
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 5/215 (2%)
Frame = +1
Query: 382 LWTLRNLSDAATKQEGME--GLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVC 439
LW+ S + +E M+ G + L +LL S +++ G L + ++ +
Sbjct: 40 LWSC---SKSKKNKEAMQRAGAIPLLAKLLKSPHEDMLIPVVGTLQECA-SEPSYRLAIR 207
Query: 440 QVGGIEALVRTVLRAGDREDITEPAI---CALRHLTSRHQEAEMAQNAVRLHYGLPVVVK 496
G IE LV+ L++ + P + CA + E + ++ VR + GL +V
Sbjct: 208 TEGMIEDLVKN-LKSSVPDKPANPELQMHCA--SAIFKCAEEKETRDLVRQYGGLDPLVG 378
Query: 497 LLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGT 556
LL+ + L+ A G I A+ P N A +E I LV LL T
Sbjct: 379 LLNKMDNKELLAAATGAIWKCAISPENVARFQELKCIELLVALL---------------T 513
Query: 557 QQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIR 591
Q EE++ GAL LA+ NR IR
Sbjct: 514 NQP-------EEVLVNVVGALGELAKAQPNRAQIR 597
>28685
Length = 834
Score = 35.0 bits (79), Expect = 0.10, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 7/36 (19%)
Frame = +2
Query: 753 LPDLGHAQDL----MD---GLPPGDSNQLAWFDTDL 781
LPDLG DL +D G PPGD WFDTDL
Sbjct: 23 LPDLGPGSDLNFDSIDPNLGAPPGDGGPSIWFDTDL 130
>36960
Length = 551
Score = 29.3 bits (64), Expect = 6.3, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 231 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAV 273
I +GGIP ++ L S + + AITTL L+ Q A + V
Sbjct: 321 IVTNGGIPLVINCLSSCSEETVMSAITTLMYLITPQSQAAITV 449
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|30520131|ref|NP_848818.1| solute carrier family 6
(neurotransmitter transporter, GABA), member 1 [Mus musculus]
(599 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08387 370 e-143
15924 318 5e-87
08953 304 5e-83
21405 152 2e-55
32211 206 3e-53
18526 194 9e-50
14556 153 2e-37
26872 135 5e-32
02570 135 6e-32
19604 130 2e-30
26038 114 1e-25
33291 75 9e-20
25926 83 4e-16
21870 78 9e-15
14638 74 2e-13
31151 50 3e-06
00472 31 1.5
11578 28 8.8
10280 28 9.9
>08387
Length = 4991
Score = 370 bits (950), Expect(3) = e-143, Method: Compositional matrix adjust.
Identities = 187/418 (44%), Positives = 274/418 (65%), Gaps = 18/418 (4%)
Frame = -2
Query: 199 QMTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRG 258
+++DG+D G ++W LA+ L +AWV+VY CI KG+ +GKV+Y +AT PYI ++IL R
Sbjct: 4411 KISDGIDDMGTVKWDLALCLLLAWVVVYACICKGIRSSGKVMYVTATSPYIFMLILLIRN 4232
Query: 259 VTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFXXXXXXXXXXXXXXYNSFHNNVYR 318
L GAKEG+ FY+TPN KL + EVW+DA TQIFF YN F +N YR
Sbjct: 4231 SLLDGAKEGVDFYLTPNMTKLGEMEVWVDAGTQIFFSSSIALGTLTALGSYNKFKHNSYR 4052
Query: 319 DSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASGPGLAFLAYPEAVTQLPIS 378
DS+I +NS TS FAGF++F+I+G+MA + R I DVA SGPGLAF+AYP+AV Q+P+S
Sbjct: 4051 DSVIFALVNSVTSFFAGFIVFTILGYMAKLQNRPIKDVAESGPGLAFIAYPKAVAQMPLS 3872
Query: 379 PLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRN--RRELFIAAVCIVSYLIGL 436
PLW+ILFF M+++LG+DSQF VEG +T +VD+YPRLLR R+E+FI +CI+ + +GL
Sbjct: 3871 PLWSILFFLMVILLGLDSQFVGVEGVVTTIVDQYPRLLRKGYRKEIFIGFICIIMFFVGL 3692
Query: 437 SNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDNIQEMVGS----RP 492
+ ++ GG+YVF+LFDYYS S + +L + FFE + IS+ YGV RF DNI+ M+G +
Sbjct: 3691 AMVSNGGMYVFQLFDYYSGSRI-ILLVAFFELIGISYIYGVFRFLDNIKMMLGDHWMVKT 3515
Query: 493 CIWWKLCWSFFTPIIVAGVFLFSAVQMT------PLTMGSYVFPKWGQGVGWLMALSSMV 546
+ +CW+ +P +F+ SA+ + P + G+YV+P W G+GW +A SS V
Sbjct: 3514 LPFMVVCWTVLSPAFCIAIFVMSAINYSELDYARPGSKGTYVYPDWAVGIGWALAASSAV 3335
Query: 547 LIPGYMAYMFLTLKGSLKQRLQVMIQP---SEDIVRPENGPEQPQAG---SSASKEAY 598
IP Y ++ G+ + L+++ +P E +R ++ E+ A A +++Y
Sbjct: 3334 WIPIVAIYKWVK-NGATLEALKLLCKPYGLKEHQLREQDKGERTLADLERERAGEQSY 3164
Score = 114 bits (286), Expect(3) = e-143, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 82/116 (70%), Gaps = 5/116 (4%)
Frame = -1
Query: 81 AFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYY 140
AFLIPYF+ +IF G+PLF LE ++GQ+ + GGL W L P+ +G+GLA+ ++ F+LN YY
Sbjct: 4790 AFLIPYFICVIFGGIPLFYLEVAVGQFMNRGGLQAWNLVPILQGIGLASCIIVFFLNCYY 4611
Query: 141 IVIISWAIYYLYNSFTTTLPWKQCDNPWNTDR-CFSNY-SLVNTT---NMTSAVVE 191
VI++WA YY ++SFT+ LPW+ CD+ WN C ++ + VN T N+T +V+
Sbjct: 4610 NVILTWAFYYFFSSFTSELPWETCDHDWNNKTVCAVDFQAKVNETGDPNITKILVD 4443
Score = 63.2 bits (152), Expect(3) = e-143, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = -3
Query: 35 QKKAGDLPDRDTWKGRFDFLMSCVGYAIGLGNVWRFPYLCGKNGGG 80
++ DL R+ W FDFL++C+G+++GLGNVWRFPYLC KNG G
Sbjct: 4926 DEEGKDLNKREQWGRAFDFLLACIGFSVGLGNVWRFPYLCYKNGEG 4789
>15924
Length = 2588
Score = 318 bits (814), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/428 (39%), Positives = 257/428 (60%), Gaps = 16/428 (3%)
Frame = +3
Query: 177 YSLVNTTNMTSAV------------VEFWERNMHQMTDGLDKP--GQIRWPLAITLAIAW 222
YS +N+T +TS V ++ + + ++ + D G I + +TLA+AW
Sbjct: 3 YSQLNSTIVTSMVFNPCKTTWVSPAADYLSQYVLRLNEATDMANLGGISLKMILTLALAW 182
Query: 223 VLVYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDS 282
+L++FC+ KGV +GKVVYF+AT+PY++L++L RGVTL G +G+ FY+ P + KL+D+
Sbjct: 183 LLIFFCLMKGVKSSGKVVYFTATFPYVILVVLLVRGVTLEGHLDGVKFYVIPEWDKLADA 362
Query: 283 EVWLDAATQIFFXXXXXXXXXXXXXXYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIV 342
+VW DAATQIF+ YN F NN YRD+I+V IN TS+FAGF IFS++
Sbjct: 363 KVWGDAATQIFYSLGVGFGGLLTMASYNKFKNNCYRDAIMVAVINCSTSIFAGFAIFSLL 542
Query: 343 GFMAHVTKRSIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVE 402
G MAHV +++ DVA+SGPGLAF+AYPE +T+LP LW+ LFF M+L LG+DSQF +E
Sbjct: 543 GHMAHVNNQAVEDVASSGPGLAFVAYPEGITKLPAQSLWSFLFFFMILTLGLDSQFAMME 722
Query: 403 GFITALVDEYPRLLRNRRELFIAAVCIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLF 462
I+ + D +PR LR R+ LF C+V +L+G+ T+GG++V L D+YS S +L+F
Sbjct: 723 TVISGISDMFPRTLRKRKVLFTFCACLVGFLLGIPQATKGGMWVLTLMDWYSGS-YNLMF 899
Query: 463 LVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPL 522
+ E + I + YG F ++++ MVG +P I+W W TPI + + + A+Q TP
Sbjct: 900 VALAELICIMYVYGWRNFSNDVEMMVGFKPNIYWLANWLVITPIAIGFIIIIGAIQYTPA 1079
Query: 523 TMGSYVFPKWGQGVGWLMALSSM--VLIPGYMAYMFLTLKGSLKQRLQVMIQPSEDIVRP 580
+ Y F W QG+GW+M + + + G++ + G K +P
Sbjct: 1080SYDGYEFEDWVQGLGWVMVTVPIASIFVVGFVQMARYGVPGCFK-------------AQP 1220
Query: 581 ENGPEQPQ 588
+ GP P+
Sbjct: 1221DWGPANPE 1244
>08953
Length = 2245
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 223/333 (66%)
Frame = +1
Query: 216 ITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYITPN 275
+TLA+AW+L++FC+ KGV +GKVVYF+AT+PY++L++L RGVTL G EGI FY P
Sbjct: 10 LTLALAWILIFFCLMKGVKSSGKVVYFTATFPYVILLVLLVRGVTLSGHLEGIKFYTIPK 189
Query: 276 FRKLSDSEVWLDAATQIFFXXXXXXXXXXXXXXYNSFHNNVYRDSIIVCCINSCTSMFAG 335
+ KL+D++VW DAATQIF+ Y+ F NN +RD+I+V IN TS+FAG
Sbjct: 190 WDKLADAKVWGDAATQIFYSLGVGFGGLLTMSSYSKFKNNCHRDAIMVALINCGTSIFAG 369
Query: 336 FVIFSIVGFMAHVTKRSIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGID 395
F IF+++G MA+VT + + VA SGPGLAF+AYPE +T+LP LWA LFF M+L LG+D
Sbjct: 370 FAIFALLGHMAYVTNQDVDKVADSGPGLAFVAYPEGITKLPAMSLWAFLFFFMILTLGLD 549
Query: 396 SQFCTVEGFITALVDEYPRLLRNRRELFIAAVCIVSYLIGLSNITQGGIYVFKLFDYYSA 455
SQF +E I+ + D +PRLLR + F C+V +L+G+ T+GG++V L D+YS
Sbjct: 550 SQFAMMETVISGISDMFPRLLRKHKTFFTFICCLVGFLLGIPQATKGGMWVLTLMDWYSG 729
Query: 456 SGMSLLFLVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFS 515
S +L+F+ E + + + YG N+FY++I+ M+G +P +W++ W TPI + + +
Sbjct: 730 S-YNLMFVALAEIICLMYVYGFNKFYEDIEMMIGHKPNYYWRIHWLAITPIAIIFIIVIG 906
Query: 516 AVQMTPLTMGSYVFPKWGQGVGWLMALSSMVLI 548
AVQ TP + Y F W QG+GW+M + LI
Sbjct: 907 AVQYTPASYSGYEFEBWVQGLGWVMVSVPIALI 1005
>21405
Length = 542
Score = 152 bits (384), Expect(2) = 2e-55, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 89/125 (71%)
Frame = +2
Query: 418 NRRELFIAAVCIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGV 477
R+E+FIA VC++SYL+GL+ ITQGG+Y+F++ D Y+ SG LL+L+FFECVSISW YGV
Sbjct: 167 KRKEIFIAIVCMLSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGV 346
Query: 478 NRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPKWGQGVG 537
+RFYD I++M+G P +WWK CW F TP I GVF F+ VQ + Y +P W G
Sbjct: 347 DRFYDGIKDMIGYYPTVWWKFCWCFTTPAICLGVFFFNIVQWKSIKYLDYSYPWWAHAFG 526
Query: 538 WLMAL 542
W AL
Sbjct: 527 WFTAL 541
Score = 82.4 bits (202), Expect(2) = 2e-55, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Frame = +1
Query: 366 LAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRRELF 423
L YP AV QLP SP+W+ LFF MLL++G+DSQFCT+EGFITA++DE+P+LLR + F
Sbjct: 10 LVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAVIDEWPQLLRKTQRDF 183
>32211
Length = 836
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 138/197 (70%), Gaps = 2/197 (1%)
Frame = -1
Query: 310 NSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASGPGLAFLAYP 369
H + + CC SI+GFMA +ADVA SGPGLAF+AYP
Sbjct: 590 QQVHPQRIQGQRVFCCDQHVHQFPGRLCHLSILGFMAVRQGLDVADVAESGPGLAFIAYP 411
Query: 370 EAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLR--NRRELFIAAV 427
EAV QLPI+PLW+++FF M+++LG+DSQF VEGFITA+VD YPR+LR +RRE+FIA +
Sbjct: 410 EAVAQLPIAPLWSVMFFVMVILLGLDSQFVGVEGFITAVVDLYPRVLRRGHRREVFIAII 231
Query: 428 CIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDNIQEM 487
C+++Y IGLS +T+GG+YVF+LFDYYSAS + +L + FFEC+++++ YGV+RFYDN++ M
Sbjct: 230 CVIAYFIGLSMVTEGGMYVFQLFDYYSASRI-VLVVAFFECITVAYVYGVDRFYDNLEMM 54
Query: 488 VGSRPCIWWKLCWSFFT 504
G R K+ W T
Sbjct: 53 FGFRMGPLMKVSWMALT 3
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 73/112 (65%)
Frame = -2
Query: 228 CIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLD 287
CIWKG+ +GKV+YF+AT PY+++ +L RGVTL GA G+ +Y+ P + +L D +VW+D
Sbjct: 835 CIWKGIKSSGKVMYFTATTPYVLMFVLLIRGVTLEGASTGLKYYLLPEWSRLKDPQVWVD 656
Query: 288 AATQIFFXXXXXXXXXXXXXXYNSFHNNVYRDSIIVCCINSCTSMFAGFVIF 339
A TQIFF YN F +NV+RDS+ IN+ TS AGFVIF
Sbjct: 655 AGTQIFFSYSISLGTLTALGSYNRFTHNVFRDSVCFAVINTFTSFLAGFVIF 500
>18526
Length = 537
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 125/172 (72%)
Frame = -2
Query: 208 GQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEG 267
G +RW L ITLA++W+ V+ C++KGV GKV++F+A +PY++L++L RGVTLPGA +G
Sbjct: 530 GTVRWQLLITLAVSWLCVFLCLFKGVKVLGKVMHFAAPFPYMVLLVLLIRGVTLPGAIDG 351
Query: 268 ILFYITPNFRKLSDSEVWLDAATQIFFXXXXXXXXXXXXXXYNSFHNNVYRDSIIVCCIN 327
I FYI P + KL + +VW DAA QIF+ YN F+NNVYRD++IV IN
Sbjct: 350 ISFYIIPRWEKLLEFQVWGDAALQIFYSVGMAWGGIITMASYNKFNNNVYRDAMIVPLIN 171
Query: 328 SCTSMFAGFVIFSIVGFMAHVTKRSIADVAASGPGLAFLAYPEAVTQLPISP 379
TS+FAGFVIFSI+GFMAH +++ D+ GPGL F+AYPEAV++LPISP
Sbjct: 170 CGTSIFAGFVIFSILGFMAHEAGKNVEDIVTQGPGLTFVAYPEAVSKLPISP 15
>14556
Length = 552
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 96/142 (67%), Gaps = 3/142 (2%)
Frame = -2
Query: 35 QKKAGDLPDRDTWKGRFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAG 94
K + +R W + DFL+SCVGYA+GLGNVWRFPYL +NGG FL PY + LI AG
Sbjct: 446 SKMGSEDIERGNWGSQLDFLLSCVGYAVGLGNVWRFPYLAYRNGGATFLFPYIIMLIIAG 267
Query: 95 VPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNS 154
+PLF LE +LGQ+ S G + VWK++P F G+G A ++S ++IYY VII++AIYY++ S
Sbjct: 266 LPLFFLELALGQFASEGPITVWKMSPFFSGIGFAMCIISGVVSIYYNVIITYAIYYMFVS 87
Query: 155 FT---TTLPWKQCDNPWNTDRC 173
F LPW C++ W T C
Sbjct: 86 FVNLDNDLPWASCNHTWATPSC 21
>26872
Length = 406
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 98/134 (73%)
Frame = +2
Query: 363 LAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRREL 422
L F+AYPEA++ LP + WA++FF MLL LG+DS F E ITAL DE+P +LR REL
Sbjct: 2 LVFVAYPEAISTLPGASFWAVIFFLMLLTLGLDSSFGGSEAIITALSDEFP-VLRRHREL 178
Query: 423 FIAAVCIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYD 482
F+ A+ ++ +++GL++ +GG+YV L D + A+G S+LF VFFE +++SW YG++RF +
Sbjct: 179 FVLALFVLYFIVGLASCAEGGLYVVNLLDQF-AAGYSILFAVFFETLAVSWAYGLDRFSE 355
Query: 483 NIQEMVGSRPCIWW 496
+++ M+G RP +W
Sbjct: 356 DLEAMLGHRPGPYW 397
>02570
Length = 1067
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 129/238 (54%), Gaps = 10/238 (4%)
Frame = -3
Query: 365 FLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRRELFI 424
F+AYPEA++ LP LW++LFF ML LG+DS+F +E +T + DE PR R + +
Sbjct: 1065 FVAYPEALSNLPPPQLWSVLFFFMLFTLGLDSEFGLMETILTCIQDEMPR-XRKYKSVMC 889
Query: 425 AAVCIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDNI 484
I Y + L + GG YV L D+Y A S+L L FE +S+ W YGV RF ++
Sbjct: 888 IGFGIGCYFLALPCVCNGGDYVVTLMDHYGAD-FSVLILSCFEVMSVMWXYGVMRFQKDL 712
Query: 485 QEMVGSRPCIW--WKLCWSFFTPIIVAGVFLFSAVQMTPLTMGS---YVFPKWGQGVGWL 539
+ M+G RP W W CWS PI++A +FL+ V+ P S + +P++ Q +GW
Sbjct: 711 EYMLGRRPMGWPYWVFCWS-IAPILIAALFLYRMVEYVPPHYDSEKLHPYPQFAQNIGWF 535
Query: 540 MALSSMVLIPGYMAYMFLTL-----KGSLKQRLQVMIQPSEDIVRPENGPEQPQAGSS 592
+ + + IP + Y + + + + +M +P+++ RP +G ++ G S
Sbjct: 534 LLVVVLCPIPLWFIYHAVRTYRQNSDQPISEIIAIMFRPTKEW-RPADGSDRYLVGDS 364
>19604
Length = 419
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 89/133 (66%)
Frame = -3
Query: 208 GQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEG 267
G RW LA+ L ++WV+V C+ KG+ +GKVVYF+AT+PY++LIIL RG L GAKEG
Sbjct: 399 GTPRWRLALCLLLSWVVVILCLIKGIKSSGKVVYFTATFPYVILIILLIRGALLEGAKEG 220
Query: 268 ILFYITPNFRKLSDSEVWLDAATQIFFXXXXXXXXXXXXXXYNSFHNNVYRDSIIVCCIN 327
+ F+I P + KL+D +VW+ AA Q+FF YN F NNVY D++++ ++
Sbjct: 219 VEFFIIPEWDKLTDVKVWVAAAGQMFFSLSVSFGGIIMFGSYNKFTNNVYGDALLISVMD 40
Query: 328 SCTSMFAGFVIFS 340
TS+ AGFV+F+
Sbjct: 39 LVTSVIAGFVVFT 1
>26038
Length = 426
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Frame = -2
Query: 381 WAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNR--RELFIAAVCIVSYLIGLSN 438
WAI+FF MLL LGIDS F +E +T L DE ++R R RE+ V ++ L
Sbjct: 416 WAIIFFFMLLTLGIDSAFGGLESPLTGLHDELKTVMRMRYSREVLTLVVVGSAFFCSLPC 237
Query: 439 ITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKL 498
+T+GGIYVF + D ++A G S+LF V + +++SWFYG+N+F ++++M GS+P ++W++
Sbjct: 236 LTEGGIYVFTILDTFAA-GTSILFTVLCQVIAVSWFYGINQFCRDVEKMTGSQPSMYWRV 60
Query: 499 CWSFFTPIIV 508
CW F PI++
Sbjct: 59 CWKFVCPILL 30
>33291
Length = 467
Score = 75.1 bits (183), Expect(2) = 9e-20, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = -1
Query: 313 HNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASGPGLAFLAYPEAV 372
NN RDSIIV IN TS +AGF IFSI+GFMA + DV G GL F+AYPEA+
Sbjct: 332 QNNAIRDSIIVPIINCLTSFYAGFAIFSILGFMAASKGVEVEDVTTDGTGLVFVAYPEAL 153
Query: 373 TQLP 376
++P
Sbjct: 152 ARMP 141
Score = 40.0 bits (92), Expect(2) = 9e-20, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -2
Query: 268 ILFYITPNFRKLSDSEVWLDAATQIFFXXXXXXXXXXXXXXYNSFHNN 315
I FY+ P+ KLS+S VWL AA QIFF Y F
Sbjct: 466 IKFYLQPDASKLSESSVWLAAAAQIFFSLSTSTGSLTAMSSYTKFKTT 323
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = -3
Query: 360 GPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNR 419
GPG+ L P Q + LW++LFF M++ LG+ +Q + E +TAL DEY L N
Sbjct: 186 GPGVCGL--P*GAGQDALPQLWSVLFFFMMICLGMGTQIPSAETLLTALQDEYKCLRGNG 13
Query: 420 RELF 423
F
Sbjct: 12 APSF 1
>25926
Length = 675
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Frame = +1
Query: 475 YGVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMG----SYVFP 530
YGVNRFYDN++ M G R W K+CW+ TP+ +F+ + + LT +Y +P
Sbjct: 7 YGVNRFYDNLEMMFGFRVGPWMKICWTVLTPLYTMVIFIMGCISYSDLTYKRKTVTYEYP 186
Query: 531 KWGQGVGWLMALSSMVLIPGYMAYMFLTLKGSLKQRLQVMIQPS 574
W GVGW M S++ IP M + LT GS +R++ + +P
Sbjct: 187 SWAIGVGWSMVAMSIIFIPLVMVFRMLTADGSFVERVKHLTKPR 318
>21870
Length = 347
Score = 78.2 bits (191), Expect = 9e-15, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Frame = -2
Query: 44 RDTWKGRFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFL 99
R TW +F+++C+G+A+GLGNVWRFPYLC +NGGGAFLIPY ++L F P L
Sbjct: 199 RATWGRHLEFIVTCIGFAVGLGNVWRFPYLCYRNGGGAFLIPYLISLGFHWHPSLL 32
>14638
Length = 421
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Frame = -3
Query: 419 RRELFIAAVCIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVN 478
R +F ++C + +++GL TQGG Y+ L D + G LL + FFE V+I W YG
Sbjct: 407 RSIIFRVSMCALGFILGLPQTTQGGTYILDLLDIFV--GFPLLLVGFFEFVAIVWVYGFR 234
Query: 479 RFYDNIQEMVGSRPC------IWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPKW 532
R +++ M+G P ++ W +P ++ + +F +V P+T Y P W
Sbjct: 233 RISEDVMMMMGDHPITRMVYDFYFSWTWLVVSPGLLLAIIVFDSVNYVPITGPGY--PPW 60
Query: 533 GQGVGWLMALSSMVLIP 549
+ +GWL+ M+ IP
Sbjct: 59 AETLGWLVVTFIMMWIP 9
>31151
Length = 322
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = -2
Query: 472 SWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPK 531
W YGV R ++I M+G P + W F TP ++ V +F+ + TP + G YV+
Sbjct: 321 GWIYGVARIREDICLMLGHGPPFILTVFWKFITPALLLVVLVFTLMNYTPPSYGQYVYGT 142
Query: 532 WGQGVGWLMALSSMVLIP 549
G GW++ALSS++ P
Sbjct: 141 GGHVFGWVVALSSLLPSP 88
>00472
Length = 2194
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +2
Query: 179 LVNTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGK 238
L TT++++ R+M+ T K GQI + L + L + + C W G
Sbjct: 341 LSRTTSISAHSASLHNRSMYDSTGSFLKSGQIHYMLCVHLXMILKSXFNCSWDYGG---- 508
Query: 239 VVYFSATYPYIMLIILFFRG 258
F + Y ++L L F G
Sbjct: 509 ---FFSIYXKVLLAFLTFIG 559
>11578
Length = 559
Score = 28.5 bits (62), Expect = 8.8, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = -2
Query: 161 WKQCDNPW---NTDRCFSNYSLVNTTNMTSAVVEFWERNMHQ 199
W QCD PW + DRC S + + + + + N HQ
Sbjct: 510 WVQCDTPWQDGSADRCSSGVGICMSAQLRTLFSICTQFNKHQ 385
>10280
Length = 2352
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 177 YSLVNTTNMTSAVVEFWERNMHQMTDG-LDKPGQIRWPLAITLAIAWVLVYFC 228
+S+ N+ S V W R + DG +P Q + L++ L +WV +Y+C
Sbjct: 647 WSVANSFKDLSIVPWKWARERGRPVDGSARRPCQRYFALSLFLVESWVFIYWC 489
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|51491852|ref|NP_001003913.1| methionine-tRNA
synthetase [Mus musculus]
(902 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14979 505 e-143
04150 293 3e-79
00661 29 6.7
>14979
Length = 1133
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 228/328 (69%), Positives = 269/328 (82%)
Frame = -1
Query: 238 AVAAWEKGLESLPPLKLQQHPVLPVPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFA 297
AV AW + P ++HPVLP +RN+LITSALPYVNNVPHLGNIIGCVLSADVF+
Sbjct: 986 AVKAWNTSNKDFPVPSPRKHPVLPKKNKRNILITSALPYVNNVPHLGNIIGCVLSADVFS 807
Query: 298 RYCRLRQWNTLYLCGTDEYGTATETKAMEEGLTPREICDKYHAIHADIYRWFGISFDTFG 357
R+CRLR +N LY+CGTDEYGTATETKA+EEG+TP++ICDKY+ +H +IY+WF I FD FG
Sbjct: 806 RFCRLRNYNVLYVCGTDEYGTATETKALEEGVTPQQICDKYNKLHTEIYQWFNIDFDYFG 627
Query: 358 RTTTPQQTKITQDIFQRLLTRGFVLRDTVEQLRCERCARFLADRFVEGVCPFCGYEEARG 417
RTTTPQQT+I QDIF RL RGF+L+D++EQL C C +FLADRFVEGVCP CG+E+ARG
Sbjct: 626 RTTTPQQTEIAQDIFWRLHERGFILKDSMEQLHCGSCDKFLADRFVEGVCPLCGFEDARG 447
Query: 418 DQCDRCGKLINAIELKKPQCKICRSCPVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWT 477
DQCD CGKLINA ELK P+CKICR P R SQHLFLDLPKLE L+ L K WT
Sbjct: 446 DQCDGCGKLINATELKDPKCKICRKAPSPRISQHLFLDLPKLEGDLKSHLDKAFGEGTWT 267
Query: 478 PNARFIIRSWLRDGLKPRCITRDLKWGTPVPLEGFEDKVFYVWFDATIGYVSITANYTDQ 537
N+R I SW+RDGLKPRCI+RDLKWGTPVPLEG++DKVFYVWFDA IGY+SITANYTBQ
Sbjct: 266 TNSRTITNSWIRDGLKPRCISRDLKWGTPVPLEGYKDKVFYVWFDAPIGYISITANYTBQ 87
Query: 538 WEKWWKNPEQVDLYQFMAKDNVPFHGLV 565
W++WW NP+QV++Y F+ KDNVPFH ++
Sbjct: 86 WKQWWNNPKQVEMYNFLGKDNVPFHSVI 3
>04150
Length = 1425
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 198/294 (67%), Gaps = 20/294 (6%)
Frame = -1
Query: 602 IGVFGDMAKDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGM 661
+GVFGD AKDTGIPADI+RFYLLY+RPE QD++FSW DLL+KNNSELLNNLGNFINRA M
Sbjct: 1425 VGVFGDQAKDTGIPADIYRFYLLYVRPESQDTSFSWDDLLLKNNSELLNNLGNFINRALM 1246
Query: 662 FVSKFFGGCVPEMALTPDDRRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYI 721
F+S FGG V EM L DD++L+A V+ EL+ Y +E R+RD++R+ILTISR GNQ++
Sbjct: 1245 FLSNNFGGVVQEMNLQDDDKQLLALVTRELRSYVDNMEHGRLRDSIRNILTISRLGNQFM 1066
Query: 722 QVNEPWKRIKGGEMDRQRAGTVTGMAVNMAALLSVMLQPYMPTVSSTIQTQLQLPPAACR 781
Q N+PW +KG D++RAG V ++ N++ LLSV+LQPYMP VS+TIQ QL PA
Sbjct: 1065 QANKPWVLVKGTAEDKKRAGVVVSVSANVSCLLSVLLQPYMPAVSATIQEQLN-APADVN 889
Query: 782 ILATSFICTLPAGHRIGTVSPLFQKLENDQIENLRQRFGGGQAKGSPKPA---------- 831
++ +FIC L GH+IG SPLFQK+E I +L+ +F G A PKPA
Sbjct: 888 VVTETFICRLWPGHKIGKPSPLFQKIEASTIADLKAKFAGKPA--PPKPADKAKGAAASG 715
Query: 832 ----------AVEAVTAAGSQHIQTLTDEVTKQGNVVRELKAQKADKNQVAAEV 875
A + LT+EVT QGN VRE+KA KADK + A+V
Sbjct: 714 AGNKGSGESSANGPXGVVNEAEVARLTEEVTAQGNKVREVKAAKADKATIDAQV 553
>00661
Length = 2118
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 419 QCDRCGKLINAIELKKPQCKICRSCPVVRSSQHLFLDLPKLE 460
+C CG+ N + K PQ + C +S QHL P+ +
Sbjct: 279 RCYNCGEFSNHLAAKCPQGPAPKRCHHCKSEQHLIAQCPQRQ 404
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|125628629|ref|NP_061219.2| eukaryotic translation
initiation factor 3, subunit 7 (zeta) [Mus musculus]
(548 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01771 501 e-142
26500 167 1e-41
>01771
Length = 1615
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/377 (62%), Positives = 291/377 (77%), Gaps = 5/377 (1%)
Frame = +3
Query: 156 KPRDSSVEVRSDWEVKEEMDFPQLMKMRYLEVSEPQDIECCGALEYYDKAFDRITTRSEK 215
K RD+SV+++ DW V EEMDFP+L K+ + E D+ CG +E YDK +DR+TT++EK
Sbjct: 9 KHRDASVQIKDDWPVVEEMDFPRLTKLNLPDAKEAVDLMRCGGMEIYDKTYDRVTTKNEK 188
Query: 216 PLRSIKRIFHTVTTTDDPVIRKLAKTQGNVFATDAILATLMSCTRSVYSWDIVVQRVGSK 275
PL+ I RIFH VTTTDDP+IR+LAKTQGNVFATDAILAT+M CTRS YSWDIV+QRVG+K
Sbjct: 189 PLKRINRIFHKVTTTDDPIIRQLAKTQGNVFATDAILATIMCCTRSSYSWDIVIQRVGNK 368
Query: 276 LFFDKRDNSDFDLLTVSETANEPPQDEGNSFNSPRNLAMEATYINHNFSQQCLRMGRERY 335
LFFDKRD+SDFDLLTVSETA EPPQDEGNS NSPRNLA+EAT+INHNFSQQ L+ G ++Y
Sbjct: 369 LFFDKRDDSDFDLLTVSETATEPPQDEGNSINSPRNLALEATFINHNFSQQVLKPGEDKY 548
Query: 336 NFPNPNPFVEDDMDKNEIASVAYRYRRWKLGDDIDLIVRCEHDGVMTGANGEVSFINIKT 395
F N NPFV+ + ++ ++ASV YRYR+W LG+DI LI RCEHD VM N E FI IK+
Sbjct: 549 KFENKNPFVQTE-EETDVASVGYRYRKWDLGNDIVLIARCEHDAVMYAXNNEAQFIXIKS 725
Query: 396 LNEWDSRHCNGVDWRQKLDSQRGAVIA--TELKNNSYKLARWTCCA---LLAGSEYLKLG 450
LNEWDSRH GV WR +LDSQR AV+A T + +S KLA+WT C L ++ +
Sbjct: 726 LNEWDSRHSGGVXWRSRLDSQRXAVLATVTRAEKHSCKLAKWTVCHSCRLRPNQVWICIA 905
Query: 451 YVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILK 510
H +H ILGT QFKP EFA+QINL+++NAWGILRC++D CMKL+EGKYLI+K
Sbjct: 906 SACEGH----DKHXILGTXQFKPTEFAAQINLNMDNAWGILRCIVDTCMKLKEGKYLIMK 1073
Query: 511 DPNKQVIRVYSLPDGTF 527
DPNK V+ +Y +PD TF
Sbjct: 1074DPNKPVVXIYDIPDHTF 1124
>26500
Length = 435
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
Frame = -3
Query: 1 MAKFMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYS 60
MA+F P IQDNP GWGPC +PE ++D+PYQPFSK RLGKV+DWTGATYQDKRY KY+
Sbjct: 415 MARFDPPQIQDNPEGWGPCVMPEMYKDLPYQPFSKDVRLGKVSDWTGATYQDKRYLGKYN 236
Query: 61 SQFGGGSQYAYFHEEDETSFQLVDTARTQKTAYQRNRMRFAQ-RNLRRDKDRRNMVQFNL 119
S F GGSQYAY+HEEDE+SFQLVDTA+ Q+ YQR R F Q + R + R+ Q N+
Sbjct: 235 SAF-GGSQYAYYHEEDESSFQLVDTAKVQRPIYQRGRRMFQQTKQRRERERRQQQAQANM 59
Query: 120 QTLPKSAKQKERERIRLQK 138
Q L K+ K +ER+R R+ K
Sbjct: 58 QVLTKTQKNRERDRQRMLK 2
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|33468931|ref|NP_035449.1| seryl-aminoacyl-tRNA
synthetase [Mus musculus]
(536 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08633 496 e-141
11977 151 5e-37
33502 30 1.9
37355 28 7.4
>08633
Length = 1845
Score = 496 bits (1278), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/334 (71%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Frame = +3
Query: 171 VDLVVMVDGFEGEKGAVVAGSRGYFLKGPLVFLEQALIQYALRTLGSRGYTPIYTPFFMR 230
VDLVVMVDG + ++GAV AG RGY+LKGPLVFLEQALI +++ L +GY P+YTPFFMR
Sbjct: 18 VDLVVMVDGVDMDRGAVAAGGRGYYLKGPLVFLEQALINHSMMMLYGKGYQPLYTPFFMR 197
Query: 231 KEVMQEVAQLSQFDEELYKVIGKGSEKSDD-NSYDEKYLIATSEQPIAALHRDEWLRPED 289
KEVMQEVAQLSQFDEELYKVIGKGSEK ++ + DEKYLIATSEQPIAA HRDEW+ E
Sbjct: 198 KEVMQEVAQLSQFDEELYKVIGKGSEKKEEGDVVDEKYLIATSEQPIAAFHRDEWIATES 377
Query: 290 LPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAE 349
LPI+Y G STCFRQEVGSHGRDTRGIFRVHQFEK+EQF ++P DNKSWEMFDEMI AE
Sbjct: 378 LPIRYLGYSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITAPTDNKSWEMFDEMIGNAE 557
Query: 350 EFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIR 409
F +SLGIPY +VNIVSG LN+AA+KKLDLEAWFPGS +FRELVSCSNCTDYQARRLRIR
Sbjct: 558 AFNKSLGIPYRVVNIVSGELNNAAAKKLDLEAWFPGSASFRELVSCSNCTDYQARRLRIR 737
Query: 410 YGQTKKMMDKKKNNLRFSTQNKLKAMSSLFSPKKVEFVHMLNATMCATTRTICAILENYQ 469
YGQTKKM ++V +VHMLNATMCATTR ICAILEN Q
Sbjct: 738 YGQTKKM------------------------GQEVPYVHMLNATMCATTRVICAILENNQ 845
Query: 470 AEKGIAVPEKLREFMPPGLQELIPFVKPAPIDQE 503
E G+ VPE LR FMP GL E IPFVKPAPID++
Sbjct: 846 TEDGVIVPEVLRRFMPEGLNEKIPFVKPAPIDEQ 947
>11977
Length = 488
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 103/141 (73%), Gaps = 1/141 (0%)
Frame = +1
Query: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
MVLD++LFR DKGGDP+ ++E Q KRFKD LVD++V+ D+ WR+ RFRAD LNKLKN+C
Sbjct: 61 MVLDIELFRADKGGDPSKVKENQAKRFKDVTLVDKVVEKDTAWRKLRFRADLLNKLKNVC 240
Query: 61 SKTIGEKMKKKEAVGDDESVPENV-LNFXXXXXXXXXXXKVSQIKKVRLLIDEAIQKCDG 119
S IG+KMKKKE VG+DE++P+++ N V+QIK++RLLID+ ++
Sbjct: 241 SNEIGDKMKKKEPVGEDETIPDDIRTNIDDLNQEKLKALTVTQIKQIRLLIDQQMKDNSQ 420
Query: 120 ERVKLEAERFENLREIGNLLH 140
++ EA R ++LREIGN+LH
Sbjct: 421 ALLETEAARNQSLREIGNMLH 483
>33502
Length = 1173
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 336 KSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLNHAA 373
K E++D + + + F+Q++ P+H++ ++ L+H A
Sbjct: 129 KLLELYDRLFKSRDPFWQTVRKPHHLLTVLHALLSHLA 16
>37355
Length = 676
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 26 RFKDPG-LVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62
++KD L+++ V+ + RCR R +LN LKN+ SK
Sbjct: 401 KYKDNNILMEKYVQQFKTYHRCRRRKTSLNLLKNMLSK 514
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|19527246|ref|NP_598789.1| tubulin, gamma 2 [Mus
musculus]
(451 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05902 493 e-140
16482 170 9e-43
00276 142 3e-34
12457 125 2e-29
04882 112 4e-25
13181 111 5e-25
06360 90 2e-18
39157 86 2e-17
03702 85 6e-17
25015 75 5e-14
28905 58 7e-09
30297 29 3.3
01993 29 4.1
33626 28 7.5
>05902
Length = 1127
Score = 493 bits (1270), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/296 (82%), Positives = 268/296 (90%)
Frame = +2
Query: 155 ERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIA 214
E+LNDR+PKKL+QTYSVFPN DE+SDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIA
Sbjct: 71 EKLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIA 250
Query: 215 TDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYT 274
DRLHI P+F+Q+NQLVST+MS STTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYT
Sbjct: 251 ADRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYT 430
Query: 275 PLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVH 334
PLTTD VA+VRKTTVLDVMRRLLQPKN+MVST RQ NHCYI+ILNIIQGEVDPTQVH
Sbjct: 431 PLTTDSQVANVRKTTVLDVMRRLLQPKNMMVSTPVHRQANHCYISILNIIQGEVDPTQVH 610
Query: 335 KSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQ 394
KSLQRIRERKLA FIPWGPASIQVALSRKSPY+ +AHRVSGLM+ANHTSIS LFE +Q
Sbjct: 611 KSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSISHLFERILRQ 790
Query: 395 YDKLWKRGAFLEQFRKEDIFKDNFEEMHRSREVVQELIDEYHAATRPDYISWGTQE 450
YDKL KR AF++QF+KE IFKDN +E SRE +Q L+DEY AATR DY+SWGTQ+
Sbjct: 791 YDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQAATRRDYLSWGTQQ 958
>16482
Length = 837
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 139/247 (56%)
Frame = +1
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ +Q GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+P
Sbjct: 103 REIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 282
Query: 63 RAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHXXXXXXXXXXXFSQGEKIHEDIFDII 122
RAVL+DLEP + S+ + + +++ P+N + +++G ++ + + D++
Sbjct: 283 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ-SGAGNNWAKGHYTEGAELVDSVLDVV 459
Query: 123 DREADGSDSLEGFVLCHXXXXXXXXXXXXXXXERLNDRYPKKLVQTYSVFPNQDEMSDVV 182
+EA+ D L+GF L H ++ + YP +++ T+SV P+ ++SD V
Sbjct: 460 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP-KVSDTV 636
Query: 183 VQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTT 242
V+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 637 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 816
Query: 243 LRYPGYM 249
LR+PG +
Sbjct: 817 LRFPGQL 837
>00276
Length = 1330
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 170/333 (51%), Gaps = 5/333 (1%)
Frame = -3
Query: 108 FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHXXXXXXXXXXXXXXXERLNDRYPKKLVQ 167
++ G+++ + + D I + AD L+GF++ H ERL+ Y KK
Sbjct: 1247 YTIGKELVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLXMERLSVDYGKKSKL 1068
Query: 168 TYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQ 227
+ ++P ++S VV+PYNS+LT +++DC ++DN A+ I L I+ P+++
Sbjct: 1067 EFXIYP-APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 891
Query: 228 INQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRK 287
+N+L+ I+S+ T +LR+ G +N DL +L+P PR+HF + Y P+ + + A +
Sbjct: 890 LNRLIXQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK-AYHEQ 714
Query: 288 TTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLAN 347
V ++ +P N +V Y+A + +G+V P V+ ++ I+ ++
Sbjct: 713 LXVAEITNACFEPANQLVKCDPRHGK---YMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 543
Query: 348 FIPWGPASIQVALSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQYDKLWKRG 402
F+ W P +V ++ + P + ++ + M++N T+I+ + ++D ++ +
Sbjct: 542 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 363
Query: 403 AFLEQFRKEDIFKDNFEEMHRSREVVQELIDEY 435
AF+ + E + + F E +RE + L +Y
Sbjct: 362 AFVHWYVGEGMEEGEFSE---AREDLAALEKDY 273
>12457
Length = 781
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 129/240 (53%)
Frame = -1
Query: 66 LLDLEPRVIHSILNSSYAKLYNPENIYLSEHXXXXXXXXXXXFSQGEKIHEDIFDIIDRE 125
L+DLEP V+ + +Y +L++PE + ++ ++ G++I + + D I +
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQL-VTGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 542
Query: 126 ADGSDSLEGFVLCHXXXXXXXXXXXXXXXERLNDRYPKKLVQTYSVFPNQDEMSDVVVQP 185
AD L+GF++ H ERL+ Y KK ++++P ++S VV+P
Sbjct: 541 ADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEP 365
Query: 186 YNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRY 245
YNS+LT +++DC ++DN A+ I L I+ P+++ +N+L+ I+S+ T +LR+
Sbjct: 364 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 185
Query: 246 PGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMV 305
G +N DL +L+P PR+HF + Y P+ + + A + TV ++ +P N MV
Sbjct: 184 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK-AYHEQLTVAEITNACFEPANQMV 8
>04882
Length = 1136
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
Frame = +2
Query: 220 IQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTD 279
+ P++ +N LVS MS TT LR+PG +N DL L +++P PRLHF M G+ PLT+
Sbjct: 314 VHTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 493
Query: 280 QSVASVRKTTVLDVMRRLLQPKNVMVST----GRDRQTNHCYIAILNIIQGEVDPTQVHK 335
S R TV ++ +++ KN+M + GR Y+ + I +G + +V +
Sbjct: 494 GS-QQYRALTVPELTQQMFDSKNMMAACDPRHGR-------YLTVAAIFRGRMSMKEVDE 649
Query: 336 SLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQY 395
+ ++ + + F+ W P +++ A+ P ++S + N T+I LF+ +Q+
Sbjct: 650 QMLNVQNKNSSYFVEWIPNNVKTAVCDIP---PRGLKMSATFIGNSTAIQELFKRISEQF 820
Query: 396 DKLWKRGAFLEQFRKEDIFKDNFEEMHRSREVVQELIDEYH 436
+++R AFL + E + + F E + + +L+ EY
Sbjct: 821 TAMFRRKAFLHWYTGEGMDEMEFTEAESN---MNDLVSEYQ 934
>13181
Length = 1092
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%), Gaps = 4/223 (1%)
Frame = -3
Query: 218 LHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLT 277
L + P++ +N LVS MS TT LR+PG +N DL L +++P PRLHF M G+ PLT
Sbjct: 1069 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 890
Query: 278 TDQSVASVRKTTVLDVMRRLLQPKNVMVST----GRDRQTNHCYIAILNIIQGEVDPTQV 333
+ S R TV ++ +++ KN+M + GR Y+ + + +G + +V
Sbjct: 889 SRGS-QQYRALTVPELTQQMFDAKNMMAACDPRHGR-------YLTVAAMFRGRMSMKEV 734
Query: 334 HKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQ 393
+ + ++ + + F+ W P +++ A+ P ++S + N T+I LF+ +
Sbjct: 733 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP---PRGLKMSATFVGNSTAIQELFKRISE 563
Query: 394 QYDKLWKRGAFLEQFRKEDIFKDNFEEMHRSREVVQELIDEYH 436
Q+ +++R AFL + E + + F E + + +L+ EY
Sbjct: 562 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESN---MNDLVSEYQ 443
>06360
Length = 1896
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Frame = -1
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHY 60
RE I++ +GQ G Q+G W+ C EHGI P+G + T G D + FF + +
Sbjct: 1707 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 1528
Query: 61 IPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHXXXXXXXXXXXFSQGEKIHEDIFD 120
+PRAV +DLEP V+ + +Y +L++PE + ++ ++ G++I + + D
Sbjct: 1527 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL-VTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 121 IIDREADGSDSLEGFVLCHXXXXXXXXXXXXXXXERLNDRYPKKLVQTYSVFP 173
I + AD L+GF++ H ERL+ Y KK ++++P
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYP 1192
>39157
Length = 488
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Frame = -1
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ LQ GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+P
Sbjct: 440 REIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 261
Query: 63 RAVLLDLEPRVIHSILNSS--YAKLYNPENIYLSEHXXXXXXXXXXXFSQGEKIHEDIFD 120
RAVL+DLEP + S+ + S K++ P+N + +G ++ + + D
Sbjct: 260 RAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDSVLD 81
Query: 121 IIDREA 126
++ +
Sbjct: 80 VVRKRG 63
>03702
Length = 1932
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 83/151 (54%)
Frame = +1
Query: 155 ERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIA 214
ERL+ Y KK ++++P ++S VV+PYNS+LT +++DC ++DN A+ I
Sbjct: 1459 ERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 1635
Query: 215 TDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYT 274
L I+ P ++ +N+L+ I+S+ T +LR+ G +N DL +L+PTP H L G+
Sbjct: 1636 RRNLDIERPXYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHL 1809
Query: 275 PLTTDQSVASVRKTTVLDVMRRLLQPKNVMV 305
A + TV +V +P N +V
Sbjct: 1810 CPVISAEKAYHEQLTVAEVTNACFEPANQLV 1902
>25015
Length = 458
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 65/119 (54%)
Frame = -3
Query: 21 FWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNS 80
FW+ + EHGI P G + +R +V++ +A Y+PRAVL+DLEP + S+ +
Sbjct: 363 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 184
Query: 81 SYAKLYNPENIYLSEHXXXXXXXXXXXFSQGEKIHEDIFDIIDREADGSDSLEGFVLCH 139
+ +++ P+N + +++G ++ + + D++ +EA+ D L+GF L H
Sbjct: 183 PFGQIFRPDNFVFGQ-SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 10
>28905
Length = 425
Score = 58.2 bits (139), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Frame = -1
Query: 254 IGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST----GR 309
+ + +++P PRLHF M G+ PLT+ S R TV ++ +++ KN+M + GR
Sbjct: 395 VNVAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDAKNMMAACDPRHGR 219
Query: 310 DRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPS 369
Y+ + + +G + +V + + ++ + + F+ W P +++ A+ P
Sbjct: 218 -------YLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP---PR 69
Query: 370 AHRVSGLMMANHTSI 384
++SG + N T+I
Sbjct: 68 GLKMSGTFIGNSTAI 24
>30297
Length = 822
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 334 HKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPS 369
H L+R+ R +PWGP+ ++ L+R P P+
Sbjct: 452 HPHLERLPGRPPHGTVPWGPSHLEEWLARWPPTRPT 345
>01993
Length = 1915
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 295 RRLLQPKNVMVSTGRDRQTNHCYIAILN 322
R +L P +M T R++ TNH +ILN
Sbjct: 341 RHILSPNTIMTKTHRNKVTNHVL*SILN 258
>33626
Length = 391
Score = 28.1 bits (61), Expect = 7.5, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3
Query: 230 QLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVAS 284
++VS +A+ +L + ++NN I +I L+ T R ++GY P TD ++S
Sbjct: 200 RVVSPFAAAARFSLLWFFFLNNLCILIIVFLVATDRNLNNISGYLPHLTDHFLSS 36
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|42415475|ref|NP_035162.1| prolyl 4-hydroxylase, beta
polypeptide [Mus musculus]
(509 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03582 432 e-140
35861 212 2e-88
06936 233 1e-61
28335 102 3e-22
36159 66 3e-11
18943 61 7e-11
21509 54 2e-09
18455 60 3e-09
14392 55 8e-08
04779 53 2e-07
04510 50 2e-06
30644 47 1e-05
15159 40 0.002
07257 37 0.021
38795 37 0.022
01000 35 0.088
>03582
Length = 1967
Score = 432 bits (1110), Expect(2) = e-140, Method: Compositional matrix adjust.
Identities = 209/345 (60%), Positives = 260/345 (75%)
Frame = +3
Query: 132 KKRTGPAATTLSDTAAAESLVDSSEVTVIGFFKDVESDSAKQFLLAAEAIDDIPFGITSN 191
+++TGP A L D A++ + EV VIGFFKD +S+ A F AA IDDIPFGITS+
Sbjct: 420 EEKTGPPAEDLKDKDEAKAFAEKDEVVVIGFFKDQKSEGAVAFTEAAAGIDDIPFGITSD 599
Query: 192 SGVFSKYQLDKDGVVLFKKFDEGRNNFEGEITKEKLLDFIKHNQLPLVIEFTEQTAPKIF 251
F +Y++DKDG+VL KKFDEGRN+FEG+ ++ ++ NQLPLV+EFT+++A KIF
Sbjct: 600 ESAFKEYKMDKDGIVLLKKFDEGRNDFEGDFEPAAIIKHVRDNQLPLVVEFTQESAQKIF 779
Query: 252 GGEIKTHILLFLPKSVSDYDGKLSSFKRAAEGFKGKILFIFIDSDHTDNQRILEFFGLKK 311
GGE+K HILLFL K + + FK AA FKGK+LFI++D+D +N RI EFFGLK
Sbjct: 780 GGEVKNHILLFLKKDGGE--DTIEKFKAAAGDFKGKVLFIYLDTDDAENGRITEFFGLKD 953
Query: 312 EECPAVRLITLEEEMTKYKPESDELTAEKITEFCHRFLEGKIKPHLMSQEVPEDWDKQPV 371
EE PAVRLI L E+MTKYKPES +L E I +F FL+GK+ HLMS++VP DWD +PV
Sbjct: 954 EEIPAVRLIQLAEDMTKYKPESADLDTETIKKFVQDFLDGKLNAHLMSEDVPSDWDAKPV 1133
Query: 372 KVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTA 431
KVLVG NF+EVA D+ K VFVEFYAPWCGHCKQLAPIWD+L + + D +++IAKMDSTA
Sbjct: 1134KVLVGKNFKEVALDKTKGVFVEFYAPWCGHCKQLAPIWDELADKFTDKADVVIAKMDSTA 1313
Query: 432 NEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGG 476
NE+E VKV SFPTLK+FP +D VIDYNGERTLD F KF+ESGG
Sbjct: 1314NEIEEVKVQSFPTLKYFPKDSDE-VIDYNGERTLDAFVKFVESGG 1445
Score = 85.9 bits (211), Expect(2) = e-140, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%)
Frame = +2
Query: 17 VGADALEEEDNVLVLKKSNFEEALAAHKYLLVEFYAPWCGHCXXXXXXXXXXXXXXXXXG 76
V AD +++++ V VL NF+ + ++++LVEFYAPWCGHC
Sbjct: 86 VFADDVKQDEGVYVLTTKNFDSFVKENEFVLVEFYAPWCGHCKALAPEYAKAAQTLKDEN 265
Query: 77 SEIRLAKVDATEESDLAQQYGVRGYPTIKF 106
S+++LAKVDAT E+ L + GVRGYPT+KF
Sbjct: 266 SDVKLAKVDATIETSLGENMGVRGYPTLKF 355
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +2
Query: 371 VKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKD-HENIIIAKMDS 429
V VL NF+ E + V VEFYAPWCGHCK LAP + K +T KD + ++ +AK+D+
Sbjct: 119 VYVLTTKNFDSFV-KENEFVLVEFYAPWCGHCKALAPEYAKAAQTLKDENSDVKLAKVDA 295
Query: 430 TANEV--EAVKVHSFPTLKF 447
T E + V +PTLKF
Sbjct: 296 TIETSLGENMGVRGYPTLKF 355
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +3
Query: 28 VLVLKKSNFEE-ALAAHKYLLVEFYAPWCGHCXXXXXXXXXXXXXXXXXGSEIRLAKVDA 86
V VL NF+E AL K + VEFYAPWCGHC +++ +AK+D+
Sbjct: 1131 VKVLVGKNFKEVALDKTKGVFVEFYAPWCGHCKQLAPIWDELADKFTDK-ADVVIAKMDS 1307
Query: 87 TEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLK 132
T ++ ++ V+ +PT+K+F D+ +Y R D V +++
Sbjct: 1308 T--ANEIEEVKVQSFPTLKYFPK-DSDEVIDYNGERTLDAFVKFVE 1436
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 92 LAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKR 134
L ++YG F+NG + EY+ GR+A DIV+WLKKR
Sbjct: 310 LGRKYGCTWISNP*IFRNGKDS---EYSGGRQAADIVSWLKKR 429
>35861
Length = 850
Score = 212 bits (540), Expect(3) = 2e-88, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 124/153 (81%)
Frame = +3
Query: 274 LSSFKRAAEGFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPES 333
L+ FK AA FKGK+LFI++D+ +N RILEFFGL K++ PAVRLI L +EMTKYKPES
Sbjct: 285 LAKFKAAAGDFKGKVLFIYLDTAIEENGRILEFFGLVKDDTPAVRLIKLGDEMTKYKPES 464
Query: 334 DELTAEKITEFCHRFLEGKIKPHLMSQEVPEDWDKQPVKVLVGANFEEVAFDEKKNVFVE 393
+L I++F F++GK+KPHL S+EVPEDWD +PVKVLV NF+EVA D+ K+VFVE
Sbjct: 465 GDLDTATISKFVQDFMDGKLKPHLKSEEVPEDWDAKPVKVLVSKNFKEVALDKSKDVFVE 644
Query: 394 FYAPWCGHCKQLAPIWDKLGETYKDHENIIIAK 426
FYAPWCGHCKQL PIWD+LGE ++D ++++IAK
Sbjct: 645 FYAPWCGHCKQLVPIWDELGEKFQDSDDVVIAK 743
Score = 100 bits (250), Expect(3) = 2e-88, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%)
Frame = +2
Query: 180 AIDDIPFGITSNSGVFSKYQLDKDGVVLFKKFDEGRNNFEGEITKEKLLDFIKHNQLPLV 239
IDD+PFGITS+ +F +Y++DKDGVVL KKFDEGRN+F G+I E + FIK NQLPL+
Sbjct: 5 GIDDVPFGITSDKDIFKEYKMDKDGVVLXKKFDEGRNDFSGDIEAEAVAKFIKENQLPLI 184
Query: 240 IEFTEQTAPKIFGGEIKT 257
+EFT+++A KI +T
Sbjct: 185 VEFTQESAQKILAAT*RT 238
Score = 52.8 bits (125), Expect(3) = 2e-88, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1
Query: 424 IAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGE 462
+ KMDSTANEVE V + SFPTL+ FP +D V+DYNGE
Sbjct: 736 LPKMDSTANEVEEVVIQSFPTLQIFP*GSDE-VVDYNGE 849
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 28 VLVLKKSNFEE-ALAAHKYLLVEFYAPWCGHC 58
V VL NF+E AL K + VEFYAPWCGHC
Sbjct: 576 VKVLVSKNFKEVALDKSKDVFVEFYAPWCGHC 671
>06936
Length = 2198
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 232/467 (49%), Gaps = 21/467 (4%)
Frame = +3
Query: 27 NVLVLKKSNFEEALAAHKYLLVEFYAPWCGHCXXXXXXXXXXXXXXXXXGSEIRLAKVDA 86
+VL LKKS+F+ + H +LVEF+APWCGHC + LAKVD
Sbjct: 147 DVLDLKKSDFQSTIEKHSLMLVEFFAPWCGHCKKLAPQYELAATALLKNDPPVPLAKVDC 326
Query: 87 TEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLSDTA 146
TEE+D+ +YGV GYPT+K F+ G+ K+Y R+ D IV ++ K GP + L
Sbjct: 327 TEETDVCSKYGVSGYPTLKVFRGGEVN--KDYDGPRDKDGIVKYMAKMAGPTSKELKSVE 500
Query: 147 AAESLVDSSEVTVIGFFKDVESDSAKQFLLAAEAIDDIPFGITSNSGVFSKYQLDKDGVV 206
E + V+GFF S A A++ D + FG T++S V K + KD +V
Sbjct: 501 EYEKFLSRDGSCVVGFFTGANSGMADTLKKVADSEDGLRFGYTTSSEVLEKAKY-KDEIV 677
Query: 207 LFK------KFDEGRNNFEGEITKEKLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHIL 260
LF+ KF++ F G+ + F+K L T A + K ++
Sbjct: 678 LFRPQKMANKFEDTAVKFTGDANSHNIKKFLKEESFGLCALRTMDNA-----ADFKKPVV 842
Query: 261 LFLPKSVSDYDGKLSSFKRAA----------EGFKGKILFIFIDSDHTDNQRILEFFGLK 310
+ + K S++ R EG KI F + + DN+ + GLK
Sbjct: 843 IAFFDVDYVKNAKGSNYWRNRVMKVGKKLRDEGL--KINFAVSNKNEFDNELVE--CGLK 1010
Query: 311 K----EECPAVRLITLEEEMTKYKPESDELTAEKITEFCHRFLEGKIKPHLMSQEVPEDW 366
+ + PA+ ++ K+K + E + +F L+GK++ ++ S+ VP D
Sbjct: 1011EAVDASDKPAI--CAYNDKNQKFKMDQ-EFAMDTFEQFVRDMLDGKLEAYMKSEPVP-DN 1178
Query: 367 DKQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAK 426
+ VKV VG NFEE+ D +K+V +EFYAPWCGHCK LAP +D+L E K+ I+IAK
Sbjct: 1179SENAVKVAVGRNFEELVNDPEKDVLIEFYAPWCGHCKTLAPKYDELAEKLKNEPEIVIAK 1358
Query: 427 MDSTANEV-EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFL 472
MD+TAN+V V FPTL F P + + Y G R ++ F K+L
Sbjct: 1359MDATANDVPPPYDVRGFPTLYFAPKGSKSSPKKYEGGREVNDFVKYL 1499
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Frame = +3
Query: 25 EDNVLVLKKSNFEEALA-AHKYLLVEFYAPWCGHCXXXXXXXXXXXXXXXXXGSEIRLAK 83
E+ V V NFEE + K +L+EFYAPWCGHC EI +AK
Sbjct: 1182 ENAVKVAVGRNFEELVNDPEKDVLIEFYAPWCGHCKTLAPKYDELAEKLKNE-PEIVIAK 1358
Query: 84 VDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKK 133
+DAT +D+ Y VRG+PT+ F G +SPK+Y GRE +D V +L K
Sbjct: 1359 MDATA-NDVPPPYDVRGFPTLYFAPKGSKSSPKKYEGGREVNDFVKYLAK 1505
>28335
Length = 601
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 76/121 (62%), Gaps = 1/121 (0%)
Frame = -2
Query: 353 IKPHLMSQEVPEDWDKQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKL 412
I+P+L SQ +P++ ++ PVK VG F+++ + KK+V +EFYAPWCGHC+QL P +++L
Sbjct: 597 IQPYLKSQPIPQN-EEGPVKTAVGRTFDKIVNNPKKDVLIEFYAPWCGHCQQLEPKYNEL 421
Query: 413 GETYKDHENIIIAKMDSTANEVE-AVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKF 471
KD +I+ AK+D+TAN+ +V FP + F P Y G+R +D K+
Sbjct: 420 ATLLKDEPDIVXAKIDATANDTPTPYEVKGFPAIYFSPKRFKEFPKKYEGDREVDAMLKY 241
Query: 472 L 472
+
Sbjct: 240 I 238
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%)
Frame = -2
Query: 44 KYLLVEFYAPWCGHCXXXXXXXXXXXXXXXXXGSEIRLAKVDATEESDLAQQYGVRGYPT 103
K +L+EFYAPWCGHC +I AK+DAT +D Y V+G+P
Sbjct: 495 KDVLIEFYAPWCGHCQQLEPKYNELATLLKDE-PDIVXAKIDAT-ANDTPTPYEVKGFPA 322
Query: 104 IKFFKNGDTASPKEYTAGREADDIVNWLKK 133
I F PK+Y RE D ++ ++ +
Sbjct: 321 IYFSPKRFKEFPKKYEGDREVDAMLKYIAR 232
>36159
Length = 369
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = -1
Query: 396 APWCGHCKQLAPIWDKLGETYKDHENIIIAKMDS 429
APWCGHCKQL PIWD+LGE ++D ++++IAKMDS
Sbjct: 102 APWCGHCKQLVPIWDELGEKFQDSDDVVIAKMDS 1
>18943
Length = 1035
Score = 60.8 bits (146), Expect(2) = 7e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Frame = +2
Query: 78 EIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGP 137
++ AKVD +E +A QY + YPT+K F+NG KE+ R AD + ++++
Sbjct: 278 KVLFAKVDCDKEVTIASQYRISKYPTLKLFRNGQMVK-KEFRGQRSADALAAFIREELKD 454
Query: 138 AATTLSDTAAAESLVDSSEVTVIGFFKDVESDSAKQFLLAAEAIDDIPFGITSNSGVFSK 197
+ + E L D+ + VIG+F+ ESD+ K FL A ++ D T+ V +
Sbjct: 455 SVVDHNTLDKLEEL-DTKKRQVIGYFEAKESDNYKTFLRVASSLRDNCIFNTAVGPVSAS 631
Query: 198 YQLDKDGVVLFKKFDEGRNN--FEGEITK-EKLLDFIKHNQLPLVIEFTEQTAPKI 250
+ D V F+ R + F G + ++LL + +PLV E T + A ++
Sbjct: 632 ERTGGDYVA-FRPPHTQRQDVVFMGPLNNFDQLLSWALDKCVPLVREITFENAEEL 796
Score = 24.3 bits (51), Expect(2) = 7e-11, Method: Compositional matrix adjust.
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +3
Query: 29 LVLKKSNFEEALAAHKYLLVEFYAPWC 55
+ L N ++ + + V FYA WC
Sbjct: 123 VALNNDNINTIISRNDVVFVNFYADWC 203
>21509
Length = 754
Score = 53.5 bits (127), Expect(2) = 2e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = -3
Query: 81 LAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKR-TGPAA 139
+A VDAT + +L +Y V+GYPT+K+FK+G A EY+ GR +D V+++KK GP
Sbjct: 569 VAAVDATLDPELGNKYDVKGYPTLKYFKDGKLAF--EYSGGRSSDAFVSFMKKAGAGPTL 396
Query: 140 TT 141
T
Sbjct: 395 PT 390
Score = 26.2 bits (56), Expect(2) = 2e-09, Method: Compositional matrix adjust.
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 48 VEFYAPWCGHC 58
YAPWCGHC
Sbjct: 663 CHVYAPWCGHC 631
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -1
Query: 31 LKKSNFEEALAAHKYLLVEFYAPWCGHC 58
L + FE +AA++ LV FYAPWCGHC
Sbjct: 346 LTDATFESFIAANRRTLVMFYAPWCGHC 263
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 371 VKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIW 409
V L A FE ++ + V FYAPWCGHCK++ P +
Sbjct: 355 VNHLTDATFESFIAANRRTL-VMFYAPWCGHCKKMKPAY 242
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 392 VEFYAPWCGHCKQ 404
YAPWCGHCK+
Sbjct: 663 CHVYAPWCGHCKK 625
>18455
Length = 499
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +2
Query: 389 NVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANE--VEAVKVHSFPTLK 446
N FV+F+APWC HC++LAPIW++L + + I+K+D T + +V +PTL
Sbjct: 194 NHFVKFFAPWCSHCQRLAPIWEELAKALIKEPSATISKIDCTQYRSICQDFEVKGYPTLL 373
Query: 447 FFPASADRTVIDYNGERTLDGFKKFLE 473
+ + + Y G R + K ++E
Sbjct: 374 WI--EDGKKIEKYAGARDMVTLKTYVE 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%)
Frame = +2
Query: 28 VLVLKKSNFEEALAAHKYLLVEFYAPWCGHCXXXXXXXXXXXXXXXXXGSEIRLAKVDAT 87
V+ L + F + +++ + V+F+APWC HC S ++K+D T
Sbjct: 146 VVDLTEDTFAKHVSSGNHF-VKFFAPWCSHCQRLAPIWEELAKALIKEPSAT-ISKIDCT 319
Query: 88 EESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTG 136
+ + Q + V+GYPT+ + ++G ++Y R+ + +++K G
Sbjct: 320 QYRSICQDFEVKGYPTLLWIEDGKKI--EKYAGARDMVTLKTYVEKMIG 460
>14392
Length = 468
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +2
Query: 405 LAPIWDKLGETYKDHENIIIAKMDSTANEVEA-VKVHSFPTLKFFPASADRTVIDYNGER 463
L PI+++L E +D E++ I KMD+TAN+V V FPTL + P + + YNG R
Sbjct: 2 LTPIYEELAEKLQD-EDVAIVKMDATANDVPPEFNVRGFPTLFWLPKDSKNKPVSYNGGR 178
Query: 464 TLDGFKKFL 472
LD F K++
Sbjct: 179 ELDDFIKYI 205
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 78 EIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKK 133
++ + K+DAT +D+ ++ VRG+PT+ + P Y GRE DD + ++ K
Sbjct: 47 DVAIVKMDATA-NDVPPEFNVRGFPTLFWLPKDSKNKPVSYNGGRELDDFIKYIAK 211
>04779
Length = 910
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +1
Query: 77 SEIRLAKVDATEESDLAQQYGVRGYPTIKFF-KNGDTAS-PKEYTAGREADDIVNW 130
+++ +DAT + A +Y VRGYPTIKFF N + AS +EY GR A DI+ W
Sbjct: 10 GKVKFGALDATAHQNKAAEYNVRGYPTIKFFPANSNRASDAQEYNGGRTASDIIAW 177
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
Frame = +1
Query: 427 MDSTANEVEAVK--VHSFPTLKFFPASADRT--VIDYNGERT 464
+D+TA++ +A + V +PT+KFFPA+++R +YNG RT
Sbjct: 31 LDATAHQNKAAEYNVRGYPTIKFFPANSNRASDAQEYNGGRT 156
>04510
Length = 685
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 24 EEDNVLVLKKSNFEEALAAHKYLLVEFYAPWCGHC 58
+ +VL LKKS+F+ + H +LVEF+APWCGHC
Sbjct: 344 QASDVLDLKKSDFQSTIEKHSLMLVEFFAPWCGHC 448
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +2
Query: 390 VFVEFYAPWCGHCKQLAPIWD 410
+ VEF+APWCGHCK+LAP ++
Sbjct: 410 MLVEFFAPWCGHCKKLAPQYE 472
>30644
Length = 845
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -1
Query: 19 ADALEEEDNVLVLKKSNFEEALAAHKYLLVEFYAPWCGHC 58
A+ EE V L+ SNF++ L H +LV FYAPWCGHC
Sbjct: 131 AEWSEEPSEVAHLEDSNFDDFLKQHPSVLVMFYAPWCGHC 12
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = -1
Query: 365 DWDKQPVKVLVGANFEEVAFD----EKKNVFVEFYAPWCGHCKQ 404
+W ++P +V A+ E+ FD + +V V FYAPWCGHCK+
Sbjct: 128 EWSEEPSEV---AHLEDSNFDDFLKQHPSVLVMFYAPWCGHCKK 6
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = -3
Query: 366 WDKQP-----VKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAP 407
WD+ P V + ++ +K V FYAPWCG+CK++ P
Sbjct: 504 WDEDPTATDVVHIDTDDGLTKLLKKDKSAALVMFYAPWCGYCKRMKP 364
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 47 LVEFYAPWCGHC 58
LV FYAPWCG+C
Sbjct: 414 LVMFYAPWCGYC 379
>15159
Length = 1945
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 35 NFEEALAAHKYLLVEFYAPWCGHCXXXXXXXXXXXXXXXXXGSEIRLAKVDATEESDLAQ 94
+FE+A+ + ++V+F+A WCG C + +++ VD E DLA
Sbjct: 105 DFEKAIQGGQLVVVDFHATWCGPCKVIAPKLAKWSEEDRFKET-VKIISVDVDELEDLAG 281
Query: 95 QYGVRGYPTIKFFK 108
+ G+ PT F +
Sbjct: 282 EQGISAMPTFFFLE 323
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 371 VKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGE--TYKDHENIIIAKMD 428
+K+ +FE+ A + V V+F+A WCG CK +AP K E +K+ II +D
Sbjct: 84 IKISSADDFEK-AIQGGQLVVVDFHATWCGPCKVIAPKLAKWSEEDRFKETVKIISVDVD 260
Query: 429 STANEVEAVKVHSFPTLKFF 448
+ + + PT F
Sbjct: 261 ELEDLAGEQGISAMPTFFFL 320
>07257
Length = 1477
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -3
Query: 390 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEVEAVKVHSFPTLKFFP 449
V V FYAPWC C AP ++ L + E + + + + V + P + F
Sbjct: 1289 VLVMFYAPWCHFCANTAPHYNALARAFPQLEVLAVDTVHFSNLNARFGTV-AVPNIMLFH 1113
Query: 450 ASADRTVIDYN-GERTLDGFKKFL 472
S R+ + +N ER F +F+
Sbjct: 1112 QS--RSAVRFNHTERDFHTFLQFI 1047
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 35/91 (38%)
Frame = -3
Query: 46 LLVEFYAPWCGHCXXXXXXXXXXXXXXXXXGSEIRLAKVDATEESDLAQQYGVRGYPTIK 105
+LV FYAPWC C ++ + VD S+L ++G P I
Sbjct: 1289 VLVMFYAPWCHFCANTAPHYNALARAF----PQLEVLAVDTVHFSNLNARFGTVAVPNIM 1122
Query: 106 FFKNGDTASPKEYTAGREADDIVNWLKKRTG 136
F +A +T R+ + ++ TG
Sbjct: 1121 LFHQSRSAVRFNHTE-RDFHTFLQFIANTTG 1032
>38795
Length = 792
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%)
Frame = +1
Query: 300 NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAEKITEFCHRFLEGKIKPHLMS 359
NQ+ L+++G + RL LE + +YK E D+++ K + RF G K +
Sbjct: 343 NQKKLQYYGGNYDSYVQTRLELLENQAKRYKWEQDQISHMK--NYIARFGHGSAKLARQA 516
Query: 360 QEVPEDWDKQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCG 400
Q +K K++ G E+V D+ + FY P CG
Sbjct: 517 QSK----EKTLKKMVDGGLTEKVTSDKT----LSFYFPSCG 615
>01000
Length = 1541
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 84 VDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDI 127
VD T++S+ +RGYPT+ F+NG +++ R DD+
Sbjct: 1541 VDCTKQSETCNAQSIRGYPTLAVFQNG--KRQEDFKGTRSLDDL 1416
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6753322|ref|NP_033967.1| chaperonin containing Tcp1,
subunit 4 (delta) [Mus musculus]
(539 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12796 491 e-139
06409 479 e-135
01159 320 7e-88
33770 234 4e-62
05356 132 1e-60
29631 134 2e-43
09900 157 8e-39
29864 147 1e-35
02673 79 3e-15
17249 65 7e-11
30661 64 1e-10
29327 64 2e-10
34332 37 0.024
10291 32 0.57
16801 30 3.5
>12796
Length = 1316
Score = 491 bits (1264), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/339 (69%), Positives = 292/339 (86%), Gaps = 1/339 (0%)
Frame = -3
Query: 201 TSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGI-TRVEKAKIGLIQFCLSAPKTD 259
TSVDL++IK+++ LGGT++D ELV GLV T + A + R+EKAKIGLIQFC+SAPKTD
Sbjct: 1314 TSVDLKNIKVIRSLGGTVEDTELVNGLVFTSRSAGTNAPKRIEKAKIGLIQFCISAPKTD 1135
Query: 260 MDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNK 319
MD+ ++VSDYA MDRVL+EER+YILN+VKQIKK GCNVLL+QKSILRDA+SDLA HFL+K
Sbjct: 1134 MDHNVIVSDYAAMDRVLKEERSYILNIVKQIKKAGCNVLLVQKSILRDAVSDLAQHFLDK 955
Query: 320 MKIMVVKDVEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVSLNGSGKLFKITGC 379
+K +VVKDVEREDIEF+CKT+ +P+A +D FTA+ + SA+L EEV+ +G+ K KITG
Sbjct: 954 IKCLVVKDVEREDIEFVCKTLHCRPIASLDHFTAENMSSADLVEEVA-SGTNKFVKITGI 778
Query: 380 TSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEY 439
+ G+TV+I+ RGSNKLV+EEA RS+HDALCV+RCLV+ RA I GGGAPEIE+AL+L
Sbjct: 777 QNQGRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVRNRAQIVGGGAPEIEMALQLAAA 598
Query: 440 SRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGG 499
++T+ G+++YC RAFADA+EVIPSTLAENAGLNPI+TVTELRNRHAQGEK GINVRKG
Sbjct: 597 AQTVDGVDAYCYRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGA 418
Query: 500 ISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVNT 538
I++I E VVQPLLVS SA+TLATETVRSILKIDD+VNT
Sbjct: 417 ITDIFAENVVQPLLVSTSAITLATETVRSILKIDDIVNT 301
>06409
Length = 1533
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/301 (74%), Positives = 266/301 (88%)
Frame = -3
Query: 237 GITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCN 296
G ++VEKAKIG IQFC+S PKTDM+NQ++VSDY QMDRVLREER YIL++VK+IKK GCN
Sbjct: 1504 GPSKVEKAKIGFIQFCISPPKTDMENQVIVSDYTQMDRVLREERNYILDIVKKIKKAGCN 1325
Query: 297 VLLIQKSILRDALSDLALHFLNKMKIMVVKDVEREDIEFICKTIGTKPVAHIDQFTADML 356
VLLIQKSILRDA+SDLALHFL KMKIMVVKD+ERED+EF+CKT+G +PVA +D F + L
Sbjct: 1324 VLLIQKSILRDAVSDLALHFLAKMKIMVVKDIEREDVEFVCKTLGCRPVASLDHFLPENL 1145
Query: 357 GSAELAEEVSLNGSGKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLV 416
GSA+L EEV GS K+ K TG +PG+TVT+++RGSNKLV+EEA+RS+HDALCVIRCLV
Sbjct: 1144 GSADLIEEVQ-TGSSKIVKATGIANPGQTVTVLIRGSNKLVLEEADRSLHDALCVIRCLV 968
Query: 417 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPIST 476
KK+ALIAGGGAPE E+++RL Y+ TL+GME YC RAFA+A+EVIP TLAENAGLNPIST
Sbjct: 967 KKKALIAGGGAPETEMSMRLAAYANTLAGMEQYCFRAFAEALEVIPFTLAENAGLNPIST 788
Query: 477 VTELRNRHAQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
VT LR RHAQGE+T GINVRKG I+NILEE V+QPLLVS SA+TLA+ETVRSILKIDD+V
Sbjct: 787 VTXLRTRHAQGERTAGINVRKGAITNILEENVLQPLLVSTSAITLASETVRSILKIDDIV 608
Query: 537 N 537
N
Sbjct: 607 N 605
>01159
Length = 2613
Score = 320 bits (821), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 200/529 (37%), Positives = 320/529 (60%), Gaps = 18/529 (3%)
Frame = +3
Query: 25 QDRDKPAQI-----RFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILK 79
+D+DK +++ S+I AAK+VA ++TSLGPKG+DKM+ G GDVT+TNDGATIL
Sbjct: 150 RDQDKKSRLTGIEAHKSHILAAKSVASILKTSLGPKGLDKMMVSGDGDVTVTNDGATILD 329
Query: 80 QMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQK 139
M V H A+++V+LSK+QD E GDGTT VV++AG+LL+ KLL +GIHP I++ ++
Sbjct: 330 MMDVDHQIAKLMVQLSKSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEI 509
Query: 140 ALEKGLEILTDMS--RPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDP 197
A + +E L +S V L + E L+ A T+L SK+V++ ++ ++V+A+M V D
Sbjct: 510 AAKCAVETLDKISDNYEVDLKNAEPLIKLAMTTLGSKIVNRCHRQMAKIAVDAIMSVAD- 686
Query: 198 ATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEK-AKIGLIQFCLSAP 256
VD IK+ K+GG ++D LV+G+V+ + +++ + +V K AKI ++ P
Sbjct: 687 LKRKDVDFELIKVEGKVGGKLEDTMLVKGVVVDKDMSHPQMPKVVKDAKIAILTCPFEPP 866
Query: 257 KTDMDNQI---VVSDYAQMDRVLREERAYILN----LVKQIKKTGCNVLLIQKSILRDAL 309
K +++ V DY ++ R Y LN +V+ +K G N+++ Q
Sbjct: 867 KPKTKHKLDITSVEDYKKL-------REYELNKFESMVQSVKDKGANLVICQW-----GF 1010
Query: 310 SDLALHFLNKMKIMVVKDVEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVSLNG 369
D A H L + ++ V+ V +IE I G + V ++ T + LG A + E++
Sbjct: 1011DDEANHLLLQRELPAVRWVGGPEIELIAIATGGRIVPRFEELTTEKLGKAGIVRELTFGT 1190
Query: 370 S-GKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAP 428
+ ++ I C + + VTI +RG NK+++EEA+RS+HDALCVIR LV+ ++ GGGAP
Sbjct: 1191TKDRMLVIEECLNT-RAVTIFIRGGNKMIVEEAKRSLHDALCVIRNLVRDNRVVYGGGAP 1367
Query: 429 EIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGE 488
EI ++ + E + +S +E Y VR+F++A+E +P LAEN+GL PI T+ E+++R + E
Sbjct: 1368EIAASVAVAEAADKISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKSRQVK-E 1544
Query: 489 KTT--GINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDV 535
K GI+ G +++ E+ V++ L + LAT+ VR ILKIDD+
Sbjct: 1545KNPRLGIDCLLKGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDI 1691
>33770
Length = 484
Score = 234 bits (598), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 148/161 (91%)
Frame = +1
Query: 59 KMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLD 118
KMIQ GDVTITNDGATILKQMQVLHPAA+MLVELSKAQDIE GDGTT+VV++AGSLLD
Sbjct: 1 KMIQAANGDVTITNDGATILKQMQVLHPAAKMLVELSKAQDIEXGDGTTTVVVLAGSLLD 180
Query: 119 SCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLSDRETLLNSATTSLNSKVVSQ 178
+ KLL KGIHPT+ISE+FQKA K +E+L M +P++LSDRE+LL+SA+TSLNSKVVSQ
Sbjct: 181 ASAKLLAKGIHPTMISEAFQKAASKCVELLDGMVKPLELSDRESLLSSASTSLNSKVVSQ 360
Query: 179 YSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTID 219
YSS+L+P++V+AV+KVIDPATAT+VDL+DIKI+KKLGGTID
Sbjct: 361 YSSMLAPIAVDAVLKVIDPATATNVDLKDIKIIKKLGGTID 483
>05356
Length = 2339
Score = 132 bits (333), Expect(2) = 1e-60, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 153/269 (56%), Gaps = 4/269 (1%)
Frame = +2
Query: 35 FSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVEL 94
+ NI A K +A R++ GP G +KM+ + + +TND ATIL++++V HPAA+MLV
Sbjct: 278 YRNIEACKELAKTTRSAYGPHGQNKMVINHLEKLFVTNDAATILRELEVQHPAAKMLVLA 457
Query: 95 SKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDM--S 152
+ Q+ E GDGT V++ AG+LL++ +LL+ G+ T + E ++ AL+K EIL +
Sbjct: 458 AHQQEQECGDGTNFVLVFAGALLENAEQLLRMGLSVTEVIEGYELALKKAHEILPKLVIG 637
Query: 153 RPVQLSDRETLLNSATTSLNSKVVSQYSS--LLSPMSVNAVMKVIDPATATSVDLRDIKI 210
L ++E + + TS+ SK QY + L+ + +A + V+ + SVD ++++
Sbjct: 638 HVKNLRNKEEVKTAIRTSVMSK---QYGNEDFLADLITDACVSVLPAKISFSVD--NVRV 802
Query: 211 VKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYA 270
K LG + ++G+V ++V IT+VEKAK+ + L + +T+ +++ +
Sbjct: 803 CKILGCGLLQSSTIQGMVFKRQVEGE-ITKVEKAKVAVFTCPLDSMQTETKGTVLIKNAE 979
Query: 271 QMDRVLREERAYILNLVKQIKKTGCNVLL 299
++ + E + +K IK+ G NV++
Sbjct: 980 ELMSFSKGEEDMMEEQIKGIKEAGVNVIV 1066
Score = 119 bits (298), Expect(2) = 1e-60, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 125/233 (53%), Gaps = 5/233 (2%)
Frame = +1
Query: 309 LSDLALHFLNKMKIMVVKDVEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVSLN 368
+ DLA H+ NK K+MV++ + + D+ +CK+I + + + G +L V ++
Sbjct: 1078 VGDLAQHYCNKYKVMVIRLLSKWDLRRLCKSICATALPKVTTPRNEECGYCDL---VYVD 1248
Query: 369 GSGK----LFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAG 424
G+ +F+ SP T+++RGS ++++ ER++ D + + L K L+ G
Sbjct: 1249 EIGETPVVIFQQNKDESP--ITTVIIRGSTDNIMDDIERALDDGVNTFKALTKDDRLVPG 1422
Query: 425 GGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH 484
GA EIELA ++T Y +L G+E Y V+ FA+++EVIP LAEN G+ +++L H
Sbjct: 1423 AGATEIELAKQITTYGESLPGLEQYAVKKFAESLEVIPRALAENTGMKATDILSKLYAAH 1602
Query: 485 AQGEKTTGINV-RKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
+G++ G+++ G + + + + L L A ++L++D ++
Sbjct: 1603 QEGQQNAGVDIDDSGSVLDAKQANLTDLYLNRYWGLKFAAAAACTVLRVDQII 1761
>29631
Length = 1257
Score = 134 bits (337), Expect(2) = 2e-43, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 98/143 (68%), Gaps = 1/143 (0%)
Frame = +3
Query: 27 RDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHP 86
R+ +++ NI+A K +AD IRT LGPK M KM+ D G + +TNDG IL+++ V HP
Sbjct: 30 RESGRKVQLGNIAAGKTIADVIRTCLGPKSMLKMLMDPMGGIVMTNDGNAILREINVQHP 209
Query: 87 AARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLE 146
AA+ ++E+++ QD E GDGT SV+I+AG +L + L++ +HPT+I ++++ALE LE
Sbjct: 210 AAKSMIEVARTQDEETGDGTKSVIILAGEVLSVAEQFLEQQMHPTVIIAAYRQALEDTLE 389
Query: 147 IL-TDMSRPVQLSDRETLLNSAT 168
+L T + P+ +SDR +LN T
Sbjct: 390 VLRTKICTPIDISDRNQMLNIVT 458
Score = 60.1 bits (144), Expect(2) = 2e-43, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Frame = +1
Query: 166 SATTSLNSKVVSQYSSLLSPMSVNAVMKV-IDPATATSVDLRDIKIVKKL-GGTIDDCEL 223
S+ + L +K +S++ L ++++A V ++ +D++ V+K+ GGT+++ E+
Sbjct: 451 SSQSCLGTKFISKWMDLACQIALDATTTVFMEENGRKEIDIKRYAKVEKIPGGTMEESEV 630
Query: 224 VEGLVLTQKVANSGITR-VEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAY 282
++G+ + + V + + R +E +I L+ L K + I +S ++L+ E Y
Sbjct: 631 LKGIXVNKDVVHXKMKRRIENPRIMLLDCNLEYKKGESATNIEISKEEDFAKILQLEEEY 810
Query: 283 ILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDVEREDIEFICKTIGT 342
I + +I ++++ +K + SDLA HFL K I V++ V + D I + G
Sbjct: 811 IRKMCDEIIALKPDLVITEKGV-----SDLAQHFLLKAGISVLRRVRKTDNNRIARACGA 975
Query: 343 KPVAHIDQFTADMLGSA 359
D+ + +GS
Sbjct: 976 TIANRTDELKEEDMGSG 1026
>09900
Length = 1305
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 159/282 (56%), Gaps = 2/282 (0%)
Frame = +3
Query: 257 KTDMDN-QIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALH 315
K++ DN ++ V + + ++ E + + + +I ++G V+L + I D+A
Sbjct: 93 KSERDNAEVRVDNVQEYQSIVDAEWKILYDKLDKIHQSGAKVVLSKLPI-----GDVATQ 257
Query: 316 FLNKMKIMVVKDVEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVSLNGS-GKLF 374
+ + V ED+ K G + T D+LG+ +L +E+ + G +F
Sbjct: 258 YFADRDMFCAGRVPEEDLRRTMKACGGSIQTTVQSLTPDVLGTCQLFDEIQIGGERFNMF 437
Query: 375 KITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAL 434
K GCT +T TI++RG + +EE ERS+HDA+ ++R +K +++AGGGA E+E++
Sbjct: 438 K--GCTM-ARTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMEVSY 608
Query: 435 RLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGIN 494
L E+S T++G E + A+A A+EVIP L +NAG + + + +LR +HAQG G+N
Sbjct: 609 HLREHSHTIAGKEQLLMSAYAKALEVIPRQLCDNAGFDATNILNKLRQKHAQGGTWYGVN 788
Query: 495 VRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
+ + I++ E+ V +P +V ++ALT A+E IL +D+ +
Sbjct: 789 ILREDIADNFEDCVWEPAVVKINALTAASEATALILSVDETI 914
>29864
Length = 1026
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 149/261 (57%), Gaps = 1/261 (0%)
Frame = +1
Query: 37 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSK 96
NI+AAK + D +R++LGPKG KM+ G GD+ +T DG +L +MQ+ HP A ++ ++
Sbjct: 175 NIAAAKGLQDVLRSNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIARVAT 354
Query: 97 AQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQ 156
AQD GDGTTS V+I G LL + +G+HP +I+E F+ A K LE+L ++ +
Sbjct: 355 AQDDITGDGTTSNVLIIGELLKQADLYIAEGLHPRLITEGFELARNKALEVLEEVKVKRE 534
Query: 157 LSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGG 216
+ DRETL+ A TSL +KV ++ + LL+ V+AV+ + P +DL +++++
Sbjct: 535 V-DRETLVQVARTSLRTKVHTELADLLTEHVVDAVLAIQXPGEG--IDLHMVELMEMQHK 705
Query: 217 TIDDCELVEGLVLTQKVANSGITRVEK-AKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRV 275
T D LV GLV+ + + + K A I L KT++++ + +++
Sbjct: 706 TDLDSTLVRGLVMDHGARHPDMKKHTKDAFILTCNVSLEYEKTEVNSGFFYKTAQEREKL 885
Query: 276 LREERAYILNLVKQIKKTGCN 296
+ ER +I ++++K C+
Sbjct: 886 VEAERTFI---DERVRKNHCS 939
>02673
Length = 1243
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Frame = +1
Query: 426 GAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHA 485
GAPEI ++ + E + +S +E Y VR+F++A+E +P LAEN+GL PI T+ E+++R
Sbjct: 1 GAPEIAASVAVAEAADKISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKSRQV 180
Query: 486 QGEKTT-GINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDV 535
+ + GI+ G +++ E+ V++ L + LAT+ VR ILKIDD+
Sbjct: 181 KEKNPRLGIDCLLKGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDI 333
>17249
Length = 909
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +3
Query: 457 AMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTT-GINVRKGGISNILEEMVVQPLLVS 515
A+EVI TL +N G N I T+T LR +HAQG+K T GI+ G I ++ E + +PL V
Sbjct: 12 ALEVISRTLIQNCGANTIRTLTALRAKHAQGQKNTWGIDGNTGNIVDMAEFGIWEPLSVK 191
Query: 516 VSALTLATETVRSILKIDDVVN 537
+ A ET +L+IDD+V+
Sbjct: 192 LQVYKTACETAILLLRIDDIVS 257
>30661
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%)
Frame = +3
Query: 356 LGSAELAEEVSLNGSGKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCL 415
LG +L EEV + G KL K +G + G+ TIV+RG+ + +++EA RS+HDALCV+
Sbjct: 75 LGQCDLIEEVMI-GEDKLIKFSG-VALGEACTIVLRGATQQILDEAXRSLHDALCVLSQT 248
Query: 416 VKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIP 462
VK+ + GGG E+ +A +++ + G E A AME +P
Sbjct: 249 VKETRTVYGGGCSEMLMAEAVSQLAAKTPGKE-------AIAMEALP 368
>29327
Length = 2425
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +1
Query: 497 KGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
+G I+NILEE V+QPLLVS SA+TLA+ETVRSILKIDD+V
Sbjct: 163 QGAITNILEENVLQPLLVSTSAITLASETVRSILKIDDIV 282
>34332
Length = 714
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 426 GAPEIELALRLTEYSRTLSGMESYCVRAFAD 456
G EIELA ++T Y +L G+E Y V+ FA+
Sbjct: 93 GGKEIELAKQITTYGESLPGLEQYAVKKFAE 1
>10291
Length = 1066
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 491 TGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDV 535
TG V G +++ E+ V++ L + LAT+ VR ILKIDD+
Sbjct: 4 TGKGVGCRGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDI 138
>16801
Length = 1085
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -2
Query: 264 IVVSDYAQMDRVLREERAYI---LNLVKQIKKTGCNVLLIQKS 303
I+V+ Q+ ++ + E Y L L+KQIK GCNV + +S
Sbjct: 505 ILVNIVCQLPKIYQGENLYFTGQLVLIKQIKICGCNVSVFSQS 377
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|120407050|ref|NP_061356.2| nucleolar protein 5 [Mus
musculus]
(536 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02001 488 e-138
10550 306 2e-83
05297 104 1e-22
00700 69 5e-12
>02001
Length = 4146
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/454 (55%), Positives = 339/454 (74%), Gaps = 7/454 (1%)
Frame = -1
Query: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF 60
MLVLFET+ GYA+FK+L EKKL+ ++L+++FE E AN+IVKLK F+KFQD + AL+A
Sbjct: 4089 MLVLFETASGYAVFKLLKEKKLKHSENLFQDFENAESANEIVKLKRFQKFQDMSTALSAA 3910
Query: 61 TALMEGXXXX-XXXXXXXXXXXEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGI 119
TA EG +A E LAVADAKLG +IKE+ N+ C+ + +NELMR I
Sbjct: 3909 TAAFEGHISAPLKKLLKKLVSKDAQEELAVADAKLGNLIKEEFNIQCVANNNINELMRCI 3730
Query: 120 RSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNY 179
RSQ+D L V +++ AM LGLAHSLSRY++KFS DKVDTMIVQAIS LDD+DKE+NNY
Sbjct: 3729 RSQLDNL---VSDKDLHAMSLGLAHSLSRYKVKFSPDKVDTMIVQAISTLDDIDKEINNY 3559
Query: 180 IMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYXXXXXXXXXXXXXXXXXXXXXX 239
MR REWY WHFPEL K+++++ + + + K+G+++N
Sbjct: 3558 HMRAREWYAWHFPELPKVVTEHEAFIRTVMKLGNKQNATSCDLSDILPEEVETDVKEAAE 3379
Query: 240 ISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLI 299
ISMGTE+S++D+ I++LC Q++ + EYR QL+EYL++RM AIAPN+TV+VGELVGARLI
Sbjct: 3378 ISMGTEISDDDLTVIMYLCKQIVSLVEYRGQLFEYLKHRMGAIAPNLTVLVGELVGARLI 3199
Query: 300 AHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQSSPKHKGKIS 359
+HAGSL+NLAKH ASTVQILGAEKALFRALKS+ DTPKYGLIYHASLVGQ++PK+KGK+S
Sbjct: 3198 SHAGSLMNLAKHPASTVQILGAEKALFRALKSKHDTPKYGLIYHASLVGQANPKNKGKLS 3019
Query: 360 RMLAAKTVLAIRYDAFGEDSSSA--MGIENRAKLEARLRILEDRGIRKISGTGKALAKAE 417
RMLAAK+ LA R DA G+++++ +G ++ KL+ R+R LE+RG+++ISG GK +
Sbjct: 3018 RMLAAKSSLAARVDALGDENTTQKDIGAVHKLKLDMRIRQLENRGVQRISGRGKEGRTPQ 2839
Query: 418 KYEHKSEVKTYDPSGDSTLPTC----SKKRKIEE 447
+YE+ SEV+TY+ + DSTLP+ SKKRK+E+
Sbjct: 2838 RYENISEVRTYNTAADSTLPSVSPSGSKKRKVED 2737
>10550
Length = 1765
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 242/412 (58%), Gaps = 13/412 (3%)
Frame = -2
Query: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETP----EKANKIVKLKHFEKFQDTAEA 56
+ VLFE +VGYA+F+V K+ E+ L E K N +VK + F + A
Sbjct: 1737 LYVLFEHAVGYALFQV---KEFDELALLAPRVEQNVLDLSKFNSVVKFEALAAFTNAHNA 1567
Query: 57 LAAFTALMEGXXXXXXXXXXXXXXXEAHEPLAV----ADAKLGGVIKEKLNLSCIHSPVV 112
L + EG ++ + L V AD+KL I E L++SC+ + V+
Sbjct: 1566 LDNINCVSEGVLHEDLRTLLAKHVPKSSKKLKVMLGLADSKLAAAIVEALDISCVTTGVI 1387
Query: 113 NELMRGIRSQMDGLIPGVEPREMAA--MCLGLAHSLSRYRLKFSADKVDTMIVQAISLLD 170
+++RGIR L+ + E A LGL HS SR ++KF+ +VD MI+Q+I+LLD
Sbjct: 1386 PDILRGIRMHFAKLVGQHKLNEGTASKAQLGLGHSYSRAKVKFNVHRVDNMIIQSIALLD 1207
Query: 171 DLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNY---XXXXXXXXXX 227
LDK++N + MR REWY +HFPEL KI+ DN Y + +Q + DRK
Sbjct: 1206 QLDKDINTFSMRIREWYSYHFPELVKIVPDNYLYARTVQVIQDRKQMPEDNSQLEELLMD 1027
Query: 228 XXXXXXXXXXXXISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVT 287
+SMG +++ D+ NI LC +VI +SE+R +L +YL +RM ++APN+
Sbjct: 1026 SAKCQAVLDAARVSMGMDIAPIDLINIQALCARVIGLSEFRKELSQYLMDRMQSVAPNLA 847
Query: 288 VMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLV 347
++G+ VGARLIAHAGSL NLAK ASTVQILGAEKALFRALK++ +TPKYGLI+H++ +
Sbjct: 846 ALIGDQVGARLIAHAGSLTNLAKCPASTVQILGAEKALFRALKTKGNTPKYGLIFHSTFI 667
Query: 348 GQSSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGIENRAKLEARLRILE 399
G++ K+KG+ISR LA K +A R D F + SS G R ++E RL+ E
Sbjct: 666 GRAGAKNKGRISRYLANKCSIASRIDCFSDMPSSIFGDHLRQQVEDRLKFFE 511
>05297
Length = 530
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 88/153 (57%)
Frame = +2
Query: 243 GTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHA 302
GTE+S+ED+ ++ C + +SE + ++EY+++RM IAPN++++VG + A+L+ A
Sbjct: 5 GTELSDEDLMSVSEACDTAVGLSESKKHIFEYVESRMTFIAPNLSIIVGASIAAKLMGIA 184
Query: 303 GSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQSSPKHKGKISRML 362
G L L+K A + +LG++K + P G IY++ V + P + K +R+L
Sbjct: 185 GGLTYLSKMPADNIILLGSQKRTLSGFSTTAILPHTGFIYYSDTVQKLPPDLRRKAARLL 364
Query: 363 AAKTVLAIRYDAFGEDSSSAMGIENRAKLEARL 395
A KT L R D F +G + RA++E +L
Sbjct: 365 AGKTALCARVDGFHGSVDGKVGDDLRAEVEGKL 463
>00700
Length = 1051
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Frame = +1
Query: 155 ADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDR 214
AD +IV A ++ ++D E+N ++ Y FPEL ++ + Y ++++G+
Sbjct: 286 ADPEYKLIVDANNMTVEIDNEINVIHQFVKDVYNKRFPELESLVPTAMEYISTVKELGNN 465
Query: 215 ---KNYXXXXXXXXXXXXXXXXXXXXXXISMGTEVSEEDICNILHLCTQVIEISEYRTQL 271
K+ + GTE+S+ED+ ++ C + +SE + +
Sbjct: 466 ILEKSKNNEALQEILTSATIMVVSVTASTTQGTELSDEDLMSVSEACDTAVGLSESKKHI 645
Query: 272 YEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKS 331
+EY+++RM IAPN++++VG + + AA + +LG++K +
Sbjct: 646 FEYVESRMTFIAPNLSIIVGASIA-------------VQXAADNIILLGSQKRTLSGFST 786
Query: 332 RRDTPKYGL 340
P + L
Sbjct: 787 TAILPPHRL 813
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|33469023|ref|NP_083087.1| elongation protein 3
homolog [Mus musculus]
(547 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11276 483 e-137
>11276
Length = 1229
Score = 483 bits (1244), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/280 (85%), Positives = 259/280 (92%)
Frame = +3
Query: 267 ACESFHLAKDSGFKVVTHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGT 326
CESF ++KD+GFKVV HMMPDLPNVG ERD+EQFIE+FENPAFR DGLK+YPTLVIRGT
Sbjct: 3 VCESFQMSKDAGFKVVAHMMPDLPNVGWERDVEQFIEYFENPAFRSDGLKIYPTLVIRGT 182
Query: 327 GLYELWKSGRYRSYSPSDLIELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLREL 386
GLYELWK+GRY+SY PS L++L+ARILALVPPWTRVYRVQRDIPMPLVSSGVE GNLREL
Sbjct: 183 GLYELWKTGRYKSYPPSMLVDLIARILALVPPWTRVYRVQRDIPMPLVSSGVERGNLREL 362
Query: 387 AFARMKDLGIQCRDVRTREVGIQEIHHRVRPYQVELVRRDYVANGGWETFLSYEDPDQDI 446
A ARM DLG +CRDVRTREVGIQEIHH+V+PY+ EL+RRDYVANGGWETFLSYEDP+QDI
Sbjct: 363 ALARMADLGTKCRDVRTREVGIQEIHHKVKPYEAELIRRDYVANGGWETFLSYEDPEQDI 542
Query: 447 LIGLLRLRKCSEETFRFELGGGVSIVRELHVYGSVVPVSSRDPTKFQHQGFGMLLMEEAE 506
LIGLLRLRKCS +TFR EL GG SIVRELHVYGSVVPV +RDPTKFQHQGFGMLLMEEAE
Sbjct: 543 LIGLLRLRKCSPDTFRPELVGGCSIVRELHVYGSVVPVHARDPTKFQHQGFGMLLMEEAE 722
Query: 507 RIAREEHGSGKMAVISGVGTRNYYRKIGYRLQGPYMVKML 546
RIAREEHGS K+AVISGVGTRNYYRKIGY L+GPYM K L
Sbjct: 723 RIAREEHGSNKIAVISGVGTRNYYRKIGYELEGPYMTKPL 842
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6679891|ref|NP_032086.1| alpha glucosidase 2 alpha
neutral subunit [Mus musculus]
(966 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02103 484 e-137
22798 69 7e-12
21286 59 7e-09
26869 52 1e-06
10523 31 2.8
12065 31 2.8
30930 30 4.9
>02103
Length = 4227
Score = 484 bits (1247), Expect = e-137, Method: Compositional matrix adjust.
Identities = 227/439 (51%), Positives = 302/439 (68%), Gaps = 1/439 (0%)
Frame = -2
Query: 528 SASYPDFTNPRMRAWWSNMFSFDNYEGSAPNLYVWNDMNEPSVFNGPEVTMLKDAVHYGG 587
S+ +PDF +R WW++ FS Y GS NLYVWNDMNEPSVFN PE+TM +D H G
Sbjct: 4226 SSGWPDFLESHVREWWADKFSLSEYVGSDLNLYVWNDMNEPSVFNAPEITMNRDVKHLAG 4047
Query: 588 WEHRDIHNIYGLYVHMATADGLIQRSGGIERPFVLSRAFFSGSQRFGAVWTGDNTAEWDH 647
WE+R++HNIYG++VH AT DGL++R+ ER FVL+RAFFSG+QR AVWTGDN EW H
Sbjct: 4046 WENREVHNIYGMHVHAATMDGLLKRTNYQERAFVLTRAFFSGTQRTSAVWTGDNMGEWSH 3867
Query: 648 LKISIPMCLSLALVGLSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAHLDTGRRE 707
LKIS PM +SL LVG++F GADVGGFF+NP+ EL+ RWYQ GA+QPFFRAHAHLDT RRE
Sbjct: 3866 LKISNPMIMSLNLVGITFSGADVGGFFRNPDNELITRWYQAGAFQPFFRAHAHLDTKRRE 3687
Query: 708 PWLLASQYQDAIRDALFQRYSLLPFWYTLFYQAHKEGFPVMRPLWVQYPEDMSTFSIEDQ 767
P+LL + + IR AL RYS LP+WYT+F + K+G VMRPLWV++P++ +TF I+D
Sbjct: 3686 PYLLPDENVNIIRAALRARYSYLPYWYTVFASSEKDGAAVMRPLWVEFPKERATFGIDDN 3507
Query: 768 FMLGDALLIHPVSDAGAHGVQVYLPGQEEVWYDIQSYQKHHGPQTLYLPVTLSSIPVFQR 827
FM+G +LL+ PV+D GA VY PG +++WYD+++++ + G Q + + LS IPV+QR
Sbjct: 3506 FMVGSSLLVRPVTDQGATNANVYFPGADQIWYDVETHEAYKGQQEVNVAAPLSKIPVYQR 3327
Query: 828 GGTIVPRWMRVRRSSDCMKDDPITLFVALSPQGTAQGELFLDDGHTFNYQTRHEFLLRRF 887
GG+I+PR MR RRSS M DDP+TL VAL + AQG+L++DD H+FNY+ + + +
Sbjct: 3326 GGSIIPRKMRPRRSSSLMFDDPLTLVVALDSKQEAQGQLYVDDYHSFNYKN-GAYGIIDY 3150
Query: 888 XXXXXXXXXXXADPKGHLETPIWIERVVIMGA-GKPAAVVLQTKGSPESRLSFQHDPETS 946
T W+ERVV++G +P V L G + L+F D
Sbjct: 3149 SFTSHKLHSNVKHEGAQFTTKEWLERVVVVGLPHEPRKVTLHKSGQ-TTDLTFTFDSSRK 2973
Query: 947 VLILRKPGVSVASDWSIHL 965
VL +RKPG ++ W+I L
Sbjct: 2972 VLTIRKPGTNILQTWTISL 2916
>22798
Length = 482
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 77/165 (46%), Gaps = 29/165 (17%)
Frame = +2
Query: 529 ASYPDFTNPRMRAWWSNMFSFDNYEGSAPNLYVWNDMNEPSVF----------------- 571
++PDF +P + +W N +Y P +W DMNE S F
Sbjct: 5 TAFPDFFHPNVDQYWYNQMK--SYHDMIPYDGIWLDMNEVSNFIDGSTHGCTKGSLDRPP 178
Query: 572 ------NGPEV---TML---KDAVHYGGWEHRDIHNIYGLYVHMATADGLIQRSGGIERP 619
NG + TM K AV ++ ++HN+YG +T GL + G +R
Sbjct: 179 YVPPTINGKSLYAKTMCPSAKQAVS----DNYNLHNMYGWSEMRSTRAGLTKLFG--KRS 340
Query: 620 FVLSRAFFSGSQRFGAVWTGDNTAEWDHLKISIPMCLSLALVGLS 664
F+LSR+ FSGS FGA WTGD +EW L SIP L+ + G+S
Sbjct: 341 FILSRSTFSGSGHFGAHWTGDIRSEWSDLYYSIPSILNSNMFGMS 475
>21286
Length = 1212
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +3
Query: 391 GPSVFDVFRQYASLTGTQALPPLFSLGYHQSRWNYRDEADVLEVDQGFDDHNMPCDVIWL 450
GPS V QY SL G +PP +SLG+H ++ Y + EV +P DV W
Sbjct: 798 GPSPLQVVEQYVSLIGRPVMPPFWSLGFHLCKYGYGSSKVLSEVIARNRAAKIPYDVQWN 977
Query: 451 DIEHADGKRYFTWDPT-RFPQPLNMLEHLASKRRKLVAIVDPHI 493
DI++ D + +T+D + ++++ L + ++ + I+DP I
Sbjct: 978 DIDYMDAYKDWTYDSNGSYSGLRDIVDDLHAHNQRYIMIIDPGI 1109
>26869
Length = 390
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +3
Query: 731 PFWYTLFYQAHKEGFPVMRPLWVQYPEDMSTFSIEDQFMLGDALLIHPVSDAGAHGVQVY 790
P+ F +A + G PV PLW P D SI D+F+LGD ++ PV GA +Y
Sbjct: 15 PYIMKTFKRAVETGEPVNAPLWWISPNDAIAQSIYDEFLLGDDIIAAPVVVEGATNRDIY 194
Query: 791 LPGQEEVWYDIQSYQKHHGP-QTLYLPVTLSSIPVFQRGG 829
LP E W D + + GP + L+++P F G
Sbjct: 195 LPEGE--WIDGNTNDVYKGPVWIMEYTAPLNTLPYFCEKG 308
>10523
Length = 353
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 120 VADPPTARLSVSGRDDNSVELTV 142
++ PPT LSVS RD+N + LT+
Sbjct: 94 ISSPPTTILSVSSRDENGLGLTI 162
>12065
Length = 1251
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 120 VADPPTARLSVSGRDDNSVELTV 142
++ PPT LSVS RD+N + LT+
Sbjct: 88 ISSPPTTILSVSSRDENGLGLTI 156
>30930
Length = 1452
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
Frame = -3
Query: 294 EGGEPYRLY--NLDVFQYELNNPMALYGSVPVLLAHSFHRDLGIFWLNAAETWVDISSNT 351
EG RL N+DV Q ++ N G V A F + L W + N
Sbjct: 1246 EGAAQLRLTSPNIDVIQLDVTND----GQVEE--ARRFXDE----QLQGYGLWAIV--NN 1103
Query: 352 AGKTLFGKMLDYLQGSGETPQTDIRWMSESGIIDVFLMLGPSVFDVFRQYASLTGTQALP 411
AG TLFG +++ S D+ W+ I FL SV ASL+G ALP
Sbjct: 1102 AG-TLFGAEVEWCSLSRXQRMMDVNWLGTVRITQAFLPYVRSVKGRVINVASLSGRVALP 926
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|112293264|ref|NP_031978.2| protein
disulfide-isomerase A3 [Mus musculus]
(505 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06936 482 e-136
03582 144 6e-52
28335 172 2e-43
35310 103 1e-22
35861 100 3e-21
14392 84 9e-17
18455 82 7e-16
18943 74 2e-13
04510 70 2e-12
30644 52 9e-11
21509 55 7e-08
36159 54 2e-07
07257 46 4e-05
15159 45 8e-05
04779 44 1e-04
01000 44 1e-04
>06936
Length = 2198
Score = 482 bits (1240), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/466 (53%), Positives = 318/466 (68%), Gaps = 5/466 (1%)
Frame = +3
Query: 26 DVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL---KGIVPLAK 82
DVL+L +F+S + LMLVEFFAPWCGHCK+LAP+YE AAT L VPLAK
Sbjct: 147 DVLDLKKSDFQSTIE---KHSLMLVEFFAPWCGHCKKLAPQYELAATALLKNDPPVPLAK 317
Query: 83 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTE 142
VDCT T+ C+KYGVSGYPTLK+FR GE YDGPR DGIV ++ K AGP S L++
Sbjct: 318 VDCTEETDVCSKYGVSGYPTLKVFRGGEVNKDYDGPRDKDGIVKYMAKMAGPTSKELKSV 497
Query: 143 EEFKKFISDKDASVVGFFRDLFSDGHSEFLKAASNLRDNYRFAHTNIESLVKEYDDNGEG 202
EE++KF+S + VVGFF S G ++ LK ++ D RF +T S V E +
Sbjct: 498 EEYEKFLSRDGSCVVGFFTGANS-GMADTLKKVADSEDGLRFGYTT-SSEVLEKAKYKDE 671
Query: 203 ITIFRPLHLANKFEDKTVAYTEKKMTSGKIKKFIQDSIFGLCPHMTEDNKDLIQGKDLLT 262
I +FRP +ANKFED V +T S IKKF+++ FGLC T DN + K ++
Sbjct: 672 IVLFRPQKMANKFEDTAVKFT-GDANSHNIKKFLKEESFGLCALRTMDNAADFK-KPVVI 845
Query: 263 AYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTT-- 320
A++DVDY KNAKGSNYWRNRVM V KK D G K+NFAV+++ F +EL + GL+
Sbjct: 846 AFFDVDYVKNAKGSNYWRNRVMKVGKKLRDEGLKINFAVSNKNEFDNELVECGLKEAVDA 1025
Query: 321 GEVPVVAIRTAKGEKFVMQEEFSRDGKALEQFLQEYFDGNLKRYLKSEPIPESNEGPVKV 380
+ P + K +KF M +EF+ D EQF+++ DG L+ Y+KSEP+P+++E VKV
Sbjct: 1026SDKPAICAYNDKNQKFKMDQEFAMD--TFEQFVRDMLDGKLEAYMKSEPVPDNSENAVKV 1199
Query: 381 VVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAND 440
V NF+++VN+ +KDVLIEFYAPWCGHCK L PKY EL EKL +P IVIAKMDATAND
Sbjct: 1200AVGRNFEELVNDPEKDVLIEFYAPWCGHCKTLAPKYDELAEKLKNEPEIVIAKMDATAND 1379
Query: 441 VPSPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFISYLQREATN 486
VP PY+V+GFPT+YF+P K +PKKYEGGRE+NDF+ YL +EATN
Sbjct: 1380VPPPYDVRGFPTLYFAPKGSKSSPKKYEGGREVNDFVKYLAKEATN 1517
>03582
Length = 1967
Score = 144 bits (364), Expect(2) = 6e-52, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 187/367 (50%), Gaps = 10/367 (2%)
Frame = +3
Query: 129 KKQAGPASVPLRTEEEFKKFISDKDASVVGFFRDLFSDGHSEFLKAASNLRDNYRFAHTN 188
+++ GP + L+ ++E K F + V+GFF+D S+G F +AA+ + D+ F T+
Sbjct: 420 EEKTGPPAEDLKDKDEAKAFAEKDEVVVIGFFKDQKSEGAVAFTEAAAGI-DDIPFGITS 596
Query: 189 IESLVKEYDDNGEGITIFRPLHLANKFEDKTVAYTEKKMTSGKIKKFIQDSIFGLCPHMT 248
ES KEY + +GI + + KF++ + E I K ++D+ L T
Sbjct: 597 DESAFKEYKMDKDGIVLLK------KFDEGRNDF-EGDFEPAAIIKHVRDNQLPLVVEFT 755
Query: 249 EDNKDLIQG---KDLLTAYYDVD-----YEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFA 300
+++ I G K+ + + D EK + ++ +V+ + +LD N
Sbjct: 756 QESAQKIFGGEVKNHILLFLKKDGGEDTIEKFKAAAGDFKGKVLFI---YLDTDDAENGR 926
Query: 301 VASRKTFSHELSDFGLESTTGEVPVV-AIRTAKGEKFVMQEEFSRDGKALEQFLQEYFDG 359
+ FGL+ E+P V I+ A+ E D + +++F+Q++ DG
Sbjct: 927 ITEF---------FGLKDE--EIPAVRLIQLAEDMTKYKPESADLDTETIKKFVQDFLDG 1073
Query: 360 NLKRYLKSEPIPESNEG-PVKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKE 418
L +L SE +P + PVKV+V +NF ++ ++ K V +EFYAPWCGHCK L P + E
Sbjct: 1074KLNAHLMSEDVPSDWDAKPVKVLVGKNFKEVALDKTKGVFVEFYAPWCGHCKQLAPIWDE 1253
Query: 419 LGEKLSKDPNIVIAKMDATANDVPSPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFIS 478
L +K + ++VIAKMD+TAN++ +V+ FPT+ + P + Y G R L+ F+
Sbjct: 1254LADKFTDKADVVIAKMDSTANEI-EEVKVQSFPTLKYFPKDSDEVI-DYNGERTLDAFVK 1427
Query: 479 YLQREAT 485
+++ T
Sbjct: 1428FVESGGT 1448
Score = 78.2 bits (191), Expect(2) = 6e-52, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +2
Query: 27 VLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK---GIVPLAKV 83
V LT +NF+S V + +LVEF+APWCGHCK LAPEY AA LK V LAKV
Sbjct: 119 VYVLTTKNFDSFVKENE---FVLVEFYAPWCGHCKALAPEYAKAAQTLKDENSDVKLAKV 289
Query: 84 DCTANTNTCNKYGVSGYPTLK 104
D T T+ GV GYPTLK
Sbjct: 290 DATIETSLGENMGVRGYPTLK 352
Score = 70.5 bits (171), Expect(2) = 2e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +2
Query: 372 ESNEGPVKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPN--I 429
+ +EG V V+ +NFD V +E++ VL+EFYAPWCGHCK L P+Y + + L KD N +
Sbjct: 104 KQDEG-VYVLTTKNFDSFV-KENEFVLVEFYAPWCGHCKALAPEYAKAAQTL-KDENSDV 274
Query: 430 VIAKMDATA-NDVPSPYEVKGFPTIYFSPANKKL 462
+AK+DAT + V+G+PT+ FS K L
Sbjct: 275 KLAKVDATIETSLGENMGVRGYPTLKFSVMEKIL 376
Score = 23.1 bits (48), Expect(2) = 2e-13, Method: Compositional matrix adjust.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 467 YEGGRELNDFISYLQR 482
Y GGR+ D +S+L++
Sbjct: 379 YSGGRQAADIVSWLKK 426
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +3
Query: 30 LTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL--KGIVPLAKVDCTA 87
L +NF+ D + VEF+APWCGHCK+LAP ++ A + K V +AK+D TA
Sbjct: 1140 LVGKNFKEVALDKTKG--VFVEFYAPWCGHCKQLAPIWDELADKFTDKADVVIAKMDSTA 1313
Query: 88 NTNTCNKYGVSGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLK 129
N + V +PTLK F +D +E Y+G RT D V ++
Sbjct: 1314 --NEIEEVKVQSFPTLKYFPKDSDEVIDYNGERTLDAFVKFVE 1436
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 85 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQ 131
C KYG + IFR+G+++ Y G R A IVS LKK+
Sbjct: 292 CNYRDQLGRKYGCTWISNP*IFRNGKDS-EYSGGRQAADIVSWLKKR 429
>28335
Length = 601
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 95/126 (75%)
Frame = -2
Query: 361 LKRYLKSEPIPESNEGPVKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELG 420
++ YLKS+PIP++ EGPVK V FD IVN KDVLIEFYAPWCGHC+ LEPKY EL
Sbjct: 597 IQPYLKSQPIPQNEEGPVKTAVGRTFDKIVNNPKKDVLIEFYAPWCGHCQQLEPKYNELA 418
Query: 421 EKLSKDPNIVIAKMDATANDVPSPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFISYL 480
L +P+IV AK+DATAND P+PYEVKGFP IYFSP K PKKYEG RE++ + Y+
Sbjct: 417 TLLKDEPDIVXAKIDATANDTPTPYEVKGFPAIYFSPKRFKEFPKKYEGDREVDAMLKYI 238
Query: 481 QREATN 486
REAT+
Sbjct: 237 AREATS 220
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Frame = -2
Query: 48 MLVEFFAPWCGHCKRLAPEYEAAATRLK---GIVPLAKVDCTANTNTCNKYGVSGYPTLK 104
+L+EF+APWCGHC++L P+Y AT LK IV AK+D TAN +T Y V G+P +
Sbjct: 489 VLIEFYAPWCGHCQQLEPKYNELATLLKDEPDIV-XAKIDATAN-DTPTPYEVKGFPAIY 316
Query: 105 IF--RDGEEAGAYDGPRTADGIVSHLKKQA 132
R E Y+G R D ++ ++ ++A
Sbjct: 315 FSPKRFKEFPKKYEGDREVDAMLKYIAREA 226
>35310
Length = 601
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 106/205 (51%), Gaps = 3/205 (1%)
Frame = +3
Query: 139 LRTEEEFKKFISDKDASVVGFFRDLFSDGHSEFLKAASNLRDNYRFAHTNIESLVKE--Y 196
L+ +F F+ SVVG+F+++ F K A D RFA T L++ Y
Sbjct: 3 LKDISDFNAFLDRPGTSVVGYFQNVKGYKARTFQKVADTYGD-LRFAFTTDPDLMQHAGY 179
Query: 197 DDNGEGITIFRPLHLANKFEDKTVAYTEKKMTSGKIKKFIQDSIFGLCPHMTEDNKDLIQ 256
D+ + ++RP +A+KFE+ +V + +++ ++ F+ GLC T N I+
Sbjct: 180 SDD---VVLYRPKVMASKFEESSVVFG-GDLSATTLRFFLDAQKLGLCGLRTPGNA--IK 341
Query: 257 GKD-LLTAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFG 315
K L AYY+VD+E+N S YWRNRVM V KK D G+ +FAV+S+ +L D G
Sbjct: 342 FKTPLFVAYYEVDFERNPSFSTYWRNRVMKVGKKIRDEGNNAHFAVSSKVDLKQDLEDCG 521
Query: 316 LESTTGEVPVVAIRTAKGEKFVMQE 340
L G+ PVV KF M+E
Sbjct: 522 LADYYGDPPVVCAYDQFSRKFKMEE 596
>35861
Length = 850
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +3
Query: 345 DGKALEQFLQEYFDGNLKRYLKSEPIPESNEG-PVKVVVAENFDDIVNEEDKDVLIEFYA 403
D + +F+Q++ DG LK +LKSE +PE + PVKV+V++NF ++ ++ KDV +EFYA
Sbjct: 474 DTATISKFVQDFMDGKLKPHLKSEEVPEDWDAKPVKVLVSKNFKEVALDKSKDVFVEFYA 653
Query: 404 PWCGHCKNLEPKYKELGEKLSKDPNIVIAK 433
PWCGHCK L P + ELGEK ++VIAK
Sbjct: 654 PWCGHCKQLVPIWDELGEKFQDSDDVVIAK 743
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 30 LTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAKVDCTA 87
L +NF+ D + VEF+APWCGHCK+L P ++ + + V +AK
Sbjct: 585 LVSKNFKEVALDKSKD--VFVEFYAPWCGHCKQLVPIWDELGEKFQDSDDVVIAK----- 743
Query: 88 NTNTCNKYGVSGYPTL 103
N + G G+P L
Sbjct: 744 NGLHGQRSGGGGHPEL 791
>14392
Length = 468
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2
Query: 412 LEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVKGFPTIYFSPANKKLTPKKYEGGR 471
L P Y+EL EKL +D ++ I KMDATANDVP + V+GFPT+++ P + K P Y GGR
Sbjct: 2 LTPIYEELAEKL-QDEDVAIVKMDATANDVPPEFNVRGFPTLFWLPKDSKNKPVSYNGGR 178
Query: 472 ELNDFISYLQREAT 485
EL+DFI Y+ +EA+
Sbjct: 179 ELDDFIKYIAKEAS 220
>18455
Length = 499
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Frame = +2
Query: 27 VLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL--KGIVPLAKVD 84
V++LT++ F VS +G V+FFAPWC HC+RLAP +E A L + ++K+D
Sbjct: 146 VVDLTEDTFAKHVS----SGNHFVKFFAPWCSHCQRLAPIWEELAKALIKEPSATISKID 313
Query: 85 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136
CT + C + V GYPTL DG++ Y G R + ++++K G S
Sbjct: 314 CTQYRSICQDFEVKGYPTLLWIEDGKKIEKYAGARDMVTLKTYVEKMIGAPS 469
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Frame = +2
Query: 343 SRDGKALEQFLQEYFDGNLKRYLKSEPIPESNEGPVKVVVAENFDDIVNEE--DKDVLIE 400
+RD A+ F+ + + L + + + ++ P V + +D + + ++
Sbjct: 29 TRDLPAITDFINQELNTPAVEDLSDQQLKDESQNPNVGKVVDLTEDTFAKHVSSGNHFVK 208
Query: 401 FYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-NDVPSPYEVKGFPTIYFSPAN 459
F+APWC HC+ L P ++EL + L K+P+ I+K+D T + +EVKG+PT+ +
Sbjct: 209 FFAPWCSHCQRLAPIWEELAKALIKEPSATISKIDCTQYRSICQDFEVKGYPTLLWIEDG 388
Query: 460 KKLTPKKYEGGRELNDFISYLQR 482
KK+ +KY G R++ +Y+++
Sbjct: 389 KKI--EKYAGARDMVTLKTYVEK 451
>18943
Length = 1035
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Frame = +2
Query: 57 CGHCKRLA----------PEYEAAATRLK------GIVPLAKVDCTANTNTCNKYGVSGY 100
CG C+ L P ++ A+ ++ G V AKVDC ++Y +S Y
Sbjct: 170 CGVCQLLCRLVSLQSDSGPTFDEASRKISEEFTQPGKVLFAKVDCDKEVTIASQYRISKY 349
Query: 101 PTLKIFRDGEEAGA-YDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASVVGF 159
PTLK+FR+G+ + G R+AD + + ++++ + V T ++ ++ + K V+G+
Sbjct: 350 PTLKLFRNGQMVKKEFRGQRSADALAAFIREELKDSVVDHNTLDKLEE-LDTKKRQVIGY 526
Query: 160 FRDLFSDGHSEFLKAASNLRDNYRFAHTNIESLVKEYDDNGEGITIFRPLH 210
F SD + FL+ AS+LRDN F +T + V + G FRP H
Sbjct: 527 FEAKESDNYKTFLRVASSLRDNCIF-NTAVGP-VSASERTGGDYVAFRPPH 673
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 384 ENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSK 425
+N + I++ D V + FYA WC + L P+ + EK K
Sbjct: 138 DNINTIISRNDV-VFVNFYADWCRFSQILAPRLMKPPEKYLK 260
>04510
Length = 685
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +2
Query: 26 DVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL---KGIVPLAK 82
DVL+L +F+S + LMLVEFFAPWCGHCK+LAP+YE AAT L VPLAK
Sbjct: 353 DVLDLKKSDFQSTIEKHS---LMLVEFFAPWCGHCKKLAPQYELAATALLKNDPPVPLAK 523
Query: 83 VDCTANTNTCNK 94
V C K
Sbjct: 524 VVLCLCYYVCLK 559
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 392 EEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSK-DPNIVIAKM 434
E+ +L+EF+APWCGHCK L P+Y+ L K DP + +AK+
Sbjct: 395 EKHSLMLVEFFAPWCGHCKKLAPQYELAATALLKNDPPVPLAKV 526
>30644
Length = 845
Score = 51.6 bits (122), Expect(2) = 9e-11, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = -3
Query: 26 DVLEL-TDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG 76
DV+ + TD+ + SA L++ F+APWCG+CKR+ P++ AAAT +KG
Sbjct: 480 DVVHIDTDDGLTKLLKKDKSAALVM--FYAPWCGYCKRMKPDFAAAATEVKG 331
Score = 32.7 bits (73), Expect(2) = 9e-11, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 13/80 (16%)
Frame = -1
Query: 94 KYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAG-------------PASVPLR 140
+Y ++G+PTL F G+ Y G DGI+S L P+ V
Sbjct: 272 QYNITGFPTLYYFEKGKLKYRYGGENNKDGIISWLSNPKPPEEPKKEAEWSEEPSEVAHL 93
Query: 141 TEEEFKKFISDKDASVVGFF 160
+ F F+ + +V F+
Sbjct: 92 EDSNFDDFLKQHPSVLVMFY 33
Score = 38.9 bits (89), Expect(2) = 1e-04, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -3
Query: 370 IPESNEGPVKVVVAENFDD----IVNEEDKDVLIEFYAPWCGHCKNLEPKY 416
IP + VV + DD ++ ++ L+ FYAPWCG+CK ++P +
Sbjct: 510 IPWDEDPTATDVVHIDTDDGLTKLLKKDKSAALVMFYAPWCGYCKRMKPDF 358
Score = 24.3 bits (51), Expect(2) = 1e-04, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 441 VPSPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFISYL 480
V + Y + GFPT+Y+ K +Y G + IS+L
Sbjct: 281 VQAQYNITGFPTLYYFEKGK--LKYRYGGENNKDGIISWL 168
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = -1
Query: 372 ESNEGPVKVVVAE--NFDDIVNEEDKDVLIEFYAPWCGHCK 410
E +E P +V E NFDD + + VL+ FYAPWCGHCK
Sbjct: 128 EWSEEPSEVAHLEDSNFDDFLKQH-PSVLVMFYAPWCGHCK 9
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1
Query: 26 DVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKR 62
+V L D NF+ + S +LV F+APWCGHCK+
Sbjct: 107 EVAHLEDSNFDDFLKQHPS---VLVMFYAPWCGHCKK 6
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Frame = -3
Query: 67 YEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYP-TLKIFRDGEEAGAYDGPRTADGIV 125
+E A ++G +A V+C + C K VS LK ++DGE YD +V
Sbjct: 717 FEEVAEEMRGKSTMAYVNCGEDKKFCKKLKVSPSSFELKHYKDGEFNKDYDRKLALKSMV 538
Query: 126 SHLKKQAG-------PAS---VPLRTEEEFKKFI-SDKDASVVGFF 160
+ L G P + V + T++ K + DK A++V F+
Sbjct: 537 NFLLXPTGDIPWDEDPTATDVVHIDTDDGLTKLLKKDKSAALVMFY 400
>21509
Length = 754
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Frame = -3
Query: 30 LTDENFESRVSDTGSAGLMLVEFFAP--------WCGHCKRLAPEYEAAATRLKGIVPLA 81
LT + F++ VS S +M A W G C +R K + +A
Sbjct: 713 LTKDTFDTFVSTHSSVLVMFTPHGADIVKNEASVWRGCCHH---------SRAK-LGAVA 564
Query: 82 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP 138
VD T + NKY V GYPTLK F+DG+ A Y G R++D VS +KK ++P
Sbjct: 563 AVDATLDPELGNKYDVKGYPTLKYFKDGKLAFEYSGGRSSDAFVSFMKKAGAGPTLP 393
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = -1
Query: 26 DVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAA 71
DV LTD FES ++ LV F+APWCGHCK++ P Y AAA
Sbjct: 358 DVNHLTDATFESFIAANRRT---LVMFYAPWCGHCKKMKPAYMAAA 230
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1
Query: 394 DKDVLIEFYAPWCGHCKNLEPKY 416
++ L+ FYAPWCGHCK ++P Y
Sbjct: 310 NRRTLVMFYAPWCGHCKKMKPAY 242
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = -3
Query: 373 SNEGPVKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIA 432
S V V+ + DIV E + W G C + K LG +A
Sbjct: 683 STHSSVLVMFTPHGADIVKNEA--------SVWRGCCHHSRAK---LG---------AVA 564
Query: 433 KMDATAN-DVPSPYEVKGFPTI-YFSPANKKLTPKKYEGGRELNDFISYLQREATN 486
+DAT + ++ + Y+VKG+PT+ YF +Y GGR + F+S++++
Sbjct: 563 AVDATLDPELGNKYDVKGYPTLKYFKDGKLAF---EYSGGRSSDAFVSFMKKAGAG 405
>36159
Length = 369
Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -1
Query: 403 APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDA 436
APWCGHCK L P + ELGEK ++VIAKMD+
Sbjct: 102 APWCGHCKQLVPIWDELGEKFQDSDDVVIAKMDS 1
Score = 34.7 bits (78), Expect = 0.097, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 54 APWCGHCKRLAPEYEAAATRLKGI--VPLAKVD 84
APWCGHCK+L P ++ + + V +AK+D
Sbjct: 102 APWCGHCKQLVPIWDELGEKFQDSDDVVIAKMD 4
>07257
Length = 1477
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = -3
Query: 43 GSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPT 102
+A +LV F+APWC C AP Y A A + LA VD +N ++G P
Sbjct: 1304 STADCVLVMFYAPWCHFCANTAPHYNALARAFPQLEVLA-VDTVHFSNLNARFGTVAVPN 1128
Query: 103 LKIFRDGEEAGAYD 116
+ +F A ++
Sbjct: 1127 IMLFHQSRSAVRFN 1086
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 391 NEEDKD-VLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMD 435
N D VL+ FYAPWC C N P Y L P + + +D
Sbjct: 1310 NHSTADCVLVMFYAPWCHFCANTAPHYNALARAF---PQLEVLAVD 1182
>15159
Length = 1945
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +3
Query: 371 PESNEGPVKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIV 430
P G +K+ A++F+ + + + V+++F+A WCG CK + PK + E+ +
Sbjct: 63 PSKKMGVIKISSADDFEKAI-QGGQLVVVDFHATWCGPCKVIAPKLAKWSEEDRFKETVK 239
Query: 431 IAKMDA-TANDVPSPYEVKGFPTIYFSPANKKL 462
I +D D+ + PT +F K+L
Sbjct: 240 IISVDVDELEDLAGEQGISAMPTFFFLEMEKRL 338
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 47 LMLVEFFAPWCGHCKRLAPEYEAAAT--RLKGIVPLAKVDCTANTNTCNKYGVSGYPTL 103
L++V+F A WCG CK +AP+ + R K V + VD + + G+S PT
Sbjct: 135 LVVVDFHATWCGPCKVIAPKLAKWSEEDRFKETVKIISVDVDELEDLAGEQGISAMPTF 311
>04779
Length = 910
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Frame = +1
Query: 74 LKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIF----RDGEEAGAYDGPRTADGIVS--- 126
LKG V +D TA+ N +Y V GYPT+K F +A Y+G RTA I++
Sbjct: 4 LKGKVKFGALDATAHQNKAAEYNVRGYPTIKFFPANSNRASDAQEYNGGRTASDIIAWAS 183
Query: 127 --HLKKQAGPASVPLRTEEEFKKFISDKDASVV 157
H + P + + +E F K VV
Sbjct: 184 DKHTENVPPPELIEITSESTFDSACEGKPLCVV 282
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 429 IVIAKMDATAN-DVPSPYEVKGFPTIYFSPA--NKKLTPKKYEGGRELNDFISYLQREAT 485
+ +DATA+ + + Y V+G+PTI F PA N+ ++Y GGR +D I++ + T
Sbjct: 16 VKFGALDATAHQNKAAEYNVRGYPTIKFFPANSNRASDAQEYNGGRTASDIIAWASDKHT 195
>01000
Length = 1541
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = -1
Query: 83 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT-------ADGIVSH 127
VDCT + TCN + GYPTL +F++G+ + G R+ DG ++H
Sbjct: 1541 VDCTKQSETCNAQSIRGYPTLAVFQNGKRQEDFKGTRSLDDLQEFVDGFLTH 1386
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|20452466|ref|NP_032024.2| ferrochelatase [Mus
musculus]
(422 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08453 255 e-134
16393 29 4.4
>08453
Length = 1559
Score = 255 bits (652), Expect(2) = e-134, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 144/190 (75%)
Frame = +3
Query: 70 ILMLNMGGPETLGEVXXXXXXXXXXXXXMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGS 129
I+MLN+GGPE +V + LP Q+KLAP IAKRRTP I EQY++IGGGS
Sbjct: 3 IMMLNLGGPEKAEDVHDFLLRLFLDKDLIPLPAQSKLAPLIAKRRTPSIIEQYQKIGGGS 182
Query: 130 PIKMWTSKQGEGMVKLLDELSPATAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQ 189
PIK WT QG+ MV +LD++SP TAPHK+YIGFRY HPLTE+ I++ME DG+ERA+AFTQ
Sbjct: 183 PIKRWTELQGQAMVDILDKISPQTAPHKFYIGFRYAHPLTEDTIQQMEEDGVERAVAFTQ 362
Query: 190 YPQYSCSTTGSSLNAIYRYYNEVGQKPTMKWSTIDRWPTHPLLIQCFADHILKELNHFPE 249
YPQYSCSTTGSSLNAIYR+Y + G + WS IDRWPTHP L++ F+++I EL FPE
Sbjct: 363 YPQYSCSTTGSSLNAIYRHYAKHGASNHIVWSVIDRWPTHPGLVKAFSNNIRDELARFPE 542
Query: 250 EKRSEVVILF 259
E R +VVILF
Sbjct: 543 EDRDDVVILF 572
Score = 239 bits (611), Expect(2) = e-134, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 131/164 (79%)
Frame = +2
Query: 258 LFSAHSLPMSVVNRGDPYPQEVGATVHKVMEKLGYPNPYRLVWQSKVGPVPWLGPQTDEA 317
SAHSLP+ VVNRGDPYP EV ATV +VME+LG + YRLVWQSKVGP+PWL PQTD+A
Sbjct: 566 FVSAHSLPLKVVNRGDPYPTEVSATVQRVMEELGNTHAYRLVWQSKVGPLPWLSPQTDDA 745
Query: 318 IKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAQKCGAENIRRAESLNGNPLFS 377
IKGL RG+KN+LLVPIAFTSDHIETLYELD+EY+Q L + G +NIRRA SLN NP+F
Sbjct: 746 IKGLVTRGKKNLLLVPIAFTSDHIETLYELDLEYAQHLGAEVGVKNIRRAASLNDNPVFL 925
Query: 378 KALADLVHSHIQSNKLCSTQLSLNCPLCVNPVCRKTKSFFTSQQ 421
+ALAD+V +H+ + ++CS QL+L CP+C N C K FF SQQ
Sbjct: 926 EALADIVKTHLDAGRVCSPQLTLRCPMCTNLTCGMAKEFFASQQ 1057
>16393
Length = 2131
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Frame = +3
Query: 313 QTDEAIKGLCER-GRKNILLVPIAFTSDHIETLYELDI----------EYSQVLAQKCGA 361
+ D G C + G N V I +T + I + Y DI E ++L Q+ A
Sbjct: 1077 ENDNENGGSCSQAGDDN---VDIMWTENTIFSNYTNDIFLEKDIXNRHEVDKIL-QETTA 1244
Query: 362 ENIRRAESLNGNPLFSKAL----ADLVHSHIQS----------NKLCSTQLSLNCPLCVN 407
NI +NGNPL S AL D++HS IQ+ N++ Q N + V+
Sbjct: 1245 FNIN---DVNGNPLLSDALPVQNGDIIHS-IQTSISDNSDTSENEITHPQWQSNTQMNVD 1412
Query: 408 PVCRKTKSFFTSQ 420
+ + S F+S+
Sbjct: 1413 DILAEVNSHFSSR 1451
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|22165384|ref|NP_666228.1| tubulin, beta 2C [Mus
musculus]
(445 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
16482 473 e-134
13181 464 e-131
04882 441 e-124
00276 274 7e-74
28905 260 2e-70
31457 250 1e-66
25015 246 1e-65
39157 233 4e-65
12457 209 2e-54
05902 155 4e-38
06360 137 1e-32
03702 120 9e-28
17215 81 8e-16
19746 40 0.002
29025 36 0.040
>16482
Length = 837
Score = 473 bits (1216), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/246 (91%), Positives = 227/246 (92%)
Frame = +1
Query: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 279
Query: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 280 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 459
Query: 121 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 180
RKEAESCDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 460 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 639
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 640 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 819
Query: 241 RFPGQL 246
RFPGQL
Sbjct: 820 RFPGQL 837
>13181
Length = 1092
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 218/220 (99%), Positives = 220/220 (100%)
Frame = -3
Query: 208 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 268 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 327
PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATF+GNSTAIQELFKRISEQFTA
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFVGNSTAIQELFKRISEQFTA 551
Query: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 550 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 431
>04882
Length = 1136
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/209 (99%), Positives = 209/209 (100%)
Frame = +2
Query: 219 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 278
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS
Sbjct: 320 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 499
Query: 279 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNS 338
QQYRALTVPELTQQMFD+KNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNS
Sbjct: 500 QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS 679
Query: 339 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398
SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY
Sbjct: 680 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 859
Query: 399 TGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
TGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 860 TGEGMDEMEFTEAESNMNDLVSEYQQYQD 946
>00276
Length = 1330
Score = 274 bits (700), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 203/355 (57%), Gaps = 8/355 (2%)
Frame = -3
Query: 78 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXX 137
+G + Q+ P+ V G+ A NN+A+GHYT G ELVD VLD +RK A+ C LQGF
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 138 XXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTD 197
++ +Y + F + P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 198 ETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNM 257
+ +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 258 VPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVF 317
VP+PR+HF + +AP+ S + L V E+T F+ N + CDPRHG+Y+ ++
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIG 369
RG + K+V+ + ++ K + FV+W P K + PP ++ + +
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 267
>28905
Length = 425
Score = 260 bits (664), Expect(2) = 2e-70, Method: Compositional matrix adjust.
Identities = 124/129 (96%), Positives = 126/129 (97%), Gaps = 1/129 (0%)
Frame = -1
Query: 253 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 312
+AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 389 VAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 210
Query: 313 VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372
VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS TFIGNST
Sbjct: 209 VAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSGTFIGNST 30
Query: 373 AIQ-ELFKR 380
AIQ LFKR
Sbjct: 29 AIQGRLFKR 3
Score = 23.9 bits (50), Expect(2) = 2e-70, Method: Composition-based stats.
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 242 FPGQLNADL 250
FPGQLNADL
Sbjct: 424 FPGQLNADL 398
>31457
Length = 1530
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/119 (97%), Positives = 119/119 (100%)
Frame = +3
Query: 309 RYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
+YLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFI
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI 413
Query: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 414 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 590
>25015
Length = 458
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 115/115 (100%), Positives = 115/115 (100%)
Frame = -3
Query: 20 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 79
FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG
Sbjct: 363 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 184
Query: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 134
PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 183 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 19
>39157
Length = 488
Score = 233 bits (593), Expect(2) = 4e-65, Method: Compositional matrix adjust.
Identities = 115/127 (90%), Positives = 118/127 (92%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 264
Query: 61 PRAVLVDLEPGTMDSVRSG-PFG-QIFRPDNFVFGQSGAGNNWAKGHYTE-GAELVDSVL 117
PRAVLVDLEPGTMDSVRSG PFG +IFRPDNFVFGQSGAGNNW + T+ GAELVDSVL
Sbjct: 263 PRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDSVL 84
Query: 118 DVVRKEA 124
DVVRK
Sbjct: 83 DVVRKRG 63
Score = 33.9 bits (76), Expect(2) = 4e-65, Method: Compositional matrix adjust.
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 122 KEAESCDCLQGFQ 134
KEAESCDCLQGFQ
Sbjct: 70 KEAESCDCLQGFQ 32
>12457
Length = 781
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 141/239 (58%)
Frame = -1
Query: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
LVDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK A
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 125 ESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
+ C LQGF ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 185 ATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPG 244
+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 245 QLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAAC 303
LN DL + N+VP+PR+HF + +AP+ S + LTV E+T F+ N M C
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKC 2
>05902
Length = 1127
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 158/282 (56%), Gaps = 12/282 (4%)
Frame = +2
Query: 154 KIREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 212
K+ + +P +++ T+SV P+ ++SD VV+PYN+ L++ +L +N D +DN AL I
Sbjct: 74 KLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAA 253
Query: 213 RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 272
L + TPT+ +N LVS MS TT LR+PG +N DL L +++P PRLHF M G+ P
Sbjct: 254 DRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTP 433
Query: 273 LTSRGS-QQYRALTVPELTQQMFDAKNMMAACDPRHGR----YLTVAAVFRGRMSMKEVD 327
LT+ R TV ++ +++ KNMM + P H + Y+++ + +G + +V
Sbjct: 434 LTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQVH 610
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSATFIGNSTAIQELFKRISEQ 384
+ + ++ + + F+ W P +++ A+ P ++S + N T+I LF+RI Q
Sbjct: 611 KSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSISHLFERILRQ 790
Query: 385 FTAMFRRKAFLHWYTGEGM--DEM-EFTEAESNMNDLVSEYQ 423
+ + +R+AF+ + E + D + EF + + LV EYQ
Sbjct: 791 YDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>06360
Length = 1896
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Frame = -1
Query: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 59 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 119 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSD 177
+RK A+ C LQGF ++ +Y + F++ P+P+VSD
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSD 1174
>03702
Length = 1932
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Frame = +1
Query: 167 FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLN 226
F++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P Y +LN
Sbjct: 1501 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPXYTNLN 1680
Query: 227 HLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG-FAPLTSRGSQQYRALT 285
L+ +S +T LRF G LN DL + N+VP P H PG P+ S + LT
Sbjct: 1681 RLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCPVISAEKAYHEQLT 1854
Query: 286 VPELTQQMFDAKNMMAACDP 305
V E+T F+ N + CDP
Sbjct: 1855 VAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +3
Query: 316 VFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATF 367
++RG + K+V+ + ++ K + FV+W P K + PP ++ +
Sbjct: 6 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 185
Query: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 186 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 356
>19746
Length = 446
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +1
Query: 337 NSSYFVEWIPNNVKTAVCDIPPR--GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAF 394
+ S F W N+ V + P + SAT + NS + I E+ MF +A+
Sbjct: 49 DPSLFTLWTCPNMAFNVSNQPRAFCAYEKSATLVSNSRSSTRPLDDIMEKAWKMFASRAY 228
Query: 395 LHWYTGEGMDEMEFTEAESNMNDLVSEY 422
+H Y G+ E +F +A + +V+ Y
Sbjct: 229 IHQYVKRGLSEEDFLDAFVTLEQVVASY 312
>29025
Length = 395
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 412 ESNMNDLVSEYQQYQD 427
ESNMNDLVSEYQQYQD
Sbjct: 354 ESNMNDLVSEYQQYQD 307
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|21746161|ref|NP_076205.1| tubulin, beta [Mus
musculus]
(445 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13181 469 e-133
16482 467 e-132
04882 449 e-126
00276 273 7e-74
28905 259 3e-70
31457 255 2e-68
25015 242 3e-64
39157 228 2e-63
12457 208 3e-54
05902 156 2e-38
06360 134 6e-32
03702 121 7e-28
17215 82 6e-16
29025 42 7e-04
19746 39 0.005
>13181
Length = 1092
Score = 469 bits (1208), Expect = e-133, Method: Compositional matrix adjust.
Identities = 220/223 (98%), Positives = 223/223 (100%)
Frame = -3
Query: 208 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 268 PGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 327
PGFAPLTSRGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATF+GNSTAIQELFKRISEQFTA
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFVGNSTAIQELFKRISEQFTA 551
Query: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 550 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 422
>16482
Length = 837
Score = 467 bits (1201), Expect = e-132, Method: Compositional matrix adjust.
Identities = 221/246 (89%), Positives = 226/246 (91%)
Frame = +1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 279
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 280 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 459
Query: 121 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKE+ESCDCLQGFQ KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 460 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 639
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 640 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 819
Query: 241 RFPGQL 246
RFPGQL
Sbjct: 820 RFPGQL 837
>04882
Length = 1136
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/212 (100%), Positives = 212/212 (100%)
Frame = +2
Query: 219 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 278
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS
Sbjct: 320 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 499
Query: 279 QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS 338
QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS
Sbjct: 500 QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS 679
Query: 339 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398
SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY
Sbjct: 680 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 859
Query: 399 TGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
TGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 860 TGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 955
>00276
Length = 1330
Score = 273 bits (699), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 203/355 (57%), Gaps = 8/355 (2%)
Frame = -3
Query: 78 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXX 137
+G + Q+ P+ V G+ A NN+A+GHYT G ELVD VLD +RK ++ C LQGF
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 138 XXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTD 197
++ +Y + F + P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 198 ETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNM 257
+ +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 258 VPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIF 317
VP+PR+HF + +AP+ S + L V E+T F+ N + CDPRHG+Y+ ++
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIG 369
RG + K+V+ + ++ K + FV+W P K + PP ++ + +
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 267
>28905
Length = 425
Score = 259 bits (663), Expect(2) = 3e-70, Method: Compositional matrix adjust.
Identities = 123/129 (95%), Positives = 126/129 (97%), Gaps = 1/129 (0%)
Frame = -1
Query: 253 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLT 312
+AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLT
Sbjct: 389 VAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 210
Query: 313 VAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372
VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS TFIGNST
Sbjct: 209 VAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSGTFIGNST 30
Query: 373 AIQ-ELFKR 380
AIQ LFKR
Sbjct: 29 AIQGRLFKR 3
Score = 23.9 bits (50), Expect(2) = 3e-70, Method: Composition-based stats.
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 242 FPGQLNADL 250
FPGQLNADL
Sbjct: 424 FPGQLNADL 398
>31457
Length = 1530
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/122 (97%), Positives = 122/122 (100%)
Frame = +3
Query: 309 RYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
+YLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFI
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI 413
Query: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
Sbjct: 414 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 593
Query: 429 TA 430
TA
Sbjct: 594 TA 599
>25015
Length = 458
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 111/115 (96%), Positives = 114/115 (99%)
Frame = -3
Query: 20 FWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSG 79
FWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYVPRA+LVDLEPGTMDSVRSG
Sbjct: 363 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 184
Query: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 134
PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ
Sbjct: 183 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 19
>39157
Length = 488
Score = 228 bits (581), Expect(2) = 2e-63, Method: Compositional matrix adjust.
Identities = 111/127 (87%), Positives = 117/127 (92%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 264
Query: 61 PRAILVDLEPGTMDSVRSG-PFG-QIFRPDNFVFGQSGAGNNWAKGHYTE-GAELVDSVL 117
PRA+LVDLEPGTMDSVRSG PFG +IFRPDNFVFGQSGAGNNW + T+ GAELVDSVL
Sbjct: 263 PRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDSVL 84
Query: 118 DVVRKES 124
DVVRK
Sbjct: 83 DVVRKRG 63
Score = 32.7 bits (73), Expect(2) = 2e-63, Method: Compositional matrix adjust.
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 122 KESESCDCLQGFQ 134
KE+ESCDCLQGFQ
Sbjct: 70 KEAESCDCLQGFQ 32
>12457
Length = 781
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 141/239 (58%)
Frame = -1
Query: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 124
LVDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK +
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 125 ESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVMPSPKVSDTVVEPYN 184
+ C LQGF ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 185 ATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPG 244
+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 245 QLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAAC 303
LN DL + N+VP+PR+HF + +AP+ S + LTV E+T F+ N M C
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKC 2
>05902
Length = 1127
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 158/282 (56%), Gaps = 12/282 (4%)
Frame = +2
Query: 154 KIREEYPDRIMNTFSVMPS-PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 212
K+ + +P +++ T+SV P+ ++SD VV+PYN+ L++ +L +N D +DN AL I
Sbjct: 74 KLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAA 253
Query: 213 RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 272
L + TPT+ +N LVS MS TT LR+PG +N DL L +++P PRLHF M G+ P
Sbjct: 254 DRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTP 433
Query: 273 LTSRGS-QQYRALTVPELTQQMFDSKNMMAACDPRHGR----YLTVAAIFRGRMSMKEVD 327
LT+ R TV ++ +++ KNMM + P H + Y+++ I +G + +V
Sbjct: 434 LTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQVH 610
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSATFIGNSTAIQELFKRISEQ 384
+ + ++ + + F+ W P +++ A+ P ++S + N T+I LF+RI Q
Sbjct: 611 KSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSISHLFERILRQ 790
Query: 385 FTAMFRRKAFLHWYTGEGM--DEM-EFTEAESNMNDLVSEYQ 423
+ + +R+AF+ + E + D + EF + + LV EYQ
Sbjct: 791 YDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>06360
Length = 1896
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 98/179 (54%), Gaps = 2/179 (1%)
Frame = -1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E K
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 119 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVMPSPKVSD 177
+RK ++ C LQGF ++ +Y + F++ P+P+VSD
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSD 1174
>03702
Length = 1932
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Frame = +1
Query: 167 FSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLN 226
F++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P Y +LN
Sbjct: 1501 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPXYTNLN 1680
Query: 227 HLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG-FAPLTSRGSQQYRALT 285
L+ +S +T LRF G LN DL + N+VP P H PG P+ S + LT
Sbjct: 1681 RLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCPVISAEKAYHEQLT 1854
Query: 286 VPELTQQMFDSKNMMAACDP 305
V E+T F+ N + CDP
Sbjct: 1855 VAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +3
Query: 316 IFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATF 367
++RG + K+V+ + ++ K + FV+W P K + PP ++ +
Sbjct: 6 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 185
Query: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 186 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 356
>29025
Length = 395
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 412 ESNMNDLVSEYQQYQDATA 430
ESNMNDLVSEYQQYQDATA
Sbjct: 354 ESNMNDLVSEYQQYQDATA 298
>19746
Length = 446
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 339 SYFVEWIPNNVKTAVCDIPPR--GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 396
S F W N+ V + P + SAT + NS + I E+ MF +A++H
Sbjct: 55 SLFTLWTCPNMAFNVSNQPRAFCAYEKSATLVSNSRSSTRPLDDIMEKAWKMFASRAYIH 234
Query: 397 WYTGEGMDEMEFTEAESNMNDLVSEY 422
Y G+ E +F +A + +V+ Y
Sbjct: 235 QYVKRGLSEEDFLDAFVTLEQVVASY 312
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|33859488|ref|NP_033476.1| tubulin, beta 2 [Mus
musculus]
(445 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13181 470 e-133
16482 462 e-130
04882 449 e-126
00276 274 6e-74
28905 259 3e-70
31457 255 2e-68
25015 240 8e-64
39157 226 7e-63
12457 209 3e-54
05902 155 3e-38
06360 135 3e-32
03702 121 6e-28
17215 82 6e-16
29025 42 7e-04
19746 39 0.005
>13181
Length = 1092
Score = 470 bits (1209), Expect = e-133, Method: Compositional matrix adjust.
Identities = 220/223 (98%), Positives = 223/223 (100%)
Frame = -3
Query: 208 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 268 PGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVD 327
PGFAPLTSRGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATF+GNSTAIQELFKRISEQFTA
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFVGNSTAIQELFKRISEQFTA 551
Query: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 550 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 422
>16482
Length = 837
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/246 (89%), Positives = 224/246 (91%)
Frame = +1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYV
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 279
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 280 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 459
Query: 121 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVMPSPKVSDTVV 180
RKE+ESCDCLQGFQ KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 460 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 639
Query: 181 EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETY IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 640 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 819
Query: 241 RFPGQL 246
RFPGQL
Sbjct: 820 RFPGQL 837
>04882
Length = 1136
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/212 (100%), Positives = 212/212 (100%)
Frame = +2
Query: 219 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 278
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS
Sbjct: 320 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 499
Query: 279 QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS 338
QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS
Sbjct: 500 QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS 679
Query: 339 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398
SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY
Sbjct: 680 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 859
Query: 399 TGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
TGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 860 TGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 955
>00276
Length = 1330
Score = 274 bits (700), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 203/355 (57%), Gaps = 8/355 (2%)
Frame = -3
Query: 78 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXX 137
+G + Q+ P+ V G+ A NN+A+GHYT G ELVD VLD +RK ++ C LQGF
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 138 XXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTD 197
++ +Y + F + P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 198 ETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNM 257
+ +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 258 VPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIF 317
VP+PR+HF + +AP+ S + L V E+T F+ N + CDPRHG+Y+ ++
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIG 369
RG + K+V+ + ++ K + FV+W P K + PP ++ + +
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 267
>28905
Length = 425
Score = 259 bits (663), Expect(2) = 3e-70, Method: Compositional matrix adjust.
Identities = 123/129 (95%), Positives = 126/129 (97%), Gaps = 1/129 (0%)
Frame = -1
Query: 253 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLT 312
+AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLT
Sbjct: 389 VAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 210
Query: 313 VAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372
VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS TFIGNST
Sbjct: 209 VAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSGTFIGNST 30
Query: 373 AIQ-ELFKR 380
AIQ LFKR
Sbjct: 29 AIQGRLFKR 3
Score = 23.9 bits (50), Expect(2) = 3e-70, Method: Composition-based stats.
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 242 FPGQLNADL 250
FPGQLNADL
Sbjct: 424 FPGQLNADL 398
>31457
Length = 1530
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/122 (97%), Positives = 122/122 (100%)
Frame = +3
Query: 309 RYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
+YLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFI
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI 413
Query: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
Sbjct: 414 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 593
Query: 429 TA 430
TA
Sbjct: 594 TA 599
>25015
Length = 458
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 110/115 (95%), Positives = 113/115 (98%)
Frame = -3
Query: 20 FWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSG 79
FWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYVPRA+LVDLEPGTMDSVRSG
Sbjct: 363 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 184
Query: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 134
PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ
Sbjct: 183 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 19
>39157
Length = 488
Score = 226 bits (576), Expect(2) = 7e-63, Method: Compositional matrix adjust.
Identities = 110/127 (86%), Positives = 116/127 (91%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYV
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 264
Query: 61 PRAILVDLEPGTMDSVRSG-PFG-QIFRPDNFVFGQSGAGNNWAKGHYTE-GAELVDSVL 117
PRA+LVDLEPGTMDSVRSG PFG +IFRPDNFVFGQSGAGNNW + T+ GAELVDSVL
Sbjct: 263 PRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDSVL 84
Query: 118 DVVRKES 124
DVVRK
Sbjct: 83 DVVRKRG 63
Score = 32.7 bits (73), Expect(2) = 7e-63, Method: Compositional matrix adjust.
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 122 KESESCDCLQGFQ 134
KE+ESCDCLQGFQ
Sbjct: 70 KEAESCDCLQGFQ 32
>12457
Length = 781
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 141/239 (58%)
Frame = -1
Query: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 124
LVDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK +
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 125 ESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVMPSPKVSDTVVEPYN 184
+ C LQGF ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 185 ATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPG 244
+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 245 QLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAAC 303
LN DL + N+VP+PR+HF + +AP+ S + LTV E+T F+ N M C
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKC 2
>05902
Length = 1127
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 158/282 (56%), Gaps = 12/282 (4%)
Frame = +2
Query: 154 KIREEYPDRIMNTFSVMPS-PKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICF 212
K+ + +P +++ T+SV P+ ++SD VV+PYN+ L++ +L +N D +DN AL I
Sbjct: 74 KLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAA 253
Query: 213 RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 272
L + TPT+ +N LVS MS TT LR+PG +N DL L +++P PRLHF M G+ P
Sbjct: 254 DRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTP 433
Query: 273 LTSRGS-QQYRALTVPELTQQMFDSKNMMAACDPRHGR----YLTVAAIFRGRMSMKEVD 327
LT+ R TV ++ +++ KNMM + P H + Y+++ I +G + +V
Sbjct: 434 LTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQVH 610
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSATFIGNSTAIQELFKRISEQ 384
+ + ++ + + F+ W P +++ A+ P ++S + N T+I LF+RI Q
Sbjct: 611 KSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSISHLFERILRQ 790
Query: 385 FTAMFRRKAFLHWYTGEGM--DEM-EFTEAESNMNDLVSEYQ 423
+ + +R+AF+ + E + D + EF + + LV EYQ
Sbjct: 791 YDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>06360
Length = 1896
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 98/179 (54%), Gaps = 2/179 (1%)
Frame = -1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEAAGNK 58
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E K
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 119 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVMPSPKVSD 177
+RK ++ C LQGF ++ +Y + F++ P+P+VSD
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSD 1174
>03702
Length = 1932
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Frame = +1
Query: 167 FSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLN 226
F++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P Y +LN
Sbjct: 1501 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPXYTNLN 1680
Query: 227 HLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG-FAPLTSRGSQQYRALT 285
L+ +S +T LRF G LN DL + N+VP P H PG P+ S + LT
Sbjct: 1681 RLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCPVISAEKAYHEQLT 1854
Query: 286 VPELTQQMFDSKNMMAACDP 305
V E+T F+ N + CDP
Sbjct: 1855 VAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +3
Query: 316 IFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATF 367
++RG + K+V+ + ++ K + FV+W P K + PP ++ +
Sbjct: 6 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 185
Query: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 186 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 356
>29025
Length = 395
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 412 ESNMNDLVSEYQQYQDATA 430
ESNMNDLVSEYQQYQDATA
Sbjct: 354 ESNMNDLVSEYQQYQDATA 298
>19746
Length = 446
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 339 SYFVEWIPNNVKTAVCDIPPR--GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 396
S F W N+ V + P + SAT + NS + I E+ MF +A++H
Sbjct: 55 SLFTLWTCPNMAFNVSNQPRAFCAYEKSATLVSNSRSSTRPLDDIMEKAWKMFASRAYIH 234
Query: 397 WYTGEGMDEMEFTEAESNMNDLVSEY 422
Y G+ E +F +A + +V+ Y
Sbjct: 235 QYVKRGLSEEDFLDAFVTLEQVVASY 312
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|61098092|ref|NP_057870.2| S-adenosylhomocysteine
hydrolase [Mus musculus]
(432 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
18254 466 e-133
07987 177 7e-45
18314 151 5e-37
35116 30 1.3
08858 30 2.5
29384 28 5.2
>18254
Length = 928
Score = 466 bits (1198), Expect(2) = e-133, Method: Compositional matrix adjust.
Identities = 221/291 (75%), Positives = 249/291 (85%)
Frame = +3
Query: 124 PLNMILDDGGDLTNLIHTKYPQLLSGIRGISEETTTGVHNLYNMMSNGILKVPAINVNDS 183
PLNMILDDGGDLTNL+H KYPQ L+GI+G+SEETTTGVHNLY MM+ LKVPAINVNDS
Sbjct: 51 PLNMILDDGGDLTNLVHEKYPQYLAGIKGLSEETTTGVHNLYRMMAEKKLKVPAINVNDS 230
Query: 184 VTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITE 243
VTKSKFDNLYGCRESL+DGIKRATDVM+AGKVAVVAGYGDVGKGCAQALR FGARVIITE
Sbjct: 231 VTKSKFDNLYGCRESLVDGIKRATDVMLAGKVAVVAGYGDVGKGCAQALRAFGARVIITE 410
Query: 244 IDPINALQAAMEGYEVTTMDEACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFD 303
IDPINALQAAMEGYEV+T+D++ E IFVT TGC I+ +HFE M +D I+CNIGHFD
Sbjct: 411 IDPINALQAAMEGYEVSTIDDSLSEARIFVTATGCKGILRPKHFENMLEDTIICNIGHFD 590
Query: 304 VEIDVKWLNENAVEKVNIKPQVDRYWLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFT 363
EID+ WLN+N K ++PQV+RY +K+GR +I+LAEGRLVNLGCA GHPSFVMSNSFT
Sbjct: 591 CEIDIAWLNDNCRSKEVVQPQVERYTMKSGRHLIVLAEGRLVNLGCAHGHPSFVMSNSFT 770
Query: 364 NQVMAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQA 414
NQV+AQIELWT +Y +GVH LPKKLDE VA HL L VKLTKL + QA
Sbjct: 771 NQVLAQIELWTKTSQYVLGVHMLPKKLDEEVAALHLSHLGVKLTKLDDDQA 923
Score = 29.6 bits (65), Expect(2) = e-133, Method: Compositional matrix adjust.
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 109 EYLWCIEQTLHFK 121
EYLWCIEQTL FK
Sbjct: 4 EYLWCIEQTLVFK 42
>07987
Length = 1227
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/126 (66%), Positives = 99/126 (78%)
Frame = -2
Query: 307 DVKWLNENAVEKVNIKPQVDRYWLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQV 366
D+ W ++ V ++PQV+RY +K+GR +I+LAEGRLVNLGCA GHPSFVMSNSFTNQV
Sbjct: 1157 DLTW-RPRSI*PVVVQPQVERYTMKSGRHLIVLAEGRLVNLGCAHGHPSFVMSNSFTNQV 981
Query: 367 MAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFK 426
+AQIELWT +Y +GVH LPKKLDE VA HL L VKLTKL + QA YLG+P GPFK
Sbjct: 980 LAQIELWTKTSQYVLGVHMLPKKLDEEVAALHLSHLGVKLTKLDDDQATYLGIPAAGPFK 801
Query: 427 PDHYRY 432
PDHYRY
Sbjct: 800 PDHYRY 783
>18314
Length = 475
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 94/127 (74%)
Frame = -3
Query: 16 AWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVR 75
A+GR+ ++IAE EMPGLM +R+ KPL GA+I GC H+T +TAVL+ETLVALGA VR
Sbjct: 383 AFGRREIEIAEQEMPGLMALRKRAEGDKPLHGAKIIGCTHITAQTAVLVETLVALGATVR 204
Query: 76 WSSCNIFSTQDHXXXXXXXXGIPVFAWKGETDEEYLWCIEQTLHFKDGPLNMILDDGGDL 135
W++CNI+STQ+ GI +FAWKGET+E++ WCI++ ++ + NMILDDGGD
Sbjct: 203 WAACNIYSTQNEVAAALAESGICIFAWKGETEEDFWWCIDRCINAEGWQPNMILDDGGDA 24
Query: 136 TNLIHTK 142
T+L+ K
Sbjct: 23 THLMLKK 3
>35116
Length = 181
Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 362 FTNQVMAQIELWTHPDKYPVGVHFLP 387
F Q++ + W+H D P+ +H+LP
Sbjct: 52 FYTQLLIHTQPWSHCDGLPISLHYLP 129
>08858
Length = 1230
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -2
Query: 330 LKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTH 375
LK G I+ + R L P F N F+ V AQ+ WTH
Sbjct: 731 LKGGYSILQIWSARQATLNKIGS*PKFAPDNFFSVFVSAQLRWWTH 594
>29384
Length = 672
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -1
Query: 35 MREMYSASKPLKGARIAGCLHMTVE 59
+R MYS + P+ GARIAGC+ T E
Sbjct: 156 IRPMYS-NPPIHGARIAGCILNTPE 85
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6671565|ref|NP_031486.1| adaptor-related protein
complex 3, delta 1 subunit [Mus musculus]
(1199 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02203 472 e-133
32748 274 1e-73
09774 127 1e-55
12864 141 2e-33
>02203
Length = 1671
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/475 (53%), Positives = 312/475 (65%), Gaps = 9/475 (1%)
Frame = +1
Query: 353 DESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQHI 412
DESIRLRALDLLYGMV+KKNLMEIVKKLM H+DKAEG+ YRDELL+KII ICSQSNYQ +
Sbjct: 1 DESIRLRALDLLYGMVTKKNLMEIVKKLMVHMDKAEGSHYRDELLSKIIVICSQSNYQFV 180
Query: 413 TNFEWYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMSSLLDSAHLVASS 472
TNFEWY+SILVELTR+EGTRHG +IAAQMLDVAIRV+AIR FAVSQM+ LL+++HL+A++
Sbjct: 181 TNFEWYVSILVELTRMEGTRHGGMIAAQMLDVAIRVQAIRHFAVSQMAILLENSHLLANN 360
Query: 473 TQRNGICEVLYAAAWICGEFSEHLQGPQQTLEAMLRPKVTTLPGHIQAVYVQNVVKLYAS 532
+QRNGICEVLYAAAWICGEFSEHL+ PQQTLEAMLRPK+T+LPGHIQ+V+VQN++KLY
Sbjct: 361 SQRNGICEVLYAAAWICGEFSEHLKEPQQTLEAMLRPKLTSLPGHIQSVFVQNLLKLYCK 540
Query: 533 ILQQKEQAADTEAAQEVTQLLVERLPQFVQSADLEVQERASCILQLVKHVQKLQAKGVPV 592
++++ E D E +V L E+LP FVQS DLEVQERA +L LVK+V K++ KGV V
Sbjct: 541 VVRRLEDEDDQEGINQVHTTLQEKLPVFVQSGDLEVQERACSMLGLVKYVIKIREKGVTV 720
Query: 593 AEEVSALFAGELNPVAPKAQKKVPVPEGLDLDAWINXXXXXXXXXXXXXXAIFH----EE 648
+E+++L+AGELNPVA KAQ+KVPVPEGLDLDAWIN F +
Sbjct: 721 GDELASLYAGELNPVATKAQRKVPVPEGLDLDAWINQPESDSSDEEEAMGVGFFSSVXSD 900
Query: 649 EPRHTXXXXXXX-----XXXXXXXXXXXXXXXXXNNPFYIKSSPSPQKRYQDAPGVEHIP 703
E R +NP Y+K S +K + + V IP
Sbjct: 901 EHRSAYQLEPSKQVPEPTAEELEKRREARRTEQEHNPHYLKDDGSRKKSKRSSNDVSVIP 1080
Query: 704 VVQIDLSVPLKVPGMPMSDQYVKXXXXXXXXXXXXXXXXXXXXXXXXXXHSSLPTESDED 763
V IDLSVPL VPG+ SD+Y++ +E + +
Sbjct: 1081VTPIDLSVPLHVPGLSSSDKYMQLDNQKDSGRGRKEGKSRKKGKKKRRKGKESESEEEVE 1260
Query: 764 IAPAQRVDIITEEMPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPVQKHR 818
A + + E A EDD D DPY+ LDI+LD PL D E +PV HR
Sbjct: 1261QMHAVSTVLDAPDGVEGA-SDKEDDGDNKDPYKMLDINLDAPLRDDETIPVPTHR 1422
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +3
Query: 484 AAAWICGEFSEHLQGPQQTLEAMLRPKVTTLPGHIQAVYVQNVVKLYASILQQKEQAADT 543
+WICGEFSEHL+ PQQTLEAMLRPK+T+LPGHIQ+V+VQN++KLY ++++ E D
Sbjct: 1458 GCSWICGEFSEHLKEPQQTLEAMLRPKLTSLPGHIQSVFVQNLLKLYCKVVRRLEDEDDQ 1637
Query: 544 EAAQEV 549
E +V
Sbjct: 1638 EGINQV 1655
>32748
Length = 429
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/138 (94%), Positives = 137/138 (99%)
Frame = -3
Query: 187 RLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFG 246
R KEKLEDPDPGVQSAAVNVICELAR+NPKNYLSLAPLFFKLMT+STNNWVLIKIIKLFG
Sbjct: 415 RXKEKLEDPDPGVQSAAVNVICELARKNPKNYLSLAPLFFKLMTTSTNNWVLIKIIKLFG 236
Query: 247 ALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQ 306
ALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYEC+NTVIAVL+S+SSG+PNHSASIQLCVQ
Sbjct: 235 ALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECINTVIAVLVSISSGIPNHSASIQLCVQ 56
Query: 307 KLRILIEDSDQNLKYLGL 324
KLRILIEDSDQNLKYLGL
Sbjct: 55 KLRILIEDSDQNLKYLGL 2
>09774
Length = 1829
Score = 127 bits (319), Expect(2) = 1e-55, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 81/117 (69%)
Frame = +2
Query: 965 MSSYCLLAESPYIKVTYDIQASLQKDSQVTVSIILENQSSSFLKNMELNVLDSLNTKMTR 1024
MSSY LLA++ +K+TY+++ + Q+ +QV VSI+ N S LK++E NVLD+LNTK+ R
Sbjct: 1082 MSSYKLLADNASVKLTYEVRINHQRSNQVVVSIVFANLSPQTLKDLEFNVLDTLNTKLIR 1261
Query: 1025 PEGSSVHDGVPVPFQLPPGVSNEAQFVFTIQSIVMAQKLKGTLSFIAKDDEGATHEK 1081
G HD V VPF LPPG NE QF FT+ I QKL+GTL++I K +G+T EK
Sbjct: 1262 GLGQKHHDAVKVPFTLPPGAQNEGQFAFTVDDITAPQKLRGTLTYILKSADGSTQEK 1432
Score = 109 bits (272), Expect(2) = 1e-55, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Frame = +1
Query: 1081 KLDFRLHFSCSSYLITTPCYSDAFAKLLESGDLSM-NSIKVDGISMSFQNLLAKICFYHH 1139
K+DFR+ C SYL+T+PC S+ FA LL GDL+ S KV+ + F +LLA+I F+ H
Sbjct: 1429 KVDFRIALPCCSYLLTSPCKSEDFASLLSGGDLTAKGSAKVEVEGVPFAHLLARISFFTH 1608
Query: 1140 FSVVERVDSCASMYSRSIQGHHVCLLVKKGESSVSVDGKCSDATLLSSLLEEMKT 1194
F VVE+V AS++SRSIQ H VCLLVK ++++DGK + L+++LE++K+
Sbjct: 1609 FRVVEQVAESASLFSRSIQDHPVCLLVKMTNGALAIDGKSTHEGFLANVLEDIKS 1773
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +3
Query: 786 EDDKDPNDPYRALDIDLDKPLADSEKLPVQKHR 818
EDD D DPY+ LDI+LD PL D E +PV HR
Sbjct: 315 EDDGDNKDPYKMLDINLDAPLRDDETIPVPTHR 413
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 702 IPVVQIDLSVPLKVPGMPMSDQYVK 726
IPV IDLSVPL VPG+ SD+Y++
Sbjct: 65 IPVTPIDLSVPLHVPGLSSSDKYMQ 139
>12864
Length = 1210
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 103/155 (66%), Gaps = 6/155 (3%)
Frame = +2
Query: 1046 NEAQFVFTIQSIVMAQKLKGTLSFIAKDDEGATHEKLDFRLHFSCSSYLITTPC-----Y 1100
NE QF FT+ I QKL+GTL++I K +G+T EK+DFR+ C SYL+T+PC
Sbjct: 8 NEGQFAFTVDDITAPQKLRGTLTYILKSADGSTQEKVDFRIALPCCSYLLTSPCKSVCDC 187
Query: 1101 SDAFAKLLESGDLSM-NSIKVDGISMSFQNLLAKICFYHHFSVVERVDSCASMYSRSIQG 1159
S+ FA LL GDL+ S KV+ + F +LLA+I F+ HF VVE+V AS++SRSIQ
Sbjct: 188 SEDFASLLSGGDLTAKGSAKVEVEGVPFAHLLARISFFTHFRVVEQVAESASLFSRSIQD 367
Query: 1160 HHVCLLVKKGESSVSVDGKCSDATLLSSLLEEMKT 1194
H VCLLVK ++++DGK + L++ LE++K+
Sbjct: 368 HPVCLLVKMTNGALAIDGKSTHEGFLANXLEDIKS 472
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6680047|ref|NP_032169.1| guanine nucleotide binding
protein (G protein), beta polypeptide 2 like 1 [Mus musculus]
(317 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00561 414 e-133
17598 266 7e-72
12806 243 7e-65
07665 156 1e-38
13335 82 2e-16
01327 80 1e-15
02147 75 3e-14
03156 71 5e-13
30256 71 5e-13
19949 68 5e-12
27465 66 1e-11
03387 65 3e-11
12574 62 2e-10
17602 62 3e-10
03395 61 7e-10
18981 59 2e-09
12960 57 8e-09
02090 57 1e-08
02960 53 1e-07
11493 52 3e-07
13278 51 5e-07
21105 50 2e-06
37180 49 3e-06
19498 48 5e-06
17266 47 8e-06
01768 47 1e-05
01249 47 1e-05
26107 45 3e-05
19140 45 4e-05
33180 45 5e-05
01462 44 7e-05
19863 44 7e-05
26939 44 8e-05
30295 43 1e-04
04088 43 2e-04
15780 43 2e-04
01598 42 2e-04
15118 42 4e-04
16105 41 6e-04
14555 40 0.001
21921 40 0.001
31384 40 0.001
10264 39 0.002
31054 39 0.003
25880 39 0.003
14500 38 0.004
10162 38 0.004
04524 36 0.021
31864 36 0.021
29912 36 0.022
11915 36 0.024
27270 35 0.027
13890 35 0.028
34005 35 0.033
31474 35 0.045
05642 35 0.055
15972 34 0.066
35607 34 0.087
15337 33 0.10
17807 33 0.13
17298 33 0.15
00825 33 0.15
20662 33 0.18
16199 32 0.28
12140 32 0.33
27475 32 0.41
12841 32 0.42
15745 31 0.58
27681 31 0.78
03734 30 0.90
34511 30 1.2
31118 30 1.3
27806 30 1.6
01805 29 2.1
18320 29 2.5
07781 29 2.6
35695 28 3.6
30108 27 9.9
>00561
Length = 1003
Score = 414 bits (1065), Expect(2) = e-133, Method: Compositional matrix adjust.
Identities = 197/247 (79%), Positives = 218/247 (88%), Gaps = 1/247 (0%)
Frame = -3
Query: 19 TQIATTPQFPDMILSASRDKTIIMWKLTRDE-TNYGIPQRALRGHSHFVSDVVISSDGQF 77
TQIAT P+ PD I+SASRDKT+I+WKLTRDE TNYG PQ+ L GHSHF+SDVV+SSDG +
Sbjct: 1001 TQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNY 822
Query: 78 ALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV 137
ALSGSWD TLRLWDL G TTRRF GHTKDVLSVAFS+DNRQIVSGSRDKTIKLWNTL
Sbjct: 821 ALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAE 642
Query: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
CK+T+Q++ H++WVSCVRFSPN SNPIIVSCGWD+ VKVWNLANCKLK NH GH GYLNT
Sbjct: 641 CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNT 462
Query: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIK 257
VTVSPDGSLC SGGKD +A+LWDLN+GK+LYTL+ DIINALCFSPNRYWLC A GPSIK
Sbjct: 461 VTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPSIK 282
Query: 258 IWDLEGK 264
IWDL K
Sbjct: 281 IWDLACK 261
Score = 78.2 bits (191), Expect(2) = e-133, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = -2
Query: 267 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 314
V+EL+ EV+S +SKAE PQC SLAWS DGQTLFAGY+DN +RVWQV++
Sbjct: 255 VEELRPEVVSPTSKAEQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSV 112
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/86 (19%), Positives = 41/86 (47%)
Frame = -3
Query: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
L+ GHNG++ + +P + S +D ++W L + Y + H+ +
Sbjct: 503 LKNNHHGHNGYLNTVTVSPDG-SLCTSGGKDSKALLWDLNDGKNLYTL------EHNDII 345
Query: 67 SDVVISSDGQFALSGSWDGTLRLWDL 92
+ + S + ++ L ++ ++++WDL
Sbjct: 344 NALCFSPN-RYWLCVAYGPSIKIWDL 270
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 8/165 (4%)
Frame = -3
Query: 155 RFSPNSSNP-IIVSCGWDKLVKVWNLANCKLKTNH-------IGHTGYLNTVTVSPDGSL 206
+ + N +P I+S DK + VW L TN+ GH+ +++ V +S DG+
Sbjct: 998 QIATNPKDPDTIISASRDKTLIVWKLTR-DEDTNYGYPQKRLYGHSHFISDVVLSSDGNY 822
Query: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKII 266
SG D LWDL GK +G
Sbjct: 821 ALSGSWDQTLRLWDLAAGKTTRRFEGH--------------------------------- 741
Query: 267 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 311
++V+S +A+SAD + + +G D +++W
Sbjct: 740 ----TKDVLS------------VAFSADNRQIVSGSRDKTIKLWN 654
>17598
Length = 875
Score = 266 bits (681), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 180/283 (63%), Gaps = 8/283 (2%)
Frame = +1
Query: 29 DMILSASRDKTIIMWKLT------RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS 82
+ ++ RDK +I+W L DET +G P+R L+GHSHFVSDV +S+D ++ LS S
Sbjct: 4 EFLIXGGRDKLLIVWDLVPRKDGDEDET-WGGPRRTLQGHSHFVSDVSLSADSRYVLSSS 180
Query: 83 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV 142
WD TLRLWD+ G TTRRF+ HT+D L+VAFS DNRQI SG RDK +K+WNT+G CK+TV
Sbjct: 181 WDATLRLWDIKKGNTTRRFISHTRDALAVAFSPDNRQIASGGRDKALKIWNTVGECKFTV 360
Query: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
SH +WV+CV+F ++ +P++VS DK +KVW+ LK +GH +N + ++
Sbjct: 361 DANSHQDWVTCVKFHQDAKSPLVVSASMDKTIKVWDNQTMTLKHTFVGHKTQINAIDLAL 540
Query: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
ASG KDG M W++ G L +D +NA+ FSPN+YWL T I+IWDL
Sbjct: 541 KTYYLASGSKDGIVMTWNIQNGTFLGKIDCDCEVNAVKFSPNKYWLFVGTSEGIQIWDLP 720
Query: 263 GKIIVDELKQEVISTSSKAEPPQ--CTSLAWSADGQTLFAGYT 303
+ + +++ I K++ CTSLAW A G TLFAG++
Sbjct: 721 NQKKIKDIRASPIDAQHKSQKKSIACTSLAWDASGHTLFAGFS 849
>12806
Length = 961
Score = 243 bits (620), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 176/284 (61%), Gaps = 12/284 (4%)
Frame = +3
Query: 22 ATTPQFPDMILSASRDKTIIMWKL------TRDETNYGIPQRALRGHSHFVSDVVISSDG 75
AT P ++S RD II+W L D+T +G+P++ L GHSHF+SD+ +S+D
Sbjct: 39 ATKP----FLISGGRDNNIIVWDL*PKKDGDEDQT-WGVPRKTLTGHSHFISDLALSADS 203
Query: 76 QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL 135
+FALS SWD TLRLWD+ G+TT RF+ HT+DVL+VAFS DNRQI SG RDK +K+WN +
Sbjct: 204 RFALSSSWDATLRLWDIKKGSTTSRFINHTRDVLTVAFSPDNRQIASGGRDKNLKIWNIM 383
Query: 136 GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYL 195
G CKYTV +H++WV+CVRF ++ NPI+VS DK +KVW+ LK +GH +
Sbjct: 384 GECKYTVDANAHTDWVTCVRFHQDTKNPIVVSASNDKTIKVWDNHTMTLKNTFVGHKAQI 563
Query: 196 NTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF----SPNRYWLCAA 251
+ +S + SG KDG AM W++ EG + +D D INA+ F + + WL
Sbjct: 564 TALDMSTN--YLVSGSKDGIAMTWNVAEGSFVGKIDCDDQINAIKFNIENNKKKVWLFIG 737
Query: 252 TGPSIKIWDLEGKIIVDELKQEVI--STSSKAEPPQCTSLAWSA 293
T I+IWD G+ + ELK I + + +P CTSLA +A
Sbjct: 738 TQNGIQIWDYSGEKKIKELKASPIDPQNAKQKKPIACTSLASTA 869
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 13 GHNGWVTQIATTPQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
H WVT + + +++SAS DKTI +W + + + GH ++ + +
Sbjct: 414 AHTDWVTCVRFHQDTKNPIVVSASNDKTIKVW-----DNHTMTLKNTFVGHKAQITALDM 578
Query: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG 103
S++ + +SGS DG W++ G+ FVG
Sbjct: 579 STN--YLVSGSKDGIAMTWNVAEGS----FVG 656
>07665
Length = 435
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 82/99 (82%)
Frame = -2
Query: 219 WDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTS 278
WDLN+GK+LYTL+ DIINALCFSPNRYWLC A GPSIKIWDL K V+EL+ EV+S +
Sbjct: 392 WDLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPT 213
Query: 279 SKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 317
SKAE PQC SLAWS DGQTLFAGY+DN +RVWQV++
Sbjct: 212 SKAEQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSVSAH 96
>13335
Length = 863
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 23/206 (11%)
Frame = +1
Query: 79 LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN-TLGV 137
+SGS D T+ +W++ T R +VGH V+++A+S + +VSGS + + +W+ + G
Sbjct: 109 VSGSDDDTICMWEVATQKLVRSYVGHEDSVMALAYSPNGHYLVSGSPNGDLYVWDASFGH 288
Query: 138 CKY-TVQDESHSEWVSCVRFSP--------NSS--NPIIVSCGWDKLVKVWNLA------ 180
C++ T++ ++H V+C FSP NSS N ++ + G D L+K+W +
Sbjct: 289 CRHLTLRVDAHDLGVTCCEFSPTFGTACAENSSTCNLLLATGGKDNLIKLWTFSAQVGSP 468
Query: 181 NCKLKTNHI--GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDII 236
L+ I GH+ + SP +L ASG D LWD +G L++++ +
Sbjct: 469 EVTLQCRDILSGHSDLVMACAFSPSSALLASGSFDKSVRLWDSVKGVALFSIEACHSRFV 648
Query: 237 NALCFSPNRYWLCAATGPS-IKIWDL 261
FS + L + + IKIW L
Sbjct: 649 TCCAFSIDGTLLASGSMDRIIKIWKL 726
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Frame = +1
Query: 31 ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 90
++S S D TI MW++ + R+ GH V + S +G + +SGS +G L +W
Sbjct: 106 LVSGSDDDTICMWEVATQKL-----VRSYVGHEDSVMALAYSPNGHYLVSGSPNGDLYVW 270
Query: 91 DLTTGTT---TRRFVGHTKDVLSVAF------------SSDNRQIVSGSRDKTIKLWN-- 133
D + G T R H V F S+ N + +G +D IKLW
Sbjct: 271 DASFGHCRHLTLRVDAHDLGVTCCEFSPTFGTACAENSSTCNLLLATGGKDNLIKLWTFS 450
Query: 134 -TLGVCKYTVQDES----HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTN 187
+G + T+Q HS+ V FSP+S+ ++ S +DK V++W+ + L +
Sbjct: 451 AQVGSPEVTLQCRDILSGHSDLVMACAFSPSSA--LLASGSFDKSVRLWDSVKGVALFSI 624
Query: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
H+ ++ S DG+L ASG D +W L +
Sbjct: 625 EACHSRFVTCCAFSIDGTLLASGSMDRIIKIWKLTD 732
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 24/249 (9%)
Frame = +1
Query: 89 LWDLTTGTTTRRFVGHTKDVLSVA-FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
+WD+ TG+ + +K + V FS + +VSGS D TI +W + K H
Sbjct: 10 VWDVKTGSIKGEYQHASKSSIRVCKFSPSSSHLVSGSDDDTICMWE-VATQKLVRSYVGH 186
Query: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPD-GS 205
+ V + +SPN + S D V + +C+ T + H + SP G+
Sbjct: 187 EDSVMALAYSPNGHYLVSGSPNGDLYVWDASFGHCRHLTLRVDAHDLGVTCCEFSPTFGT 366
Query: 206 LC-----------ASGGKDGQAMLWDLNE--GKHLYTLDGGDIIN-------ALCFSPNR 245
C A+GGKD LW + G TL DI++ A FSP+
Sbjct: 367 ACAENSSTCNLLLATGGKDNLIKLWTFSAQVGSPEVTLQCRDILSGHSDLVMACAFSPSS 546
Query: 246 YWLCAAT-GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 304
L + + S+++W D +K + + T A+S DG L +G D
Sbjct: 547 ALLASGSFDKSVRLW--------DSVKGVALFSIEACHSRFVTCCAFSIDGTLLASGSMD 702
Query: 305 NLVRVWQVT 313
++++W++T
Sbjct: 703 RIIKIWKLT 729
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 18/149 (12%)
Frame = +1
Query: 3 EQMTLRGTLKGHNGWVTQIATTPQFPD-----------MILSASRDKTIIMWKLTRDETN 51
+TLR + H+ VT +P F ++ + +D I +W +
Sbjct: 292 RHLTLR--VDAHDLGVTCCEFSPTFGTACAENSSTCNLLLATGGKDNLIKLWTFS---AQ 456
Query: 52 YGIPQRALR------GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG-H 104
G P+ L+ GHS V S SGS+D ++RLWD G H
Sbjct: 457 VGSPEVTLQCRDILSGHSDLVMACAFSPSSALLASGSFDKSVRLWDSVKGVALFSIEACH 636
Query: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
++ V AFS D + SGS D+ IK+W
Sbjct: 637 SRFVTCCAFSIDGTLLASGSMDRIIKIWK 723
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%)
Frame = +1
Query: 5 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 64
+ R L GH+ V A +P ++ S S DK++ +W + + I HS
Sbjct: 478 LQCRDILSGHSDLVMACAFSPS-SALLASGSFDKSVRLWDSVKGVALFSIEA----CHSR 642
Query: 65 FVSDVVISSDGQFALSGSWDGTLRLWDLT 93
FV+ S DG SGS D +++W LT
Sbjct: 643 FVTCCAFSIDGTLLASGSMDRIIKIWKLT 729
>01327
Length = 2215
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 11/257 (4%)
Frame = +3
Query: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
P + LS S+DK+++++ D N + R GH ++ V + S S D T+
Sbjct: 75 PGLCLSGSKDKSVVLY----DYQNGRLEDR-WTGHDREITKVCYGASCNGMFSASRDKTI 239
Query: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDES 146
++W + R F+GH V ++ ++DN + SGSRD T+++W+ G C Q+
Sbjct: 240 KMWQRGNSHSIRDFIGHDMVVTAIHLNTDNTLLCSGSRDNTVRIWDVETGAC--LRQNNI 413
Query: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
V+ V++ P S +I+ G DK V++++ + + + V+ DG
Sbjct: 414 PQNLVTDVKWLPGSH--LIIQAGEDKEVRIYDSRTLGIVRSFTKKQYIQMSCDVTADGQF 587
Query: 207 CAS-----GGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWL----CAATGPSI 256
C + GG +A LW L++G G + I A F P+ + A+ S+
Sbjct: 588 CLTCSNGFGGNGCEATLWQLSDGSIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSV 767
Query: 257 KIWDLEGKIIVDELKQE 273
++W++ K V E E
Sbjct: 768 RVWNMFTKECVCEQNFE 818
>02147
Length = 1547
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 108/255 (42%), Gaps = 38/255 (14%)
Frame = +2
Query: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
GT +GH G V AT + + + D + +W + E + H H V
Sbjct: 155 GTFEGHKGAVWG-ATLNREATRAATGAADFSAKIWDAEKGE------ELQTFSHKHIVKS 313
Query: 69 VVISSDGQFALSGSWDGTLRLWDL-TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
V S DG L+GS + L+++DL T + F GHT ++ F SD ++I+S S DK
Sbjct: 314 VDFSHDGTALLTGSNEKLLKVFDLVNTDAEPKSFAGHTSNIKGALFLSDGKRIISASDDK 493
Query: 128 TIKLWNTLGVCKYTVQ--------------DE-----SHSEWVSCVR------------- 155
T++LW +L C+ Q D+ +HS+ ++ +
Sbjct: 494 TVRLW-SLETCQEVQQLTFDTPPTSLTLSPDKNTIIVTHSQNIAFYQADTLREMKKFEAE 670
Query: 156 -----FSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASG 210
S + S V+ G D + ++ K + GH G ++ V SPDG L ASG
Sbjct: 671 APISSASLHQSERFFVAGGEDFKMYKFDYETGKEIESFKGHFGPVHCVRFSPDGELYASG 850
Query: 211 GKDGQAMLWDLNEGK 225
+DG LW G+
Sbjct: 851 SEDGTLRLWQTTIGR 895
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 108/257 (42%)
Frame = +2
Query: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
GH V ++ + A +G+ D + ++WD G + F H V SV FS D
Sbjct: 161 FEGHKGAVWGATLNREATRAATGAADFSAKIWDAEKGEELQTF-SHKHIVKSVDFSHDGT 337
Query: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
+++GS +K +K+++ + H+ + F + I+S DK V++W+
Sbjct: 338 ALLTGSNEKLLKVFDLVNTDAEPKSFAGHTSNIKGALFLSDGKR--IISASDDKTVRLWS 511
Query: 179 LANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINA 238
L C+ + + ++T+SPD + A + + + + + I++
Sbjct: 512 LETCQ-EVQQLTFDTPPTSLTLSPDKNTIIVTHSQNIA-FYQADTLREMKKFEAEAPISS 685
Query: 239 LCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTL 298
+ + A G K++ + E +E+ S P C + +S DG+
Sbjct: 686 ASLHQSERFFVAG-GEDFKMYKFDY-----ETGKEIESFKGHFGPVHC--VRFSPDGELY 841
Query: 299 FAGYTDNLVRVWQVTIG 315
+G D +R+WQ TIG
Sbjct: 842 ASGSEDGTLRLWQTTIG 892
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Frame = +2
Query: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG-----QFALSGS 82
P L+ S DK I+ +++ Y LR F ++ ISS +F ++G
Sbjct: 554 PPTSLTLSPDKNTIIVTHSQNIAFY--QADTLREMKKFEAEAPISSASLHQSERFFVAGG 727
Query: 83 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN-----TLGV 137
D + +D TG F GH V V FS D SGS D T++LW T G+
Sbjct: 728 EDFKMYKFDYETGKEIESFKGHFGPVHCVRFSPDGELYASGSEDGTLRLWQTTIGRTYGL 907
Query: 138 CKYTVQDESHSE 149
K + DE+ ++
Sbjct: 908 WKCVIPDEADAQ 943
>03156
Length = 1014
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 11/224 (4%)
Frame = +1
Query: 61 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI 120
GH ++ V + S S D T+++W + R F+GH V ++ ++DN +
Sbjct: 49 GHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGHDMVVTAIHLNTDNTLL 228
Query: 121 VSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
SGSRD T+++W+ G C Q+ V+ V++ P S +I+ G DK V++++
Sbjct: 229 CSGSRDNTVRIWDVETGACLR--QNNIPQNLVTDVKWLPGSH--LIIQAGEDKEVRIYDS 396
Query: 180 ANCKLKTNHIGHTGYLNTVTVSPDGSLCAS-----GGKDGQAMLWDLNEGKHLYTLDGG- 233
+ + + V+ DG C + GG +A LW L++G G
Sbjct: 397 RTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGCEATLWQLSDGSIQNEFKGHR 576
Query: 234 DIINALCFSPNRYWL----CAATGPSIKIWDLEGKIIVDELKQE 273
+ I A F P+ + A+ S+++W++ K V E E
Sbjct: 577 EAIEACLFLPSNQDMTLIATASRDCSVRVWNMFTKECVCEQNFE 708
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 10/219 (4%)
Frame = +1
Query: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
GH+ +T++ M SASRDKTI MW+ + R GH V+ + ++
Sbjct: 49 GHDREITKVCYGASCNGM-FSASRDKTIKMWQRGNSHS-----IRDFIGHDMVVTAIHLN 210
Query: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLW 132
+D SGS D T+R+WD+ TG R+ V V + + I+ DK ++++
Sbjct: 211 TDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVKWLPGSHLIIQAGEDKEVRIY 390
Query: 133 N--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC-----GWDKLVKVWNLANCKLK 185
+ TLG+ V+ + +++ + + ++C G +W L++ ++
Sbjct: 391 DSRTLGI----VRSFTKKQYIQ-MSCDVTADGQFCLTCSNGFGGNGCEATLWQLSDGSIQ 555
Query: 186 TNHIGHTGYLNTVTVSP---DGSLCASGGKDGQAMLWDL 221
GH + P D +L A+ +D +W++
Sbjct: 556 NEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNM 672
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 90/236 (38%), Gaps = 9/236 (3%)
Frame = +1
Query: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
+LRL + G R+ GH +++ V + + + S SRDKTIK+W ++++D
Sbjct: 4 SLRLSKM--GRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGN--SHSIRDF 171
Query: 146 -SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPD 203
H V+ + N+ N ++ S D V++W++ L+ N+I + V P
Sbjct: 172 IGHDMVVTAIHL--NTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQN-LVTDVKWLPG 342
Query: 204 GSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC-------AATGPSI 256
L G+D + ++D + + I C C G
Sbjct: 343 SHLIIQAGEDKEVRIYDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGCEA 522
Query: 257 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
+W L I +E K + C L + D + D VRVW +
Sbjct: 523 TLWQLSDGSIQNEFK------GHREAIEACLFLPSNQDMTLIATASRDCSVRVWNM 672
>30256
Length = 961
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Frame = +3
Query: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
TL GH+ V ++ + + ++S SRD T+ +W + G L GH V
Sbjct: 147 TLYGHSSTVRCLSLSGK---KVVSGSRDATLRVW-----DIESGHCLNVLLGHMAAVR-- 296
Query: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
+ DG+ +SG+ D T+R+WD T + GHT V S+ F D +VSGS D +I
Sbjct: 297 CVQYDGKRVVSGAXDYTVRVWDPDTASCLHTLQGHTNRVYSLQF--DGVYVVSGSLDTSI 470
Query: 130 KLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
++W+ G +T+ H S + N ++VS D VKVW++ K
Sbjct: 471 RVWDVRCGKLVHTLM--GHQSLTSGLELKDN----LLVSGNADSTVKVWDVHTGKCLQTL 632
Query: 189 IGHTGYLNTVT-VSPDGSLCASGGKDGQAMLWDLNEG---KHLYTLDGG 233
+G + + VT + + + DG LWDLN G ++L TL G
Sbjct: 633 LGPNKHRSAVTCLQFNKKFVVTCSDDGTVKLWDLNTGDFIRNLITLPSG 779
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Frame = +3
Query: 75 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
G +SGS D +L++W+ TG T GH+ V ++ S +++VSGSRD T+++W+
Sbjct: 72 GNTVISGSTDRSLKVWNADTGVCTHTLYGHSSTVRCLSLSG--KKVVSGSRDATLRVWDI 245
Query: 135 L-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG 193
G C + H V CV++ +VS D V+VW+ GHT
Sbjct: 246 ESGHCLNVLL--GHMAAVRCVQYDGKR----VVSGAXDYTVRVWDPDTASCLHTLQGHTN 407
Query: 194 YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATG 253
+ ++ DG SG D +WD+ GK ++TL G + + + +
Sbjct: 408 RV--YSLQFDGVYVVSGSLDTSIRVWDVRCGKLVHTLMGHQSLTSGLELKDNLLVSGNAD 581
Query: 254 PSIKIWDLE 262
++K+WD+
Sbjct: 582 STVKVWDVH 608
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +3
Query: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNR 245
N IGHTG + + ++ G+ SG D +W+ + G +TL G + L S +
Sbjct: 27 NLIGHTGGVWSSQMT--GNTVISGSTDRSLKVWNADTGVCTHTLYGHSSTVRCLSLSGKK 200
Query: 246 YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 305
+ + ++++WD+E ++ L + + +C DG+ + +G D
Sbjct: 201 V-VSGSRDATLRVWDIESGHCLNVLLGHMAAV-------RCVQY----DGKRVVSGAXDY 344
Query: 306 LVRVW 310
VRVW
Sbjct: 345 TVRVW 359
>19949
Length = 903
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%)
Frame = +2
Query: 75 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
G + SGS D ++LWD+ + GHT V + FS D R I S S D +KLW+
Sbjct: 29 GAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASEDGLVKLWD- 205
Query: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
L K + H + V+ + F P+ ++ S D+ VK W+L +L +
Sbjct: 206 LTAGKLLTDLKLHRDAVNTIEFHPHEF--LLASGSADRTVKFWDLETFQLISTTEPEANS 379
Query: 195 LNTVTVSPDGSLCASGGKD 213
+ ++ PDG SG KD
Sbjct: 380 IRSILFHPDGVCLYSGSKD 436
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Frame = +2
Query: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
V S+ F SGS D +KLW+ C YT + H+ V C+RFSP+ I
Sbjct: 2 VKSLDFHPYGAYTASGSMDCNVKLWDIRRKGCIYTYK--GHTGCVCCLRFSPDGR--WIA 169
Query: 167 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 226
S D LVK+W+L KL T+ H +NT+ P L ASG D WDL +
Sbjct: 170 SASEDGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWDLETFQL 349
Query: 227 LYTLDG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD 268
+ T + + I ++ F P+ L + + ++K++ E + D
Sbjct: 350 ISTTEPEANSIRSILFHPDGVCLYSGSKDTLKVYHWEPLELYD 478
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = +2
Query: 174 VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD-G 232
VK+W++ + GHTG + + SPDG AS +DG LWDL GK L L
Sbjct: 65 VKLWDIRRKGCIYTYKGHTGCVCCLRFSPDGRWIASASEDGLVKLWDLTAGKLLTDLKLH 244
Query: 233 GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 291
D +N + F P+ + L + + ++K WDLE ++IST ++ E S+ +
Sbjct: 245 RDAVNTIEFHPHEFLLASGSADRTVKFWDLE--------TFQLIST-TEPEANSIRSILF 397
Query: 292 SADGQTLFAGYTDNL 306
DG L++G D L
Sbjct: 398 HPDGVCLYSGSKDTL 442
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%)
Frame = +2
Query: 33 SASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL 92
S S D + +W + R Y +GH+ V + S DG++ S S DG ++LWDL
Sbjct: 44 SGSMDCNVKLWDIRRKGCIY-----TYKGHTGCVCCLRFSPDGRWIASASEDGLVKLWDL 208
Query: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
T G H V ++ F + SGS D+T+K W+ L + E + +
Sbjct: 209 TAGKLLTDLKLHRDAVNTIEFHPHEFLLASGSADRTVKFWD-LETFQLISTTEPEANSIR 385
Query: 153 CVRFSPN 159
+ F P+
Sbjct: 386 SILFHPD 406
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 54/124 (43%)
Frame = +2
Query: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
T KGH G V + +P I SAS D + +W LT G L+ H V+ +
Sbjct: 104 TYKGHTGCVCCLRFSPD-GRWIASASEDGLVKLWDLTA-----GKLLTDLKLHRDAVNTI 265
Query: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
SGS D T++ WDL T + S+ F D + SGS+D T+
Sbjct: 266 EFHPHEFLLASGSADRTVKFWDLETFQLISTTEPEANSIRSILFHPDGVCLYSGSKD-TL 442
Query: 130 KLWN 133
K+++
Sbjct: 443 KVYH 454
>27465
Length = 658
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = -1
Query: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
+ LR H +++V + G ++GS+D T ++WD + GH V ++AF++
Sbjct: 379 KVLRAHILPLTNVAFNKSGSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAFNNP 200
Query: 117 -NRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLV 174
++++GS DKT KLW+T G C +T++ H+ + CV F+P+S+ +I + D
Sbjct: 199 FGDKVITGSFDKTCKLWSTADGKCYHTLR--GHTAEIVCVSFNPSST--LIATGSMDTTC 32
Query: 175 KVWNL 179
++W++
Sbjct: 31 RLWDV 17
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%)
Frame = -1
Query: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
H + +VAF+ ++GS D+T K+W+T + E H V + F+ N
Sbjct: 367 AHILPLTNVAFNKSGSSFITGSYDRTCKIWDTASAEELHTL-EGHRNVVYAIAFN-NPFG 194
Query: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
+++ +DK K+W+ A+ K GHT + V+ +P +L A+G D LWD+
Sbjct: 193 DKVITGSFDKTCKLWSTADGKCYHTLRGHTAEIVCVSFNPSSTLIATGSMDTTCRLWDVE 14
Query: 223 EGK 225
+ +
Sbjct: 13 KAQ 5
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Frame = -1
Query: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
L L+ H +T +A I + S D+T +W E + L GH
Sbjct: 394 HFYLFKVLRAHILPLTNVAFNKSGSSFI-TGSYDRTCKIWDTASAEELH-----TLEGHR 233
Query: 64 HFVSDVVISSD-GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
+ V + ++ G ++GS+D T +LW G GHT +++ V+F+ + I +
Sbjct: 232 NVVYAIAFNNPFGDKVITGSFDKTCKLWSTADGKCYHTLRGHTAEIVCVSFNPSSTLIAT 53
Query: 123 GSRDKTIKLWN 133
GS D T +LW+
Sbjct: 52 GSMDTTCRLWD 20
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%)
Frame = -1
Query: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
TL+GH V IA F D +++ S DKT +W T G LRGH+ + V
Sbjct: 250 TLEGHRNVVYAIAFNNPFGDKVITGSFDKTCKLW-----STADGKCYHTLRGHTAEIVCV 86
Query: 70 VISSDGQFALSGSWDGTLRLWDL 92
+ +GS D T RLWD+
Sbjct: 85 SFNPSSTLIATGSMDTTCRLWDV 17
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Frame = -1
Query: 109 LSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVR--------FSPNS 160
L V ++ Q+++ S+ + +K W K +D+ H +R + N
Sbjct: 505 LVVQEIAEKEQLITPSKQEHVKNW-CFACRKTRPKDDHHFYLFKVLRAHILPLTNVAFNK 329
Query: 161 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS-PDGSLCASGGKDGQAMLW 219
S ++ +D+ K+W+ A+ + GH + + + P G +G D LW
Sbjct: 328 SGSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAFNNPFGDKVITGSFDKTCKLW 149
Query: 220 DLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGP---SIKIWDLE 262
+GK +TL G +C S N ATG + ++WD+E
Sbjct: 148 STADGKCYHTL-RGHTAEIVCVSFNPSSTLIATGSMDTTCRLWDVE 14
>03387
Length = 1891
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 10/269 (3%)
Frame = +1
Query: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKL--TRDETNYGIPQRALRGHSHFVSD 68
LKGH ++ P +LSAS D TI +W + T+ E+ GH+ V D
Sbjct: 349 LKGHQKEGYGLSWNPNLNGHLLSASDDHTICLWDINSTQRESRVVDAHTIFTGHTSVVED 528
Query: 69 VV--ISSDGQFALSGSWDGTLRLWDLTTGTTTRR---FVGHTKDVLSVAFSSDNRQIVS- 122
V + + F S + D L +WD + TT++ HT +V ++F+ + I++
Sbjct: 529 VAWHLLHESLFG-SVADDQKLMIWDTRSNTTSKPSHVVDAHTAEVNCLSFNPYSEFILAT 705
Query: 123 GSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
GS DKT+ LW+ + ESH + + V++SP++ I+ S G D+ + VW+L+
Sbjct: 706 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET-ILASSGTDRRLHVWDLSK- 879
Query: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
IG P L GG + I+ ++
Sbjct: 880 ------IGEEQLPEDAEDGPPELLFIHGGHTAK--------------------ISDFSWN 981
Query: 243 PNRYWL-CAATGPSI-KIWDLEGKIIVDE 269
PN W+ C+ + +I ++W + I DE
Sbjct: 982 PNEPWIVCSVSEDNIMQVWQMAENIYSDE 1068
>12574
Length = 521
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +3
Query: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
L GH+ +S V S +G + S S D +++W G + GH + VA+SSD++
Sbjct: 174 LAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAGHKLGLSDVAWSSDSK 353
Query: 119 QIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
+ S S DKT+K+W + G C T++ HS +V C F+P S+ +IVS
Sbjct: 354 LLCSASDDKTLKIWEFSTGKCMKTLK--GHSNYVFCCNFNPQSN--LIVS 491
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%)
Frame = +3
Query: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF 65
TL+ TL GH ++ + +P D + S+S DK I +W G ++ + GH
Sbjct: 159 TLKFTLAGHTKALSAVKFSPN-GDWLASSSADKLIKIWGAYD-----GKFEKTIAGHKLG 320
Query: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS 124
+SDV SSD + S S D TL++W+ +TG + GH+ V F+ + IVSGS
Sbjct: 321 LSDVAWSSDSKLLCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNFNPQSNLIVSGS 497
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
H++ +S V+FSPN + S DKL+K+W + K + GH L+ V S D L
Sbjct: 183 HTKALSAVKFSPN--GDWLASSSADKLIKIWGAYDGKFEKTIAGHKLGLSDVAWSSDSKL 356
Query: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC-FSP 243
S D +W+ + GK + TL G C F+P
Sbjct: 357 LCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNFNP 470
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Frame = +3
Query: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRF--VGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
++DG+ A + + GT + T T +F GHTK + +V FS + + S S DK I
Sbjct: 84 TADGKHAPASATSGT-KSSATQKPTYTLKFTLAGHTKALSAVKFSPNGDWLASSSADKLI 260
Query: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
K+W K+ H +S V +S +S ++ S DK +K+W + K
Sbjct: 261 KIWGAYDG-KFEKTIAGHKLGLSDVAWSSDS--KLLCSASDDKTLKIWEFSTGKCMKTLK 431
Query: 190 GHTGYLNTVTVSPDGSLCASG 210
GH+ Y+ +P +L SG
Sbjct: 432 GHSNYVFCCNFNPQSNLIVSG 494
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFS 242
LK GHT L+ V SP+G AS D +W +GK T+ G + ++ + +S
Sbjct: 162 LKFTLAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKFEKTIAGHKLGLSDVAWS 341
Query: 243 PNRYWLCAAT-GPSIKIWDLEGKIIVDELK 271
+ LC+A+ ++KIW+ + LK
Sbjct: 342 SDSKLLCSASDDKTLKIWEFSTGKCMKTLK 431
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +3
Query: 228 YTLDGG-DIINALCFSPNRYWLCAATGPS-IKIWD-LEGKIIVDELKQEVISTSSKAEPP 284
+TL G ++A+ FSPN WL +++ IKIW +GK ++ I+
Sbjct: 168 FTLAGHTKALSAVKFSPNGDWLASSSADKLIKIWGAYDGKF------EKTIA----GHKL 317
Query: 285 QCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
+ +AWS+D + L + D +++W+ + G
Sbjct: 318 GLSDVAWSSDSKLLCSASDDKTLKIWEFSTG 410
>17602
Length = 481
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Frame = +3
Query: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDES 146
R+WD+ TG + H+ V +V F+ D IVS S D ++W+T G C T+ D+
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDD 182
Query: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS---PD 203
+ VS V+FSPN I++ D +K+W+ + K ++GH + +
Sbjct: 183 NPP-VSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSVTG 353
Query: 204 GSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINA 238
G SG +D +W+L LD GD A
Sbjct: 354 GKWIVSGSEDNMVYIWNL--------LDQGDSTEA 434
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +3
Query: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSS 115
+ L HS V+ V + DG +S S+DG R+WD +G + +S V FS
Sbjct: 36 KTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDDNPPVSFVKFSP 215
Query: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLV 174
+ + I++ + D T+KLW+ + G C T + ++ FS + IVS D +V
Sbjct: 216 NGKYILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSV-TGGKWIVSGSEDNMV 392
Query: 175 KVWNL 179
+WNL
Sbjct: 393 YIWNL 407
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGH--TKDVLSVAFS-SDNRQIVS 122
VS V S +G++ L+ + D TL+LWD + G + +VGH K + FS + + IVS
Sbjct: 192 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSVTGGKWIVS 371
Query: 123 GSRDKTIKLWNTL 135
GS D + +WN L
Sbjct: 372 GSEDNMVYIWNLL 410
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Frame = +3
Query: 175 KVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL--DG 232
++W++ K H+ + V + DGSL S DG +WD G+ L TL D
Sbjct: 3 RIWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLXTLIDDD 182
Query: 233 GDIINALCFSPN-RYWLCAATGPSIKIWDL-EGKIIVDELKQEVISTSSKAEPPQCTSLA 290
++ + FSPN +Y L A ++K+WD +GK LK V + K C
Sbjct: 183 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC----LKTYVGHRNEK----YCIFAN 338
Query: 291 WSA-DGQTLFAGYTDNLVRVWQV 312
+S G+ + +G DN+V +W +
Sbjct: 339 FSVTGGKWIVSGSEDNMVYIWNL 407
>03395
Length = 2795
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 11/222 (4%)
Frame = +2
Query: 66 VSDVVISSDGQFALSGSWDGTLRLWDLT----TGTTTRRFVGHTKD----VLSVAFSSDN 117
V+ + ++S G +SG +G +R+WD+ TG T V + K+ V ++ +++
Sbjct: 5 VTAIAVTSCGTKLVSGGGEGQVRVWDIVKDMLTGKTRGDLVANMKEHKGKVTAIQIHTND 184
Query: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
R VS S D + +W+ + Q + CV F + I++ G D + W
Sbjct: 185 RCCVSASTDGSTIIWDL--ITNTRSQIVLANTLFKCVCFGGKDLH--ILTSGTDHKIGYW 352
Query: 178 NLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDI 235
+ + L G TG +NT+ + DG +GG+D LW NEG+ +T G +
Sbjct: 353 EVGDGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSLLKLWRYNEGEVTHTGIGHSNQ 532
Query: 236 INALCFSPNRYWLCA-ATGPSIKIWDLEGKIIVDELKQEVIS 276
I PNR+++ + ++ IW VD L + IS
Sbjct: 533 ITKARICPNRHYIVSGGEDGALHIWKFPDGC*VDCLPRHGIS 658
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 3/210 (1%)
Frame = +2
Query: 18 VTQIATTPQFPDMILSASRDKTIIMWKLTRD---ETNYGIPQRALRGHSHFVSDVVISSD 74
VT IA T ++ S + + +W + +D G ++ H V+ + I ++
Sbjct: 5 VTAIAVTSCGTKLV-SGGGEGQVRVWDIVKDMLTGKTRGDLVANMKEHKGKVTAIQIHTN 181
Query: 75 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
+ +S S DG+ +WDL T T ++ + +T V F + I++ D I W
Sbjct: 182 DRCCVSASTDGSTIIWDLITNTRSQIVLANTL-FKCVCFGGKDLHILTSGTDHKIGYWEV 358
Query: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 194
+ S + ++ + + I++ G D L+K+W ++ IGH+
Sbjct: 359 GDGGLLRELEGSQTGAINTIDIDRDGQT--ILTGGEDSLLKLWRYNEGEVTHTGIGHSNQ 532
Query: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
+ + P+ SGG+DG +W +G
Sbjct: 533 ITKARICPNRHYIVSGGEDGALHIWKFPDG 622
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 9/169 (5%)
Frame = +2
Query: 156 FSPNSSNPIIVSCGWDKLVKVWNLAN--------CKLKTNHIGHTGYLNTVTVSPDGSLC 207
+ S +VS G + V+VW++ L N H G + + + + C
Sbjct: 14 IAVTSCGTKLVSGGGEGQVRVWDIVKDMLTGKTRGDLVANMKEHKGKVTAIQIHTNDRCC 193
Query: 208 ASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFS-PNRYWLCAATGPSIKIWDLEGKII 266
S DG ++WDL + + +CF + + L + T I W++ +
Sbjct: 194 VSASTDGSTIIWDLITNTRSQIVLANTLFKCVCFGGKDLHILTSGTDHKIGYWEVGDGGL 373
Query: 267 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
+ EL+ ++ ++ DGQT+ G D+L+++W+ G
Sbjct: 374 LRELE--------GSQTGAINTIDIDRDGQTILTGGEDSLLKLWRYNEG 496
>18981
Length = 407
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%)
Frame = -2
Query: 27 FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT 86
+MI+SA+ D+T+ +W L LRGH+ V V I G+ +SGSWD T
Sbjct: 391 LDNMIISAATDRTLRVWCLKNT-----CLLHTLRGHNDDVECVCIY--GRRVVSGSWDKT 233
Query: 87 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLW 132
L +W++ TG + GHT+ + +V F D + VSGS D ++ W
Sbjct: 232 LIVWEVDTGRPVHQLHGHTEAITAVQF--DEGKAVSGSADGDVRTW 101
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = -2
Query: 117 NRQIVSGSRDKTIKLWNTLGVC-KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
+ I+S + D+T+++W C +T++ H++ V CV +VS WDK +
Sbjct: 388 DNMIISAATDRTLRVWCLKNTCLLHTLR--GHNDDVECVCIYGRR----VVSGSWDKTLI 227
Query: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI 235
VW + + GHT + V D SG DG W L+ G+ L T+ G
Sbjct: 226 VWEVDTGRPVHQLHGHTEAITAVQF--DEGKAVSGSADGDVRTWALDTGQCLLTMTTGQD 53
Query: 236 INALCFSPNRYWLCA 250
I C N+ + A
Sbjct: 52 IEVYCVVYNQEVIAA 8
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -2
Query: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
+ +I+S D+ ++VW L N L GH + V + G SG D ++W++
Sbjct: 388 DNMIISAATDRTLRVWCLKNTCLLHTLRGHNDDVECVCIY--GRRVVSGSWDKTLIVWEV 215
Query: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLE 262
+ G+ ++ L G + I A+ F + +A G ++ W L+
Sbjct: 214 DTGRPVHQLHGHTEAITAVQFDEGKAVSGSADG-DVRTWALD 92
>12960
Length = 550
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Frame = +2
Query: 11 LKGHNGWVTQIATTPQFPDMILSA-----SRDKTIIMWKLT-RDETNYGIPQRALRGHSH 64
LK + ++ PQ P+ +LS S T + ++L R E Q+A+R
Sbjct: 23 LKTKPATLERLVGLPQ-PN*VLSVFNKTHSVQNTNMKFELPDRKEVTINCKQQAVRA--- 190
Query: 65 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS 124
V S D ++ ++ D +++LW+ + ++GH +VL S DN QI SG
Sbjct: 191 ----VRFSVDSRYCMTCGSDKSVKLWNPHRELFLKTYIGHGHEVLDAQGSGDNSQICSGG 358
Query: 125 RDKTIKLWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
DKT+ L++ + KY H+ V+CV+F N + +I+S D V+ W+
Sbjct: 359 IDKTVVLFDVASGQALRKY----RDHAGTVNCVKF--NEESTVILSGSLDNTVRAWD 511
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%)
Frame = +2
Query: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
++ DK++ +W R+ + + GH H V D S D SG D T+ L+D
Sbjct: 221 MTCGSDKSVKLWNPHRE-----LFLKTYIGHGHEVLDAQGSGDNSQICSGGIDKTVVLFD 385
Query: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
+ +G R++ H V V F+ ++ I+SGS D T++ W+T
Sbjct: 386 VASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDT 514
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA 208
+ V VRFS +S ++CG DK VK+WN +IGH + S D S
Sbjct: 176 QAVRAVRFSVDSR--YCMTCGSDKSVKLWNPHRELFLKTYIGHGHEVLDAQGSGDNSQIC 349
Query: 209 SGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNR-YWLCAATGPSIKIWDLEGK 264
SGG D +L+D+ G+ L D +N + F+ L + +++ WD +
Sbjct: 350 SGGIDKTVVLFDVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTRSR 523
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +2
Query: 108 VLSVAFSSDNRQIVSGSRDKTIKLWN---TLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
V +V FS D+R ++ DK++KLWN L + Y H V + S ++S
Sbjct: 182 VRAVRFSVDSRYCMTCGSDKSVKLWNPHRELFLKTYI----GHGHEVLDAQGSGDNSQ-- 343
Query: 165 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
I S G DK V ++++A+ + + H G +N V + + ++ SG D WD
Sbjct: 344 ICSGGIDKTVVLFDVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTRSR 523
Query: 225 KH 226
H
Sbjct: 524 SH 529
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 30 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 89
I S DKT++++ + G R R H+ V+ V + + LSGS D T+R
Sbjct: 341 QICSGGIDKTVVLFDVAS-----GQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRA 505
Query: 90 WDLTTGTTT 98
WD + + T
Sbjct: 506 WDTRSRSHT 532
>02090
Length = 1841
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%)
Frame = -3
Query: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
T+ +W+ L ++ E S +C + + + SC D + VW+L N L
Sbjct: 1689 TLSIWD-LATPTPRIKAELTSSAPACYALAISPDGKVCFSCCSDGNIAVWDLHNQTLVRQ 1513
Query: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW 247
GHT + + +SPDG+ +GG D WDL EG+ L D I +L + P W
Sbjct: 1512 FQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYCPTGEW 1333
Query: 248 L 248
L
Sbjct: 1332 L 1330
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -3
Query: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
+ IS DG+ S DG + +WDL T R+F GHT + S D ++ +G D T
Sbjct: 1608 LAISPDGKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISPDGTKLWTGGLDNT 1429
Query: 129 IKLWN 133
++ W+
Sbjct: 1428 VRSWD 1414
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 4/154 (2%)
Frame = -3
Query: 28 PD--MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 85
PD + S D I +W L R +GH+ S + IS DG +G D
Sbjct: 1596 PDGKVCFSCCSDGNIAVWDLHNQTL-----VRQFQGHTDGASCIDISPDGTKLWTGGLDN 1432
Query: 86 TLRLWDLTTGTTTRRFVGH--TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ 143
T+R WDL G R+ H + + S+ + + G +++ + KY Q
Sbjct: 1431 TVRSWDLREG---RQLQQHDFSSQIFSLGYCPTGEWLAVGMESSNVEVLHHSKPDKY--Q 1267
Query: 144 DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
H V ++F+ VS G D L+ W
Sbjct: 1266 LHLHESCVLSLKFA--YCGKWFVSTGKDNLLNAW 1171
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -3
Query: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
++ IWDL +K E+ S++ P C +LA S DG+ F+ +D + VW +
Sbjct: 1689 TLSIWDLATP--TPRIKAELTSSA-----PACYALAISPDGKVCFSCCSDGNIAVWDL 1537
>02960
Length = 1577
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 38/270 (14%)
Frame = +2
Query: 79 LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF-----SSDNRQIVSGSRDKTIKLW- 132
LSGS+D T+RLW T G GHT V VA+ SS V+GS D+T +W
Sbjct: 527 LSGSYDNTVRLWS-TKGEAIMTIPGHTSPVKCVAWIKHDESSGVSTFVTGSHDQTALVWQ 703
Query: 133 ---NTLGV-CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
T V C+ + + H+ V CV SP+S + + WDK++K+W+ +C + +
Sbjct: 704 WQRETNEVDCRLSCR--GHAASVDCVAVSPDSQQ--MCTGSWDKMLKLWS-TDCNVDGDQ 868
Query: 189 IGHT------------------------GYLNTVTVSP--DGSLCASGGKDGQAMLWDLN 222
T G+ V+ D + D LWDL+
Sbjct: 869 SEDTERPSKKKKSAKSTTQTRVPVLTLSGHAEAVSAVRWLDPHRVVTSSWDHSLRLWDLH 1048
Query: 223 EGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQ-EVISTSSKA 281
+ + G + + +SP + L + D +++ + E + + +
Sbjct: 1049TAQQTSLIQGSKAVLDVAYSPLSHMLITGSA------DRHVRLVDPRCSEGETVKCAFTS 1210
Query: 282 EPPQCTSLAWSADGQTLF-AGYTDNLVRVW 310
T + WS + LF +G DN++++W
Sbjct: 1211HTGWVTGVDWSPTREHLFLSGSYDNVLKLW 1300
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Frame = +2
Query: 31 ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 90
++ S D+T ++W+ R ETN + + RGH+ V V +S D Q +GSWD L+LW
Sbjct: 662 FVTGSHDQTALVWQWQR-ETNEVDCRLSCRGHAASVDCVAVSPDSQQMCTGSWDKMLKLW 838
Query: 91 D----------------------LTTGTTTRRFV----GHTKDVLSVAFSSDNRQIVSGS 124
+ T TR V GH + V +V + D ++V+ S
Sbjct: 839 STDCNVDGDQSEDTERPSKKKKSAKSTTQTRVPVLTLSGHAEAVSAVRW-LDPHRVVTSS 1015
Query: 125 RDKTIKLWNTLGVCKYTVQDES---HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
D +++LW+ +T Q S S+ V V +SP S ++++ D+ V++ +
Sbjct: 1016WDHSLRLWDL-----HTAQQTSLIQGSKAVLDVAYSPLSH--MLITGSADRHVRLVD-PR 1171
Query: 182 CK----LKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGK 225
C +K HTG++ V SP L SG D LWD K
Sbjct: 1172CSEGETVKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPK 1318
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 43
+E T++ H GWVT + +P + LS S D + +W
Sbjct: 1175 SEGETVKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLW 1300
>11493
Length = 535
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
Frame = -2
Query: 53 GIPQRALR----GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT-----TGTTTRRFVG 103
GIP+ A + H V V IS+ ++ +G G +++WD++ + +
Sbjct: 519 GIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG-KGCVKVWDISQPGNKNPVSQLDCLQ 343
Query: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
+ SV D R ++ G + +W+ L ++ E S +C + + +
Sbjct: 342 RDNYIRSVKLLPDGRTLIVGGEASNLSIWD-LASPTPRIKAELTSAAPACYALAISPDSK 166
Query: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD 213
+ SC D + VW+L N L GHT + + +SPDGS +GG D
Sbjct: 165 VCFSCCSDGNIAVWDLHNEILVRQFQGHTDGASCIDISPDGSRLWTGGLD 16
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -2
Query: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
+ IS D + S DG + +WDL R+F GHT + S D ++ +G D T
Sbjct: 189 LAISPDSKVCFSCCSDGNIAVWDLHNEILVRQFQGHTDGASCIDISPDGSRLWTGGLDNT 10
Query: 129 IK 130
++
Sbjct: 9 VR 4
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = -2
Query: 185 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL------NEGKHLYTLDGGDIINA 238
+ N + H + VT+S +GGK G +WD+ N L L + I +
Sbjct: 498 QINTLSHGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQPGNKNPVSQLDCLQRDNYIRS 322
Query: 239 LCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
+ P+ R + ++ IWDL +K E+ S + P C +LA S D +
Sbjct: 321 VKLLPDGRTLIVGGEASNLSIWDLASP--TPRIKAELTSAA-----PACYALAISPDSKV 163
Query: 298 LFAGYTDNLVRVWQV 312
F+ +D + VW +
Sbjct: 162 CFSCCSDGNIAVWDL 118
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Frame = -2
Query: 40 IIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR 99
+ +W +++ + Q +++ V + DG+ + G L +WDL + T
Sbjct: 408 VKVWDISQPGNKNPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRI 229
Query: 100 R--FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFS 157
+ ++A S D++ S D I +W+ L Q + H++ SC+ S
Sbjct: 228 KAELTSAAPACYALAISPDSKVCFSCCSDGNIAVWD-LHNEILVRQFQGHTDGASCIDIS 52
Query: 158 PNSS 161
P+ S
Sbjct: 51 PDGS 40
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Frame = -2
Query: 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE----SHSEWVSCVRFS 157
+ H + V +V S+ + + +G + +K+W+ + ++ V+
Sbjct: 486 LSHGEVVCAVTISNPTKYVYTGGK-GCVKVWDISQPGNKNPVSQLDCLQRDNYIRSVKLL 310
Query: 158 PNSSNPIIVSCGWDKLVKVWNLANC--KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ 215
P+ I+ G + +W+LA+ ++K + +SPD +C S DG
Sbjct: 309 PDGRTLIVG--GEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSCCSDGN 136
Query: 216 AMLWDLNE 223
+WDL+
Sbjct: 135 IAVWDLHN 112
>13278
Length = 870
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +1
Query: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
S S+D T+RLW++ G H + V SVAFS D + + SGS DK + +WN
Sbjct: 127 SASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 288
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Frame = +1
Query: 23 TTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS 82
+ P ++ SAS D T+ +W++ R G+ L H V V S DG++ SGS
Sbjct: 97 SNPNTSLILASASFDSTVRLWEVER-----GLCLHTLTKHQEPVYSVAFSPDGKYLASGS 261
Query: 83 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
+D + +W++ TG+ + G T + V ++ ++ + + D ++
Sbjct: 262 FDKCVHIWNVQTGSLVHSYKG-TGGIFEVCWNHRGDKVGASASDGSV 399
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +1
Query: 158 PNSSNP----IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD 213
P +SNP I+ S +D V++W + H + +V SPDG ASG D
Sbjct: 88 PGTSNPNTSLILASASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYLASGSFD 267
Query: 214 GQAMLWDLNEGKHLYTLDGGDIINALCFS 242
+W++ G +++ G I +C++
Sbjct: 268 KCVHIWNVQTGSLVHSYKGTGGIFEVCWN 354
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
A+ ++++W++E + + L + EP S+A+S DG+ L +G D V +
Sbjct: 130 ASFDSTVRLWEVERGLCLHTLTKH-------QEP--VYSVAFSPDGKYLASGSFDKCVHI 282
Query: 310 WQVTIGT 316
W V G+
Sbjct: 283 WNVQTGS 303
>21105
Length = 650
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +1
Query: 79 LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN---TL 135
++ D +R +D TG V H V S+A + ++SGS D +I+LWN
Sbjct: 112 ITAHEDRHIRFFDNNTGKLIHAMVAHLDSVTSLAVDPNGLYLLSGSHDCSIRLWNLDSKT 291
Query: 136 GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
V + T + E + V F P P I S G D L KV+
Sbjct: 292 CVQEITSHRKKFDESIHDVAFHPQ--KPYIASAGADALAKVF 411
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +1
Query: 25 PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 84
P P + ++A D+ I + + N G A+ H V+ + + +G + LSGS D
Sbjct: 94 PTMP-ITITAHEDRHIRFF-----DNNTGKLIHAMVAHLDSVTSLAVDPNGLYLLSGSHD 255
Query: 85 GTLRLWDLTTGTTTRRFVGHTK----DVLSVAFSSDNRQIVSGSRDKTIKLW 132
++RLW+L + T + H K + VAF I S D K++
Sbjct: 256 CSIRLWNLDSKTCVQEITSHRKKFDESIHDVAFHPQKPYIASAGADALAKVF 411
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = +1
Query: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
PI ++ D+ ++ ++ KL + H + ++ V P+G SG D LW+L+
Sbjct: 103 PITITAHEDRHIRFFDNNTGKLIHAMVAHLDSVTSLAVDPNGLYLLSGSHDCSIRLWNLD 282
Query: 223 EG-------KHLYTLDGGDIINALCFSPNRYWLCAA 251
H D I+ + F P + ++ +A
Sbjct: 283 SKTCVQEITSHRKKFDES--IHDVAFHPQKPYIASA 384
>37180
Length = 681
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT-TGTTTRRFVGHTKDVLSVAFSSD 116
L GH +SDV + ++ S D T RLWD + F GHT+ V S F+S
Sbjct: 4 VLNGHDQELSDVHAHPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSAVFASG 183
Query: 117 NRQIVSGSRDKTIKLWN 133
++ +VSGS D+T+++W+
Sbjct: 184 DK-VVSGSDDRTVRVWD 231
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +1
Query: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
L GH+ ++ + P +++++S+D T +W D + + +GH+ V+ V
Sbjct: 7 LNGHDQELSDVHAHPT-QRLVVTSSKDMTFRLW----DFRDSALLVNVFQGHTQPVTSAV 171
Query: 71 ISSDGQFALSGSWDGTLRLWDL 92
+S G +SGS D T+R+WD+
Sbjct: 172FAS-GDKVVSGSDDRTVRVWDM 234
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI--INALCFSPNRYW 247
GH L+ V P L + KD LWD + L + G + + F+
Sbjct: 13 GHDQELSDVHAHPTQRLVVTSSKDMTFRLWDFRDSALLVNVFQGHTQPVTSAVFASGDKV 192
Query: 248 LCAATGPSIKIWDLEG 263
+ + ++++WD+
Sbjct: 193 VSGSDDRTVRVWDMRN 240
>19498
Length = 903
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 30/201 (14%)
Frame = -1
Query: 40 IIMWKLT-----RDETNYGIPQRALRGHSHF--VSDVVISSDGQFALSGSWDGTLRLWDL 92
+++W + ++E + +P+ + SH V+ V S +G+F SG D + +W +
Sbjct: 876 VVIWNMAPIRDEKEEADDDVPRVLCQMDSHLGCVNCVRWSENGKFLASGGDDKLIMIWQI 697
Query: 93 TTGTTTRR-----------------FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL 135
+ G + + GH DVL +A+S + + S S D TI +WN L
Sbjct: 696 SRGFGSGKSFGSNVTILEHWRSVATLRGHAGDVLDLAWSPQDLWLASCSVDNTIVVWNAL 517
Query: 136 GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT------NHI 189
+ H+ V V + P + S DK ++VW ++ K +T
Sbjct: 516 KFSEQVAVIRGHAGMVKGVTWDP--VGRYLASQSDDKTLRVWRTSDWKEETCVKSCFKEC 343
Query: 190 GHTGYLNTVTVSPDGSLCASG 210
G T ++ + SPDG+ S
Sbjct: 342 GGTTHVLRLNWSPDGNHVVSA 280
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Frame = -1
Query: 9 GTLKGHNGWVTQIATTPQFPDMIL-SASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS 67
TL+GH G V +A +PQ D+ L S S D TI++W + + +RGH+ V
Sbjct: 627 ATLRGHAGDVLDLAWSPQ--DLWLASCSVDNTIVVWNALKFSEQVAV----IRGHAGMVK 466
Query: 68 DVVISSDGQFALSGSWDGTLRLW------DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
V G++ S S D TLR+W + T + + G T VL + +S D +V
Sbjct: 465 GVTWDPVGRYLASQSDDKTLRVWRTSDWKEETCVKSCFKECGGTTHVLRLNWSPDGNHVV 286
Query: 122 SG 123
S
Sbjct: 285 SA 280
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 20/143 (13%)
Frame = -1
Query: 191 HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG-----------------KHLYTLDG- 232
H G +N V S +G ASGG D M+W ++ G + + TL G
Sbjct: 789 HLGCVNCVRWSENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHWRSVATLRGH 610
Query: 233 -GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIV-DELKQEVISTSSKAEPPQCTSLA 290
GD+++ L +SP WL + + ++ I+V + LK + +
Sbjct: 609 AGDVLD-LAWSPQDLWLASCS--------VDNTIVVWNALKFSEQVAVIRGHAGMVKGVT 457
Query: 291 WSADGQTLFAGYTDNLVRVWQVT 313
W G+ L + D +RVW+ +
Sbjct: 456 WDPVGRYLASQSDDKTLRVWRTS 388
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
WS +G+ L +G D L+ +WQ++ G
Sbjct: 762 WSENGKFLASGGDDKLIMIWQISRG 688
>17266
Length = 480
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Frame = -1
Query: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
++ D + +SG+ D + +LWD+ G + F GH D+ ++ + + +GS D T +
Sbjct: 435 LAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDATCR 256
Query: 131 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL-VKVWNLANCKLKTNHI 189
L++ + SH + + S + ++ G+D +W++ +
Sbjct: 255 LFDIRA--DQEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIWDVLKQERTGVLA 82
Query: 190 GHTGYLNTVTVSPDGSLCASG 210
GH ++ + V+ DGS A+G
Sbjct: 81 GHDNRVSCLGVTEDGSAVATG 19
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Frame = -1
Query: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATG--- 253
++++PD SG D A LWD+ +G T G + INA+ + PN + ATG
Sbjct: 441 LSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAF--ATGSDD 268
Query: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
+ +++D+ QE+ S TS+A+S G+ L GY D +W V
Sbjct: 267 ATCRLFDIRA-------DQEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIWDV 112
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = -1
Query: 165 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
VS D K+W++ + K GH +N +T P+G A+G D L+D+
Sbjct: 414 FVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDATCRLFDIRAD 235
Query: 225 KHLYTLDGGDI---INALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQE 273
+ + +I I ++ FS + R L + IWD+ LKQE
Sbjct: 234 QEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNIWDV--------LKQE 100
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Frame = -1
Query: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
VLS+A D R VSG+ D + KLW+ G+CK T H ++ + + PN
Sbjct: 444 VLSLA--PDMRTFVSGACDASAKLWDVRDGMCKQTFS--GHESDINAITYFPNGH---AF 286
Query: 167 SCGWDKLVKVWNLANCKL----KTNHIGHTGYLN------TVTVSPDGSLCASGGKDGQA 216
+ G D A C+L IG + N +V S G L G D
Sbjct: 285 ATGSDD-------ATCRLFDIRADQEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNC 127
Query: 217 MLWDLNEGKHLYTLDGGD 234
+WD+ + + L G D
Sbjct: 126 NIWDVLKQERTGVLAGHD 73
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Frame = -1
Query: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV--- 66
T GH + I P + S D T ++ + D+ + + H + +
Sbjct: 348 TFSGHESDINAITYFPN-GHAFATGSDDATCRLFDIRADQ------EIGMYSHDNIICGI 190
Query: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
+ V S G+ L G D +WD+ T GH V + + D + +GS D
Sbjct: 189 TSVAFSKSGRLLLGGYDDFNCNIWDVLKQERTGVLAGHDNRVSCLGVTEDGSAVATGSWD 10
Query: 127 KTI 129
+
Sbjct: 9 SFL 1
>01768
Length = 1424
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 13/129 (10%)
Frame = +3
Query: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI----GHTGYLNTVTVS 201
+H++ V V++SPN N + SC D+ +++WN K N + H+ +N + +
Sbjct: 831 AHTDSVEDVQWSPNEGN-VFASCSVDRTLRIWNTQQKPSKANVLTVPEAHSRDINVINWN 1007
Query: 202 P-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI------INALCFSPNRYWLCAATGP 254
P + L ASGG DG +WDL ++ + +L ++P + AA+G
Sbjct: 1008PIEKHLLASGGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPVTSLEWNPQDSSVLAASGE 1187
Query: 255 --SIKIWDL 261
I IWD
Sbjct: 1188DDQITIWDF 1214
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Frame = +3
Query: 93 TTGTTTRR--FVGHTKDVLSVAFSSDNRQI-VSGSRDKTIKLWNTL---GVCKYTVQDES 146
++G TT + + HT V V +S + + S S D+T+++WNT E+
Sbjct: 795 SSGWTTEKSSYAAHTDSVEDVQWSPNEGNVFASCSVDRTLRIWNTQQKPSKANVLTVPEA 974
Query: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP---- 202
HS ++ + ++P + ++ S G D ++K+W+L + K + L++ V+
Sbjct: 975 HSRDINVINWNPIEKH-LLASGGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPVTSLEWN 1151
Query: 203 --DGSLCASGGKDGQAMLWDLN 222
D S+ A+ G+D Q +WD +
Sbjct: 1152PQDSSVLAASGEDDQITIWDFS 1217
>01249
Length = 1743
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 116/299 (38%), Gaps = 14/299 (4%)
Frame = -1
Query: 31 ILSASRDKTII-MWKLTR-DETNYGI--PQRALRGHSHFVSDVVISSDGQFALSGSWDGT 86
+L A+++K +I +W L++ DE+ + I P + VS +V+S DG F L+ S
Sbjct: 1575 LLGAAQNKPVIHVWPLSKKDESQHKIVCPGK--------VSVLVVSPDGLFCLA-SISEK 1423
Query: 87 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-- 144
+ +W++T G+ + + + F+ D Q V + + +W+ V T Q
Sbjct: 1422 IYIWEMTGGSLVG-LLSDFNEATKIQFTDDGSQFVVATSSGHLNIWDFARVVTTTSQRAR 1246
Query: 145 --------ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLN 196
+HSE ++ + + S D K+W++ + L + TG
Sbjct: 1245 GLKPGRTINAHSEPITGLHVGCGGPAARVASSSSDGTCKLWDMLSGALLRTMVYETGV-- 1072
Query: 197 TVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSI 256
++ D E L LD GDI LC+ I
Sbjct: 1071 ------------------GCLIMDKQEHFLLAGLDNGDI------------LCSPLFGQI 982
Query: 257 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
+ ++ V + + + T LA+S+DGQ L +G + V +W + G
Sbjct: 981 S----QSEVFVSKHTTKAGERVLQGHSDAVTCLAFSSDGQRLASGSQNGKVIIWNMESG 817
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = -1
Query: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT 98
+R L+GHS V+ + SSDGQ SGS +G + +W++ +G +T
Sbjct: 936 ERVLQGHSDAVTCLAFSSDGQRLASGSQNGKVIIWNMESGDST 808
>26107
Length = 1338
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 97/265 (36%), Gaps = 23/265 (8%)
Frame = -3
Query: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVA-FSSDNRQIVSGSRDKTI 129
IS+D Q L+ S D T+ LWD+ T T F+GH V SVA S Q SG+RD I
Sbjct: 1060 ISNDSQ-CLTASGDQTVALWDVETTTKVTTFIGHKCSVRSVASCPSSPAQCASGARDGHI 884
Query: 130 KLWNTLGVCKYTVQDESHSEWV---SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
LW++ K Q S V S + P I + G ++ C
Sbjct: 883 MLWDSRVNKKREHQPCSQVHQVCPQSGHQSKPAKHRRIHRAAGPKGVMDTQQSVTC---- 716
Query: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD------------------LNEGKHLY 228
V D + +SG DG +WD + H+
Sbjct: 715 -----------VLYQTDNLIISSGANDGCVKMWDTRKWYTNTTTSLPVPVHTFDYPGHMR 569
Query: 229 TLDGGDIINALCFSPNRYWLCAA-TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCT 287
L G I +C P + L + T + + L G+ QE + + +
Sbjct: 568 RLKG---IVTMCMDPWKSQLFVSYTDNKVYRYQLAGQY---REPQEYVYAGHRND-TFFV 410
Query: 288 SLAWSADGQTLFAGYTDNLVRVWQV 312
A S DG+ L +G N +W+V
Sbjct: 409 RCAISPDGKYLLSGSGRNTGVIWEV 335
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Frame = -3
Query: 51 NYGIPQRALR-GHSH--FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTK 106
Y PQ + GH + F IS DG++ LSGS T +W++ F +GHT+
Sbjct: 469 QYREPQEYVYAGHRNDTFFVRCAISPDGKYLLSGSGRNTGVIWEVDKPNKRPLFLIGHTE 290
Query: 107 DVLSVAF-SSDNRQIVSGSRDKTIKLW 132
DV +V + S+D ++ + S D+++++W
Sbjct: 289 DVSAVDWCSTDVCKLATVSDDRSLRIW 209
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 86/239 (35%), Gaps = 18/239 (7%)
Frame = -3
Query: 3 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGH 62
E T T GH V +A+ P P S +RD I++W R +
Sbjct: 997 ETTTKVTTFIGHKCSVRSVASCPSSPAQCASGARDGHIMLWD-----------SRVNKKR 851
Query: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
H V Q SG + + + + + V V + +DN I S
Sbjct: 850 EHQPCSQVHQVCPQ---SGHQSKPAKHRRIHRAAGPKGVMDTQQSVTCVLYQTDNLIISS 680
Query: 123 GSRDKTIKLWNT----------LGVCKYTVQDESHSEWVSCVR---FSPNSSNPIIVSCG 169
G+ D +K+W+T L V +T H + + P S + VS
Sbjct: 679 GANDGCVKMWDTRKWYTNTTTSLPVPVHTFDYPGHMRRLKGIVTMCMDPWKSQ-LFVSYT 503
Query: 170 WDKLVKVWNLANCKLKTNHIGHTGYLN-----TVTVSPDGSLCASGGKDGQAMLWDLNE 223
+K+ + + LA + + G+ N +SPDG SG ++W++++
Sbjct: 502 DNKVYR-YQLAGQYREPQEYVYAGHRNDTFFVRCAISPDGKYLLSGSGRNTGVIWEVDK 329
>19140
Length = 573
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = -3
Query: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
L+GH+ V +V++ DG LSGS DGT+RLW L F H + V ++ +
Sbjct: 499 LKGHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANESFT 320
Query: 119 QIVSGSRDKTI 129
+ SG RD +
Sbjct: 319 TLYSGGRDHQV 287
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
GHT + + ++ DG+ C SG DG LW L + + + T
Sbjct: 493 GHTDNVKALVLNRDGTQCLSGSSDGTIRLWSLGQQRCVATF 371
>33180
Length = 460
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -2
Query: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
HS + ++ SSD + G+ DG L ++D + T + H DV +VAF+ D+ QI+
Sbjct: 456 HSFCIFSLMFSSDNTEIVGGANDGCLYVYDRESNQRTLKIDAHDDDVNAVAFADDSSQIL 277
Query: 122 -SGSRDKTIKLWN 133
SG D K+W+
Sbjct: 276 YSGGDDGLCKVWD 238
>01462
Length = 995
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +2
Query: 31 ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 90
+ + + D+ I +W + G A+ GH ++ VV+ +D Q +S S DGT+R+W
Sbjct: 242 LYAGAGDRKIHVWDI-----EAGQYLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMW 406
Query: 91 DLTTGTTTRRFVGHTKDVL 109
D+ + T T + +K+ L
Sbjct: 407 DIRSSTETVHCLEPSKNEL 463
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 12/104 (11%)
Frame = +2
Query: 171 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH-LYT 229
D+ + VW++ + GH Y++ V + D C S +DG +WD+ ++
Sbjct: 260 DRKIHVWDIEAGQYLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMWDIRSSTETVHC 439
Query: 230 LDG-----------GDIINALCFSPNRYWLCAATGPSIKIWDLE 262
L+ G + L P WL GP + W L
Sbjct: 440 LEPSKNELCSRPLLGKWLRCLALDPEEGWLVCGGGPKLSAWHLR 571
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 68/189 (35%), Gaps = 3/189 (1%)
Frame = +2
Query: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
+G+ D + +WD+ G GH + V +D ++ VS S D T+++W+
Sbjct: 248 AGAGDRKIHVWDIEAGQYLNAMEGHKDYIHKVVMKNDAQECVSASEDGTVRMWDI----- 412
Query: 140 YTVQDESHSEWVSCVRFSPNS--SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
S +E V C+ S N S P++ +L
Sbjct: 413 -----RSSTETVHCLEPSKNELCSRPLL--------------------------GKWLRC 499
Query: 198 VTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSI 256
+ + P +G L GG A W L D + + + + L A T P +
Sbjct: 500 LALDPEEGWLVCGGGPKLSA--WHLRTLAPTTIFDTPSVSQNVALFHDEFILSAGTSPVM 673
Query: 257 KIWDLEGKI 265
W L+G +
Sbjct: 674 NHWRLDGTL 700
>19863
Length = 502
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
DG +SGS D ++ +WD+ G R GH V V FS D ++S S D T+++WN
Sbjct: 4 DGLQLVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWN 183
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Frame = +1
Query: 31 ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 90
++S S D +I++W + G+ + L+GH+ +V+DV S D + LS S D T+R+W
Sbjct: 16 LVSGSSDMSIVVW-----DVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIW 180
Query: 91 DLTTGTTTRRFVGHTK 106
++ + H +
Sbjct: 181 NIEESDQIPIVMEHKR 228
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 165 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
+VS D + VW++ N K GH G++N V S D S D +W++ E
Sbjct: 16 LVSGSSDMSIVVWDVENGVQKLRLQGHAGWVNDVHFSQDQCWLLSCSNDNTVRIWNIEES 195
Query: 225 KHL 227
+
Sbjct: 196 DQI 204
>26939
Length = 388
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 75 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
G++ +S S D T+R+WDL + H S+ F + ++SGS D+T+K+W
Sbjct: 2 GKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 178
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 31 ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 90
++SAS DKTI +W L + L H HF + + + +SGS D T+++W
Sbjct: 11 LVSASDDKTIRVWDLRNKRC-----MKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 175
Query: 91 D 91
+
Sbjct: 176E 178
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 118 RQIVSGSRDKTIKLWNTLGV-CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
+ +VS S DKTI++W+ C T+ H C + ++P ++S D+ VKV
Sbjct: 5 KYLVSASDDKTIRVWDLRNKRCMKTLYAHQH----FCTSIDFHKAHPYVISGSVDQTVKV 172
Query: 177 WN 178
W
Sbjct: 173 WE 178
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +2
Query: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 304
+Y + A+ +I++WDL K + L A CTS+ + + +G D
Sbjct: 5 KYLVSASDDKTIRVWDLRNKRCMKTLY---------AHQHFCTSIDFHKAHPYVISGSVD 157
Query: 305 NLVRVWQ 311
V+VW+
Sbjct: 158 QTVKVWE 178
>30295
Length = 593
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Frame = +2
Query: 97 TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRF 156
T R H + ++ +++D+R +VS S+D + +W+ K S WV +
Sbjct: 221 TRRTLRXHLAKIYAMHWATDSRNLVSASQDGKLIVWDGYTTNKVHAI-PLRSSWVMTCAY 397
Query: 157 SPNSSNPIIVSCGWDKLVKVWNL----ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
+P S + G D + +++L N ++ GHTGYL+ D + S G
Sbjct: 398 AP--SGGYVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFIDDNQIVTSSG- 568
Query: 213 DGQAMLWD 220
D LWD
Sbjct: 569 DMTCALWD 592
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Frame = +2
Query: 4 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 63
QM R TL+ H + + +++ SAS+D +I+W + IP R S
Sbjct: 212 QMRTRRTLRXHLAKIYAMHWATDSRNLV-SASQDGKLIVWDGYTTNKVHAIPLR-----S 373
Query: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT----TTRRFVGHTKDVLSVAFSSDNRQ 119
+V + G + G D ++ L T +R GHT + F DN Q
Sbjct: 374 SWVMTCAYAPSGGYVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFIDDN-Q 550
Query: 120 IVSGSRDKTIKLWN 133
IV+ S D T LW+
Sbjct: 551 IVTSSGDMTCALWD 592
>04088
Length = 511
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV--AFSSDNRQIVSG 123
V+ V + DGQ +L S D T+RL D TG F GH + ++++ +VSG
Sbjct: 39 VTSVTFTRDGQCSLVSSQDNTVRLMDKDTGEMLNEFTGHKHSQYKIDSCLNNEDTLVVSG 218
Query: 124 SRDKTIKLWN 133
S D + W+
Sbjct: 219 SEDGKVYFWD 248
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 191 HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI--INALCFSPNRYWL 248
H+ Y ++ + +L SG +DG+ WDL E K + TLD +++L F L
Sbjct: 159 HSQYKIDSCLNNEDTLVVSGSEDGKVYFWDLVEAKLVDTLDHKTTRPVHSLSFHHAELCL 338
Query: 249 CAATGPSIKIW 259
A + +W
Sbjct: 339 MTACADKVFLW 371
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +3
Query: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
L +S+D T+ +L +T + + HS + D ++++ +SGS DG + WD
Sbjct: 78 LVSSQDNTV---RLMDKDTGEMLNEFTGHKHSQYKIDSCLNNEDTLVVSGSEDGKVYFWD 248
Query: 92 LTTGTTTRRFVGH--TKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
L + H T+ V S++F +++ DK LW +
Sbjct: 249 LVEAKLVDT-LDHKTTRPVHSLSFHHAELCLMTACADKVF-LWRS 377
>15780
Length = 735
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -1
Query: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
D T+ +WD+ +GT HT V ++ FS D + SG D +I+LW+
Sbjct: 711 DHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMDNSIRLWD 562
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -1
Query: 167 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
+ G D V VW++A+ + HT + + S DG++ ASGG D LWDL
Sbjct: 723 TAGADHTVIVWDIASGTAVAHLTAHTDTVYALCFSRDGTVLASGGMDNSIRLWDL 559
>01598
Length = 1545
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Frame = +1
Query: 30 MILSASRDKTIIMWKLTRDETNY--GIP-QRALRGH--SHFVSDVVI---SSDGQFALSG 81
+I + S+D+TI +W L++ + + +P QR G S F + I S+ + +S
Sbjct: 106 LIATGSKDRTIRVWTLSQGKQIFMKKLPNQRREAGDTGSRFKVWLAIHWLKSNPEQLVSS 285
Query: 82 SWDGTLRLWDL--TTGTTTRRFV-----GHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWN 133
S G L LW L T G + F H + V ++ S D++ + + ++D+ + LW+
Sbjct: 286 SSGGDLLLWSLRYTKGQAYQTFQTSDYRPHMRPVFNICASGPDSKTLCTFAQDRQVVLWD 465
Query: 134 TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
L + + V CVR SP + V G D +++ WN++N KTN
Sbjct: 466 -LETMEAVASMATLGGHVYCVRTSPIDPGRVAVGVG-DSMIRTWNMSN---KTN 612
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 57 RALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
R L GHS V+D+ S L S +D +WD+ GT +F GH +L+ FS
Sbjct: 1282 RELSGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSG 1461
Query: 116 -DNRQIVSGSRDKTIKLWN 133
D +++G D ++ +W
Sbjct: 1462 LDPDLVMTGGSDASVHVWR 1518
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGS 205
HS+ V+ + +SP+ + +VS G+D VW++ GH G L T S D
Sbjct: 1297 HSQRVTDMSWSPHH-DARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSGLDPD 1473
Query: 206 LCASGGKDGQAMLWDLNE 223
L +GG D +W +++
Sbjct: 1474 LVMTGGSDASVHVWRVSQ 1527
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 204 GSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIW 259
G L A+G KD +W L++GK ++ + PN+ TG K+W
Sbjct: 100 GCLIATGSKDRTIRVWTLSQGKQIF----------MKKLPNQRREAGDTGSRFKVW 237
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 26/171 (15%)
Frame = +1
Query: 120 IVSGSRDKTIKLWNTLGVCKYTVQDESHSE-------------WVSCVRFSPNSSNPIIV 166
I +GS+D+TI++W TL K + ++ W++ N +
Sbjct: 109 IATGSKDRTIRVW-TLSQGKQIFMKKLPNQRREAGDTGSRFKVWLAIHWLKSNPEQLVSS 285
Query: 167 SCGWDKLVKVWNLANCKLKTNHIGHTG--------YLNTVTVSPDGSLCASGGKDGQAML 218
S G D L +W+L K + T N PD + +D Q +L
Sbjct: 286 SSGGDLL--LWSLRYTKGQAYQTFQTSDYRPHMRPVFNICASGPDSKTLCTFAQDRQVVL 459
Query: 219 WDLNEGKHLYTLD--GGDI--INALCFSPNRYWLCAATGPS-IKIWDLEGK 264
WDL + + ++ GG + + P R + G S I+ W++ K
Sbjct: 460 WDLETMEAVASMATLGGHVYCVRTSPIDPGR--VAVGVGDSMIRTWNMSNK 606
>15118
Length = 1074
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 90/222 (40%), Gaps = 5/222 (2%)
Frame = +3
Query: 43 WKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF- 101
+KL ++G R + V ISS G + G G L +++L +G F
Sbjct: 12 YKLDCKRFHHGAQHRFTTAQA-----VDISSCGNYVAVGYSSGHLDIYNLQSGKHRGSFG 176
Query: 102 --VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFS 157
V H V VAF + N +++ D IK W + + +++ SE +S +
Sbjct: 177 DTVAHVSGVRGVAFDAFNCLLITAGGDCDIKFWRFGSRDRARVLLKELKMSEGISRILLH 356
Query: 158 PNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAM 217
+S+ +V D V V ++ ++ GH+ + ++ S DG + D
Sbjct: 357 RDSNMLAVVL--EDFTVSVIDVDTLRVVRVFSGHSNSITDLSFSGDGRWLITASMDCTVR 530
Query: 218 LWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIW 259
W L G+ + + +L SP++ +L + + ++
Sbjct: 531 TWSLVHGRLIDCFAVEAAVTSLTMSPSQDFLATSHVGDVGVY 656
>16105
Length = 960
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Frame = -2
Query: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN-------HIGHTGYLNTVT 199
H V +++ P++ N +I S D VKVW + + L TN +GH +
Sbjct: 578 HKGAVLDIQWCPHNDN-VIASASDDCTVKVWQIPDSGLVTNLTDPVVDLVGHQKRCCLIV 402
Query: 200 VSPDG-SLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPSIK 257
P ++ S G D + + W++ G+ + +D D+I + F+ N L C ++
Sbjct: 401 WHPSAQNVLVSAGADNKILFWNVGTGEPMLEVDVPDMIYCMSFNFNGSRLVCTCKDKKLR 222
Query: 258 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
I D ++ E K A+P Q L DG+ G++
Sbjct: 221 IIDSHSGAVLKEGK-----CHDGAKPAQACYL---KDGKVFTTGFS 108
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Frame = -2
Query: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRD--ETNYGIPQRALRGHSHFVSD 68
+ GH G V I P ++I SAS D T+ +W++ TN P L GH
Sbjct: 587 VAGHKGAVLDIQWCPHNDNVIASASDDCTVKVWQIPDSGLVTNLTDPVVDLVGHQKRCCL 408
Query: 69 VVISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
+V Q L S D + W++ TG V + ++F+ + ++V +DK
Sbjct: 407 IVWHPSAQNVLVSAGADNKILFWNVGTGEPMLE-VDVPDMIYCMSFNFNGSRLVCTCKDK 231
Query: 128 TIKLWNT 134
+++ ++
Sbjct: 230 KLRIIDS 210
>14555
Length = 627
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Frame = -3
Query: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
D L + D T+ +W + G+ L GH + VS + IS DG +GSWD TLR
Sbjct: 427 DCCLGVTNDYTVNVWDALK-----GMRSTILYGHDNRVSCLRISPDGTSLCTGSWDYTLR 263
Query: 89 LWDLTTGTTTRRFVGHTKDVLSVAF 113
+W R GH+ +++ +
Sbjct: 262 IW------A*ERERGHSSNIIRITL 206
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3
Query: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLW 132
D T+ +WD G + GH V + S D + +GS D T+++W
Sbjct: 403 DYTVNVWDALKGMRSTILYGHDNRVSCLRISPDGTSLCTGSWDYTLRIW 257
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = -2
Query: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDII---NALCFS 242
GH +N V P G A+G D L+DL + + II NA+ FS
Sbjct: 605 GHEADINCVRFYPSGDAFATGSDDATCRLFDLRADREVNCYRKESIIFGCNAVDFS 438
>21921
Length = 1341
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -1
Query: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN 244
GHTG + ++ P G SG DG W+++ G+ + TL G + ++ ++PN
Sbjct: 489 GHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVSSGRCMKTLQVGGCVTSVAWNPN 325
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1
Query: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
+GH+ V + GQ+ +SGS DGT+R W++++G
Sbjct: 492 KGHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVSSG 385
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -1
Query: 91 DLTTGTTTRRFV--GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQ 143
DL TT+ V GHT V S+ + +VSGS D TI+ W + G C T+Q
Sbjct: 531 DLRPFPTTQALVYKGHTGIVRSICPDPTGQWLVSGSDDGTIRFWEVSSGRCMKTLQ 364
>31384
Length = 474
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
F +SGSWD + W++ T + HT VL V +S D ++ + S DKT K+W+
Sbjct: 225 FLISGSWDNKVSCWEVQQSGQTIPKAQQTHTGPVLDVDWSDDGTKVFTASCDKTAKVWD 49
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -1
Query: 151 VSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANC--KLKTNHIGHTGYLNTVTVSPDGSLC 207
VSC++FSP + + ++S WD V W + + HTG + V S DG+
Sbjct: 267 VSCLKFSPGALPSTFLISGSWDNKVSCWEVQQSGQTIPKAQQTHTGPVLDVDWSDDGTKV 88
Query: 208 ASGGKDGQAMLWDLNEGKHL 227
+ D A +WDLN + +
Sbjct: 87 FTASCDKTAKVWDLNSNQCM 28
>10264
Length = 416
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = -1
Query: 57 RALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
R L GHS V+D+ S L S +D +WD+ GT +F GH +L+ FS
Sbjct: 263 RELSGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSG 84
Query: 116 -DNRQIVSGSRDKTIKLWNT 134
D +++G D ++ +W
Sbjct: 83 LDPDLVMTGGSDASVHVWRV 24
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -1
Query: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGS 205
HS+ V+ + +SP+ + +VS G+D VW++ GH G L T S D
Sbjct: 248 HSQRVTDMSWSPHH-DARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSGLDPD 72
Query: 206 LCASGGKDGQAMLWDLNE 223
L +GG D +W +++
Sbjct: 71 LVMTGGSDASVHVWRVSQ 18
>31054
Length = 392
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = -2
Query: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD--------VLS 110
L GH+ ++ + ++SDG +SG+ +GT+ LWD TG +R + +
Sbjct: 301 LSGHNAIINTLAVNSDGVL-VSGADNGTMHLWDWRTGYNFQRIHAAVQPGSLDSESGFFA 125
Query: 111 VAFSSDNRQIVSGSRDKTIKLW 132
F ++++ DKTIK++
Sbjct: 124 CTFDQSESRLITAEADKTIKVY 59
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = -2
Query: 161 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
S + + G VK W + N GH +NT+ V+ DG L SG +G LWD
Sbjct: 382 SKAVHFAXGSPDXVKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLV-SGADNGTMHLWD 206
Query: 221 LNEGKHL 227
G +
Sbjct: 205 WRTGYNF 185
>25880
Length = 423
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +2
Query: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
T K+WN V + H V V F +S N IV+ +KLV+V+NL +
Sbjct: 2 TGKVWNA--VSGAEIHSFQHKHIVKSVAFDNSSEN--IVTGSNEKLVRVFNLEQPDAEPE 169
Query: 188 -HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
+ GHTG + +L ASG +DG LW GK
Sbjct: 170 LYGGHTGAIKR-------ALYASGSEDGTLRLWQTTVGK 265
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQI 120
H H V V + + ++GS + +R+++L + GHT + ++S
Sbjct: 53 HKHIVKSVAFDNSSENIVTGSNEKLVRVFNLEQPDAEPELYGGHTGAIKRALYAS----- 217
Query: 121 VSGSRDKTIKLWNT 134
GS D T++LW T
Sbjct: 218 --GSEDGTLRLWQT 253
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2
Query: 80 SGSWDGTLRLWDLTTGTT 97
SGS DGTLRLW T G T
Sbjct: 215 SGSEDGTLRLWQTTVGKT 268
>14500
Length = 1238
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = +3
Query: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
+ISS G FA L +W + GHT VL +A S D +VS + D+T+
Sbjct: 378 LISSHG-FA-----QNQLIIWKYPAMSRVAELTGHTARVLHMAMSPDGETVVSAAADETL 539
Query: 130 KLWNTLGVCK 139
+LW V K
Sbjct: 540 RLWKCFTVDK 569
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Frame = +3
Query: 205 SLCASGG--KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPS---IKIW 259
SL ASGG D W+ N G +L ++D + AL +S L ++ G + + IW
Sbjct: 243 SLLASGGGTADRHIHFWNCNTGTNLSSVDTKSQVCALLWSKEHRELISSHGFAQNQLIIW 422
Query: 260 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 311
V EL + +A S DG+T+ + D +R+W+
Sbjct: 423 KYPAMSRVAELT---------GHTARVLHMAMSPDGETVVSAAADETLRLWK 551
Score = 27.3 bits (59), Expect(2) = 0.034, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Frame = +3
Query: 123 GSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW--DKLVKVWNL 179
G+ D+ I WN G +V +S C +I S G+ ++L+ +W
Sbjct: 264 GTADRHIHFWNCNTGTNLSSVDTKSQV----CALLWSKEHRELISSHGFAQNQLI-IWKY 428
Query: 180 ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
GHT + + +SPDG S D LW
Sbjct: 429 PAMSRVAELTGHTARVLHMAMSPDGETVVSAAADETLRLW 548
Score = 26.6 bits (57), Expect(2) = 0.034, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLW--DLTTGTTTR---RFVGHTKDVLSVAF 113
L GHS V + S DG++ SG+ D L +W +T G +T+ F H V ++A
Sbjct: 47 LSGHSQEVCGLRWSPDGKYLASGANDNLLCVWPAQVTGGNSTQPLHTFSQHQAAVKALAV 226
Query: 114 SSDNRQIV 121
S Q V
Sbjct: 227 VSLAAQSV 250
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 94
L GH+ V + +S DG+ +S + D TLRLW T
Sbjct: 453 LTGHTARVLHMAMSPDGETVVSAAADETLRLWKCFT 560
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 289 LAWSADGQTLFAGYTDNLVRVW--QVTIG 315
L WS DG+ L +G DNL+ VW QVT G
Sbjct: 77 LRWSPDGKYLASGANDNLLCVWPAQVTGG 163
>10162
Length = 1629
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 87/238 (36%), Gaps = 35/238 (14%)
Frame = +3
Query: 30 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 89
++L+ ++ + +W++ + + + L+ H I +G++ G DG ++L
Sbjct: 69 VLLAGTQGGEVWLWQVPSQDYS---KMKMLQSHGQPSLCGKILPNGKYVCVGYSDGVVKL 239
Query: 90 WDLTTGTTTRRF----------------------------VGHTKDVLSVAFSSDNRQIV 121
WDL TGT + T +L V S+DN I+
Sbjct: 240 WDLKTGTAVHTWQHSVMPEEEMPERNSSDEEDGEEVEVEREEDTVAILCVDCSADNALIM 419
Query: 122 SGSRDKTIKLWN-------TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLV 174
SG D T K++N + C + + V V F P S P + V
Sbjct: 420 SGCADATAKVFNVSSGKLXSAFNCAASQDSQDKDNSVESVAFCPVS--PYAATATNSGSV 593
Query: 175 KVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
+VW+L + + H + + S +L + DG +WD G L G
Sbjct: 594 QVWDLPT-SVARHSFQHPEGVCKLQWSSSTALLYTACLDGVMRVWDARSGASKAVLTG 764
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = +3
Query: 18 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQF 77
V +A P P +A+ ++ +W L + H V + SS
Sbjct: 528 VESVAFCPVSP-YAATATNSGSVQVWDLPTSVARHSFQ------HPEGVCKLQWSSSTAL 686
Query: 78 ALSGSWDGTLRLWDLTTGTTTRRFVGHTKD--VLSVAFSSDNRQIVSGSRDKTIKL 131
+ DG +R+WD +G + GH ++ +L + D +VSGS D T ++
Sbjct: 687 LYTACLDGVMRVWDARSGASKAVLTGHARNSCILDFDVTRDGTCLVSGSEDGTARV 854
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 10/129 (7%)
Frame = +3
Query: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL---------DGGDIINALCFSP-NRYW 247
V S D +L SG D A +++++ GK D + + ++ F P + Y
Sbjct: 387 VDCSADNALIMSGCADATAKVFNVSSGKLXSAFNCAASQDSQDKDNSVESVAFCPVSPYA 566
Query: 248 LCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 307
A S+++WDL + + P L WS+ L+ D ++
Sbjct: 567 ATATNSGSVQVWDLPTSVARHSFQH----------PEGVCKLQWSSSTALLYTACLDGVM 716
Query: 308 RVWQVTIGT 316
RVW G
Sbjct: 717 RVWDARSGA 743
>04524
Length = 1340
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -1
Query: 47 RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHT 105
+DE + L GH V DV ++ ++ D +R+ + +GHT
Sbjct: 1076 KDEGEVKTHGQLLLGHLSMVLDVCLTGREGHVVTCDRDEKIRVSQFPNAYNIHTYCLGHT 897
Query: 106 KDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG 136
+ V + + + R ++SGS D T++ WN G
Sbjct: 896 QFVNCLVYVEEFRVLISGSGDCTVRAWNMEG 804
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 12/130 (9%)
Frame = -1
Query: 110 SVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDES-----------HSEWVSCVRFSP 158
SV F+SD Q++ DKT ++ + V+DE H V V +
Sbjct: 1169 SVTFTSDEGQVIVA--DKTGDVYTFPTTTQVEVKDEGEVKTHGQLLLGHLSMVLDVCLTG 996
Query: 159 NSSNPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAM 217
+ +V+C D+ ++V N + T +GHT ++N + + + SG D
Sbjct: 995 REGH--VVTCDRDEKIRVSQFPNAYNIHTYCLGHTQFVNCLVYVEEFRVLISGSGDCTVR 822
Query: 218 LWDLNEGKHL 227
W++ EGK L
Sbjct: 821 AWNM-EGKQL 795
>31864
Length = 545
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 8/129 (6%)
Frame = +2
Query: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL 248
+ HTG +N + +S DG++ + KD A L+D L T +N+ SP +
Sbjct: 41 VDHTGGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPILDHV 220
Query: 249 CAATGP--------SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA 300
G S K + + ++E P SLA+ DG++ +
Sbjct: 221 VLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGP--INSLAFHPDGKSYAS 394
Query: 301 GYTDNLVRV 309
G D VRV
Sbjct: 395 GGEDGFVRV 421
>29912
Length = 510
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%)
Frame = +3
Query: 61 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI 120
G ++ V +G + G+ G +++WD+T R GH V S++++S +
Sbjct: 3 GPEEYIGAVSWIKEGNYLALGTSTGEVQVWDVTQQKKLRTMAGHAARVGSLSWNS--FIV 176
Query: 121 VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
SGSR I + + HS+ V +R+SP+ + S D L+ VW
Sbjct: 177 SSGSRSGNIHHHDVRVADHHVGTLSGHSQEVCGLRWSPDGK--YLASGANDNLLCVW 341
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Frame = +3
Query: 194 YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATG 253
Y+ V+ +G+ A G G+ +WD+ + K L T+ G S N + + + +
Sbjct: 15 YIGAVSWIKEGNYLALGTSTGEVQVWDVTQQKKLRTM-AGHAARVGSLSWNSFIVSSGS- 188
Query: 254 PSIKIWDLEGKIIVDELK--QEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW- 310
G I +++ + T S C L WS DG+ L +G DNL+ VW
Sbjct: 189 -------RSGNIHHHDVRVADHHVGTLSGHSQEVC-GLRWSPDGKYLASGANDNLLCVWP 344
Query: 311 -QVTIG 315
QVT G
Sbjct: 345 AQVTGG 362
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +3
Query: 1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
+T+Q LR T+ GH ++ + ++ S SR I + + + G L
Sbjct: 96 VTQQKKLR-TMAGH---AARVGSLSWNSFIVSSGSRSGNIHHHDVRVADHHVGT----LS 251
Query: 61 GHSHFVSDVVISSDGQFALSGSWDGTLRLW--DLTTGTTTR---RFVGHTKDVLSVAF 113
GHS V + S DG++ SG+ D L +W +T G +T+ F H V ++A+
Sbjct: 252 GHSQEVCGLRWSPDGKYLASGANDNLLCVWPAQVTGGNSTQPLHTFSQHQAAVKALAW 425
>11915
Length = 737
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 50 TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVL 109
TN QR R + S +V+++ G G ++LW+ TG + H V
Sbjct: 388 TNNCYKQRWKRQQQNDSSTLVLAT-------GHVSGRIKLWNCETGKLLIEMMDHKATVH 546
Query: 110 SVAFSSDNRQ-IVSGSRDKTIKLW 132
+ F++DN ++S S D T+KLW
Sbjct: 547 DLHFAADNSLCLMSASHDGTVKLW 618
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 155 RFSPNSSNPIIVSCGW-DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC-ASGGK 212
R N S+ ++++ G +K+WN KL + H ++ + + D SLC S
Sbjct: 418 RQQQNDSSTLVLATGHVSGRIKLWNCETGKLLIEMMDHKATVHDLHFAADNSLCLMSASH 597
Query: 213 DGQAMLWDLNE 223
DG LW+ ++
Sbjct: 598 DGTVKLWEFDD 630
>27270
Length = 1078
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +2
Query: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQ-RALRGHSHFVSDVV 70
KGH+ VT + + S+S D +I W + T + I + +A G H V V
Sbjct: 263 KGHSKAVTDMCWRAD-GRTLYSSSLDGHVIGWNV---NTLHMIEKWKATSGRHHGVHCVC 430
Query: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
+ S + + D T+++WDLTT + F GH+ +V+ +
Sbjct: 431 LCSSSRLLTA---DHTIKMWDLTTKNVLQEFSGHSTEVIKL 544
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
++D GS DG++ L+ + T T T GH+K V + + +D R + S S D +
Sbjct: 170 AADSAVVAVGSADGSVGLYSVETHTYTHMLNKGHSKAVTDMCWRADGRTLYSSSLDGHVI 349
Query: 131 LW--NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
W NTL + + V CV SS+ ++ + D +K+W+L +
Sbjct: 350 GWNVNTLHMIEKWKATSGRHHGVHCVCLC--SSSRLLTA---DHTIKMWDLTTKNVLQEF 514
Query: 189 IGHT 192
GH+
Sbjct: 515 SGHS 526
>13890
Length = 630
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 13/170 (7%)
Frame = +1
Query: 87 LRLWDLTTGTTTRRFVGHTKD---VLSVAFSSDNRQIVS-------GSRDKTIKLWNTLG 136
+++WD+ R + H + V V FS D +++ S S D++I W+
Sbjct: 52 IQVWDVRHPEVPVRVLTHKEQLGQVQDVMFSHDGQEVFSCGDVVSRESSDRSIMAWDFRT 231
Query: 137 VCKYTVQDESHSEWVSCVRFSPNSSNPII-VSCGWDKLVKVWNLANCKLKTNHIGH--TG 193
+ Q V+ + P S + G+ + GH G
Sbjct: 232 GVILSNQIFQERYTVTRLMLHPYQSQFLAQTQAGYIAVFSTQRPYKMNKNKRFEGHKTAG 411
Query: 194 YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Y ++S DGS+ SG DG+ + N K + TL G ++ + P
Sbjct: 412 YNIGASLSQDGSIVYSGSSDGKLHCYSFNTTKKIRTLHCGQVVMDVTSHP 561
>34005
Length = 456
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 7/121 (5%)
Frame = +1
Query: 34 ASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT 93
A+ T W+ TR PQ V + S D F SGS D ++ +WD T
Sbjct: 49 ATSTTTTYAWRATRWGFCPLTPQE--------VCGLSWSPDATFLASGSNDNSVNIWDST 204
Query: 94 TGTTT---RRFVGHTKDVLSVAFSSDNRQIVS---GSRDKTIKLWNT-LGVCKYTVQDES 146
G H V +VA+ ++++ G+ D+ I+ WNT G C V +S
Sbjct: 205 LGMDVPPLHTLTSHQAAVKAVAWCPWQTRMLATGGGTNDRHIRFWNTNTGACVKAVDTQS 384
Query: 147 H 147
Sbjct: 385 Q 387
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 283 PPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
P + L+WS D L +G DN V +W T+G
Sbjct: 112 PQEVCGLSWSPDATFLASGSNDNSVNIWDSTLG 210
>31474
Length = 403
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = -3
Query: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN----CKLKTNHIGHTGYLNTVTVS 201
+H E CV ++P + ++ SCG DK++K+W CK T HT + ++ S
Sbjct: 311 AHDEHAWCVAWNPTGT--LLASCGSDKIIKIWGKEGDNWVCK-STLTDAHTRTVRSLGWS 141
Query: 202 PDGSLCASGGKDGQAMLWDLNEGKH--LYTLDGGD 234
P G+ +S D +W G+ + TL+G +
Sbjct: 140 PCGNYLSSASFDATTAVWSRKGGEFECIATLEGHE 36
>05642
Length = 445
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = -1
Query: 191 HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI--INALCFSPNRYWL 248
H+ Y ++ + +L SG +DG+ WDL E K + TLD +++L F L
Sbjct: 412 HSQYKIDSCLNNEDTLVVSGSEDGKVYFWDLVEAKLVDTLDHKTTRPVHSLSFHHAELCL 233
Query: 249 CAATGPSIKIW 259
A + +W
Sbjct: 232 MTACADKVFLW 200
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGH--TKDVLSVAFSSDNRQ 119
HS + D ++++ +SGS DG + WDL + H T+ V S++F
Sbjct: 412 HSQYKIDSCLNNEDTLVVSGSEDGKVYFWDLVEAKLVDT-LDHKTTRPVHSLSFHHAELC 236
Query: 120 IVSGSRDKTIKLWNT 134
+++ DK LW +
Sbjct: 235 LMTACADKVF-LWRS 194
>15972
Length = 1069
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 53 GIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
G P+R GH V + + G+ L+ S D TLRLW+ G F+ + K+
Sbjct: 207 G*PERTFSGHKGPVRHLAVHPSGKLTLTVSQDRTLRLWNNMNGRIA--FISNMKE 365
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/75 (20%), Positives = 33/75 (44%)
Frame = +3
Query: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249
GH G + + V P G L + +D LW+ G+ + + + ++ ++P +
Sbjct: 231 GHKGPVRHLAVHPSGKLTLTVSQDRTLRLWNNMNGRIAFISNMKEAAESVRWAPGGLYYV 410
Query: 250 AATGPSIKIWDLEGK 264
A + ++ +E K
Sbjct: 411 VAFRSHLDVYSVESK 455
Score = 28.1 bits (61), Expect(2) = 3.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 99 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL 135
R F GH V +A + ++ S+D+T++LWN +
Sbjct: 219 RTFSGHKGPVRHLAVHPSGKLTLTVSQDRTLRLWNNM 329
Score = 18.5 bits (36), Expect(2) = 3.8, Method: Compositional matrix adjust.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 79 LSGSWDGTLRLWDLTT 94
S S DGTL LW ++T
Sbjct: 158 FSTSEDGTLCLWRVST 205
>35607
Length = 475
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 202 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL 248
PDG+ +GG D WDL EG+ L D I +L + P WL
Sbjct: 8 PDGTKLWTGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYCPTGDWL 148
>15337
Length = 860
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = -1
Query: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASG 210
+S FSP S +V G D ++V+N + +L + G L V SPDG +G
Sbjct: 320 ISEFAFSPCSRYLAVV--GQDGHLRVFNYNSMELIGTMKSYFGGLLCVCWSPDGKYIVTG 147
Query: 211 GKDGQAMLWDLNEGK 225
G+D +W +E +
Sbjct: 146 GEDDLVTVWSFHEKR 102
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = -1
Query: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
+T R+V T + AFS +R + +D ++++N + + +S+ +
Sbjct: 365 STRNPLYRWVVGTGAISEFAFSPCSRYLAVVGQDGHLRVFNYNSM-ELIGTMKSYFGGLL 189
Query: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVT 199
CV +SP+ IV+ G D LV VW+ ++ GH ++N V
Sbjct: 188 CVCWSPDGK--YIVTGGEDDLVTVWSFHEKRVVCRGHGHKSWVNVVA 54
>17807
Length = 484
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Frame = -2
Query: 74 DGQFALSGSWDGTLRLWDLTTGTTT--RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
D ++ LSGS DG +RLW++ T G + + + +F + R V G+ D
Sbjct: 426 DDRYFLSGSLDGKIRLWNIPDKKVTMWNELSGSSNLITTASFCHNGRLAVVGTYDGRCIF 247
Query: 132 WNTLGVCKYTVQD-------ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
+ T + YT+ + + ++ + P ++ S D V++++L + L
Sbjct: 246 YTTDQLKYYTMLNVRSTRGRNARGRKITGIEAMPGEEKILVTS--NDSRVRLYSLKDLTL 73
Query: 185 KTNHIGHTGYLNTV--TVSPDG 204
+ G T + + + SP G
Sbjct: 72 TCKYKGCTNNSSQIKASFSPTG 7
>17298
Length = 476
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = -1
Query: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
DG + ++ +G R++ H V V F+ ++ I+SGS D T++ W+T
Sbjct: 275 DGVVVGNNVASGQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDT 123
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -1
Query: 53 GIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--RRFVGHTKDVLS 110
G R R H+ V+ V + + LSGS D T+R WD + + T + T V S
Sbjct: 242 GQALRKYRDHAGTVNCVKFNEESTVILSGSLDNTVRAWDTRSRSHTPIQVLDEATDSVTS 63
Query: 111 VAFSSDNRQIVSGSRDKTIKLW 132
+ S + +I++GS D ++ +
Sbjct: 62 IQVS--DYEILTGSADGRVRRY 3
>00825
Length = 1821
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 90/239 (37%), Gaps = 3/239 (1%)
Frame = -2
Query: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
SG+ DG L W+L R H V +A S + S DKTIK W +L
Sbjct: 1820 SGACDGELICWNLPKQQMACRVQAHDGIVHGMAAHSSGQYFFSCGSDKTIKQW-SLDPEG 1644
Query: 140 YTVQDESHSEWVSCVRFSPNS--SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
+ ++ C+ S + + I V+ G V VW+ + + ++
Sbjct: 1643 TIAPEPVNTLLAKCIYTSLDHHWKDDIFVTSG--SRVDVWDEKRSEPMRSFSWGVESVHH 1470
Query: 198 VTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSI 256
V +P + L + D +L+D+ L + NAL ++P + +
Sbjct: 1469 VKFNPVETYLLGAAAHDRSILLYDMRGSAPLRKVVMKMRTNALSWNPMEAFTITSANEDG 1290
Query: 257 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
++ + + + L T++ + C + G+ + D ++R++ V G
Sbjct: 1289 NLYTFDMRKLSMPLNMHRDHTAAVMDVDYCPT------GREFVSAGYDKVIRIFPVDKG 1131
>20662
Length = 1220
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Frame = +2
Query: 119 QIVSGSRD-------KTIKLWNTLGVCKYTVQDE-----------SHSEWVSCVRFSPNS 160
Q+ +G RD K + +T GV + +QDE H + + V S NS
Sbjct: 245 QLEAGLRDAAWVDSHKVLVGLDTGGVALWELQDEDKMFSMLSSACEHDDMTASV--SINS 418
Query: 161 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLW 219
+S +D +KVWN L T + H+ + V P + +L S +DG+ +LW
Sbjct: 419 DXSHYLSASYDHGIKVWNTDLTSLYT-YRAHSDIVWDVQCHPTEPALFLSCSQDGKIVLW 595
Query: 220 DLNEGK 225
D+ E K
Sbjct: 596 DVRESK 613
>16199
Length = 694
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
DG +G+ D +++WDL F GH V S++FS
Sbjct: 104 DGLIFATGTEDSVIKIWDLKERANVANFQGHQGPVTSISFS 226
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 151 VSCVRFSPNSSNPIIVSCG-WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS 201
++C +F P+ +I + G D ++K+W+L N GH G + +++ S
Sbjct: 80 LTCAQFHPDG---LIFATGTEDSVIKIWDLKERANVANFQGHQGPVTSISFS 226
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
L PDG + A+G +D +WDL E ++ G
Sbjct: 80 LTCAQFHPDGLIFATGTEDSVIKIWDLKERANVANFQG 193
>12140
Length = 727
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Frame = +2
Query: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNP--IIVSCGWDKLV 174
++ VSG D +K+W Q E HS+WV V ++P+ P +I SC D V
Sbjct: 263 KRFVSGGCDNLVKIWREDETGWVEDQKLEGHSDWVRDVAWAPSIGLPRNVIASCSQDCRV 442
Query: 175 KVW-NLANCKLKTNHI--GHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
+W N + T+ I + + V+ S G++ A G D + LW
Sbjct: 443 IIWTNDGSSNQWTSRILNKFSDVVWHVSWSVTGNILAVSGGDNKVTLW 586
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 11 LKGHNGWVTQIATTPQF---PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS 67
L+GH+ WV +A P ++I S S+D +I+W T D ++ R L S V
Sbjct: 344 LEGHSDWVRDVAWAPSIGLPRNVIASCSQDCRVIIW--TNDGSSNQWTSRILNKFSDVVW 517
Query: 68 DVVISSDGQ-FALSGSWDGTLRLW 90
V S G A+SG D + LW
Sbjct: 518 HVSWSVTGNILAVSGG-DNKVTLW 586
>27475
Length = 369
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 43
TE T++ H GWVT + +P + LS S D + +W
Sbjct: 29 TEGETVKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLW 154
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +2
Query: 93 TTGTTTR-RFVGHTKDVLSVAFSSDNRQI-VSGSRDKTIKLWNTLGVCKYTVQDES-HSE 149
T G T + F HT V V +S + +SGS D +KLW+T K T+ D + H +
Sbjct: 29 TEGETVKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSP-KATLYDMNWHED 205
Query: 150 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
+ V +S +++S G D + V++ ++ KL T
Sbjct: 206 RILAVDWSIPE---LLLSGGVDNKLHVFSYSSAKLGT 307
>12841
Length = 1364
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Frame = +1
Query: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRD 126
D+V GQF + G + W L R T V S+ FS N I+ +G D
Sbjct: 442 DLVAVGYGQFDFTNQKSGLICCWSLKNPEYPERVYTSTHGVTSLDFSVANANILAAGYYD 621
Query: 127 KTIKLWNTLGVCKYTVQD--ESHS---------EWVSCVRFSPNSSNPIIVSCGWDKLVK 175
+ ++N + D E+H +W+ R S +++S D V
Sbjct: 622 GGVAIYNVRSTSDEPILDNQETHGKHLGPVWQIQWIEKERGSGEERAEVLISISTDGRVT 801
Query: 176 VWNL 179
W++
Sbjct: 802 QWSI 813
>15745
Length = 1183
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 121 VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA 180
++ + + TI+ W+ + + +H + V + F+PN + SCG D VK W+
Sbjct: 629 IATANEATIRGWDLRSKQQTYQMEGAHGQLVRDLDFNPNRQY-YLASCGDDCRVKFWDTR 805
Query: 181 NC 182
NC
Sbjct: 806 NC 811
>27681
Length = 465
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +2
Query: 80 SGSWDGTLRLWDLTTGTTTRR--------------FVGHTKDVLSVAFSSDNRQIVSGSR 125
SGS D T R+W++T+ T V KDV S+ ++S+ + +GS
Sbjct: 44 SGSGDSTARIWNMTSETPNNANQLVLRHCIQKGGTEVPSNKDVTSLDWNSEGTLLATGSY 223
Query: 126 DKTIKLWNTLG 136
D +LW T G
Sbjct: 224 DGYARLWRTDG 256
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Frame = +2
Query: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALR-----GHSHFVSDVVISS-----DGQFA 78
D++ S S D T +W +T ET Q LR G + S+ ++S +G
Sbjct: 32 DLLASGSGDSTARIWNMT-SETPNNANQLVLRHCIQKGGTEVPSNKDVTSLDWNSEGTLL 208
Query: 79 LSGSWDGTLRLW 90
+GS+DG RLW
Sbjct: 209 ATGSYDGYARLW 244
>03734
Length = 1963
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Frame = -2
Query: 149 EWVSCVRFSPNSSNPIIVSCGWDKL----VKVWNLANC--KLKTNHIGHTGYLNT----- 197
E +SC SP+ + ++V +KL V V NL + K++ + LN
Sbjct: 1317 ERISCSTISPDGT--VVVFSDQEKLRMYKVHVTNLTSLTPKVEVKSVSLPPKLNKYPAQR 1144
Query: 198 VTVSPDGSLCASGGKDGQAMLWDL--NEGKHLYTL-------DGGDIINALCFSPN-RYW 247
+ ++PD S +WD+ ++G L+T+ +G LC S N +
Sbjct: 1143 LAITPDNRYLVSATSVSSLQIWDISDDKGTLLHTVRPEETEEEGRHSFTNLCVSDNSKMA 964
Query: 248 LCAATGPSIKIWDL-EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNL 306
+ +G + ++ + EG+++ K +S Q T+++++ +TL Y+D+
Sbjct: 963 ATSNSGGQVHLYSIAEGEVLC---KLPALSQ-------QATAISFTXAARTLLVTYSDHK 814
Query: 307 VRVWQV 312
V + V
Sbjct: 813 VMEFDV 796
>34511
Length = 1037
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
L GH + VS + ++ +G +GSWD LR+W+
Sbjct: 60 LAGHDNRVSCLGVTENGMSVATGSWDSFLRVWN 158
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGH 191
H VSC+ + N + + + WD ++VWN +C ++ N G
Sbjct: 69 HDNRVSCLGVTENGMS--VATGSWDSFLRVWN*VSCTMRINGWGR 197
>31118
Length = 390
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
HS + C+RFSP++ +++C +D +K+ +L
Sbjct: 383 HSAEIRCIRFSPSAY--YMLTCSYDSTIKLTDL 291
>27806
Length = 419
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -1
Query: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
+PII + D +++++ + GH G +N V P L + D A +W
Sbjct: 389 HPIIGTASADHTARIYSIETGACVLTYGGHQGSVNAVRFHPGQDLVLTASGDHTAHVW 216
>01805
Length = 2124
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 2/176 (1%)
Frame = -1
Query: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
++ GH V ++ ++ SAS D T+ +W L+ + Q HS V
Sbjct: 591 SVTGHTQAVLDLSWNRNARHVLASASADTTVALWDLSEGKMAMNFTQ-----HSREVQCC 427
Query: 70 V-ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
+ Q L+GS+D T+++ D + T + +V ++ N + DK
Sbjct: 426 NWHPQEEQTLLTGSFDNTVKVVDCRSAETCHKSWTVEGEVEKAVWNHHNPLQLLACTDKG 247
Query: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP-IIVSCGWDKLVKVWNLANCK 183
+ + K +HS V+ V S S P ++++ DK +KVW++ + K
Sbjct: 246 MVYCFDIRHEKPVFSVGAHSSCVTGVCLS--SQIPGLMITTSEDKTMKVWDIQDDK 85
>18320
Length = 450
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 13/84 (15%)
Frame = -2
Query: 111 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ-------------DESHSEWVSCVRFS 157
V + + + +GSRD+ + L L + KY D++HS W+ C+
Sbjct: 266 VHLMQNGQLLAAGSRDRYLTL---LDLTKYDPARPKSKKDMQLHCIDKAHSGWIWCMA-- 102
Query: 158 PNSSNPIIVSCGWDKLVKVWNLAN 181
S N + + WD +KVW+L
Sbjct: 101 --SLNQHLYTGSWDTKIKVWDLGQ 36
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = -2
Query: 30 MILSASRDKTIIMWKLTRDETNYGIPQRALRGH----SHFVSDVVISSDGQFALSGSWDG 85
++ + SRD+ + + LT+ + ++ ++ H +H ++S Q +GSWD
Sbjct: 242 LLAAGSRDRYLTLLDLTKYDPARPKSKKDMQLHCIDKAHSGWIWCMASLNQHLYTGSWDT 63
Query: 86 TLRLWDL 92
+++WDL
Sbjct: 62 KIKVWDL 42
>07781
Length = 1269
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = -2
Query: 76 QFALSGSWDGTLRLWDLTTGT----TTRRFVGHTKDVLSVAFSSDNRQIVS-GSRDKTIK 130
+ SGS D L++WDL GT T RF T V S+ +++ GS D+ ++
Sbjct: 752 ELIYSGSDDCKLKVWDLRVGTTPVLTNSRF---TMGVTSIQSCPQREHLLAVGSYDENLR 582
Query: 131 LWNT 134
L++T
Sbjct: 581 LFDT 570
>35695
Length = 1651
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/152 (18%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Frame = -1
Query: 87 LRLWDLTTGTTTRRFVGHTKDVLSV-AFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
L +WD+ G + H ++++ + + ++S S DKTI +WN + + +
Sbjct: 1639 LYVWDVKQGNMVKTLDAHFGRIIALTSVTVGCNMVISSSIDKTINVWNFDKILEEVHPLD 1460
Query: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG--HTGYLNTVTVSPD 203
+ V + +SS + V+ ++ VW+L +L +G + ++ ++ +
Sbjct: 1459 RMERPIETVHMAASSS--LCVATTRNQ-TSVWDLETGRLVKVLVGSSRSNXVSQAFITRE 1289
Query: 204 GSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI 235
G+ + + ++W +N+ + + GDI
Sbjct: 1288 GTHVLT-AESPSLLVWQMNQTSPVTQVSIGDI 1196
>30108
Length = 1032
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 12/158 (7%)
Frame = +1
Query: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT----------NHIGHTGYLNTVTV 200
V+ + + P S++ + V+C V +W++ L H GH + +
Sbjct: 235 VAHLAWQPLSASVLAVAC--QSAVLIWHIEPTSLAARPSSSSVQVLQHSGHCPITHLAWL 408
Query: 201 SPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGDIINALCFSPNRYWLCAATGPSI-KI 258
L ++ D M W + E GG ++ L SP+ + AAT ++ ++
Sbjct: 409 PSANILLSASPVDTAVMAWSVGGEACTALRYLGGGGVSLLACSPDGSKVMAATPATLFRV 588
Query: 259 WDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ 296
WD EV S S +CTS WS DGQ
Sbjct: 589 WD------TTSWHCEVWSQLSG----RCTSACWSHDGQ 672
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981939|ref|NP_033477.2| tubulin, beta 4 [Mus
musculus]
(444 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
16482 469 e-132
13181 459 e-129
04882 436 e-122
00276 275 3e-74
28905 255 8e-69
31457 244 4e-65
25015 243 9e-65
39157 229 3e-64
12457 208 3e-54
05902 155 3e-38
06360 134 8e-32
03702 120 2e-27
17215 83 2e-16
29025 36 0.038
>16482
Length = 837
Score = 469 bits (1206), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/246 (90%), Positives = 226/246 (91%)
Frame = +1
Query: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YV
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 279
Query: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 280 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 459
Query: 121 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVVPSPKVSDTVV 180
RKEAESCDCLQGFQ KIREE+PDRIMNTFSVVPSPKVSDTVV
Sbjct: 460 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 639
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 640 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 819
Query: 241 RFPGQL 246
RFPGQL
Sbjct: 820 RFPGQL 837
>13181
Length = 1092
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/220 (97%), Positives = 220/220 (100%)
Frame = -3
Query: 208 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 268 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 327
PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 328 EQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTA 387
EQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATF+GNSTAIQELFKRISEQFTA
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFVGNSTAIQELFKRISEQFTA 551
Query: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 550 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 431
>04882
Length = 1136
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/209 (97%), Positives = 209/209 (100%)
Frame = +2
Query: 219 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 278
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS
Sbjct: 320 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 499
Query: 279 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNS 338
QQYRALTVPELTQQMFD+KNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQML+VQ+KNS
Sbjct: 500 QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS 679
Query: 339 SYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398
SYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY
Sbjct: 680 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 859
Query: 399 TGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
TGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 860 TGEGMDEMEFTEAESNMNDLVSEYQQYQD 946
>00276
Length = 1330
Score = 275 bits (702), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 205/355 (57%), Gaps = 8/355 (2%)
Frame = -3
Query: 78 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQXXX 137
+G + Q+ P+ V G+ A NN+A+GHYT G ELVD VLD +RK A+ C LQGF
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 138 XXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTD 197
++ ++ + F + P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 198 ETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNM 257
+ +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 258 VPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVF 317
VP+PR+HF + +AP+ S + L V E+T F+ N + CDPRHG+Y+ ++
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 318 RGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIG 369
RG + K+V+ + ++++K + FV+W P K + PP ++ A +
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 267
>28905
Length = 425
Score = 255 bits (651), Expect(2) = 8e-69, Method: Compositional matrix adjust.
Identities = 121/129 (93%), Positives = 126/129 (97%), Gaps = 1/129 (0%)
Frame = -1
Query: 253 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 312
+AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 389 VAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 210
Query: 313 VAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNST 372
VAA+FRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TFIGNST
Sbjct: 209 VAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSGTFIGNST 30
Query: 373 AIQ-ELFKR 380
AIQ LFKR
Sbjct: 29 AIQGRLFKR 3
Score = 23.9 bits (50), Expect(2) = 8e-69, Method: Composition-based stats.
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 242 FPGQLNADL 250
FPGQLNADL
Sbjct: 424 FPGQLNADL 398
>31457
Length = 1530
Score = 244 bits (624), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/119 (94%), Positives = 119/119 (100%)
Frame = +3
Query: 309 RYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFI 368
+YLTVAA+FRGRMSMKEVDEQML+VQ+KNSSYFVEWIPNNVKTAVCDIPPRGLKM++TFI
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI 413
Query: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 414 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 590
>25015
Length = 458
Score = 243 bits (621), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 113/115 (98%), Positives = 114/115 (99%)
Frame = -3
Query: 20 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSG 79
FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YVPRAVLVDLEPGTMDSVRSG
Sbjct: 363 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 184
Query: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQ 134
PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAESCDCLQGFQ
Sbjct: 183 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 19
>39157
Length = 488
Score = 229 bits (584), Expect(2) = 3e-64, Method: Compositional matrix adjust.
Identities = 113/127 (88%), Positives = 117/127 (92%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YV
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 264
Query: 61 PRAVLVDLEPGTMDSVRSG-PFG-QIFRPDNFVFGQSGAGNNWAKGHYTE-GAELVDAVL 117
PRAVLVDLEPGTMDSVRSG PFG +IFRPDNFVFGQSGAGNNW + T+ GAELVD+VL
Sbjct: 263 PRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDSVL 84
Query: 118 DVVRKEA 124
DVVRK
Sbjct: 83 DVVRKRG 63
Score = 33.9 bits (76), Expect(2) = 3e-64, Method: Compositional matrix adjust.
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 122 KEAESCDCLQGFQ 134
KEAESCDCLQGFQ
Sbjct: 70 KEAESCDCLQGFQ 32
>12457
Length = 781
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 141/239 (58%)
Frame = -1
Query: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEA 124
LVDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK A
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 125 ESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVVPSPKVSDTVVEPYN 184
+ C LQGF ++ ++ + F++ P+P+VS VVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 185 ATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPG 244
+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 245 QLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAAC 303
LN DL + N+VP+PR+HF + +AP+ S + LTV E+T F+ N M C
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKC 2
>05902
Length = 1127
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 158/282 (56%), Gaps = 12/282 (4%)
Frame = +2
Query: 154 KIREEFPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 212
K+ + FP +++ T+SV P+ ++SD VV+PYN+ L++ +L +N D +DN AL I
Sbjct: 74 KLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAA 253
Query: 213 RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 272
L + TPT+ +N LVS MS TT LR+PG +N DL L +++P PRLHF M G+ P
Sbjct: 254 DRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTP 433
Query: 273 LTSRGS-QQYRALTVPELTQQMFDAKNMMAACDPRHGR----YLTVAAVFRGRMSMKEVD 327
LT+ R TV ++ +++ KNMM + P H + Y+++ + +G + +V
Sbjct: 434 LTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQVH 610
Query: 328 EQMLSVQSKNSSYFVEWIPNNVKTAVCDIPP---RGLKMAATFIGNSTAIQELFKRISEQ 384
+ + ++ + + F+ W P +++ A+ P +++ + N T+I LF+RI Q
Sbjct: 611 KSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSISHLFERILRQ 790
Query: 385 FTAMFRRKAFLHWYTGEGM--DEM-EFTEAESNMNDLVSEYQ 423
+ + +R+AF+ + E + D + EF + + LV EYQ
Sbjct: 791 YDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>06360
Length = 1896
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 98/179 (54%), Gaps = 2/179 (1%)
Frame = -1
Query: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGN 58
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 59 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLD 118
+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 119 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEFPDRIMNTFSVVPSPKVSD 177
+RK A+ C LQGF ++ ++ + F++ P+P+VSD
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSD 1174
>03702
Length = 1932
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Frame = +1
Query: 167 FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLN 226
F++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P Y +LN
Sbjct: 1501 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPXYTNLN 1680
Query: 227 HLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG-FAPLTSRGSQQYRALT 285
L+ +S +T LRF G LN DL + N+VP P H PG P+ S + LT
Sbjct: 1681 RLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCPVISAEKAYHEQLT 1854
Query: 286 VPELTQQMFDAKNMMAACDP 305
V E+T F+ N + CDP
Sbjct: 1855 VAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 8/117 (6%)
Frame = +3
Query: 316 VFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 367
++RG + K+V+ + ++++K + FV+W P K + PP ++ A
Sbjct: 6 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 185
Query: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 186 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 356
>29025
Length = 395
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 412 ESNMNDLVSEYQQYQD 427
ESNMNDLVSEYQQYQD
Sbjct: 354 ESNMNDLVSEYQQYQD 307
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|7106439|ref|NP_035785.1| tubulin, beta 5 [Mus
musculus]
(444 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
16482 468 e-132
13181 460 e-130
04882 436 e-123
00276 276 9e-75
28905 256 4e-69
31457 248 4e-66
25015 242 2e-64
39157 227 1e-63
12457 209 2e-54
05902 152 3e-37
06360 137 1e-32
03702 120 8e-28
17215 84 1e-16
29025 36 0.037
>16482
Length = 837
Score = 468 bits (1204), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/246 (90%), Positives = 227/246 (92%)
Frame = +1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 279
Query: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 280 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 459
Query: 121 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 180
RKEAESCDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 460 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 639
Query: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 640 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 819
Query: 241 RFPGQL 246
RFPGQL
Sbjct: 820 RFPGQL 837
>13181
Length = 1092
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 215/220 (97%), Positives = 219/220 (99%)
Frame = -3
Query: 208 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 268 PGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 327
PGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTA 387
EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TF+GNSTAIQELFKRISEQFTA
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFVGNSTAIQELFKRISEQFTA 551
Query: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 550 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 431
>04882
Length = 1136
Score = 436 bits (1122), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/209 (97%), Positives = 208/209 (99%)
Frame = +2
Query: 219 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 278
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS
Sbjct: 320 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 499
Query: 279 QQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNS 338
QQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNS
Sbjct: 500 QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS 679
Query: 339 SYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398
SYFVEWIPNNVKTAVCDIPPRGLKM+ TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY
Sbjct: 680 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 859
Query: 399 TGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
TGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 860 TGEGMDEMEFTEAESNMNDLVSEYQQYQD 946
>00276
Length = 1330
Score = 276 bits (707), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 204/355 (57%), Gaps = 8/355 (2%)
Frame = -3
Query: 78 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXX 137
+G + Q+ P+ V G+ A NN+A+GHYT G ELVD VLD +RK A+ C LQGF
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 138 XXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTD 197
++ +Y + F + P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 198 ETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNM 257
+ +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 258 VPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVF 317
VP+PR+HF + +AP+ S + L V E+T F+ N + CDPRHG+Y+ ++
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAVTFIG 369
RG + K+V+ + ++ K + FV+W P K + PP ++ AV +
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 267
>28905
Length = 425
Score = 256 bits (654), Expect(2) = 4e-69, Method: Compositional matrix adjust.
Identities = 122/129 (94%), Positives = 126/129 (97%), Gaps = 1/129 (0%)
Frame = -1
Query: 253 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLT 312
+AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLT
Sbjct: 389 VAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 210
Query: 313 VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNST 372
VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TFIGNST
Sbjct: 209 VAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSGTFIGNST 30
Query: 373 AIQ-ELFKR 380
AIQ LFKR
Sbjct: 29 AIQGRLFKR 3
Score = 23.9 bits (50), Expect(2) = 4e-69, Method: Composition-based stats.
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 242 FPGQLNADL 250
FPGQLNADL
Sbjct: 424 FPGQLNADL 398
>31457
Length = 1530
Score = 248 bits (632), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/119 (96%), Positives = 118/119 (99%)
Frame = +3
Query: 309 RYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFI 368
+YLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TFI
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI 413
Query: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD
Sbjct: 414 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 590
>25015
Length = 458
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/115 (97%), Positives = 115/115 (100%)
Frame = -3
Query: 20 FWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSG 79
FWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYVPRA+LVDLEPGTMDSVRSG
Sbjct: 363 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 184
Query: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 134
PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 183 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 19
>39157
Length = 488
Score = 227 bits (579), Expect(2) = 1e-63, Method: Compositional matrix adjust.
Identities = 111/127 (87%), Positives = 118/127 (92%), Gaps = 3/127 (2%)
Frame = -1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 264
Query: 61 PRAILVDLEPGTMDSVRSG-PFG-QIFRPDNFVFGQSGAGNNWAKGHYTE-GAELVDSVL 117
PRA+LVDLEPGTMDSVRSG PFG +IFRPDNFVFGQSGAGNNW + T+ GAELVDSVL
Sbjct: 263 PRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDSVL 84
Query: 118 DVVRKEA 124
DVVRK
Sbjct: 83 DVVRKRG 63
Score = 33.9 bits (76), Expect(2) = 1e-63, Method: Compositional matrix adjust.
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 122 KEAESCDCLQGFQ 134
KEAESCDCLQGFQ
Sbjct: 70 KEAESCDCLQGFQ 32
>12457
Length = 781
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 141/239 (58%)
Frame = -1
Query: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
LVDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK A
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 125 ESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
+ C LQGF ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 185 ATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPG 244
+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 245 QLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAAC 303
LN DL + N+VP+PR+HF + +AP+ S + LTV E+T F+ N M C
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKC 2
>05902
Length = 1127
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 158/282 (56%), Gaps = 12/282 (4%)
Frame = +2
Query: 154 KIREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 212
K+ + +P +++ T+SV P+ ++SD VV+PYN+ L++ +L +N D +DN AL I
Sbjct: 74 KLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAA 253
Query: 213 RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 272
L + TPT+ +N LVS MS TT LR+PG +N DL L +++P PRLHF M G+ P
Sbjct: 254 DRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTP 433
Query: 273 LTSRGS-QQYRALTVPELTQQVFDAKNMMAACDPRHGR----YLTVAAVFRGRMSMKEVD 327
LT+ R TV ++ +++ KNMM + P H + Y+++ + +G + +V
Sbjct: 434 LTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQVH 610
Query: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMAVTFIGNSTAIQELFKRISEQ 384
+ + ++ + + F+ W P +++ A+ P +++ + N T+I LF+RI Q
Sbjct: 611 KSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSISHLFERILRQ 790
Query: 385 FTAMFRRKAFLHWYTGEGM--DEM-EFTEAESNMNDLVSEYQ 423
+ + +R+AF+ + E + D + EF + + LV EYQ
Sbjct: 791 YDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>06360
Length = 1896
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Frame = -1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--DRISVYYNEATGGK 58
MRE + + GQ G Q+G WE+ EHGI P G D + D + +++E GK
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 119 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSD 177
+RK A+ C LQGF ++ +Y + F++ P+P+VSD
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSD 1174
>03702
Length = 1932
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Frame = +1
Query: 167 FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLN 226
F++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P Y +LN
Sbjct: 1501 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPXYTNLN 1680
Query: 227 HLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG-FAPLTSRGSQQYRALT 285
L+ +S +T LRF G LN DL + N+VP P H PG P+ S + LT
Sbjct: 1681 RLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCPVISAEKAYHEQLT 1854
Query: 286 VPELTQQVFDAKNMMAACDP 305
V E+T F+ N + CDP
Sbjct: 1855 VAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 8/117 (6%)
Frame = +3
Query: 316 VFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAVTF 367
++RG + K+V+ + ++ K + FV+W P K + PP ++ AV
Sbjct: 6 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 185
Query: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 186 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 356
>29025
Length = 395
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 412 ESNMNDLVSEYQQYQD 427
ESNMNDLVSEYQQYQD
Sbjct: 354 ESNMNDLVSEYQQYQD 307
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|9790237|ref|NP_062684.1| SMC1 structural maintenance
of chromosomes 1-like 1 [Mus musculus]
(1233 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08718 404 e-132
00063 105 9e-23
09495 100 4e-21
35107 98 3e-20
19618 33 0.50
12308 31 2.9
15478 31 3.3
20290 30 5.7
>08718
Length = 1556
Score = 404 bits (1039), Expect(2) = e-132, Method: Compositional matrix adjust.
Identities = 198/305 (64%), Positives = 254/305 (83%), Gaps = 3/305 (0%)
Frame = +3
Query: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVME 482
QK +E+EEN+KRIEKL+EYI TS + +EQ++ E +L+ EV A R++ I++EL+ + E
Sbjct: 114 QKDKEMEENKKRIEKLQEYIRTSTIAQQEQRESELQLSSEVGAASGRVESIDEELSGIQE 293
Query: 483 QLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNM 542
QLG A++D+ ESSR RKAE++E++KRL+PG V+GRLID C+P+ K+YQ+A+TKVLGK M
Sbjct: 294 QLGQAKVDKHESSRAVRKAELLENLKRLFPG-VHGRLIDQCEPSHKRYQVAITKVLGKYM 470
Query: 543 DAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLREL---KGAKLVIDVIR 599
DAI+ DSEKT +DCIQY+KEQR EPETFLPLDYL V +EKLR++ K KLVIDVIR
Sbjct: 471 DAIVCDSEKTAKDCIQYMKEQRIEPETFLPLDYLHVTNVNEKLRDIQEPKNVKLVIDVIR 650
Query: 600 YEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDL 659
Y+PP IKKAL +ACGNALVC++VEDARR+AF GH+RHK+VALDGTLFQKSGVISGGASDL
Sbjct: 651 YDPPVIKKALLFACGNALVCESVEDARRVAFAGHERHKSVALDGTLFQKSGVISGGASDL 830
Query: 660 KAKARRWDEKAVDKLKEKKGRLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDL 719
+AKARRWDEK +++LK +K +L EE KE +K +RKE+EL V+SQ GL+ RLKYSQ+DL
Sbjct: 831 RAKARRWDEKMLNQLKARKEKLMEERKEALKKQRKESELNTVRSQIKGLETRLKYSQNDL 1010
Query: 720 EQTKT 724
E TK+
Sbjct: 1011ETTKS 1025
Score = 85.9 bits (211), Expect(2) = e-132, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 64/85 (75%)
Frame = +2
Query: 742 ANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRNIREFEEEKVKRQN 801
+F PR++++ R++ R +++ LK+KMN+VEDEVF +FC IGV NIR +EE +++ Q
Sbjct: 1073 TSFDPRMDELDRMMSERGDDLRHLKDKMNRVEDEVFADFCTMIGVPNIRHYEERELRAQQ 1252
Query: 802 EIAKKRLEFENQKTRLGIQLDFEKN 826
E AKKRL+FENQK +L Q++ EK+
Sbjct: 1253 ERAKKRLDFENQKFKLQNQIECEKS 1327
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +2
Query: 207 DRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKN 246
+RYQRL +++ Q+ LQLFKL+ V + L KELA KN
Sbjct: 1388 ERYQRLNEQLAEKQLHLQLFKLFTMNVRLTILRKELAKKN 1507
>00063
Length = 499
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 93/141 (65%)
Frame = +2
Query: 290 ELNQKRPQYIKAKENTSHKIKKLEAAKKSLQHAQKHYKKRKGDMDELEKEMLSVEKAXXX 349
ELN+KRP YIKAKE T+H +K+E +++SL+ ++K ++ + + E+E ++ VE++
Sbjct: 65 ELNKKRPVYIKAKEKTTHMQRKVENSRRSLKQSRKKHENHEQIIREMEADLEQVEQSRQA 244
Query: 350 XXXXXXXXXXXXGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDL 409
GR L LE++QV++Y+RLKEEA +RAA QELE R+QK+DQDR D
Sbjct: 245 YEDRMEEESQSQGRSLQLEDSQVQQYNRLKEEAGRRAAKYMQELESITREQKSDQDRYDN 424
Query: 410 EERKKVETEAKIKQKLREIEE 430
E RKK E AKI+QK IE+
Sbjct: 425 ELRKKNELLAKIQQKRDRIED 487
>09495
Length = 1177
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 86/157 (54%), Gaps = 14/157 (8%)
Frame = -3
Query: 10 ENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGA 68
ENFKSY G Q +GPF + FT+I+GPNGSGKSN++D++ FV G + + +R K + LIH +
Sbjct: 1001 ENFKSYAGVQTLGPFHKSFTSIVGPNGSGKSNVIDSMLFVFGYRANKIRSKKVSVLIHNS 822
Query: 69 ----PVGKPAANRAFVSMVYSEEGAEDRTF---ARVIVG------GSSEYKINNKVVQLH 115
+G F +V + G ++ T ++++V +S Y +N K
Sbjct: 821 ENHRDMGSCCVAVHFQKIVDTGPGEDEYTVVPDSKIVVARTAFKDNTSSYSVNGKRATYK 642
Query: 116 EYSEELEKLGILIKARNFLVFQGAVESIAMKNPKERT 152
E + L GI + FL+ QG VE IAM PK ++
Sbjct: 641 EVAALLRGSGIDLDHNRFLILQGEVEQIAMMKPKAQS 531
>35107
Length = 679
Score = 97.8 bits (242), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 103/185 (55%), Gaps = 1/185 (0%)
Frame = +2
Query: 993 AQAEEEIKQEMNTLQQKLNERQSV-LQRIAAPNMKAMEKLESVRDKFQETSDEXXXXXXX 1051
A E + + L + + E++ + L R+A ++++ VRDK ++ +E
Sbjct: 50 AGGETRSDETQHGLHR*VQEKEELYLSRVAE-----LDQITEVRDKQRKYHEE------- 193
Query: 1052 XXXXXXXXXXIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGI 1111
++K+R D F F + + E+Y+ ++ A+ L + +P+ +GI
Sbjct: 194 ----------LRKQRLDEFMTGFAVITGKLKEMYQMITLGGDAELEL--VDSLDPFSEGI 337
Query: 1112 NYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVA 1171
++ P K ++ + NLSGGEKT+++LAL+FA+H YKP P +V+DEIDAALD N+ VA
Sbjct: 338 VFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVA 517
Query: 1172 NYIKE 1176
NYIK+
Sbjct: 518 NYIKD 532
>19618
Length = 974
Score = 33.5 bits (75), Expect = 0.50, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 1125 MDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKE 1176
+D LSGGEK A+A LF Y F +LDE +A+ GK+ +Y +E
Sbjct: 188 IDVLSGGEKQRIAMARLF----YHKPQFAILDECTSAVSVDVEGKMYSYCRE 331
>12308
Length = 698
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 1125 MDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKE 1176
MD LSGGEK A+A LF Y F +LDE +A+ G + Y +E
Sbjct: 153 MDVLSGGEKQRIAMARLF----YHKPQFAILDECTSAVSVDVEGFMYQYSRE 10
>15478
Length = 1282
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Frame = +1
Query: 71 GKPAANRAFVSMVYSEEGAEDRTFA-----------RVIVGGSSEYKINNKVVQLHEYSE 119
G+ +A VS+ + + + +V++GG ++Y IN + +
Sbjct: 55 GQAGVTKATVSITFDNQDKKQSPLGYEQYDEIVVTRQVVIGGRNKYLINGSNANNNRVQD 234
Query: 120 ELEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEIS 159
+ + + +FL+ QG + + P E ++ EE +
Sbjct: 235 LFRSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMIEEAA 354
>20290
Length = 1550
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 1127 NLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDN 1164
NLSGGE AL L KPA +++DE A LD+
Sbjct: 1044 NLSGGELQRVALVLCLG----KPADVYLIDEPSAYLDS 1145
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|117938334|ref|NP_033286.2| spectrin beta 2 isoform 2
[Mus musculus]
(2154 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19002 462 e-130
34010 162 3e-45
26578 180 5e-45
17613 108 8e-39
19147 128 5e-30
28965 105 2e-22
29446 90 9e-18
05733 72 2e-12
34417 69 2e-11
09711 65 4e-10
38533 64 7e-10
22703 60 8e-09
32371 41 2e-08
09100 54 5e-07
17567 50 9e-06
04951 45 2e-04
18202 44 8e-04
32088 37 0.061
18556 35 0.25
>19002
Length = 842
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/280 (77%), Positives = 244/280 (87%)
Frame = -2
Query: 71 DGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNH 130
DG+ML+KLLEV + KG+MRIHCLENVDKAL FL EQRVHLENMG+HDIVDG+
Sbjct: 841 DGKMLMKLLEVRVRGEIASDXKGKMRIHCLENVDKALTFLHEQRVHLENMGAHDIVDGSS 662
Query: 131 RLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWR 190
RLTLGLIWTIILRFQIQDI +E DN E KSAKDALLLWCQMKTAGYPNVN+ NFTTSWR
Sbjct: 661 RLTLGLIWTIILRFQIQDIMIEEVDNSETKSAKDALLLWCQMKTAGYPNVNVRNFTTSWR 482
Query: 191 DGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDE 250
DG+AFNA+IHKHRPDL+ +D+L KS+A NLQNAF +AE LGLT LL+PED++V++PDE
Sbjct: 481 DGLAFNAIIHKHRPDLVQYDRLHKSSAIQNLQNAFTVAEDKLGLTALLEPEDVNVEYPDE 302
Query: 251 KSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTII 310
KSIITYVVTYYHYFSKMKA +V+GKRIGKV+DNAI TE IE+YE+L SDLLEWIEQTI+
Sbjct: 301 KSIITYVVTYYHYFSKMKADSVQGKRIGKVIDNAINTENSIEEYETLTSDLLEWIEQTIV 122
Query: 311 ILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLE 350
IL +R+FANSL GVQQQL AFNTYR VEKPPKF EKGNLE
Sbjct: 121 ILRDRQFANSLTGVQQQLAAFNTYRIVEKPPKFDEKGNLE 2
>34010
Length = 832
Score = 162 bits (411), Expect(2) = 3e-45, Method: Compositional matrix adjust.
Identities = 76/119 (63%), Positives = 97/119 (81%)
Frame = +3
Query: 1926 KPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKHYASEEIKEKLLQLTEK 1985
KPRDVS VELLMNNHQ +KAEIDAR ++F CI LG+ LL RKHY EE++EKL+QLT +
Sbjct: 84 KPRDVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLLNRKHYRQEEVREKLIQLTLE 263
Query: 1986 RKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEKLIK 2044
R +M D W+DRWE L+LILEV+QF+RDA+VAEAWL+ QE Y ++++G ++D VE LIK
Sbjct: 264 RLDMTDLWKDRWEHLQLILEVYQFARDAAVAEAWLVAQEQYFLNQDLGDTLDAVENLIK 440
Score = 40.0 bits (92), Expect(2) = 3e-45, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 1898 GDKFRFFSMVRDLMLWMEDVIRQIEAQEKP 1927
D +RF M DL LWM+D+IRQ+ QE P
Sbjct: 1 SDFYRFMLMAHDLHLWMDDIIRQMNTQENP 90
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Frame = +3
Query: 1078 PNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQG----QTDAQYMFLRQRLQA 1133
P ++ E L+ H+++K EID EE++ ++G + Q + + ++ L+
Sbjct: 87 PRDVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLLNRKHYRQEEVREKLIQLTLER 266
Query: 1134 LDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEA 1193
LD + +W++R L QF RD AEA+L QE + ++ TL+ E
Sbjct: 267 LD-----MTDLWKDRWEHLQLILEVYQFARDAAVAEAWLVAQEQYFLNQDLGDTLDAVEN 431
Query: 1194 AIKKQEDFMTTMDA 1207
IK + + A
Sbjct: 432 LIKSMKPLKSCCHA 473
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 57/122 (46%)
Frame = +3
Query: 655 KDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSXXXXXXXXXXXXQWA 714
+D++ V L++ H++ + E+ R +F I G D++ +H+ +
Sbjct: 90 RDVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLLNRKHYRQEEVREKLIQLTLERL 269
Query: 715 NLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHK 774
++ L R + L+ ++QF DA +AW++ + + D+G + ++L+K K
Sbjct: 270 DMTDLWKDRWEHLQLILEVYQFARDAAVAEAWLVAQEQYFLNQDLGDTLDAVENLIKSMK 449
Query: 775 DV 776
+
Sbjct: 450 PL 455
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Frame = +3
Query: 1503 NLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNAEAIRQRLA------- 1555
++ V+LL+ +Q+L+ EI + ++++ + E +R++L
Sbjct: 93 DVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLL-NRKHYRQEEVREKLIQLTLERL 269
Query: 1556 DLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAV 1615
D+ LW + R L+ + Q+ DAA AEAW+ QE Y ++++ +
Sbjct: 270 DMTDLW-------KDRWEHLQLILEVYQFARDAAVAEAWLVAQEQYFLNQDLGDTLDAVE 428
Query: 1616 SMLKKHQILEQAV 1628
+++K + L+
Sbjct: 429 NLIKSMKPLKSCC 467
>26578
Length = 430
Score = 180 bits (457), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 111/133 (83%)
Frame = +1
Query: 1676 ERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTG 1735
ERRGKL+E +L+ L+RE+ DL QWIAE+ +VAGS++ GQDYEHV+ML+E+F+EFARDT
Sbjct: 1 ERRGKLEEVFKLYTLHREIYDLLQWIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTE 180
Query: 1736 NIGQERVDTVNNMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH 1795
++GQERV + N + D+LI HSD+A+IAEWKD +NEAWADLLELIDTRTQ+L +S+ELH
Sbjct: 181 SMGQERVASANEICDQLIALDHSDSASIAEWKDNVNEAWADLLELIDTRTQLLQSSWELH 360
Query: 1796 KFYHDAKEIFGRI 1808
KF ++ K+ RI
Sbjct: 361 KFLYECKDTLERI 399
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Frame = +1
Query: 828 RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN 887
R+ L++ LY + E WI EK + + E + +++ +F+ + +
Sbjct: 4 RRGKLEEVFKLYTLHREIYDLLQWIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTES 183
Query: 888 QAS-RVAVVNQIARQLMHNGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQN 946
RVA N+I QL+ H I +D +N W+ EL+D + L S+ +
Sbjct: 184 MGQERVASANEICDQLIALDHSDSASIAEWKDNVNEAWADLLELIDTRTQLLQSSWELHK 363
Query: 947 YHLECNET 954
+ EC +T
Sbjct: 364 FLYECKDT 387
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 723 RKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHKDVAEEITN 782
R+ +LEE L+ + D+ W+ + + SND G D L ++ K+ A + +
Sbjct: 4 RRGKLEEVFKLYTLHREIYDLLQWIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTES 183
Query: 783 YR----PTIDTLHEQASALPQAHAESPDVKGRLAGIEERCKEMAELTRLRKQALQDTLAL 838
+ + + +Q AL H++S + + E ++ EL R Q LQ + L
Sbjct: 184 MGQERVASANEICDQLIALD--HSDSASIAEWKDNVNEAWADLLELIDTRTQLLQSSWEL 357
Query: 839 YKMFSEA 845
+K E
Sbjct: 358 HKFLYEC 378
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = +1
Query: 640 WIREKEKILSSDDYGKDLTSVMRLLSKHRAF-EDEMSGRSGHFEQAIKEGEDMIAEEHFG 698
WI EK + S+D G+D V L + + F D S A + + +IA +H
Sbjct: 73 WIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTESMGQERVASANEICDQLIALDHSD 252
Query: 699 SXXXXXXXXXXXXQWANLEQLSAIRKKRLEEASLLHQFQADADD 742
S WA+L +L R + L+ + LH+F + D
Sbjct: 253 SASIAEWKDNVNEAWADLLELIDTRTQLLQSSWELHKFLYECKD 384
>17613
Length = 1108
Score = 108 bits (269), Expect(2) = 8e-39, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Frame = +3
Query: 222 QNAFNLAEQHLGLTKLLDPED-ISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKV 280
Q+ F +HL + ++LDPED ++ PDE+S++ YV +YYH FS + RI KV
Sbjct: 366 QHCF*HRRKHLDIPRMLDPEDMVNSAKPDERSVMAYVSSYYHAFSGAQQAETAANRICKV 545
Query: 281 LDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKP 340
L E E+++E+YE LASDLLEWI +T L NR N+L G + +L F YR +KP
Sbjct: 546 LKVNQENERLMEEYERLASDLLEWIRRTRPWLENRVTDNTLPGTRHKLDEFRDYRRKQKP 725
Query: 341 PKFTEKGNLEVL 352
P + + + L
Sbjct: 726 PSWRTRPSWRTL 761
Score = 73.2 bits (178), Expect(2) = 8e-39, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Frame = +1
Query: 95 MRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETE 154
MR H + NV+KAL ++ QR G HR R + DI + +
Sbjct: 4 MRFHKIANVNKALDYIDLQRGQ----------TGLHRSRRN-----C*RQRKDDIRYDLD 138
Query: 155 D---------NKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPD 205
+ + + + ++ KTA Y NVN+ NF S++DG+AF ALIH+HRP+
Sbjct: 139 NYPQVCHPRHHSRRTHCQRRTVIVVPAKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPE 318
Query: 206 LIDFDKLKKSNAHYNLQNAFNLAE 229
LID+ L K N NL AF++AE
Sbjct: 319 LIDYHSLSKDNPLENLNTAFDIAE 390
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = +2
Query: 341 PKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNE 400
PK +K LE T+Q+++R +N+ Y+P EGK++SDI AW+ LE AE E L +E
Sbjct: 725 PKLEDKAKLENSFNTLQTRLRLSNRPAYLPTEGKMVSDIANAWKGLEHAEKGFEEWLLSE 904
Query: 401 LIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFG-FDLPAVEAATKKHEAIETDI 458
L R E+L+ LA++F K + E W + ++ +F L ++A KKHEA E+D+
Sbjct: 905 LQRLERLDHLAQKFRHKCEIHEEWSQGKEDMLQSRDFKQCRLNELKAMKKKHEAFESDL 1081
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 2008 QFSRDASVAEAWLLGQEPYLSSREIGQS-VDEVEKLIKRHEAFEKSAATWDER 2059
+F + E W G+E L SR+ Q ++E++ + K+HEAFE A +R
Sbjct: 941 KFRHKCEIHEEWSQGKEDMLQSRDFKQCRLNELKAMKKKHEAFESDLAAHQDR 1099
>19147
Length = 474
Score = 128 bits (321), Expect(2) = 5e-30, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 80/107 (74%)
Frame = +1
Query: 108 QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL 167
++ + V L ++G+ +IVDGN ++TLG+IWTIILRF IQDI+VE + +AK+ LL
Sbjct: 46 SYIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDITVE------ELTAKEGLL 207
Query: 168 LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKK 214
LWCQ KTA Y NVN+ NF S++DG+AF ALIH+HRP+LID+ L K
Sbjct: 208 LWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPELIDYHSLSK 348
Score = 23.5 bits (49), Expect(2) = 5e-30, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 94 RMRIHCLENVDKALQFLKEQR 114
+MR H + NV+KAL+ + QR
Sbjct: 3 KMRFHKIANVNKALELHRLQR 65
>28965
Length = 421
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 90/141 (63%)
Frame = +2
Query: 882 EPEMNNQASRVAVVNQIARQLMHNGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSA 941
+ ++ N +V VN +A QL+ +GHP E+ IR +Q+++N W + R+L +++ L A
Sbjct: 2 QKDLQNHEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGA 181
Query: 942 LSIQNYHLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSD 1001
IQ ++ + +ET +WI+EK V+ ST D G DLA V LQRK G+ERDL A+E K++
Sbjct: 182 HEIQRFNRDADETIAWIQEKDAVL-STDDYGRDLASVQTLQRKHEGVERDLAALEEKVNA 358
Query: 1002 LQKEAEKLESEHPDQAQAILS 1022
L E+ +L+ H DQ++ I S
Sbjct: 359 LGTESVRLQGIHGDQSEQIHS 421
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Frame = +2
Query: 1739 QERVDTVNNMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFY 1798
+++V VN +A++L+ GH + TI + ++ +NEAW L +L R + L ++E+ +F
Sbjct: 23 EDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFN 202
Query: 1799 HDAKEIFGRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARL 1857
DA E IQ+K L ++ GRD +V+TLQR H E D+ AL +V L ++ RL
Sbjct: 203 RDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGTESVRL 382
Query: 1858 QAAYAGDKADDI 1869
Q + GD+++ I
Sbjct: 383 QGIH-GDQSEQI 415
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%)
Frame = +2
Query: 1518 QKEIQGHQPRIDDIFERSQNIITDSSSLNAEAIRQRLADLKQLWGLLIEETEKRHRRLEE 1577
QK++Q H+ ++ ++ ++ ++TD E IRQ+ ++ + W L + + R RL
Sbjct: 2 QKDLQNHEDKVVEVNTLAEQLVTDGHP-EEETIRQKQEEVNEAWKRLRQLSLLRQERLYG 178
Query: 1578 AHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAETVHQ 1637
AH+ Q++ DA E AW+ E++ + +++ +D S ++ +KH+ +E+ + E V+
Sbjct: 179 AHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNA 358
Query: 1638 LSKTSRALVADSHPESERI 1656
L S L +SE+I
Sbjct: 359 LGTESVRLQGIHGDQSEQI 415
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 65/119 (54%)
Frame = +2
Query: 1628 VEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRL 1687
++++ + V +++ + LV D HPE E I +Q +V++ + L+ L+ R+ +L H +
Sbjct: 11 LQNHEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEI 190
Query: 1688 FQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVN 1746
+ NR+ D+ WI E++ V + + G+D V LQ + RD + +E+V+ +
Sbjct: 191 QRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAAL-EEKVNALG 364
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%)
Frame = +2
Query: 713 WANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKK 772
W L QLS +R++RL A + +F DAD+ AW+ + ++S++D G D S Q+L +K
Sbjct: 128 WKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRK 307
Query: 773 HKDVAEEITNYRPTIDTLHEQASALPQAHAESPD 806
H+ V ++ ++ L ++ L H + +
Sbjct: 308 HEGVERDLAALEEKVNALGTESVRLQGIHGDQSE 409
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%)
Frame = +2
Query: 563 DIAIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRVAHMEFCYQELCQXXXXXXXXXX 622
D+ ++V VN A++ TDG + + IR + + ++ L Q
Sbjct: 8 DLQNHEDKVVEVNTLAEQLVTDGH----PEEETIRQKQEEVNEAWKRLRQLSLLRQERLY 175
Query: 623 XXXXXWKFFWEMAEEEGWIREKEKILSSDDYGKDLTSVMRLLSKHRAFEDEMSG 676
+F + E WI+EK+ +LS+DDYG+DL SV L KH E +++
Sbjct: 176 GAHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAA 337
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 378 DINKAWERLEKAEHERELALRNELIRQEKL--EQLARRFDRKAAMRETWLSENQRLVSQD 435
++N+AW+RL R+L+L +RQE+L +RF+R A W+ E ++S D
Sbjct: 113 EVNEAWKRL------RQLSL----LRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTD 262
Query: 436 NFGFDLPAVEAATKKHEAIETDI 458
++G DL +V+ +KHE +E D+
Sbjct: 263 DYGRDLASVQTLQRKHEGVERDL 331
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 59/105 (56%)
Frame = +2
Query: 1326 QLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDANKAELFTQSCADLDKWLHG 1385
QL+++ E +++K +++ W+ L + + +RL+ A++ + F + + W+
Sbjct: 59 QLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQE 238
Query: 1386 LESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQSQA 1430
++ + +DDYG+DL SV L +K + +E + ++++ L +++
Sbjct: 239 KDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGTES 373
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +2
Query: 1464 RKHNLLASKEIHQFNRDVEDEILWVGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQG 1523
R+ L + EI +FNRD ++ I W+ E+ + ++ D+G +L +VQ L +K++ +++++
Sbjct: 158 RQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAA 337
Query: 1524 HQPRIDDIFERS---QNIITDSS 1543
+ +++ + S Q I D S
Sbjct: 338 LEEKVNALGTESVRLQGIHGDQS 406
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +2
Query: 989 ERDLVAIEAKLSDLQKEAEKLESE-HPDQAQAILSRLAEISDVWEEMKTTLKNREASLGE 1047
++DL E K+ ++ AE+L ++ HP++ + I + E+++ W+ ++ R+ L
Sbjct: 2 QKDLQNHEDKVVEVNTLAEQLVTDGHPEE-ETIRQKQEEVNEAWKRLRQLSLLRQERLYG 178
Query: 1048 ASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEE 1103
A ++Q+F RD D+ +W+ ++++D L + L +HE ++ ++ EE
Sbjct: 179 AHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEE 346
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%)
Frame = +2
Query: 1952 DSFTACIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSR 2011
D L + L+ H E I++K ++ E K + R E L E+ +F+R
Sbjct: 26 DKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNR 205
Query: 2012 DASVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSA 2062
DA AW+ ++ LS+ + G+ + V+ L ++HE E+ A +E+ +A
Sbjct: 206 DADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNA 358
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +2
Query: 1095 KNEIDNYEEDYQKMRDMGE-MVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLS 1153
+ ++ N+E+ ++ + E +VT G + + +RQ+ + ++ W L ++ RQ L
Sbjct: 2 QKDLQNHEDKVVEVNTLAEQLVTDGHPEEET--IRQKQEEVNEAWKRLRQLSLLRQERLY 175
Query: 1154 QSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKIN 1213
+H Q+F RD + A++ ++ VL+ + L + +K E + A EEK+N
Sbjct: 176 GAHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVN 355
Query: 1214 AVVETGRRL 1222
A+ RL
Sbjct: 356 ALGTESVRL 382
Score = 37.0 bits (84), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Frame = +2
Query: 1208 NEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKNREAASELLMRLKDNRDLQKF 1267
+E+K+ V +LV+DG+ + I++K + +++ ++ R+ + RL ++Q+F
Sbjct: 20 HEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRF 199
Query: 1268 LQDCQELSLWINEK--MLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLDKIEKEGM 1325
+D E WI EK +L+ D D A ++ + KH+ +LA+ +E ++ + E +
Sbjct: 200 NRDADETIAWIQEKDAVLSTDDYGRDLA-SVQTLQRKHEGVERDLAALEEKVNALGTESV 376
Query: 1326 QL 1327
+L
Sbjct: 377 RL 382
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%)
Frame = +2
Query: 1869 IQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPR 1928
I++++ EV EAWK L R+ RL + RF + + W+++ + + R
Sbjct: 95 IRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDYGR 274
Query: 1929 DVSSVELLMNNHQGIKAEIDARNDSFTAC 1957
D++SV+ L H+G++ ++ A + A
Sbjct: 275 DLASVQTLQRKHEGVERDLAALEEKVNAL 361
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 517 LQKIFQEMLYIMDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNA 576
+Q+ ++ + W+ E +L + DYG+ L V+ L +KH VE D+A E+V +
Sbjct: 188 IQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGT 367
Query: 577 SAQKF 581
+ +
Sbjct: 368 ESVRL 382
>29446
Length = 1445
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Frame = +3
Query: 42 VQKKTFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTK-GRMRIHCL 100
+QK TFT+W N HL V+ I DL +D DG L+ L+EVLSG++ K R L
Sbjct: 999 IQKNTFTRWANEHLRTVNKAIADLESDFSDGLRLVALIEVLSGKKFKHVNKRPNFRTQKL 1178
Query: 101 ENVDKALQFLK-EQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETED---N 156
ENV L+FL+ ++ + + N+ S DIVD +L LGLIWT+IL + I E E+ +
Sbjct: 1179 ENVTLTLKFLEDDEGIRIVNIDSTDIVDKKLKLILGLIWTLILHYSISMPMWEGEEPTPS 1358
Query: 157 KEKKSAKDALLLWCQMKTA 175
+ + K LL W Q K
Sbjct: 1359 EGGPTPKQRLLNWIQSKVP 1415
>05733
Length = 1021
Score = 72.4 bits (176), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Frame = +2
Query: 165 ALLLWCQ--MKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQ 222
+LL WCQ + Y V+I +FT+SWR G+AF ALIH RP LI L + N Q
Sbjct: 467 SLLRWCQRVLNXGTYRGVHIIDFTSSWRSGLAFCALIHAFRPHLISPASLMECETVKNNQ 646
Query: 223 NAFNLAEQHLGLTKLLDPEDISV-DHPDEKSIITYVVTYYHYF 264
AF++A++ LG+ ++ ED++ PD+ +++ Y+ ++ F
Sbjct: 647 LAFDVAQKELGIAPVMRGEDMAACAVPDKLTMVAYLSQFHELF 775
>34417
Length = 1096
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +2
Query: 186 TTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPED-IS 244
++ W +G+AF ALIH PD D+ +L+ N YN + AF+ AE+ ++ LLD ED I
Sbjct: 38 SSCWNNGLAFCALIHHFYPDAFDYSQLQPQNRRYNFELAFDTAEKLADISPLLDVEDMIK 217
Query: 245 VDHPDEKSIITYVVTYY 261
+ +PD K + TYV ++Y
Sbjct: 218 MKNPDWKCVFTYVQSFY 268
>09711
Length = 3041
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 22/253 (8%)
Frame = +1
Query: 13 LSPAYTGQVPYNYNQLEGRFKQLQD--EREAVQKKTFTKWVNSHLARVSCRITDLYTDLR 70
L+ A+ + NY L+ +++D + E+ ++KT+ W+NS VS + LY+DL
Sbjct: 754 LNLAFVANLFNNYPALDTPQVEVEDVMKEESREEKTYRNWMNS--LGVSPFVHHLYSDLY 927
Query: 71 DGRMLIKLLEVLSGERL------PKPTKGRMRIHCLENVDKALQF---LKEQRVHLENMG 121
DG ++ +L + + + K K + R +EN + A++ +K +V L +
Sbjct: 928 DGLIIFQLYDYIQPGLVDWSKVKKKFNKLKARFERIENCNYAVELGPQVKLVKVKLVGIA 1107
Query: 122 SHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMK------TA 175
DI+DGN LTLGL+W ++ + + +S TE+N K + + ++ W K +
Sbjct: 1108GQDILDGNPVLTLGLVWQLMRAYTLAILSKITENN--KPISDNEIITWVNSKIKKDDRIS 1281
Query: 176 GYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHY-----NLQNAFNLAEQ 230
G+ + ++ DG+ +I +P ++++D + S Y N + A LA +
Sbjct: 1282GFQDRKLN-------DGVIVARVIEAIKPGIVNWDNIDCSARDYQDRLTNARYAIGLARK 1440
Query: 231 HLGLTKLLDPEDI 243
+G PEDI
Sbjct: 1441-IGAGVYALPEDI 1476
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 27/192 (14%)
Frame = +1
Query: 40 EAVQKKTFTKWVNSHLARVS-CR--------ITDLYTDLRDGRMLIKLLEVLSGERLPKP 90
+A ++K F +W+N HL+ C+ T L+ + DG +L KL+ + +
Sbjct: 43 KAGEQKAFAEWINRHLSDXPDCKHLLPLDADGTQLFGQMADGVLLCKLINHSVSNTIDER 222
Query: 91 TKGRMRIHCL---ENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQ 147
T + + EN+ A+ N+G D+ G L LGL+W II +
Sbjct: 223 TINKQNLSLYRRHENLTLAVNSAGAIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLS 402
Query: 148 DISV-------------ETEDNKEKKSAKDALLLWC--QMKTAGYPNVNIHNFTTSWRDG 192
DI++ ET ++ + S + LL W + AG + I NF +D
Sbjct: 403 DINLAHHPGLVNLLLDGETIEDLIRLSPEQILLRWVNYHLNRAGC-DRQIXNFGEDIKDS 579
Query: 193 MAFNALIHKHRP 204
A+ L+ + P
Sbjct: 580 EAYTHLLKQISP 615
>38533
Length = 380
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Frame = +1
Query: 1481 VEDEILWVG-ERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNII 1539
VEDE+ W +R P+A STD G++L VQ L+KK+Q L+ EI H+P ID + +Q +I
Sbjct: 1 VEDELSWYY*DRKPIAESTDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQMI 180
Query: 1540 TDSSSLNAEAIRQRLADL------KQLWGLLIEETEKRHRRLEEA--HKAQQYYFDAAEA 1591
A+ I+ RL DL Q++ LL ++E A AQ++Y + E
Sbjct: 181 RTKHFATAD-IQTRLDDLTSPAQRSQVFYLL--------*KVETAGCFGAQKFYMEVNEV 333
Query: 1592 EAWMSEQ 1598
E WM+E+
Sbjct: 334 ELWMNEK 354
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +1
Query: 741 DDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHKDVAEEITNYRPTIDTLHEQASALPQA 800
D++ + D I S D+G+ + Q+L+KKH+ + EI + P ID + A + +
Sbjct: 7 DELSWYY*DRKPIAESTDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQMIRT 186
Query: 801 -HAESPDVKGRLAGIEERCKEMAELTRLRKQALQDTLALYKMFSEADACELWIDEK 855
H + D++ RL + + L K K + E + ELW++EK
Sbjct: 187 KHFATADIQTRLDDLTSPAQRSQVFYLL*KVETAGCFGAQKFYMEVNEVELWMNEK 354
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 643 EKEKILSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGS 699
+++ I S D G LT+V L+ KH+A E E+ + + MI +HF +
Sbjct: 31 DRKPIAESTDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQMIRTKHFAT 201
Score = 34.7 bits (78), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 1182 TEMPTTLEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSID 1241
T++ +L + +KK + + + A+E I+AV + ++++ + + IQ ++D D
Sbjct: 55 TDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQMIRTKHFATADIQTRLD--D 228
Query: 1242 DRHRKNREAASELLMRLKDNRDL--QKFLQDCQELSLWINEKM 1282
R LL +++ QKF + E+ LW+NEK+
Sbjct: 229 LTSPAQRSQVFYLL*KVETAGCFGAQKFYMEVNEVELWMNEKI 357
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1
Query: 1922 EAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKHYASEEIKEKLLQ 1981
E+ + +++V+ LM HQ +++EI A A + ++ KH+A+ +I+ +L
Sbjct: 49 ESTDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQMIRTKHFATADIQTRLDD 228
Query: 1982 LT 1983
LT
Sbjct: 229 LT 234
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 956 SWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKL 1009
SW K I + DLGN L V L +K +E ++VA E + + A+++
Sbjct: 16 SWYY*DRKPIAESTDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQM 177
>22703
Length = 906
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%)
Frame = -3
Query: 1952 DSFTACIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSR 2011
+ F + G+S +A H+ S+EI+EK+ QL + + +I E R + + LE Q
Sbjct: 886 EPFDKFRKTGRSFIANGHFLSKEIEEKIKQLDQSLEGLIRNLEHRRKLHQQNLEAQQLRH 707
Query: 2012 DASVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSA 2062
+ EAW+ +EP L ++ G+S++ E++++RH+ F K+ ++R +A
Sbjct: 706 EMEQIEAWMNLREPLLKEKKFGESIEGAEEMLRRHD*F*KTVTAQEDRVNA 554
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 52/89 (58%)
Frame = -3
Query: 1127 LRQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPT 1186
+ ++++ LD L + E+R+ L Q+ QQ + +Q EA++N +E +L +
Sbjct: 817 IEEKIKQLDQSLEGLIRNLEHRRKLHQQNLEAQQLRHEMEQIEAWMNLREPLLKEKKFGE 638
Query: 1187 TLEGAEAAIKKQEDFMTTMDANEEKINAV 1215
++EGAE +++ + F T+ A E+++NA+
Sbjct: 637 SIEGAEEMLRRHD*F*KTVTAQEDRVNAL 551
>32371
Length = 625
Score = 41.2 bits (95), Expect(3) = 2e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -2
Query: 204 PDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPED-ISVDHPDE 250
PDLID+D L K N YN AF +AEQ L + L+ D +++ PD+
Sbjct: 549 PDLIDYDSLSKENVLYNNNLAFTVAEQELDIPAFLEAADMVALRTPDK 406
Score = 33.5 bits (75), Expect(3) = 2e-08, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1
Query: 179 NVNIHNFTTSWRDGMAFNALIHKHR 203
+V+I + SWR+G+AF A+IH+ R
Sbjct: 625 SVDIKDLLVSWRNGLAFCAIIHRFR 551
Score = 23.1 bits (48), Expect(3) = 2e-08, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 252 SIITYVVTYYHYFSKMKALAVEG 274
S+ITYV YY+ S + L G
Sbjct: 401 SVITYVSQYYNKLSTLPQLGGPG 333
>09100
Length = 930
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Frame = +1
Query: 43 QKKTFTKWVNSHLARVSCR--ITDLYTDLRDGRMLIKLLEVLSGERLPK----PTK-GRM 95
Q + W+NS L + I DL D+RDG + ++ ++S +++P PT M
Sbjct: 463 QLSAYMAWINSQLKKKPGAHLIEDLRHDMRDGVVFADVIHIVSKQQIPGIQNVPTTLDEM 642
Query: 96 RIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQ 145
R +NVD+ L F+ + R+ + + S DIV+GN + + LI + ++
Sbjct: 643 R----QNVDRVLHFMTQNRIKMHRISSRDIVEGNLKAVMRLILALAAHYK 780
>17567
Length = 448
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%)
Frame = -3
Query: 517 LQKIFQEMLYIMDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNA 576
L +F+E+ I + + E++ ++ +DYGKHL +D+L++H+L EA + RVR +N
Sbjct: 392 LMAMFREIESIQEELKEVQSKVVGEDYGKHLQATQDMLEQHSLQEAQLQALTRRVRKLNR 213
Query: 577 SAQKFATDGEGYKPCDPQVIRDRVAHMEFCYQELCQXXXXXXXXXXXXXXXWKFFWEMAE 636
+Q Q + R+ + + ++F + E
Sbjct: 212 KSQ----------GAQEQSLDKRLEALNAQLNNVQAQSDKRRQGLETAQQYYQFLQDTEE 63
Query: 637 EEGWIREKEKILSSDDYGKD 656
E+ W+ E+ + S GKD
Sbjct: 62 EDRWVGERIDAVRSPSLGKD 3
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 60/121 (49%)
Frame = -3
Query: 1383 LHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQSQAQALSQEGKSTDE 1442
L ++S++ +DYGK L + +L++ + E Q++ + + +L ++Q G
Sbjct: 350 LKEVQSKVVGEDYGKHLQATQDMLEQHSLQEAQLQALTRRVRKLNRKSQ-----GAQEQS 186
Query: 1443 VDSKRLTVQTKFMELLEPLSERKHNLLASKEIHQFNRDVEDEILWVGERMPLATSTDHGH 1502
+D + + + + +R+ L +++ +QF +D E+E WVGER+ S G
Sbjct: 185 LDKRLEALNAQLNNVQAQSDKRRQGLETAQQYYQFLQDTEEEDRWVGERIDAVRSPSLGK 6
Query: 1503 N 1503
+
Sbjct: 5 D 3
>04951
Length = 2852
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Frame = +1
Query: 100 LENVDKALQF---LKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDN 156
+EN + A+Q +K ++ L +G DI DGN LTLGL+W ++ + + +S TED
Sbjct: 7 IENCEYAVQLGPQMKVCKMKLVGIGGKDIHDGNPVLTLGLVWQLMRAYTLAILSKLTED- 183
Query: 157 KEKKSAKDALLL-WCQMKTAGYPNVNIHNFTTS-WRDGMAFNALIHKHRPDLIDFDKLKK 214
KK +D+ ++ W K + I +F S DG+ +I +P +++++ +
Sbjct: 184 --KKPIQDSEIVDWVNSKVK--KDERIGSFQDSKLNDGVIVAKVIESIKPGIVNWENINP 351
Query: 215 SNAH-----YNLQNAFNLAEQHLGLTKLLDPEDI 243
+ + N + A LA + +G PEDI
Sbjct: 352 NASEPDDRLANARYAIGLARK-IGAGVYALPEDI 450
>18202
Length = 424
Score = 43.9 bits (102), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Frame = -1
Query: 45 KTFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVD 104
+ + W NS L V+ + ++ + +++GR+L +L++VL+ P G +
Sbjct: 385 QVYLSWANSVLCEVNSSVENV-SSIQEGRVLCELIDVLA------PEAGLLDKVQASGKS 227
Query: 105 KALQFLKEQRVHLENMG------SHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKE 158
F+ H++N G + DI+DG+ + L ++W +IL + I I +
Sbjct: 226 GQRAFIYAALDHMKNHGIKIVFSTQDIMDGDIKSLLDVMWLLILNYGIHFIG-NNSFQRS 50
Query: 159 KKSAKDALLLWCQ 171
+ K LL WCQ
Sbjct: 49 VGAGKKNLLDWCQ 11
>32088
Length = 1928
Score = 37.4 bits (85), Expect = 0.061, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 25/152 (16%)
Frame = +1
Query: 43 QKKTFTKWVN---------SHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKG 93
++K F W+N HL V+ DL+ + DG +L KL+ + +
Sbjct: 1264 EQKAFAAWINRHLKDDPDCKHLMEVNEEGDDLFKKVGDGILLCKLINHSVSNTIDERAIN 1443
Query: 94 RMRI---HCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDIS 150
+ + H EN+ A+ N+G D+ G L LGL+W II + DI+
Sbjct: 1444 KSNLNVYHRHENLTLAVNSAGSIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLSDIN 1623
Query: 151 V-------------ETEDNKEKKSAKDALLLW 169
+ ET ++ + S ++ LL W
Sbjct: 1624 LAHHPGLVNLLREGETIEDFMRLSPEEILLRW 1719
>18556
Length = 799
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 165 ALLLWCQMKTAGYP-NVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQN 223
+LL W ++ A Y + + +R+G ALI + RPDLID+ K + +
Sbjct: 44 SLLRWISVQLAAYQFTAELKEPSDVFRNGRVLCALISRFRPDLIDYAATKDMSPLECNEL 223
Query: 224 AFNLAEQHLGLTKLL 238
AF + E+ L + +++
Sbjct: 224 AFAVLERELHIDRIM 268
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|19527028|ref|NP_598569.1| high density lipoprotein
binding protein [Mus musculus]
(1268 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05665 463 e-130
13185 309 4e-84
31560 146 3e-56
13631 85 2e-16
09451 40 0.005
03467 39 0.015
09541 37 0.036
30669 36 0.11
26269 33 0.84
04763 33 0.91
18876 32 2.0
>05665
Length = 1610
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/428 (54%), Positives = 311/428 (72%), Gaps = 3/428 (0%)
Frame = -3
Query: 37 PPTYKDAFPPLPEKAACLESAQEPAGAWSNKIRPIKASVITQVFHVPLEERKYKDMNQ-- 94
PPTY AFP L + L A + AW K + + S TQVF VP+ ER++K++N+
Sbjct: 1407 PPTYDAAFPALTTEPRPLNPALS-SSAWQPKFQA-RVSKCTQVFTVPMVERRFKEVNEHR 1234
Query: 95 FG-EGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASA 153
FG E +QAKIC +IM + G +E+SLA+DQ ++++++G+ D+VMKAR+++V +LQTQA
Sbjct: 1233 FGDESDQAKICKDIMAKYGVAIEISLARDQSMTVVINGRSDSVMKARREVVGKLQTQAVY 1054
Query: 154 TVPIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVL 213
V IP+EHHRFV+GK+G+KLQ+LEL T+TKI IPR D+ S+ IKI+GTKEGIEKARHE+
Sbjct: 1053 QVKIPREHHRFVLGKSGKKLQELELATSTKITIPRTDENSDVIKISGTKEGIEKARHELE 874
Query: 214 LISAEQDKRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPSVNRTEIVFTGE 273
IS EQ KRA ERL V+KAFHPFI GP+N+ V + ++ETG IN+PP SVN+ EIV +GE
Sbjct: 873 CISEEQSKRAFERLPVQKAFHPFICGPFNQNVKQWIEETGASINVPPASVNKDEIVVSGE 694
Query: 274 KEQLAQAVARXXXXXXXXXXXXXXXXXXXXXSQHKYVIGPKGNSLQEILERTGVSVEIPP 333
KE +A+ + +QH+YVIGP+GN +QEIL+ V++++PP
Sbjct: 693 KEGVAKCIQNIMRIYEEKKRKCQNGSLWK*ETQHRYVIGPRGNGIQEILQHCDVALDVPP 514
Query: 334 SDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVSAPSWLHRFIIGKKGQNLAKITQQ 393
DS SET+ LRGE +KLG ALT VY+KANS + S V APSWLHRFIIGKKG N+ +IT++
Sbjct: 513 LDSPSETITLRGEQDKLGPALTMVYSKANSVSTSEVMAPSWLHRFIIGKKGANIRRITEE 334
Query: 394 MPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGK 453
PKVHIEFTEG+DKIT+EG E+V A +E +V DL NRMDY EI +D KFH+H+IGK
Sbjct: 333 HPKVHIEFTEGQDKITVEGSPEEVQEAILALEVIVTDLKNRMDYAEIEVDPKFHKHIIGK 154
Query: 454 SGANINRI 461
+GAN ++
Sbjct: 153 NGANSKKL 130
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 176/387 (45%), Gaps = 12/387 (3%)
Frame = -3
Query: 162 HRFVIGKNGEKL-QDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQD 220
HRF + K+ +D+ K I+I D S + I G + + KAR EV+ +
Sbjct: 1239 HRFGDESDQAKICKDIMAKYGVAIEISLARDQSMTVVINGRSDSVMKARREVV---GKLQ 1069
Query: 221 KRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQA 280
+AV ++++ + H F+ G + + E+ T T+I IP N I +G KE + +A
Sbjct: 1068 TQAVYQVKIPREHHRFVLGKSGKKLQELELATSTKITIPRTDENSDVIKISGTKEGIEKA 889
Query: 281 VARXXXXXXXXXXXXXXXXXXXXXSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISET 340
+ H ++ GP ++++ +E TG S+ +PP+ +
Sbjct: 888 -RHELECISEEQSKRAFERLPVQKAFHPFICGPFNQNVKQWIEETGASINVPPASVNKDE 712
Query: 341 VILRGEPEKLGQALTEVYAKANSFTVSSVSAPSW----LHRFIIGKKGQNLAKITQQMPK 396
+++ GE E + + + + + W HR++IG +G + +I Q
Sbjct: 711 IVVSGEKEGVAKCIQNIMRIYEEKKRKCQNGSLWK*ETQHRYVIGPRGNGIQEILQ---- 544
Query: 397 VHIEFTEGEDKITLEGPTEDVNVAQEQIE-----GMVKDLINRMDYVEINIDHKFHRHLI 451
H + D L+ P+E + + EQ + MV N + E+ HR +I
Sbjct: 543 -HCDV--ALDVPPLDSPSETITLRGEQDKLGPALTMVYSKANSVSTSEVMAPSWLHRFII 373
Query: 452 GKSGANINRIKDQY-KVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENER-T 509
GK GANI RI +++ KV + +E + I +EG P+ VQ+A L + + ++N
Sbjct: 372 GKKGANIRRITEEHPKVHIEF---TEGQDKITVEGSPEEVQEAILALEVIVTDLKNRMDY 202
Query: 510 KDLIIEQRFHRTIIGQKGERIREIRDK 536
++ ++ +FH+ IIG+ G +++ K
Sbjct: 201 AEIEVDPKFHKHIIGKNGANSKKLFSK 121
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 164/370 (44%), Gaps = 3/370 (0%)
Frame = -3
Query: 376 HRFIIGKKGQNLAKITQQMPKVHIEFTEGEDK---ITLEGPTEDVNVAQEQIEGMVKDLI 432
HRF + K V IE + D+ + + G ++ V A+ ++ G ++
Sbjct: 1239 HRFGDESDQAKICKDIMAKYGVAIEISLARDQSMTVVINGRSDSVMKARREVVGKLQT-- 1066
Query: 433 NRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQ 492
++ I + HR ++GKSG + ++ + IP E S++I+I G +G+++
Sbjct: 1065 --QAVYQVKIPREHHRFVLGKSGKKLQELELATSTKITIPRTDENSDVIKISGTKEGIEK 892
Query: 493 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD 552
A+ EL ++ + L +++ FH I G + +++ ++ IN P + D
Sbjct: 891 ARHELECISEEQSKRAFERLPVQKAFHPFICGPFNQNVKQWIEE-TGASINVPPASVNKD 715
Query: 553 IVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHXXXXXXXXXXXXXXREESN 612
+ + G K V KC + + ++ + + S+ + H + +
Sbjct: 714 EIVVSGEKEGVAKCIQNIMRIYEEKKRKCQNGSLWK*ETQHRYVIGPRGNGIQEILQHCD 535
Query: 613 TKIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTK 672
+D+P +S SETI + G++ A + + S +++ EV P+ LH +IG K
Sbjct: 534 VALDVPPLDSPSETITLRGEQDKLGPALTMVYS---KANSVSTSEVMAPSWLHRFIIGKK 364
Query: 673 GRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDI 732
G IR I EE VHI F G D + + G +V++A L + + + + +I
Sbjct: 363 GANIRRITEEHPKVHIEF---TEGQDKITVEGSPEEVQEAILALEVIVTDLKNRMDYAEI 193
Query: 733 RAKPEYHKFL 742
P++HK +
Sbjct: 192 EVDPKFHKHI 163
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 179/403 (44%), Gaps = 1/403 (0%)
Frame = -3
Query: 672 KGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVD 731
+ ++ + IM + G V I + S TVVI G S V KA+++++ + QT++
Sbjct: 1215 QAKICKDIMAKYG-VAIEISLARDQSMTVVINGRSDSVMKARREVV---GKLQTQA-VYQ 1051
Query: 732 IRAKPEYHKFLXXXXXXXXRKVRDSTGARIIFPAAEDKDQDLITIIGKEDAVREAQKELE 791
++ E+H+F+ +++ +T +I P D++ D+I I G ++ + +A+ ELE
Sbjct: 1050 VKIPREHHRFVLGKSGKKLQELELATSTKITIPRT-DENSDVIKISGTKEGIEKARHELE 874
Query: 792 ALIQNLENVVEDYMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKG 851
+ + + + V H Q +++ EE G ++ P + D++ + G
Sbjct: 873 CISEEQSKRAFERLPVQKAFHPFICGPFNQNVKQWIEETGA-SINVPPASVNKDEIVVSG 697
Query: 852 AKDCVEAAKKRIQEIIEDLEAQVTVECAIP-QKFHRSVMGPKGSRIQQITRDYNVQIKFP 910
K+ V + I I E+ + + + HR V+GP+G+ IQ+I + +V + P
Sbjct: 696 EKEGVAKCIQNIMRIYEEKKRKCQNGSLWK*ETQHRYVIGPRGNGIQEILQHCDVALDVP 517
Query: 911 DREENPVHSVEPSIQENGDEAGEGREAKETDPGSPRRCDIIIISGRXXXXXXXXXXXXXX 970
P+ S +I G E D P + ++ +
Sbjct: 516 -----PLDSPSETITLRG----------EQDKLGPA---LTMVYSKANSVS--------- 418
Query: 971 VPVTIEVEVPFDLHRYIIGQKGSGIRKMMDEFEVNIHVPAPELQSDTIAITGLAANLDRA 1030
T EV P LHR+IIG+KG+ IR++ +E +H+ E Q D I + G + A
Sbjct: 417 ---TSEVMAPSWLHRFIIGKKGANIRRITEEHP-KVHIEFTEGQ-DKITVEGSPEEVQEA 253
Query: 1031 KAGLLDRVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGA 1073
L V +L+ R + VDPK+H IIG+ GA
Sbjct: 252 ILALEVIVTDLKN-------RMDYAEIEVDPKFHKHIIGKNGA 145
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 169/389 (43%), Gaps = 2/389 (0%)
Frame = -3
Query: 615 IDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGR 674
I++ S T++I G+ + AR ++ L A +V IP + H ++G G+
Sbjct: 1170 IEISLARDQSMTVVINGRSDSVMKARREVVG---KLQTQAVYQVKIPREHHRFVLGKSGK 1000
Query: 675 LIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRA 734
++ +E I P SD + I G +EKA+ +L ++EE+ ++F +
Sbjct: 999 KLQE-LELATSTKITIPRTDENSDVIKISGTKEGIEKARHELECISEEQSKRAFE-RLPV 826
Query: 735 KPEYHKFLXXXXXXXXRKVRDSTGARIIFPAAEDKDQDLITIIGKEDAVREAQKELEALI 794
+ +H F+ ++ + TGA I P A ++D I + G+++ V + + + +
Sbjct: 825 QKAFHPFICGPFNQNVKQWIEETGASINVPPA-SVNKDEIVVSGEKEGVAKCIQNIMRIY 649
Query: 795 QNLENVVEDYMLVD-PKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAK 853
+ + ++ L HR+ + RG ++EI + + V + P + S+ +TL+G +
Sbjct: 648 EEKKRKCQNGSLWK*ETQHRYVIGPRGNGIQEILQ-HCDVALDVPPLDSPSETITLRGEQ 472
Query: 854 DCVEAAKKRIQEIIEDLEAQVTVECAIPQKFHRSVMGPKGSRIQQITRDY-NVQIKFPDR 912
D + A + + + T E P HR ++G KG+ I++IT ++ V I+F
Sbjct: 471 DKLGPA---LTMVYSKANSVSTSEVMAPSWLHRFIIGKKGANIRRITEEHPKVHIEF--- 310
Query: 913 EENPVHSVEPSIQENGDEAGEGREAKETDPGSPRRCDIIIISGRXXXXXXXXXXXXXXVP 972
EG++ K T GSP I++
Sbjct: 309 -------------------TEGQD-KITVEGSPEEVQEAILALEVIVTDLKNRMDYA--- 199
Query: 973 VTIEVEVPFDLHRYIIGQKGSGIRKMMDE 1001
E+EV H++IIG+ G+ +K+ +
Sbjct: 198 ---EIEVDPKFHKHIIGKNGANSKKLFSK 121
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 9/297 (3%)
Frame = -3
Query: 306 QHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQA---LTEVYAKAN 362
H++V+G G LQE+ T + IP +D S+ + + G E + +A L + + +
Sbjct: 1032 HHRFVLGKSGKKLQELELATSTKITIPRTDENSDVIKISGTKEGIEKARHELECISEEQS 853
Query: 363 SFTVSSVSAPSWLHRFIIGKKGQNLAKITQQ------MPKVHIEFTEGEDKITLEGPTED 416
+ H FI G QN+ + ++ +P + +D+I + G E
Sbjct: 852 KRAFERLPVQKAFHPFICGPFNQNVKQWIEETGASINVPPASV----NKDEIVVSGEKEG 685
Query: 417 VNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSE 476
V + I + ++ + + HR++IG G I I V++ +PP
Sbjct: 684 VAKCIQNIMRIYEEKKRKCQNGSLWK*ETQHRYVIGPRGNGIQEILQHCDVALDVPPLDS 505
Query: 477 KSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDK 536
S I + G+ + A L + S+ + T +++ HR IIG+KG IR I ++
Sbjct: 504 PSETITLRGEQDKLGPA---LTMVYSKANSVSTSEVMAPSWLHRFIIGKKGANIRRITEE 334
Query: 537 FPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFH 593
P+V I F + D + + G EV++ ++ +V DL + + +FH
Sbjct: 333 HPKVHIEF---TEGQDKITVEGSPEEVQEAILALEVIVTDLKNRMDYAEIEVDPKFH 172
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
Frame = -3
Query: 984 HRYIIGQKGSGIRKMMDEFEVNIHVPAPELQSDTIAITGLAANLDRAKAGLLDRVKELQA 1043
HRY+IG +G+GI++++ +V + VP + S+TI + G L A + +
Sbjct: 594 HRYVIGPRGNGIQEILQHCDVALDVPPLDSPSETITLRGEQDKLGPALTMVYSKA----- 430
Query: 1044 EQEDRALRSFKLSVTVDPKY-HPKIIGRKGAVITQIRLEH-EVNIQFPDKDDGNQPQDQI 1101
S S + P + H IIG+KGA I +I EH +V+I+F + QD+I
Sbjct: 429 -------NSVSTSEVMAPSWLHRFIIGKKGANIRRITEEHPKVHIEF------TEGQDKI 289
Query: 1102 TITGYEKNTEAARDAILKIVGELE-QMVSEDVPLDHRVHARIIGARGKAIRKIM 1154
T+ G + + A A+ IV +L+ +M ++ +D + H IIG G +K+
Sbjct: 288 TVEGSPEEVQEAILALEVIVTDLKNRMDYAEIEVDPKFHKHIIGKNGANSKKLF 127
>13185
Length = 1678
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/292 (53%), Positives = 210/292 (71%), Gaps = 6/292 (2%)
Frame = +3
Query: 983 LHRYIIGQKGSGIRKMMDEFEVNIHVPAPELQSDTIAITGLAANLDRAKAGLLDRVKELQ 1042
LH + +G +R+MM +F+VNI +P P SD + +TG N++RA+ L +RV +L
Sbjct: 465 LHHW---PEGRDVRRMMQDFDVNISIPPPSDNSDLVRVTGPPENVERARKALEERVGQLD 635
Query: 1043 AEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLEHEVNIQFPDKDDGNQPQDQIT 1102
AE+EDRAL+ F+L V VDP++HPKIIGRKGAVI++IR +H+VN+QFPD+++ NQ IT
Sbjct: 636 AEREDRALKGFQLQVEVDPRHHPKIIGRKGAVISKIRADHDVNVQFPDRNEENQ--GLIT 809
Query: 1103 ITGYEKNTEAARDAILKIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIR 1162
ITGYE+N + AR+ IL IV +LE MV+E+V +DHRVH RIIG +G+ +R+IMD+F VDIR
Sbjct: 810 ITGYEQNAQRAREEILGIVKDLEDMVTEEVQIDHRVHPRIIGGKGRTVRRIMDDFNVDIR 989
Query: 1163 FPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDSEALQVYMKPPAHEESRAP 1222
FP+S + DPN VT+TG + V + DH+LNL+EEYL DVVD E LQ +PP+ AP
Sbjct: 990 FPRSDSGDPNMVTITGPEDAVYDCKDHLLNLQEEYLQDVVDQEYLQDLQRPPSKTNDDAP 1169
Query: 1223 SK-----GFVVRDAPWTSNSSEKAPDMSSSEEFPSFGAQVAPKT-LPWGPKR 1268
+ GFVVR+APW + APD +S+EEFPSFG+ V PK+ WGP R
Sbjct: 1170 PRRGEPQGFVVRNAPWHA----AAPDTASTEEFPSFGSVVKPKSGHAWGPMR 1313
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 112/171 (65%), Gaps = 5/171 (2%)
Frame = +1
Query: 828 EEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTVECAIPQKFHRS 887
EEYGGV VSFPRSG +S++V +KG+KDCVE AKK+I +I+ DL+AQVTVEC I Q++HR+
Sbjct: 1 EEYGGVTVSFPRSGVKSERVVIKGSKDCVEGAKKKITDIVADLDAQVTVECVISQQYHRT 180
Query: 888 VMGPKGSRIQQITRDYNVQIKFPDREENPVHSVEPSIQE-----NGDEAGEGREAKETDP 942
VMG +GS +++ITR + V IKFPD+ P+ + E NGD + E + T
Sbjct: 181 VMGAQGSHVREITRTHEVGIKFPDK---PMPNGRQGEGEEEHVANGDVSSEEGSERGT-- 345
Query: 943 GSPRRCDIIIISGRXXXXXXXXXXXXXXVPVTIEVEVPFDLHRYIIGQKGS 993
R+ DIIII+G+ VP+T EV VPFD HR+IIGQKG
Sbjct: 346 ---RKSDIIIITGKPEKCEAAKKALLDLVPITEEVPVPFDYHRFIIGQKGG 489
Score = 92.8 bits (229), Expect(2) = 2e-27, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Frame = +3
Query: 526 KGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVA-------DLV 578
+G +R + F +V I+ P P+ SD+V++ GP VE+ K +++ V D
Sbjct: 480 EGRDVRRMMQDF-DVNISIPPPSDNSDLVRVTGPPENVERARKALEERVGQLDAEREDRA 656
Query: 579 ENSYSISVPIFKQFHXXXXXXXXXXXXXXREESNTKIDLPAENSNSETII-ITGKRANCE 637
+ + V + + H R + + + P N ++ +I ITG N +
Sbjct: 657 LKGFQLQVEVDPRHHPKIIGRKGAVISKIRADHDVNVQFPDRNEENQGLITITGYEQNAQ 836
Query: 638 AARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGS 697
AR IL I KDL ++ EV I ++H +IG KGR +R IM++ V I FP SG
Sbjct: 837 RAREEILGIVKDLEDMVTEEVQIDHRVHPRIIGGKGRTVRRIMDDF-NVDIRFPRSDSGD 1013
Query: 698 -DTVVIRGPSSDVEKAKKQLLHLAEE 722
+ V I GP V K LL+L EE
Sbjct: 1014PNMVTITGPEDAVYDCKDHLLNLQEE 1091
Score = 49.3 bits (116), Expect(2) = 2e-27, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 29/151 (19%)
Frame = +1
Query: 406 DKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQY 465
+++ ++G + V A+++I +V DL ++ VE I ++HR ++G G+++ I +
Sbjct: 52 ERVVIKGSKDCVEGAKKKITDIVADLDAQVT-VECVISQQYHRTVMGAQGSHVREITRTH 228
Query: 466 KVSVRIP----PD-------------------------SEKSNLIRIEGDPQGVQQAKRE 496
+V ++ P P+ + KS++I I G P+ + AK+
Sbjct: 229 EVGIKFPDKPMPNGRQGEGEEEHVANGDVSSEEGSERGTRKSDIIIITGKPEKCEAAKKA 408
Query: 497 LLELASRMENERTKDLIIEQRFHRTIIGQKG 527
LL+L T+++ + +HR IIGQKG
Sbjct: 409 LLDLVPI-----TEEVPVPFDYHRFIIGQKG 486
Score = 84.3 bits (207), Expect(2) = 1e-24, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 8/207 (3%)
Frame = +3
Query: 672 KGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKK-------QLLHLAEEKQ 724
+GR +R +M++ V+I P SD V + GP +VE+A+K QL E++
Sbjct: 480 EGRDVRRMMQDFD-VNISIPPPSDNSDLVRVTGPPENVERARKALEERVGQLDAEREDRA 656
Query: 725 TKSFTVDIRAKPEYHKFLXXXXXXXXRKVRDSTGARIIFPAAEDKDQDLITIIGKEDAVR 784
K F + + P +H + K+R + FP +++Q LITI G E +
Sbjct: 657 LKGFQLQVEVDPRHHPKIIGRKGAVISKIRADHDVNVQFPDRNEENQGLITITGYEQNAQ 836
Query: 785 EAQKELEALIQNLENVVEDYMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGT-Q 843
A++E+ ++++LE++V + + +D + H + +G+ +R I +++ V + FPRS +
Sbjct: 837 RAREEILGIVKDLEDMVTEEVQIDHRVHPRIIGGKGRTVRRIMDDF-NVDIRFPRSDSGD 1013
Query: 844 SDKVTLKGAKDCVEAAKKRIQEIIEDL 870
+ VT+ G +D V K + + E+
Sbjct: 1014PNMVTITGPEDAVYDCKDHLLNLQEEY 1094
Score = 48.5 bits (114), Expect(2) = 1e-24, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 29/168 (17%)
Frame = +1
Query: 535 DKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHX 594
+++ V ++FP KS+ V ++G K+ VE K + +VADL + ++ I +Q+H
Sbjct: 1 EEYGGVTVSFPRSGVKSERVVIKGSKDCVEGAKKKITDIVADL-DAQVTVECVISQQYHR 177
Query: 595 XXXXXXXX-----------------------XXXXXREESNTKIDLPAENSN------SE 625
EE D+ +E + S+
Sbjct: 178 TVMGAQGSHVREITRTHEVGIKFPDKPMPNGRQGEGEEEHVANGDVSSEEGSERGTRKSD 357
Query: 626 TIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKG 673
IIITGK CEAA+ +L DL I E EV +P H +IG KG
Sbjct: 358 IIIITGKPEKCEAAKKALL----DLVPITE-EVPVPFDYHRFIIGQKG 486
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Frame = +3
Query: 313 PKGNSLQEILERTGVSVEIPPSDSISETVILRGEP-----------EKLGQALTEVYAKA 361
P+G ++ +++ V++ IPP S+ V + G P E++GQ E +A
Sbjct: 477 PEGRDVRRMMQDFDVNISIPPPSDNSDLVRVTGPPENVERARKALEERVGQLDAEREDRA 656
Query: 362 NSFTVSSVSAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFT----EGEDKITLEGPTEDV 417
V H IIG+KG ++KI V+++F E + IT+ G ++
Sbjct: 657 LKGFQLQVEVDPRHHPKIIGRKGAVISKIRADH-DVNVQFPDRNEENQGLITITGYEQNA 833
Query: 418 NVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIP-PDSE 476
A+E+I G+VKDL + M E+ IDH+ H +IG G + RI D + V +R P DS
Sbjct: 834 QRAREEILGIVKDLED-MVTEEVQIDHRVHPRIIGGKGRTVRRIMDDFNVDIRFPRSDSG 1010
Query: 477 KSNLIRIEGDPQGVQQAKRELLEL 500
N++ I G V K LL L
Sbjct: 1011DPNMVTITGPEDAVYDCKDHLLNL 1082
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Frame = +3
Query: 751 RKVRDSTGARIIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLENVVEDYML---- 806
R++ I P D + DL+ + G + V A+K LE + L+ ED L
Sbjct: 495 RRMMQDFDVNISIPPPSD-NSDLVRVTGPPENVERARKALEERVGQLDAEREDRALKGFQ 671
Query: 807 ----VDPKHHRHFVIRRGQVLREIAEEYGGVMVSFP-RSGTQSDKVTLKGAKDCVEAAKK 861
VDP+HH + R+G V+ +I ++ V V FP R+ +T+ G + + A++
Sbjct: 672 LQVEVDPRHHPKIIGRKGAVISKIRADHD-VNVQFPDRNEENQGLITITGYEQNAQRARE 848
Query: 862 RIQEIIEDLEAQVTVECAIPQKFHRSVMGPKGSRIQQITRDYNVQIKFP 910
I I++DLE VT E I + H ++G KG +++I D+NV I+FP
Sbjct: 849 EILGIVKDLEDMVTEEVQIDHRVHPRIIGGKGRTVRRIMDDFNVDIRFP 995
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +3
Query: 975 IEVEVPFDLHRYIIGQKGSGIRKMMDEFEVNIHVP-APELQSDTIAITGLAANLDRAKAG 1033
++VEV H IIG+KG+ I K+ + +VN+ P E I ITG N RA+
Sbjct: 672 LQVEVDPRHHPKIIGRKGAVISKIRADHDVNVQFPDRNEENQGLITITGYEQNAQRAREE 851
Query: 1034 LLDRVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLEHEVNIQFPDKDD 1093
+L VK+L ED V +D + HP+IIG KG + +I + V+I+FP D
Sbjct: 852 ILGIVKDL----EDMVTE----EVQIDHRVHPRIIGGKGRTVRRIMDDFNVDIRFPRSDS 1007
Query: 1094 GNQPQDQITITGYEKNTEAARDAILKIVGELEQMV 1128
G+ + +TITG E +D +L + E Q V
Sbjct: 1008 GD--PNMVTITGPEDAVYDCKDHLLNLQEEYLQDV 1106
Score = 50.8 bits (120), Expect(2) = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Frame = +3
Query: 162 HRFVIGKNGEKL-QDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKAR----HEVLLIS 216
H + G++ ++ QD ++ I IP P D S+ +++TG E +E+AR V +
Sbjct: 468 HHWPEGRDVRRMMQDFDVN----ISIPPPSDNSDLVRVTGPPENVERARKALEERVGQLD 635
Query: 217 AEQDKRAVE----RLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPSV-NRTEIVFT 271
AE++ RA++ ++EV+ HP I G ++ +I + + P + N+ I T
Sbjct: 636 AEREDRALKGFQLQVEVDPRHHPKIIGRKGAVISKIRADHDVNVQFPDRNEENQGLITIT 815
Query: 272 GEKEQLAQAVARXXXXXXXXXXXXXXXXXXXXXSQHKYVIGPKGNSLQEILERTGVSVEI 331
G EQ AQ H +IG KG +++ I++ V +
Sbjct: 816 G-YEQNAQRAREEILGIVKDLEDMVTEEVQIDHRVHPRIIGGKGRTVRRIMDDFNVDIRF 992
Query: 332 PPSDSISETVILRGEPE 348
P SDS ++ PE
Sbjct: 993 PRSDSGDPNMVTITGPE 1043
Score = 30.8 bits (68), Expect(2) = 2e-09, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +1
Query: 127 IMVSGK---LDAVMKARKDIVARLQTQASATVPIPKEHHRFVIGKNG 170
I+++GK +A KA D+V + VP+P ++HRF+IG+ G
Sbjct: 361 IIITGKPEKCEAAKKALLDLVP-----ITEEVPVPFDYHRFIIGQKG 486
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 10/238 (4%)
Frame = +3
Query: 809 PKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIE 868
P HH G+ +R + +++ V +S P SD V + G + VE A+K ++E +
Sbjct: 462 PLHH----WPEGRDVRRMMQDFD-VNISIPPPSDNSDLVRVTGPPENVERARKALEERVG 626
Query: 869 DLEAQ--------VTVECAIPQKFHRSVMGPKGSRIQQITRDYNVQIKFPDR-EENPVHS 919
L+A+ ++ + + H ++G KG+ I +I D++V ++FPDR EEN
Sbjct: 627 QLDAEREDRALKGFQLQVEVDPRHHPKIIGRKGAVISKIRADHDVNVQFPDRNEENQGLI 806
Query: 920 VEPSIQENGDEAGEGREAKETDPGSPRRCDIIIISGRXXXXXXXXXXXXXXVPVTIEVEV 979
++N A R +I+ I VT EV++
Sbjct: 807 TITGYEQNAQRA---------------REEILGIVKDLEDM------------VTEEVQI 905
Query: 980 PFDLHRYIIGQKGSGIRKMMDEFEVNIHVPAPEL-QSDTIAITGLAANLDRAKAGLLD 1036
+H IIG KG +R++MD+F V+I P + + + ITG + K LL+
Sbjct: 906 DHRVHPRIIGGKGRTVRRIMDDFNVDIRFPRSDSGDPNMVTITGPEDAVYDCKDHLLN 1079
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 26/170 (15%)
Frame = +1
Query: 1004 VNIHVPAPELQSDTIAITGLAANLDRAKAGLLDRVKELQAEQEDRALRSFKLSVTVDPKY 1063
V + P ++S+ + I G ++ AK + D V +L A+ + + +Y
Sbjct: 16 VTVSFPRSGVKSERVVIKGSKDCVEGAKKKITDIVADLDAQ--------VTVECVISQQY 171
Query: 1064 HPKIIGRKGAVITQIRLEHEVNIQFPDK--------------------------DDGNQP 1097
H ++G +G+ + +I HEV I+FPDK + G +
Sbjct: 172 HRTVMGAQGSHVREITRTHEVGIKFPDKPMPNGRQGEGEEEHVANGDVSSEEGSERGTRK 351
Query: 1098 QDQITITGYEKNTEAARDAILKIVGELEQMVSEDVPLDHRVHARIIGARG 1147
D I ITG + EAA+ A+L +V ++E+VP+ H IIG +G
Sbjct: 352 SDIIIITGKPEKCEAAKKALLDLV-----PITEEVPVPFDYHRFIIGQKG 486
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%)
Frame = +1
Query: 467 VSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQK 526
V+V P KS + I+G V+ AK+++ ++ + ++ + T + +I Q++HRT++G +
Sbjct: 16 VTVSFPRSGVKSERVVIKGSKDCVEGAKKKITDIVADLDAQVTVECVISQQYHRTVMGAQ 195
Query: 527 GERIREIRDKFPEVIINFPD 546
G +REI + EV I FPD
Sbjct: 196 GSHVREI-TRTHEVGIKFPD 252
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Frame = +3
Query: 92 MNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARL-QTQ 150
++ + EG + +MQ ++ + D + V+G + V +ARK + R+ Q
Sbjct: 465 LHHWPEGRDVR---RMMQDFDVNISIPPPSDNSDLVRVTGPPENVERARKALEERVGQLD 635
Query: 151 A----------SATVPIPKEHHRFVIGKNGEKLQDLELKTATKIQIP-RPDDPSNQIKIT 199
A V + HH +IG+ G + + +Q P R ++ I IT
Sbjct: 636 AEREDRALKGFQLQVEVDPRHHPKIIGRKGAVISKIRADHDVNVQFPDRNEENQGLITIT 815
Query: 200 GTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIP 259
G ++ ++AR E+L I + + E ++++ HP I G R V IM + I P
Sbjct: 816 GYEQNAQRAREEILGIVKDLEDMVTEEVQIDHRVHPRIIGGKGRTVRRIMDDFNVDIRFP 995
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Frame = +1
Query: 758 GARIIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLENVVEDYMLVDPKHHRHFVI 817
G + FP + K + ++ I G +D V A+K++ ++ +L+ V ++ ++HR +
Sbjct: 13 GVTVSFPRSGVKSERVV-IKGSKDCVEGAKKKITDIVADLDAQVTVECVISQQYHRTVMG 189
Query: 818 RRGQVLREIAEEYGGVMVSFP-----------------------------RSGTQSDKVT 848
+G +REI + V + FP R +SD +
Sbjct: 190 AQGSHVREITRTH-EVGIKFPDKPMPNGRQGEGEEEHVANGDVSSEEGSERGTRKSDIII 366
Query: 849 LKGAKDCVEAAKKRIQEIIEDLEAQVTVECAIPQKFHRSVMGPKGS 894
+ G + EAAKK + +++ +T E +P +HR ++G KG
Sbjct: 367 ITGKPEKCEAAKKALLDLV-----PITEEVPVPFDYHRFIIGQKGG 489
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 681 EECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHK 740
EE GGV + FP G S+ VVI+G VE AKK++ + + + TV+ +YH+
Sbjct: 1 EEYGGVTVSFPRSGVKSERVVIKGSKDCVEGAKKKITDIVADLDAQ-VTVECVISQQYHR 177
Query: 741 FLXXXXXXXXRKVRDSTGARIIFP 764
+ R++ + I FP
Sbjct: 178 TVMGAQGSHVREITRTHEVGIKFP 249
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 127 IMVSGKLDAVMKARK---DIVARLQTQASATVPIPKEHHRFVIGKNGEKLQDLELKTATK 183
+++ G D V A+K DIVA L Q + I +++HR V+G G ++ E+ +
Sbjct: 58 VVIKGSKDCVEGAKKKITDIVADLDAQVTVECVISQQYHRTVMGAQGSHVR--EITRTHE 231
Query: 184 IQIPRPDDP 192
+ I PD P
Sbjct: 232 VGIKFPDKP 258
>31560
Length = 597
Score = 146 bits (369), Expect(2) = 3e-56, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 100/134 (74%)
Frame = -3
Query: 490 VQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQ 549
VQ+AK++LLE++ RMENE+++D+II+QRFH TIIG +GE IREIR++F +V I FPD +
Sbjct: 403 VQKAKQQLLEMSQRMENEKSRDIIIDQRFHGTIIGARGENIREIRERFNQVQITFPDQGK 224
Query: 550 KSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHXXXXXXXXXXXXXXRE 609
KSDIV LRGPK +V+KC K++Q + +++E++Y V IFK FH R+
Sbjct: 223 KSDIVTLRGPKQDVDKCFKHLQVLHKEMLESNYQDKVKIFKDFHXNIIGKGGANIKKIRD 44
Query: 610 ESNTKIDLPAENSN 623
E+NT+IDLP E+++
Sbjct: 43 ETNTRIDLPGEHAD 2
Score = 92.4 bits (228), Expect(2) = 3e-56, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -1
Query: 427 MVKDLI-NRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEG 485
+V DL+ NRMDY EI +D KFH+H+IGK+GANI RIKD VSVRIP D+E SN+IRIEG
Sbjct: 594 IVTDLLSNRMDYAEIEVDPKFHKHIIGKNGANITRIKDDNGVSVRIPSDTENSNVIRIEG 415
Query: 486 DPQGVQQ 492
DP G ++
Sbjct: 414 DPAGCRR 394
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%)
Frame = -3
Query: 637 EAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSG 696
+ A+ ++L + + + N ++ I + H ++IG +G IR I E V I FP +G
Sbjct: 400 QKAKQQLLEMSQRMENEKSRDIIIDQRFHGTIIGARGENIREIRERFNQVQITFPDQGKK 221
Query: 697 SDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLXXXXXXXXRKVRDS 756
SD V +RGP DV+K K L L +E ++ ++ ++H + +K+RD
Sbjct: 220 SDIVTLRGPKQDVDKCFKHLQVLHKEMLESNYQDKVKIFKDFHXNIIGKGGANIKKIRDE 41
Query: 757 TGARIIFPA 765
T RI P
Sbjct: 40 TNTRIDLPG 14
Score = 54.7 bits (130), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = -3
Query: 1110 TEAARDAILKIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEF-KVDIRFPQSGA 1168
+ A+ +L++ +E S D+ +D R H IIGARG+ IR+I + F +V I FP G
Sbjct: 403 VQKAKQQLLEMSQRMENEKSRDIIIDQRFHGTIIGARGENIREIRERFNQVQITFPDQGK 224
Query: 1169 PDPNCVTVTGLPENVEEAIDHILNLEEEYL 1198
+ VT+ G ++V++ H+ L +E L
Sbjct: 223 K-SDIVTLRGPKQDVDKCFKHLQVLHKEML 137
Score = 37.4 bits (85), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = -1
Query: 1057 VTVDPKYHPKIIGRKGAVITQIRLEHEVNIQFP 1089
+ VDPK+H IIG+ GA IT+I+ ++ V+++ P
Sbjct: 552 IEVDPKFHKHIIGKNGANITRIKDDNGVSVRIP 454
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Frame = -3
Query: 783 VREAQKELEALIQNLENVVEDYMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGT 842
V++A+++L + Q +EN +++D + H + RG+ +REI E + V ++FP G
Sbjct: 403 VQKAKQQLLEMSQRMENEKSRDIIIDQRFHGTIIGARGENIREIRERFNQVQITFPDQGK 224
Query: 843 QSDKVTLKGAKDCVEAAKKRIQEI-IEDLEAQVTVECAIPQKFHRSVMGPKGSRIQQITR 901
+SD VTL+G K V+ K +Q + E LE+ + I + FH +++G G+ I++I
Sbjct: 223 KSDIVTLRGPKQDVDKCFKHLQVLHKEMLESNYQDKVKIFKDFHXNIIGKGGANIKKIRD 44
Query: 902 DYNVQIKFP 910
+ N +I P
Sbjct: 43 ETNTRIDLP 17
Score = 45.8 bits (107), Expect(2) = 1e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = -3
Query: 1032 AGLLDRVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLE-HEVNIQFPD 1090
+G + + K+ E R + +D ++H IIG +G I +IR ++V I FPD
Sbjct: 412 SGWVQKAKQQLLEMSQRMENEKSRDIIIDQRFHGTIIGARGENIREIRERFNQVQITFPD 233
Query: 1091 KDDGNQPQDQITITGYEKNTEAARDAILKIVGE-LEQMVSEDVPLDHRVHARIIGARGKA 1149
+ + D +T+ G +++ + + + E LE + V + H IIG G
Sbjct: 232 Q---GKKSDIVTLRGPKQDVDKCFKHLQVLHKEMLESNYQDKVKIFKDFHXNIIGKGGAN 62
Query: 1150 IRKIMDEFKVDIRFP 1164
I+KI DE I P
Sbjct: 61 IKKIRDETNTRIDLP 17
Score = 36.2 bits (82), Expect(2) = 1e-09, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = -1
Query: 976 EVEVPFDLHRYIIGQKGSGIRKMMDEFEVNIHVPAPELQSDTIAITGLAANLDR 1029
E+EV H++IIG+ G+ I ++ D+ V++ +P+ S+ I I G A R
Sbjct: 555 EIEVDPKFHKHIIGKNGANITRIKDDNGVSVRIPSDTENSNVIRIEGDPAGCRR 394
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Frame = -3
Query: 345 GEPEKLGQALTEVYAKANSFTVSSVSAPSWLHRFIIGKKGQNLAKITQQMPKVHIEF--- 401
G +K Q L E+ + + + H IIG +G+N+ +I ++ +V I F
Sbjct: 409 GWVQKAKQQLLEMSQRMENEKSRDIIIDQRFHGTIIGARGENIREIRERFNQVQITFPDQ 230
Query: 402 TEGEDKITLEGPTEDVNVAQEQIEGMVKDLI--NRMDYVEINIDHKFHRHLIGKSGANIN 459
+ D +TL GP +DV+ + ++ + K+++ N D V+I D FH ++IGK GANI
Sbjct: 229 GKKSDIVTLRGPKQDVDKCFKHLQVLHKEMLESNYQDKVKIFKD--FHXNIIGKGGANIK 56
Query: 460 RIKDQYKVSVRIP 472
+I+D+ + +P
Sbjct: 55 KIRDETNTRIDLP 17
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Frame = -3
Query: 439 EINIDHKFHRHLIGKSGANINRIKDQY-KVSVRIPPDSEKSNLIRIEGDPQGVQQAKREL 497
+I ID +FH +IG G NI I++++ +V + P +KS+++ + G Q V + + L
Sbjct: 340 DIIIDQRFHGTIIGARGENIREIRERFNQVQITFPDQGKKSDIVTLRGPKQDVDKCFKHL 161
Query: 498 LELASRMENERTKDLI-IEQRFHRTIIGQKGERIREIRD 535
L M +D + I + FH IIG+ G I++IRD
Sbjct: 160 QVLHKEMLESNYQDKVKIFKDFHXNIIGKGGANIKKIRD 44
Score = 43.9 bits (102), Expect(2) = 6e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 7/162 (4%)
Frame = -3
Query: 856 VEAAKKRIQEIIEDLEAQVTVECAIPQKFHRSVMGPKGSRIQQITRDYN-VQIKFPDREE 914
V+ AK+++ E+ + +E + + + I Q+FH +++G +G I++I +N VQI FPD+
Sbjct: 403 VQKAKQQLLEMSQRMENEKSRDIIIDQRFHGTIIGARGENIREIRERFNQVQITFPDQ-- 230
Query: 915 NPVHSVEPSIQENGDEAGEGREAKETDPGSPRRCDIIIISGRXXXXXXXXXXXXXXVPVT 974
++ DI+ + G
Sbjct: 229 ------------------------------GKKSDIVTLRGPKQDVDKCFKHLQVLHKEM 140
Query: 975 IE------VEVPFDLHRYIIGQKGSGIRKMMDEFEVNIHVPA 1010
+E V++ D H IIG+ G+ I+K+ DE I +P
Sbjct: 139 LESNYQDKVKIFKDFHXNIIGKGGANIKKIRDETNTRIDLPG 14
Score = 29.3 bits (64), Expect(2) = 6e-07, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 807 VDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKG 851
VDPK H+H + + G + I ++ GV V P S+ + ++G
Sbjct: 546 VDPKFHKHIIGKNGANITRIKDD-NGVSVRIPSDTENSNVIRIEG 415
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Frame = -3
Query: 136 VMKARKDIV---ARLQTQASATVPIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDD- 191
V KA++ ++ R++ + S + I + H +IG GE ++++ + ++QI PD
Sbjct: 403 VQKAKQQLLEMSQRMENEKSRDIIIDQRFHGTIIGARGENIREIR-ERFNQVQITFPDQG 227
Query: 192 -PSNQIKITGTKEGIEKA------RHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRL 244
S+ + + G K+ ++K H+ +L S QDK +++ K FH I G
Sbjct: 226 KKSDIVTLRGPKQDVDKCFKHLQVLHKEMLESNYQDK-----VKIFKDFHXNIIGKGGAN 62
Query: 245 VGEIMQETGTRINIP 259
+ +I ET TRI++P
Sbjct: 61 IKKIRDETNTRIDLP 17
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -1
Query: 307 HKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQALTEVYAKANSFTV 366
HK++IG G ++ I + GVSV IP S + + G+P + + N +
Sbjct: 531 HKHIIGKNGANITRIKDDNGVSVRIPSDTENSNVIRIEGDPAGCRRPSNNCWKCHNGWKT 352
Query: 367 SSVS 370
S++
Sbjct: 351 RSLA 340
Score = 33.1 bits (74), Expect = 0.66, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = -1
Query: 500 LASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRG- 558
L++RM+ ++ ++ +FH+ IIG+ G I I+D V + P + S+++++ G
Sbjct: 579 LSNRMD---YAEIEVDPKFHKHIIGKNGANITRIKDD-NGVSVRIPSDTENSNVIRIEGD 412
Query: 559 ------PKNEVEKC 566
P N KC
Sbjct: 411 PAGCRRPSNNCWKC 370
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = -1
Query: 153 ATVPIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEK 207
A + + + H+ +IGKNG + ++ ++IP + SN I+I G G +
Sbjct: 558 AEIEVDPKFHKHIIGKNGANITRIKDDNGVSVRIPSDTENSNVIRIEGDPAGCRR 394
>13631
Length = 855
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 62/77 (80%), Gaps = 3/77 (3%)
Frame = +3
Query: 78 QVFHVPLEERKYKDMNQ--FG-EGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLD 134
QVF VP+ ER++K++N+ FG E +QAKIC +IM + G +E+SLA+DQ ++++++G+ D
Sbjct: 501 QVFTVPMVERRFKEVNEHRFGDESDQAKICKDIMAKYGVAIEISLARDQSMTVVINGRSD 680
Query: 135 AVMKARKDIVARLQTQA 151
+VMKAR+++V +LQTQ
Sbjct: 681 SVMKARREVVGKLQTQV 731
>09451
Length = 1994
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = -2
Query: 1055 LSVTVDPKYHPKIIGRKGAVITQIRLEHEVNIQFPDKDDGNQPQDQITITGYEKNTEAAR 1114
++V+ + KIIGR G+ I ++ I+ +DDGN + ++ +TG E +AAR
Sbjct: 1885 FDMSVEAHHCGKIIGRGGSKIRDLQTGSGCRIKVSREDDGNGKR-RVELTGSEDQIDAAR 1709
Query: 1115 DAILKIVGE 1123
D I ++ E
Sbjct: 1708 DMINSLLAE 1682
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = -2
Query: 510 KDLI-IEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDI-VQLRGPKNEVEKCT 567
KD+I I F IIG+ G RIRE+++ I DP + V+L G + +
Sbjct: 1570 KDMIEINSDFVGRIIGKGGSRIRELQEDTGCRINVSRDPGRDGQTEVELIGSHSAISN-- 1397
Query: 568 KYMQKMVADLVENSYSISVPIFK 590
++ +AD+V+ SY +F+
Sbjct: 1396 --AKRAIADIVDQSY*SPFHVFR 1334
>03467
Length = 2192
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 36/152 (23%)
Frame = -2
Query: 165 VIGKNGEKLQDLELKTATKIQIPRPDDP--SNQIKITGTKEGIEKAR---HEVLLISAEQ 219
+IG+ G K+++L++++ +I++ R D+P + ++ ++G+ + I KA+ H+VL E+
Sbjct: 2020 IIGRGGNKIRELQIESRCQIKVNRDDEPDGTRRVDLSGSDDAIAKAKDMIHQVL----EE 1853
Query: 220 DKRA---------------------------VERLE--VEKAFHPFIAGPYNRLVGEIMQ 250
D R ERL V+ F I G + EI
Sbjct: 1852 DDRGPRQQSYQQRSYGGGGMGGGYSGGGGGGNERLTMAVDSTFVGRIIGRGGSRIREIQD 1673
Query: 251 ETGTRINIPPPSVN--RTEIVFTGEKEQLAQA 280
TG R+N+ + +TE+ G ++ A
Sbjct: 1672 STGCRVNVSRDGDDNGQTEVELRGTLSEVQHA 1577
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = -2
Query: 506 NERTKDLIIEQRFHRTIIGQKGERIREIRDKFP---EVIINFPDPAQKSDIVQLRGPKNE 562
NER + ++ F IIG+ G RIREI+D V + D Q V+LRG +E
Sbjct: 1759 NERLT-MAVDSTFVGRIIGRGGSRIREIQDSTGCRVNVSRDGDDNGQTE--VELRGTLSE 1589
Query: 563 VEKCTKYMQKMVADLV 578
V+ + ++M+ D+V
Sbjct: 1588 VQ----HAKQMIDDIV 1553
>09541
Length = 2010
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 37/61 (60%)
Frame = -1
Query: 155 VPIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLL 214
+P+P++ VIGK GE ++ ++ ++ K+Q +PDD ++ ++ G +K ++ + +
Sbjct: 234 IPVPRQAVGLVIGKGGEMIKKIQNESGAKVQF-KPDDGQSEDRLCGVTGSPDKVQNAISM 58
Query: 215 I 215
I
Sbjct: 57 I 55
>30669
Length = 403
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -1
Query: 305 SQHKYVIGPKGNSLQEILERTG 326
+QH+YVIGP+GN +QEI+ G
Sbjct: 388 TQHRYVIGPRGNGIQEIITLMG 323
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 376 HRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRM 435
HR++IG +G + +I ITL G E V +A++++E VKD++ M
Sbjct: 382 HRYVIGPRGNGIQEI-----------------ITLMGKEEGVKMAKQELEKAVKDVLVCM 254
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 23/27 (85%)
Frame = -1
Query: 771 QDLITIIGKEDAVREAQKELEALIQNL 797
Q++IT++GKE+ V+ A++ELE ++++
Sbjct: 346 QEIITLMGKEEGVKMAKQELEKAVKDV 266
>26269
Length = 679
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Frame = -3
Query: 986 YIIGQKGSGIRKMMDEFEVNIHV----PAPELQSDTIAITGLAANLDRAKAGLLDRVKEL 1041
IIG+ G IR++ + V + + AP + I+G A RAK + V EL
Sbjct: 629 LIIGKGGETIRQLQERAGVKMVMIQDSNAPSAADKPLRISGDAPKCQRAK----EMVIEL 462
Query: 1042 QAEQEDRALRSFK------------LSVTVDPKYHPKIIGRKGAVITQIRLEHEVNIQFP 1089
E+ D F + + V + +IG+ G +I +I+ E V +QF
Sbjct: 461 LQEKADVPAPGFNNFDNMGPGGPGGIEIPVPRQAVGLVIGKGGEMIKKIQAEMMVKVQF- 285
Query: 1090 DKDDGNQPQDQITITGYEKNTEAA 1113
DDG + +TG+ + + A
Sbjct: 284 KPDDGQADERICLVTGHPEKVQNA 213
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = -3
Query: 155 VPIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLL 214
+P+P++ VIGK GE ++ ++ + K+Q +PDD +I EK ++ V +
Sbjct: 380 IPVPRQAVGLVIGKGGEMIKKIQAEMMVKVQF-KPDDGQADERICLVTGHPEKVQNAVGM 204
Query: 215 I 215
I
Sbjct: 203 I 201
>04763
Length = 1073
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = -3
Query: 155 VPIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQ--IKITGTKEGIEKARHEV 212
V IPK+ +IGK G ++ ++ ++ +I I SN+ I I G++E I+ A++ +
Sbjct: 771 VTIPKDMAGAIIGKGGARITEIRRRSGAQIVIDEALPGSNERIISIIGSQEQIQNAQY-M 595
Query: 213 LLISAEQ 219
L +S +Q
Sbjct: 594 LQLSVKQ 574
>18876
Length = 587
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +2
Query: 155 VPIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLL 214
+P+P++ VIGK GE Q ++ + K+Q +PDD +I EK ++ V +
Sbjct: 365 IPVPRQAVGLVIGKGGEHDQKIQAEMMVKVQF-KPDDGQADERICLVTGHPEKVQNAVGM 541
Query: 215 I 215
I
Sbjct: 542 I 544
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|93587673|ref|NP_001035277.1| DEAD box polypeptide 17
isoform 4 [Mus musculus]
(650 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04883 462 e-130
09327 376 e-104
00621 289 2e-78
01517 216 3e-56
30136 213 2e-55
01062 189 4e-48
09316 166 2e-41
02054 99 7e-35
19172 144 1e-34
00162 117 1e-31
07310 126 3e-29
00739 124 1e-28
12121 123 3e-28
33025 111 1e-24
22006 110 2e-24
34134 96 4e-23
17544 95 8e-20
14337 91 1e-18
08036 60 3e-18
34295 87 3e-17
19525 85 8e-17
17708 84 2e-16
19640 79 7e-15
02498 77 2e-14
11160 70 2e-14
00617 77 3e-14
12995 75 6e-14
11624 71 1e-12
39583 69 7e-12
10649 62 5e-10
03381 60 3e-09
31899 57 3e-08
31220 54 3e-07
19151 52 6e-07
33083 48 2e-05
11423 43 4e-04
06438 43 4e-04
01821 39 0.007
27757 31 1.7
>04883
Length = 1155
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 210/306 (68%), Positives = 252/306 (82%)
Frame = +3
Query: 34 PGERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFA 93
PG LRK KWD+S+L F+KNFY E P A P E+DE R+ +I+V G P P+
Sbjct: 189 PGGNLRKPKWDMSKLTPFQKNFYKESPTTASRNPMELDEYRQSHQISV-SGKFVPNPILT 365
Query: 94 FHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVH 153
F NFP YVM+ + +T PTPIQ Q +P+A++G+D+VGIAQTGSGKTLA++LPAIVH
Sbjct: 366 FTEVNFPDYVMNQVRRNSWTAPTPIQSQSWPVAMAGKDLVGIAQTGSGKTLAFMLPAIVH 545
Query: 154 INHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLE 213
INHQ YLERGDGPI L L PTRELAQQVQ+VA ++G SR++S C+YGGAP+GPQ+RDLE
Sbjct: 546 INHQAYLERGDGPIVLALVPTRELAQQVQEVAQEFGHASRVRSVCVYGGAPRGPQLRDLE 725
Query: 214 RGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQT 273
RG EICIATPGRLIDFLES +TNLRRCTYLVLDEADRMLDMGFEPQIRKI++QIRPDRQT
Sbjct: 726 RGAEICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 905
Query: 274 LMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEE 333
LMWSATWPKEVR+LAEDF+ +Y Q+N+G LEL+ANHNILQI+DVCME EK+ KL++L+ E
Sbjct: 906 LMWSATWPKEVRKLAEDFIDEYVQVNIGALELTANHNILQIIDVCMEHEKEDKLVKLLNE 1085
Query: 334 IMAEKE 339
IM K+
Sbjct: 1086IMTRKK 1103
>09327
Length = 1087
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 171/234 (73%), Positives = 204/234 (87%)
Frame = +2
Query: 170 VLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 229
+L PTRELAQQVQ+VA ++G SR++S C+YGGA +GPQ+R+L+RG EICIATPGRLIDF
Sbjct: 20 LLVPTRELAQQVQEVAVEFGHSSRVRSVCVYGGAQRGPQLRELDRGAEICIATPGRLIDF 199
Query: 230 LESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAE 289
LES +TNLRRCTYLVLDEADRMLDMGFEPQIRKIV+QIRPDRQTLMWSATWPKEVR+LAE
Sbjct: 200 LESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRKLAE 379
Query: 290 DFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETK 349
DF+ +YTQIN+G L+L+ANHNILQI+DVCM+ EK+ KL++L+ EIM EKEN+T+IFVETK
Sbjct: 380 DFIMEYTQINIGALQLTANHNILQIIDVCMDHEKEEKLVKLLNEIMQEKENRTLIFVETK 559
Query: 350 XXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 403
GWP +CIHGDKSQ ERDWVLN+FR+G+ P+L+ATDVASRGL
Sbjct: 560 RKCDDIHRRMKRDGWPVLCIHGDKSQQERDWVLNDFRNGRCPVLLATDVASRGL 721
>00621
Length = 2263
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 252/445 (56%), Gaps = 29/445 (6%)
Frame = +1
Query: 29 KKFGNPGERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCP 88
K+ N ++ K+KWD ++++ + E + + R I+ +GG + P
Sbjct: 94 KRLKNMAKKEAKQKWD-------DRHWTDKAKEEMAERDWRI--FREDYNISCKGGRI-P 243
Query: 89 KPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLL 148
P+ + ++ +M+V+ + EPTPIQ Q P+ L RD++G+A+TGSGKT A+L+
Sbjct: 244 NPIRFWKESDLGADIMEVIDRVGYKEPTPIQMQAIPIGLQNRDIIGVAETGSGKTAAFLI 423
Query: 149 PAIVHINHQPYLERGD----GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAP 204
P +V I P +ER + GP ++LAPTRELAQQ+++ +G+ ++ + GG
Sbjct: 424 PLLVWIQSLPKIERLEDADQGPYAVILAPTRELAQQIEEETRKFGEGLGIRVVSVIGGIS 603
Query: 205 KGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIV 264
+ Q L++G E+ IATPGR+ID LE+ L +CTY+V+DEADRM++MGFEP++RKI+
Sbjct: 604 REEQGFKLQQGCEVVIATPGRMIDVLENRYLVLNQCTYVVMDEADRMINMGFEPEVRKIL 783
Query: 265 DQI-----RPD--------------------RQTLMWSATWPKEVRQLAEDFLRDYTQIN 299
D + +PD RQT+M++AT P +V +LA FLR T +
Sbjct: 784 DYLPVSNQKPDNDDAEDDLKMLQNFKSKHKYRQTVMFTATMPPQVERLARTFLRRPTVVY 963
Query: 300 VGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKXXXXXXXXXX 359
+GN+ + QIV + ESEK KLI+++ A + IIFV K
Sbjct: 964 IGNVGKPVER-VEQIVYMLTESEKRKKLIEVLN---AGVDPPIIIFVNQKKGADVLAKSL 1131
Query: 360 XXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNS 419
G+ A +HG K Q +R++ L + G I++ATDVA RG+D++DV V+NYD +
Sbjct: 1132EKMGFNATTLHGGKGQEQREYALASLKGGAKDIMVATDVAGRGIDIKDVSLVLNYDMART 1311
Query: 420 SEDYVHRIGRTARSTNKGTAYTFFT 444
EDY HRIGRT R+ +GT+ TF T
Sbjct: 1312IEDYTHRIGRTGRAGKEGTSITFLT 1386
>01517
Length = 2605
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 155/243 (63%), Gaps = 4/243 (1%)
Frame = +2
Query: 227 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIV--DQIRP--DRQTLMWSATWPK 282
+D +E GK + C YLVLDEADRMLDMGFEPQIR+IV D + P RQTLM+SAT+PK
Sbjct: 2 VDMMERGKIGMDHCNYLVLDEADRMLDMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPK 181
Query: 283 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKT 342
E++ LA DFL +Y + VG + S + NI Q V E EK L+ L+ E+ T
Sbjct: 182 EIQLLARDFLDNYIFLAVGRVG-STSENITQKVVWVEEPEKRSFLLDLLMASGTGPESLT 358
Query: 343 IIFVETKXXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRG 402
++FVETK +PA IHGD+SQ ER+ L F++G PIL+AT VA+RG
Sbjct: 359 LVFVETKKGADSLEQFLMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVAARG 538
Query: 403 LDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEAN 462
LD+ +V+ VIN+D P+ E+YVHRIGRT R N G A +FF N AR+++ +L EAN
Sbjct: 539 LDIPNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNIARDMLDLLTEAN 718
Query: 463 QAI 465
Q +
Sbjct: 719 QEV 727
>30136
Length = 524
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 130/175 (74%)
Frame = +2
Query: 48 LPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVL 107
L F++NFY EHP VA TPYEV R + EITVRG P+ F A P YV+ +
Sbjct: 5 LTPFKRNFYQEHPTVANRTPYEVQRYRDEHEITVRGQ--AANPIQDFAEAYLPDYVIKEI 178
Query: 108 MDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPI 167
Q + PTPIQ QG+P+A+SG + VGIA+TGSGKTL Y+LPAIVHIN+Q L+RG+GPI
Sbjct: 179 RRQGYKSPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGEGPI 358
Query: 168 CLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIAT 222
LVLAPTRELAQQ+QQVA ++G S +++TC++GGAPKG Q+RDL+RG EI IAT
Sbjct: 359 ALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 523
>01062
Length = 2138
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 174/343 (50%)
Frame = -3
Query: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 171
F +P+ IQ + + GRD++ AQ+G+GKT + + + ++ Q + L+L
Sbjct: 2019 FEKPSAIQQRAVKPIVKGRDVIAQAQSGTGKTATFSISVLQCLDIQLRETQA-----LIL 1855
Query: 172 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 231
+PTRELA Q+Q+V G ++ GG G IR L+ G I TPGR+ D ++
Sbjct: 1854 SPTRELATQIQKVMLALGDYMNVQCHSCIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIK 1675
Query: 232 SGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDF 291
R ++LDEAD ML+ GF+ QI + + P Q ++ SAT P E+ ++ F
Sbjct: 1674 RRNLRTRSIKMMILDEADEMLNKGFKEQIYDVYRYLPPATQVILISATLPHEILEMTNKF 1495
Query: 292 LRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKXX 351
+ D +I V EL+ V V E K L L + + + +IF TK
Sbjct: 1494 MTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI---TQAVIFCNTKRK 1324
Query: 352 XXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFV 411
+ +HGD Q ER+ ++ FR+G + +LI TDV +RG+DV+ V V
Sbjct: 1323 VDWLTEKMREANFTVSSMHGDMPQKEREAIMKVFRAGDSRVLITTDVWARGIDVQQVSLV 1144
Query: 412 INYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 454
INYD PN+ E Y+HRIGR+ R KG A F +++ R++
Sbjct: 1143 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDI 1015
>09316
Length = 2312
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 194/391 (49%), Gaps = 17/391 (4%)
Frame = +2
Query: 74 RRKKEITVRGG--------DVCPKPVFAFHHANFPQYVMD-----VLMDQHFTEPTPIQC 120
RR+ E V G DV V + H + F +++ ++D F P+ +Q
Sbjct: 755 RRRNETAVDGAGGEGQAKKDVKGTYV-SIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQH 931
Query: 121 QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPI-CLVLAPTRELAQ 179
+ P A+ D++ A++G GKT ++L + LE DG + LV+A TRELA
Sbjct: 932 ECIPQAILSMDVLCQAKSGMGKTAVFVLATL------QQLEPVDGQVSVLVMAHTRELAF 1093
Query: 180 QVQQVADDYGK-CSRLKSTCIYGGAPKGPQIRDLERGV-EICIATPGRLIDFLESGKTNL 237
Q+ + + + K + +K +GG L + I + TPGRL ++ NL
Sbjct: 1094 QISKEYERFSKYMNNVKIAVFFGGMSVKKDEEVLSKNCPHIVVGTPGRLHALAKANNLNL 1273
Query: 238 RRCTYLVLDEADRML-DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYT 296
++ + +LDE D+ML D+ +++I ++Q +M+SAT KE+R + + F++D
Sbjct: 1274 KKIKHFILDECDKMLADLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPICKKFMQDPM 1453
Query: 297 QINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKXXXXXXX 356
++ V + H + Q ++EK+ KL +L++ + + N+ IIFV++
Sbjct: 1454 EVYVDDDSKLTLHGLQQHYCKLKDNEKNRKLFELLDVL---EFNQVIIFVKSVPRCMALS 1624
Query: 357 XXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDY 416
+PA+ IH +Q ER +F+ + IL+AT++ RG+D+E V V NYD
Sbjct: 1625 QLLLEQNFPAIAIHRQMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 1804
Query: 417 PNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 447
P S+ Y+HR+ R R KG A TF + N
Sbjct: 1805 PEDSDTYLHRVARAGRFGTKGLAITFVSDEN 1897
>02054
Length = 1110
Score = 99.4 bits (246), Expect(2) = 7e-35, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Frame = -3
Query: 280 WPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESE-------KDHKLIQLME 332
WPK L LRD ++ V N Q VD +S KD L+ ++
Sbjct: 793 WPK----LQRASLRDPVKVEVSNK--------YQTVDTLQQSYLFIPAKYKDAYLVSILN 650
Query: 333 EIMAEKENKTIIFVETKXXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPI 392
E+ N ++F T G+ A+ +HG SQ +R LN+F+S I
Sbjct: 649 ELAG---NSFMVFCSTCANTQRVALLLRNLGFTAIPLHGQMSQAKRLGSLNKFKSKDRSI 479
Query: 393 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 444
LIATDVASRGLD+ V V+N D P S+DY+HR+GRTAR+ G A TF +
Sbjct: 478 LIATDVASRGLDIPHVDVVLNLDIPTHSKDYMHRVGRTARAGRSGRAITFVS 323
Score = 67.0 bits (162), Expect(2) = 7e-35, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = -2
Query: 218 ICIATPGRLIDFLESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW 276
I IATPGRL+D LE+ K +LR +LV+DEADR+LDM F+ ++ KI+ I +R T ++
Sbjct: 995 IIIATPGRLVDHLENTKGFSLRALKFLVMDEADRILDMNFQDEVDKILKVIPRERNTYLF 816
Query: 277 SATWPKEV 284
SAT +V
Sbjct: 815 SATMTNKV 792
>19172
Length = 484
Score = 144 bits (363), Expect = 1e-34, Method: Composition-based stats.
Identities = 70/114 (61%), Positives = 83/114 (72%)
Frame = -1
Query: 290 DFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETK 349
+FL +Y Q+N+G+L LSANHNILQIVDVC ESEK KLIQL+ +I E E KTIIFVETK
Sbjct: 484 EFLNNYIQVNIGSLSLSANHNILQIVDVCDESEKIAKLIQLLTQISGENETKTIIFVETK 305
Query: 350 XXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 403
GW A IHGDKSQ ERD+VL+ FR+G+ IL+ATDVA+RGL
Sbjct: 304 KRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGL 143
>00162
Length = 2322
Score = 117 bits (294), Expect(2) = 1e-31, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 130/282 (46%), Gaps = 4/282 (1%)
Frame = +3
Query: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
L++ PTRELA Q+ +V + + + GG + L I I T GRL+
Sbjct: 147 LIITPTRELAFQIYEVLNKIRTFHDFSANLVIGGKFMWRET-HLMGKTNIVICTVGRLLH 323
Query: 229 FLESGKT-NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 287
LES + ++ LVLDEADR++D F + I+ + P RQTL++SAT V+ L
Sbjct: 324 HLESTQAFDVSELKVLVLDEADRIMDSKFAQDMDSIMSHL-PPRQTLLFSATQTMSVKTL 500
Query: 288 AEDFLRDYTQINVG-NLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFV 346
A L+D + ++V + E + Q VC E KL L + NK ++F+
Sbjct: 501 ARLSLKDPSYVSVDRHAEYVTPTGLEQSYIVC---ELHEKLSLLYSFLKNHPNNKIMVFL 671
Query: 347 ET--KXXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLD 404
+T + G + +HG Q R + EF + ILI TD+A RGLD
Sbjct: 672 QTCKQARYVHTVIKRERPGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLD 851
Query: 405 VEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPG 446
V +VI D P Y+HR GRTAR G A P
Sbjct: 852 FPAVNWVIQLDCPVDVNTYIHRAGRTARFECNGQALLVLLPS 977
Score = 37.4 bits (85), Expect(2) = 1e-31, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 125 LALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 166
LA G D++G A+TGSGKTLA+L+P + ++ Q + G
Sbjct: 20 LACRGLDVLGAAKTGSGKTLAFLIPILETLSKQDIISIWHGS 145
>07310
Length = 712
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 120/243 (49%)
Frame = +2
Query: 225 RLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEV 284
R++D + C LVLDEAD++L F+ + I+ + P RQ L++SAT+P V
Sbjct: 2 RILDLMNKRLVKPDTCGILVLDEADKLLSQDFKGMLDNIIAHLPPQRQILLYSATFPLSV 181
Query: 285 RQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTII 344
Q + +L++ +IN+ +E + Q E +K H L L ++ N++II
Sbjct: 182 EQFMKKYLKNPYEINL--MEELTLKGVTQYYAFVQEKQKVHCLNTLFSKLQI---NQSII 346
Query: 345 FVETKXXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLD 404
F + G+ IH +Q R+ V ++FR G L+ +D+ +RG+D
Sbjct: 347 FCNSTQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGID 526
Query: 405 VEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQA 464
++ V VIN+D+P +E Y+HRIGR+ R + G A T + L K+ +E
Sbjct: 527 IQAVNVVINFDFPKHAETYLHRIGRSGRYGHLGVAINLIT---FEDRFSLHKIEQELGTE 697
Query: 465 INP 467
I P
Sbjct: 698 IKP 706
>00739
Length = 1313
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 133/254 (52%), Gaps = 2/254 (0%)
Frame = +3
Query: 208 QIRDLERGVEICIATPGRLIDFLESGKT-NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ 266
Q +DL I I+TPGRL D ++S T +L+R +LV+DEADR+LD F Q+ I+ +
Sbjct: 18 QGQDLAVKPHIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDDNFGAQLEPILTR 197
Query: 267 IRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 326
+ RQTL++SAT V L + L + + + E + + + + S KD
Sbjct: 198 LPSARQTLLFSATLSPTVNALRDSVL-NKPFVWIQQSERATVDELQEDYVLVPASMKDAY 374
Query: 327 LIQLMEEIMAEK-ENKTIIFVETKXXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEF 385
++ +++ + + + IIF T + +H Q R L+ F
Sbjct: 375 MVHILDHWLKDHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFRLSSLSRF 554
Query: 386 RSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTP 445
+S + ILI+TDVASRGLD+ V +IN++ PN DYVHR+GRTAR+ G + + T
Sbjct: 555 KSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDYVHRVGRTARAGRCGQSISLVTE 734
Query: 446 GNLKQARELIKVLE 459
++K LIK +E
Sbjct: 735 FDIK----LIKSIE 764
>12121
Length = 465
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 72/108 (66%)
Frame = -2
Query: 34 PGERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFA 93
PG LRK KWDLS+L +FEK+FY E P VA P ++ E R +IT+ G P P+
Sbjct: 323 PGANLRKPKWDLSKLVRFEKHFYKEAPSVANRNPIQIQEFRNNNQITL-SGRYLPNPILT 147
Query: 94 FHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSG 141
F AN P YVM + ++T PTPIQ Q +P+A+SG+D+VGIAQTGSG
Sbjct: 146 FEEANLPDYVMSQIHRNNWTSPTPIQSQSWPIAMSGKDLVGIAQTGSG 3
Score = 86.7 bits (213), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 52/87 (59%), Gaps = 13/87 (14%)
Frame = -3
Query: 218 ICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ---IRPDRQTL 274
ICIATPGRLIDFLES +TNLRRCTYLVLDEADRMLDMGF P R + P +
Sbjct: 463 ICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFXPP*RACSLEPTCASPSGTSP 284
Query: 275 MWSA----------TWPKEVRQLAEDF 291
WSA WP E + + F
Sbjct: 283 NWSALRNTSTKRLLVWPIETQYRYKSF 203
>33025
Length = 558
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 95/155 (61%), Gaps = 4/155 (2%)
Frame = +3
Query: 188 YGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDE 247
+ + + + + +YG + Q + +G + + TPGRL+DF+ +L +C YL+LDE
Sbjct: 24 FSRGTDVHPSVVYGATDRRYQKSRIMKGANLVVGTPGRLLDFIGDQTISLGKCQYLILDE 203
Query: 248 ADRMLDMGFEPQIRKIVDQI----RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNL 303
ADRMLDMGFEP+IRK+VD + RQTLM+SAT+ +++++LA DFL DY I VG +
Sbjct: 204 ADRMLDMGFEPEIRKLVDTHGMPPKTQRQTLMFSATFKEDIQRLAGDFLNDYLFITVGIV 383
Query: 304 ELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 338
+ + ++V ++DH L +++ E+ K
Sbjct: 384 GGACSDVTQTFLEVDRLQKRDH-LCEILNEMGTAK 485
>22006
Length = 3414
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 82/140 (58%)
Frame = +2
Query: 115 PTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT 174
PTPIQ + P+ + G+DMV +A+TGSGKT A+L+P + + + G L+L+PT
Sbjct: 3005 PTPIQRKTIPVIMEGKDMVAMARTGSGKTAAFLVPMLERLK----MHSSKGARALILSPT 3172
Query: 175 RELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 234
RELA Q + + GK L++ I GG Q L + +I IATPGRL+ L K
Sbjct: 3173 RELALQTLKFTKELGKFLDLRAAVILGGDRMEDQFSALHQNPDIIIATPGRLLHVLVEMK 3352
Query: 235 TNLRRCTYLVLDEADRMLDM 254
+L+ Y+V DEADR+ +M
Sbjct: 3353 KSLKEVIYVVFDEADRLFEM 3412
>34134
Length = 271
Score = 95.5 bits (236), Expect(2) = 4e-23, Method: Composition-based stats.
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = +3
Query: 124 PLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT 174
P+A+SGRD VGIAQTGSGKTL+++LPAIVHINHQP LERGDGPI LVL PT
Sbjct: 87 PIAMSGRDCVGIAQTGSGKTLSFILPAIVHINHQPTLERGDGPIALVLVPT 239
Score = 31.2 bits (69), Expect(2) = 4e-23, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 97 ANFPQYVMDVLMDQHFTEPTPIQCQGFPL 125
A FP YVM + + PT IQ QG PL
Sbjct: 7 ACFPDYVMQQIHKNSWVSPTAIQSQGCPL 93
>17544
Length = 1047
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Frame = +2
Query: 84 GDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKT 143
GD P + +F + + + ++ + +PTP+Q P+ L RD++ AQTGSGKT
Sbjct: 608 GDSPPPHINSFEECTLGEIIRNNIVLSKYNKPTPVQKFALPIVLGKRDLMACAQTGSGKT 787
Query: 144 LAYLLPAIVHI------------NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKC 191
A+LLP + + N R PI L+LAPTRELA Q+ A +
Sbjct: 788 AAFLLPILNQVYENGPTPEALQQNQSRGYRRKMYPIALILAPTRELASQIYDEARKFAYR 967
Query: 192 SRLKSTCIYGGAPKGPQIRDLERGV 216
SRL+ +YGGA G Q+RDL++G
Sbjct: 968 SRLRPCVVYGGADIGAQMRDLDKGC 1042
>14337
Length = 693
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%)
Frame = +2
Query: 342 TIIFVETKXXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASR 401
++FV++K IH DK Q ERD + F G+ +L+ T++ R
Sbjct: 65 VLVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDATVRAFTEGRVWVLVCTELMGR 244
Query: 402 GLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEA 461
G+D + + VINYD+P ++ Y+HRIGRT R+ G A TFFT ++ R + +++EA
Sbjct: 245 GIDFKGINLVINYDFPTNAVSYIHRIGRTGRAGVPGRAITFFTEQDVTHLRSIANIIKEA 424
Query: 462 NQAINPKLMQL 472
+ +++L
Sbjct: 425 GCEVPEYMLRL 457
>08036
Length = 1226
Score = 60.1 bits (144), Expect(2) = 3e-18, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%)
Frame = +1
Query: 220 IATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSAT 279
+ TP R++ L +G L LV+DEAD + G E ++K+++++ Q + SAT
Sbjct: 4 VGTPSRILAHLRAGHLELHTVQMLVVDEADLVFSFGHEADMKKLMEELPRIYQAFLMSAT 183
Query: 280 WPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKE 339
++V+ L + L + + + +L + + Q C +K ++ +++ +
Sbjct: 184 LSEDVKALKKMVLHNPVILKLKESQLPESTQLTQYHVKCEVDDKFTLMVAVLK--LGLVR 357
Query: 340 NKTIIFVETKXXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 397
K+I+FV + G PA ++ + R ++++F G I+IA+D
Sbjct: 358 GKSILFVNSVDSCYKLKLFLEPFGIPACVLNSELPVKSRCHIVSQFNEGLYDIIIASD 531
Score = 50.1 bits (118), Expect(2) = 3e-18, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = +3
Query: 400 SRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 444
+RG+D ++V VIN+++P + + Y+HR+GRTAR +G A + +
Sbjct: 612 ARGIDFQNVSNVINFEFPKTVDAYIHRVGRTARGDKQGCALSLIS 746
>34295
Length = 694
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = -1
Query: 342 TIIFVETKXXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASR 401
+IF TK +C+HG Q ER L+ F+S LIATDVA+R
Sbjct: 535 VMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLIATDVAAR 356
Query: 402 GLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT-PGNLKQARELIKVLEE 460
GLD+ V+ VIN+ P + ++Y+HR+GRTAR+ KG A + F P +L EL+ +EE
Sbjct: 355 GLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGVAISIFRFPRDL----ELLGAIEE 188
Query: 461 ANQAINPKLMQ 471
IN KL +
Sbjct: 187 ---EINTKLTE 164
>19525
Length = 585
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Frame = +2
Query: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEIC----IATPG 224
LVL PTRELA QV QV + +++ S C+ G G I+ E + +C +ATPG
Sbjct: 23 LVLVPTRELAVQVYQVGQQISQYTKI-SICLAAG---GLDIKGQEAALRLCPDIVVATPG 190
Query: 225 RLIDFLESG-KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
RLID L + + LVLDEADRMLD F Q+ +I+ RQT+++SAT
Sbjct: 191 RLIDHLHNAPNFTIAHVEILVLDEADRMLDEYFAAQMTEIIRMCNFQRQTMLFSATMSDA 370
Query: 284 VRQLAEDFLRDYTQINVG 301
V+ LA L++ ++ V
Sbjct: 371 VQDLASVSLKEAVKVFVN 424
>17708
Length = 882
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 66/102 (64%)
Frame = +1
Query: 130 RDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYG 189
RD++G A+TGSGKTLA+L+PAI + ++ R +G C++++PTREL+ Q V +
Sbjct: 553 RDLMGAAKTGSGKTLAFLIPAIELMYKLKFMPR-NGTGCIIISPTRELSMQTFNVLTELL 729
Query: 190 KCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 231
K I GG + +++ L++GV I +ATPGRL+D L+
Sbjct: 730 KYHHHTFGLIMGGVNRHDEVKKLKKGVNIIVATPGRLLDHLQ 855
>19640
Length = 456
Score = 78.6 bits (192), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 52/86 (60%)
Frame = -1
Query: 344 IFVETKXXXXXXXXXXXXXGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 403
IF T+ + +HGD Q +R+ ++ +FRSG + +LI TD+ +RG+
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 404 DVEDVKFVINYDYPNSSEDYVHRIGR 429
DV+ V VINYD P++ E+Y+HRIGR
Sbjct: 276 DVQQVSLVINYDLPSNRENYIHRIGR 199
>02498
Length = 1955
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 6/208 (2%)
Frame = +1
Query: 91 VFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSG--RDMVGIAQTGSGKTLAYLL 148
V +F N ++ + D F P+ IQ P+ L+ +M+ +Q+G+GKT A++L
Sbjct: 130 VKSFEALNLKPQLLKGVYDMGFNAPSKIQETALPILLADPPVNMIAQSQSGTGKTAAFVL 309
Query: 149 PAIVHIN-HQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGP 207
+ ++ Q + P CL LAPT ELA Q+ +V + K S+ + A +G
Sbjct: 310 TMLSRVDISQTF------PQCLCLAPTYELALQIGEVIE---KMSKHMTGLEIRYAVRGE 462
Query: 208 QIRDLERGVE-ICIATPGRLIDFLESGKT-NLRRCTYLVLDEADRMLDM-GFEPQIRKIV 264
++ E E I I TPG ++D+ K L + VLDEAD M+ M G + Q +I
Sbjct: 463 RVNRGEVLSEQIVIGTPGTVMDWSHRFKALPLEKLRVFVLDEADVMISMQGHQDQSTRIQ 642
Query: 265 DQIRPDRQTLMWSATWPKEVRQLAEDFL 292
++ Q L++SAT+ + V Q A+ +
Sbjct: 643 KRLSSGCQMLLFSATYDQVVMQFAQRII 726
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = +3
Query: 371 GDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNS------SEDYV 424
G+ + +R ++ FR GK +LI T+V++RG+DVE V V+N+D P + E Y+
Sbjct: 954 GELTIEQRAAIIKRFREGKEKVLITTNVSARGIDVEMVTVVVNFDLPVTQDWRPDCETYL 1133
Query: 425 HRIGRTARSTNKGTA 439
HRIGRT R G A
Sbjct: 1134 HRIGRTGRFGKNGIA 1178
>11160
Length = 646
Score = 69.7 bits (169), Expect(2) = 2e-14, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Frame = -1
Query: 212 LERGVEICIATPGRLIDFL---ESG---KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 265
++ G I IATPGRL D ESG +++ LVLDEADR+LDMGFE I I+
Sbjct: 610 MKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLLDMGFEASINTILG 431
Query: 266 QIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSA---NHNILQIVDVCMESE 322
+ R+T ++SAT EV L LR+ ++ V +L+ + + M E
Sbjct: 430 HLPKLRRTGLFSATQTDEVENLIRAGLRNPLRVTVKEKKLAGEADQRTPSTLSNYYMIVE 251
Query: 323 KDHKLIQLMEEIMAEKENKTIIFVET 348
+ K QL++ + +K ++F T
Sbjct: 250 AEEKFSQLVKFLKTHHRDKLLLFFST 173
Score = 27.7 bits (60), Expect(2) = 2e-14, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 366 AMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLD 404
A + + + E V +FRS + +L+ TDV +RG+D
Sbjct: 119 AGVVDSQQDEAEEKPVFAKFRSITSGLLVCTDVMARGVD 3
>00617
Length = 1505
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%)
Frame = -3
Query: 364 WPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDY 423
+ +H Q R L+ F+S + ILI+TDVASRGLD+ V +IN++ PN DY
Sbjct: 1482 FSCAVLHSMIPQRFRLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDY 1303
Query: 424 VHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLE 459
VHR+GRTAR+ G + + T ++K LIK +E
Sbjct: 1302 VHRVGRTARAGRCGQSISLVTEFDIK----LIKSIE 1207
>12995
Length = 1072
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 67/125 (53%)
Frame = +3
Query: 318 CMESEKDHKLIQLMEEIMAEKENKTIIFVETKXXXXXXXXXXXXXGWPAMCIHGDKSQPE 377
C +K+ L+ L+ ++++E + T++FV TK G I+ Q
Sbjct: 69 CRADDKEAMLLYLLRDVISEND-LTVVFVATKHHVEYLNTLLTKCGIACTYIYSSLDQTA 245
Query: 378 RDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKG 437
R + +F + +++ TD+A+RG+D+ + V+N+ +P ++ +VHR+GR AR+ G
Sbjct: 246 RKIHVAKFTHKQVKVMLVTDLAARGIDIPQLDNVVNFHFPAKAKLFVHRVGRVARAGRSG 425
Query: 438 TAYTF 442
TAY+
Sbjct: 426 TAYSL 440
>11624
Length = 2257
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Frame = -1
Query: 378 RDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKG 437
R +L +F GK +L+ +D +RG+DV++VK+VI+YD P + Y+HR+GRTAR+ G
Sbjct: 784 RKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNPPYIKTYIHRVGRTARAGRAG 605
Query: 438 TAYTFFTPGNLKQAREL---------IKVLEEANQAINPKLMQL 472
TA + +++ IK ++ QA+ P + Q
Sbjct: 604 TAISLLEKKEFFHFKQMMREAGKWKKIKEMKLGRQALKPLVPQF 473
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Frame = -3
Query: 126 ALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ--PYLERGDGPICLVLAPTRELAQQVQQ 183
L RD+ A TGSGKTLAY LP I + + P++ +++ P R+LA+QV Q
Sbjct: 1826 GLRPRDICVSAPTGSGKTLAYTLPIIQCLKQRMVPHVR------AVIVLPVRDLAEQVYQ 1665
Query: 184 VADDYGKCSRLKSTCIYGGAPKGPQIRDLERG---------VEICIATPGRLIDFLESGK 234
V Y + LK + G + L + ++I +ATPGRL+D + S
Sbjct: 1664 VFCHYCADTPLKVGIVVGKTVFNVEQDTLVKKRYGGVYHSVIDILVATPGRLVDHINSTP 1485
Query: 235 T-NLRRCTYLVLDEADRMLD 253
+L +LV+DEADRM++
Sbjct: 1484 GFDLSHLRFLVIDEADRMME 1425
>39583
Length = 234
Score = 68.6 bits (166), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 43/57 (75%)
Frame = -3
Query: 377 ERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARS 433
+R L F+ G+ +L+ATD+ASRGLD+E VK VIN+ P++ + YVHR+GRTAR+
Sbjct: 175 QRLEALKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTLKHYVHRVGRTARA 5
>10649
Length = 472
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 40/84 (47%)
Frame = +1
Query: 363 GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED 422
G + +HG Q R + EF + ILI TD+A RGLD V +VI D P
Sbjct: 64 GMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLDCPVDVNT 243
Query: 423 YVHRIGRTARSTNKGTAYTFFTPG 446
Y+HR GRTAR G A P
Sbjct: 244 YIHRAGRTARFECNGQALLVLLPS 315
>03381
Length = 1206
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 403 LDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEAN 462
LD+ ++ V+NYD + + HR+GRT R+ KG+AYT T + + A L++ LE AN
Sbjct: 3 LDIPHIRTVVNYDVARDIDTHTHRVGRTGRAGEKGSAYTLITDKDKEFAPLLVRNLEGAN 182
Query: 463 QAINPKLMQLVDH 475
Q P L+ L +
Sbjct: 183 QTPPPALLDLANQ 221
>31899
Length = 453
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = -1
Query: 82 RGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSG 141
R DV F + V++ L + F P+PIQ + PL G D++ A++G+G
Sbjct: 375 RTNDVMTSESVDFASLLLSKPVLNGLKNAGFERPSPIQLKAIPLGRCGLDLIVQAKSGTG 196
Query: 142 KTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKC-SRLKSTCIY 200
KT + + A+ I + LVLAPTRE+A Q+ +V + G S L+
Sbjct: 195 KTCVFSVVALEGIETTARSTQ-----VLVLAPTREIALQIWEVINSIGSAMSGLQCHTFI 31
Query: 201 GGAP 204
GG P
Sbjct: 30 GGLP 19
>31220
Length = 818
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%)
Frame = +2
Query: 399 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 458
ASRG+D + V VIN+D+P Y+HR GRTAR N G+ +F + L
Sbjct: 161 ASRGIDFQGVNNVINFDFPLDVTSYIHRAGRTARGNNTGSVLSFVSVKELP--------- 313
Query: 459 EEANQAINPKL 469
NQA+ KL
Sbjct: 314 --INQAVEEKL 340
>19151
Length = 625
Score = 52.4 bits (124), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Frame = -3
Query: 392 ILIATDVASRGLDVEDVKFVINYDYP------NSSEDYVHRIGRTARSTNKGTA 439
+LI T+V SRG+D+E V V+N+D P E Y+HRIGRT R G A
Sbjct: 620 VLITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIA 459
>33083
Length = 1931
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 401 RGLDVEDVKFVINYDYPNSSEDYVHRIGRTARST-NKGTAYTFFTPGNL 448
RGLD+ V +++ YD P+ S++Y+HR+GRTAR + G A P L
Sbjct: 1 RGLDIPQVDWIVQYDPPDESKEYIHRVGRTARGEGSSGKALLLLQPEEL 147
>11423
Length = 1434
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Frame = -2
Query: 409 KFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL---------IKVLE 459
K+VI+YD P + Y+HR+GRTAR+ GTA + +++ IK ++
Sbjct: 1397 KYVISYDNPPYIKTYIHRVGRTARAGRAGTAISLLEKKEFFHFKQMMREAGKWKKIKEMK 1218
Query: 460 EANQAINPKLMQL 472
QA+ P + Q
Sbjct: 1217 LGRQALKPLVPQF 1179
>06438
Length = 989
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = +1
Query: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTP 445
+ +A RGLD V +VI D P Y+HR GRTAR G A P
Sbjct: 25 LTVTLACRGLDFPAVNWVIQLDCPVDVNTYIHRAGRTARFECNGQALLVLLP 180
>01821
Length = 910
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +1
Query: 393 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQ 450
L++T V GLD+ DV ++ YD S V R+GRT R +G T G +Q
Sbjct: 13 LVSTCVGEEGLDIGDVDLIVCYDAHKSPVRLVQRMGRTGRK-RQGRIVMLMTEGKEEQ 183
>27757
Length = 458
Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -2
Query: 414 YDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAIN 466
+D+P + H +G ++ K + Y+ P ++K+ARE +L AN ++
Sbjct: 307 HDHPGRLQTAEHHLGSSSEEICKKSWYSMLHPEDIKEAREKHVLLLRANHELS 149
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|52317148|ref|NP_067467.2| adaptor-related protein
complex 3, beta 2 subunit [Mus musculus]
(1082 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
31995 387 e-129
06708 165 1e-40
>31995
Length = 1263
Score = 387 bits (994), Expect(2) = e-129, Method: Compositional matrix adjust.
Identities = 192/263 (73%), Positives = 224/263 (85%)
Frame = -2
Query: 344 LVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLAN 403
L+RLLRSH E+QYVVL +VATM+ KR+GMFEPYLKSFY+RS+DP IK+LKLE+LTNLA
Sbjct: 1262 LIRLLRSHQEIQYVVLSDVATMTTKRKGMFEPYLKSFYVRSSDPLHIKLLKLEILTNLAT 1083
Query: 404 ETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVV 463
ETNI T+LREFQTY+ S DK+F AATIQAIGRCA++I V DTCLNGLV L+SNRBE VV
Sbjct: 1082 ETNISTILREFQTYVTSSDKEFAAATIQAIGRCASSICEVTDTCLNGLVHLMSNRBEAVV 903
Query: 464 AESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVL 523
AESVVVIKKLLQM+P +H II H+A++ D I VPMARASILWLIGEY E VPKIAPDVL
Sbjct: 902 AESVVVIKKLLQMRPNEHKGIICHMARMVDKITVPMARASILWLIGEYSERVPKIAPDVL 723
Query: 524 RKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLTQYVLSLAKYDQNYDIRDRARFTR 583
RK+AKSFT+EEDIVKLQV+NLA KL +TN KQTKLL QYVL+LAKYDQNYDIRDR+RF R
Sbjct: 722 RKLAKSFTSEEDIVKLQVLNLATKLCITNPKQTKLLCQYVLNLAKYDQNYDIRDRSRFLR 543
Query: 584 QLIVPSEQGGALSRHAKKLFLAP 606
Q+++P E G S++AK+ P
Sbjct: 542 QMVLPGENGCVFSKYAKRCSWPP 474
Score = 96.3 bits (238), Expect(2) = e-129, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Frame = -3
Query: 609 APILESSFKDRDHFQLGSLSHLLNAKATGYQELPDWPEEAPDPSVRNVEVPE-WTKCSNR 667
AP+L S FKDRD FQLG+LSH+LN + TGYQELP+WPE APDPSVRNVE+P WT+ ++
Sbjct: 469 APVLASKFKDRDFFQLGTLSHVLNMRTTGYQELPEWPEAAPDPSVRNVELPPVWTEKPSK 290
Query: 668 --EKRKEKEKPFY 678
K+K+ K FY
Sbjct: 289 VSTKKKQDLKSFY 251
>06708
Length = 980
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 124/221 (56%)
Frame = +1
Query: 860 QELLHRVAGEGLSVDYAFSRQPFSGDPHMVSLHIYFSNNSETPIKGLHVGTPKLPAGISI 919
ELL+R++G GLS+ Y F+R P MVS+ NN +TP+ + +G K+ G+ +
Sbjct: 199 HELLNRISGSGLSISYKFTRTISVFSPKMVSIEWTLINNGDTPLTSIKLGDTKVQPGMEV 378
Query: 920 QEFPEIESLAPGESTTTVMGINFCDSTQAANFQLCTQTRQFYVSIQPPVGELMAPVFMSE 979
Q FPEI SL G ST+ +MGINF D+TQ A +C +F VSI PVGEL+ P MSE
Sbjct: 379 QPFPEIASLGVGASTSVLMGINFNDTTQPAAMDVCVGEHKFKVSITAPVGELLQPHTMSE 558
Query: 980 NEFKKEQGKLTGMNEITEKLTLPDTCRSDHMVVQKVTATANLGRVPCGTSDEYRFAGRXX 1039
+F +QGKL GMNE + + + + S + V NL +VP + +RFA +
Sbjct: 559 GDFTLQQGKLGGMNENSASVAIDEETGSAKAICTSVLTAGNLLQVPSSDENIFRFAAKTL 738
Query: 1040 XXXXXXXXXXDARAAGAAQLTVNSEKMVIGTMLVKDVIQAL 1080
A++TVNSEKMVI ML+KDV +A+
Sbjct: 739 ASGTLVLVTVKTSEK-KAKVTVNSEKMVICAMLLKDVQKAM 858
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|7710042|ref|NP_057930.1| IQ motif containing GTPase
activating protein 1 [Mus musculus]
(1657 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13259 458 e-129
17703 150 3e-39
30880 141 2e-33
>13259
Length = 1751
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/477 (52%), Positives = 323/477 (67%), Gaps = 48/477 (10%)
Frame = +2
Query: 14 RPHYGSVLDNERLTAEEMDERRRQNVAYEYLCHLEEAKRWMEACLGEDLPPTTELEEGLR 73
+PHY L++ RLTA+EMDE+R++N+AYEYLCHLEEAK W++AC+ EDLPPTTELEEGLR
Sbjct: 284 KPHY-RTLEDARLTADEMDEQRKRNIAYEYLCHLEEAKVWIQACINEDLPPTTELEEGLR 460
Query: 74 NGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDEIGLPKIFY 133
NGV+LAKLG+FF+ VVSLKKIYD++QTRYK+ GLHFRHTDN+ WL AM+E+GLP IFY
Sbjct: 461 NGVFLAKLGHFFAAXVVSLKKIYDKDQTRYKSRGLHFRHTDNINHWLRAMEEVGLPTIFY 640
Query: 134 PETTDIYDRKNMPRCIYCIHALSLYLFKLGLAPQIQDLYGKVDFTEEEINNMKIELEKYG 193
PETTDIYDRKN+PR +YC+HALSLYLFKLGLAPQIQDLYGK++FTEEEI+ M+ EL+KYG
Sbjct: 641 PETTDIYDRKNIPRAVYCVHALSLYLFKLGLAPQIQDLYGKINFTEEEISAMRSELDKYG 820
Query: 194 IQMPAFSKIGGILANELSVDEAALHAAVIAINEAIDRRVAADTFTALKNPNAMLVNLEEG 253
IQMPAFSKIGGILANE++VD+AALHAA+IAINEA+D++VAADT TA++N +AMLVNL+
Sbjct: 821 IQMPAFSKIGGILANEMTVDDAALHAAIIAINEAVDQQVAADTMTAMQNASAMLVNLDPD 1000
Query: 254 LAPTYQDVLYQAKQDKMTNAKNRTE----------------------------------- 278
+A YQD LY AK K A+N+ E
Sbjct: 1001VAQHYQDQLYSAKHTKAEVARNKLEEIKSLAQRLQNPSLILYGTHEMTQGTRGGDGMPVK 1180
Query: 279 ------NSDRER----DVYEELLTQAEIQGNVNKVNTSSALANISLALEQGCAVTXXXXX 328
+ D ER DVY+ELLTQAEIQG +NKVN S AL ++ AL +G
Sbjct: 1181XNGQPGSIDPERSYDHDVYDELLTQAEIQGXINKVNISVALDRVNDALLKGDLSLLLAAL 1360
Query: 329 XXXXXXXRGLQTQNSDWYMKQLQS--DLQQKRQSGQTDPLQKEEVQAGVDAAN-SAAQQY 385
R + N+++Y +L+ +L++ +G+ L KEE+Q ++ AN A+ QY
Sbjct: 1361RVPSLGLRDVTDDNAEYYAAKLREAHELKKNNNNGEEXQLDKEELQQAINQANLEASAQY 1540
Query: 386 QRRLXXXXXXXXXXQKGIAEKTVLELMNPEAQLPQVYPFAADLYQKELATLQQQSPE 442
++ G A++ + N A PQVY FA LY +ELA ++ + E
Sbjct: 1541EKE-QAVKAVNAAIDSGEADQVLKAFQNSAALFPQVYDFAGXLYLEELACIKAEKQE 1708
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%)
Frame = +2
Query: 515 FITWNDIQACVDHVNLVVHEEHERILAIGLINEALDEGDAQKTLQALQIPAAKLEGVLAE 574
+T +IQ ++ VN+ V A+ +N+AL +GD L AL++P+ L V +
Sbjct: 1244 LLTQAEIQGXINKVNISV--------ALDRVNDALLKGDLSLLLAALRVPSLGLRDVTDD 1399
Query: 575 VAQHYQDTLIRAKREKAQETQDESAVLWLDEIQGGIWQSNKDTQEAQRFALGISAINEAV 634
A++Y L A K E L +E+Q I Q+N + + A+N A+
Sbjct: 1400 NAEYYAAKLREAHELKKNNNNGEEXQLDKEELQQAINQANLEASAQYEKEQAVKAVNAAI 1579
Query: 635 DSGDVGRTLSALRSPDVGLYGVIPECGETYQSDLAEAKKKR 675
DSG+ + L A ++ V G Y +LA K ++
Sbjct: 1580 DSGEADQVLKAFQNSAALFPQVYDFAGXLYLEELACIKAEK 1702
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 56/195 (28%)
Frame = +2
Query: 546 NEALDEGDAQKTLQALQIPAAKLEGVLAEVAQHYQDTLIRAKREK--------------A 591
NEA+D+ A T+ A+Q +A L + +VAQHYQD L AK K A
Sbjct: 914 NEAVDQQVAADTMTAMQNASAMLVNLDPDVAQHYQDQLYSAKHTKAEVARNKLEEIKSLA 1093
Query: 592 QETQDESAVLW-------------------------LD-----------------EIQGG 609
Q Q+ S +L+ +D EIQG
Sbjct: 1094 QRLQNPSLILYGTHEMTQGTRGGDGMPVKXNGQPGSIDPERSYDHDVYDELLTQAEIQGX 1273
Query: 610 IWQSNKDTQEAQRFALGISAINEAVDSGDVGRTLSALRSPDVGLYGVIPECGETYQSDLA 669
I + N ++ + +N+A+ GD+ L+ALR P +GL V + E Y + L
Sbjct: 1274 INKVN--------ISVALDRVNDALLKGDLSLLLAALRVPSLGLRDVTDDNAEYYAAKLR 1429
Query: 670 EAKKKRLAAGDNNSK 684
EA + L +NN +
Sbjct: 1430 EAHE--LKKNNNNGE 1468
>17703
Length = 542
Score = 150 bits (378), Expect(2) = 3e-39, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Frame = +3
Query: 1481 LINDIAKDIXXXXXXXXXXKAELVKLQQTYSALNSKATFYGEQVDYYKSYIKTCLDNLAS 1540
LIN I +DI K EL++++ ++LN K +FY Q+D+Y Y+KTCLDNL
Sbjct: 3 LINAIVQDIRNQRRYRNNRKQELLRVRNXLNSLNEKRSFYESQIDFYNQYVKTCLDNLQH 182
Query: 1541 KGKVSKKPREM-----XXXXXXXXXXXYTAARLHEKGVLLEIEDLQANQFKNVIFEIGPT 1595
K SKKP++ Y AA+LHEKGV+LEIE L NQFKNV+FEI T
Sbjct: 183 K---SKKPKKTGFFRRQGKQNATKSVQYNAAQLHEKGVVLEIESLPQNQFKNVLFEIAGT 353
Query: 1596 EEVGDFEVKAKFMGVQMETFMLHYQDLLQLQYEGVAVMKLF 1636
E+ G F+V AKFMGV M+ L +QDLLQLQYEGVAVMK+
Sbjct: 354 EDPGVFDVSAKFMGVAMDKVELVFQDLLQLQYEGVAVMKML 476
Score = 32.3 bits (72), Expect(2) = 3e-39, Method: Composition-based stats.
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 1637 DRAKVNVNLLIFLLNK 1652
+RAKVNVNLLIFLLNK
Sbjct: 476 NRAKVNVNLLIFLLNK 523
>30880
Length = 671
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 122/204 (59%)
Frame = +3
Query: 505 KAQAHAENNAFITWNDIQACVDHVNLVVHEEHERILAIGLINEALDEGDAQKTLQALQIP 564
K A N +T DI ++ V+ V EE ERI AI INEA+D+GD +TL +LQ+P
Sbjct: 63 KLSARRAQNPLLTHADIVDTIETVHQKVQEEQERIKAIESINEAIDKGDESETLASLQMP 242
Query: 565 AAKLEGVLAEVAQHYQDTLIRAKREKAQETQDESAVLWLDEIQGGIWQSNKDTQEAQRFA 624
+AKL + A HYQ L + K KA++TQDE AVLWL+EIQ + +N++ +E + +
Sbjct: 243 SAKLSNIDPLQAVHYQVLLAKEKDRKAEKTQDEGAVLWLEEIQSTVDHANRNAEEGLKMS 422
Query: 625 LGISAINEAVDSGDVGRTLSALRSPDVGLYGVIPECGETYQSDLAEAKKKRLAAGDNNSK 684
GI A+NEA+ + D ++ L + + G + V ECG TY L + +++++ +G++ S
Sbjct: 423 RGIQAVNEALATDDTDSLVAGL-TGEAGFHSVKTECGATYAEKLKQLQQEKMESGESGSG 599
Query: 685 WVKHWVKGGYHYYHNLETQAGGWA 708
W+ + V G +++N TQ WA
Sbjct: 600 WMMNRVADGSKFFYNAHTQQYAWA 671
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 3/152 (1%)
Frame = +3
Query: 455 EMLSSVALINRALESGDMTTVWKQLSSSVTGLTNIEEENCQRYLDELMK---LKAQAHAE 511
E + ++ IN A++ GD + L L+NI+ Y L K KA+ +
Sbjct: 159 ERIKAIESINEAIDKGDESETLASLQMPSAKLSNIDPLQAVHYQVLLAKEKDRKAEKTQD 338
Query: 512 NNAFITWNDIQACVDHVNLVVHEEHERILAIGLINEALDEGDAQKTLQALQIPAAKLEGV 571
A + +IQ+ VDH N E + I +NEAL D + L A V
Sbjct: 339 EGAVLWLEEIQSTVDHANRNAEEGLKMSRGIQAVNEALATDDTDSLVAGL-TGEAGFHSV 515
Query: 572 LAEVAQHYQDTLIRAKREKAQETQDESAVLWL 603
E Y + L + ++EK + ES W+
Sbjct: 516 KTECGATYAEKLKQLQQEKME--SGESGSGWM 605
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 220 AVIAINEAIDRRVAADTFTALKNPNAMLVNLEEGLAPTYQDVLYQAKQDK 269
A+ +INEAID+ ++T +L+ P+A L N++ A YQ +L + K K
Sbjct: 171 AIESINEAIDKGDESETLASLQMPSAKLSNIDPLQAVHYQVLLAKEKDRK 320
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|110625998|ref|NP_080676.3| DnaJ (Hsp40) homolog,
subfamily B, member 11 [Mus musculus]
(358 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14550 354 e-128
38321 80 1e-15
20488 76 3e-14
10680 74 1e-13
02324 72 4e-13
26984 68 5e-12
07620 48 1e-11
13998 64 6e-11
02088 64 9e-11
22505 38 7e-08
12040 50 1e-06
15360 37 0.013
33510 37 0.016
18150 36 0.031
13422 35 0.035
19018 34 0.10
20155 29 2.6
18599 28 6.3
>14550
Length = 1395
Score = 354 bits (908), Expect(2) = e-128, Method: Compositional matrix adjust.
Identities = 164/234 (70%), Positives = 198/234 (84%)
Frame = -2
Query: 124 QDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPG 183
+DR +PRG D+++DL+VTLEE+Y+G+FVEV+R KPV++ A GKRKCNCR E T QLGPG
Sbjct: 836 RDREVPRGGDVVMDLDVTLEELYSGDFVEVLRYKPVSKPAKGKRKCNCRMETVTQQLGPG 657
Query: 184 RFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRI 243
RFQM+Q+ VCDECPN+K V EE+ LEVEIEPG+RDG EYPF+ EGEPH+DGEPGDLRF I
Sbjct: 656 RFQMSQQQVCDECPNIKFVPEEKVLEVEIEPGMRDGQEYPFVAEGEPHMDGEPGDLRFII 477
Query: 244 KVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRDKITRPGAKLWKKG 303
+ VKH FER+GDDLYTNVTVSL +AL+GFEMDI HLDGHKVH+ RDKIT PGA++ K
Sbjct: 476 RQVKHARFERKGDDLYTNVTVSLQDALIGFEMDIVHLDGHKVHVIRDKITWPGARMRKSN 297
Query: 304 EGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAKEGIKQLLKQGPVQKVYNGLQG 357
EG+PN++NNN+KGSL ITFD+DFPK L+EE KEG+K +LKQ Q VYNGL G
Sbjct: 296 EGMPNYENNNVKGSLFITFDIDFPKGTLSEEDKEGLKAILKQDAKQMVYNGL*G 135
Score = 123 bits (308), Expect(2) = e-128, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 72/91 (79%), Gaps = 3/91 (3%)
Frame = -1
Query: 10 CLL---LLYLIGTVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEK 66
C L LL L V+ GRDFYKILGV +SA K IK+AYRK+A +LHPD+N DDP+A+++
Sbjct: 1188 CFLAVNLLLLFVQVLGGRDFYKILGVSKSADTKQIKRAYRKIAKELHPDKNRDDPEAEQR 1009
Query: 67 FQDLGAAYEVLSDSEKRKQYDTYGEEGLKDG 97
FQDLGAAYEVLSD EKRK YD +GEEGLK G
Sbjct: 1008 FQDLGAAYEVLSDEEKRKVYDRHGEEGLKQG 916
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = -1
Query: 299 LWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAKEGIKQLLKQGPVQKVYNGLQG 357
+ K EG+PN++NNN+KGSL ITFD+DFPK L+EE KEG+K +LKQ Q VYNGL G
Sbjct: 1395 MRKSNEGMPNYENNNVKGSLFITFDIDFPKGTLSEEDKEGLKAILKQDAKQMVYNGL*G 1219
>38321
Length = 1059
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = -1
Query: 299 LWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAKEGIKQLLKQGPVQKVYNGLQG 357
+ K EG+PN++NNN+KGSL ITFD+DFPK L+EE KEG+K +LKQ Q VYNGL G
Sbjct: 1059 MRKSNEGMPNYENNNVKGSLFITFDIDFPKGTLSEEDKEGLKAILKQDAKQMVYNGL*G 883
>20488
Length = 3281
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%)
Frame = -2
Query: 205 ERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTV 264
++ L + ++ G + G + F EG+ + P D+ F +K H F R G +L V
Sbjct: 1588 DKILTITVKKGWKPGTKITFPKEGDQGPNNVPADIVFIVKDKPHPRFRREGLNLIHTANV 1409
Query: 265 SLVEALVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDV 324
L AL G +DI LD +HI + I +PG K GEG+P + KG LII F++
Sbjct: 1408 LLGRALTGTTVDIHTLDDRTLHIPINDIVKPGYKKIVPGEGMPMSSDPTZKGDLIIEFNI 1229
Query: 325 DFPKEQLTEEAKEGIKQLL 343
+FP LT E K+ I+ L
Sbjct: 1228 EFP-TSLTPERKDLIRTAL 1175
>10680
Length = 1093
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%)
Frame = -3
Query: 205 ERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTV 264
++ L + ++ G + G + F EG+ + P D+ F +K H F R G +L V
Sbjct: 731 DKILTITVKKGWKPGTKITFPKEGDQGPNNVPADIVFIVKDKPHPRFRREGLNLIHTANV 552
Query: 265 SLVEALVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDV 324
L AL G +DI LD +HI + I +PG K GEG+P + KG LII F++
Sbjct: 551 LLGRALTGTTVDIHTLDDRTLHIPINDIVKPGYKKIVPGEGMPMSSDPTQKGDLIIEFNI 372
Query: 325 DFPKEQLTEEAKEGIKQLL 343
+FP LT E K+ I+ L
Sbjct: 371 EFP-TSLTPERKDLIRTAL 318
>02324
Length = 2058
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +2
Query: 27 YKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD-PQAQEKFQDLGAAYEVLSDSEKRKQ 85
Y++LGV RSA D+KKAYRKLAL+ HPD+NPD +A +F+ + AYE+L+D ++R
Sbjct: 110 YEVLGVERSADNDDLKKAYRKLALKFHPDKNPDSVEEATAQFRLVQQAYEILTDPQERSW 289
Query: 86 YDTYGEEGLKDG 97
YD + E L+ G
Sbjct: 290 YDRHREAILRGG 325
>26984
Length = 1107
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = -2
Query: 23 GRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEK 82
G+D Y ILG+ AS +DIK+ YR+ A+ +HPD+N +P A+E F+ LG A+E++ D K
Sbjct: 521 GKDPYSILGLRADASDEDIKRYYRRQAVLVHPDKN-QEPGAEEAFKILGHAFEMIGDPTK 345
Query: 83 RKQYDTY 89
RK+YDT+
Sbjct: 344 RKEYDTH 324
>07620
Length = 1775
Score = 47.8 bits (112), Expect(2) = 1e-11, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 17 IGTVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRN 57
+ + A +D+Y++L V + + D+KKAYRKLALQ+HPD+
Sbjct: 76 VKRIKACKDYYEVLDVKKDCTESDMKKAYRKLALQMHPDKT 198
Score = 38.9 bits (89), Expect(2) = 1e-11, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 61 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEE 92
P A + F+ +G AY VLSD +KR++YD YG E
Sbjct: 204 PGATDAFKKIGNAYSVLSDPDKRRKYDVYGPE 299
>13998
Length = 1075
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Frame = +1
Query: 24 RDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPD---DPQAQE--KFQDLGAAYEVLS 78
+D+YKILG+ R+A+ +IKKAYRK AL HPDR+ + D + E KF+++G AY +LS
Sbjct: 202 KDYYKILGISRNATEDEIKKAYRKKALVHHPDRHANSSADVRKDEELKFKEVGEAYAILS 381
Query: 79 DSEKRKQYDT 88
D K+ +YD+
Sbjct: 382 DGAKKTRYDS 411
>02088
Length = 1062
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +3
Query: 13 LLYLIGTVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDR--NPDDPQAQEKFQDL 70
LL + D Y+++G+ R A+ +++KK Y K++L +HPD+ + A KFQ L
Sbjct: 72 LLQSCEELFETTDLYEVIGIRREATPQEVKKGYHKVSLAVHPDQVSAAEKETATRKFQTL 251
Query: 71 GAAYEVLSDSEKRKQYDTYGEEGLKD 96
G Y VLSD +KR YD GE G +D
Sbjct: 252 GKVYTVLSDKDKRAXYDETGEVGEED 329
>22505
Length = 784
Score = 38.1 bits (87), Expect(2) = 7e-08, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -1
Query: 21 IAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRN 57
I D Y ILGV A+ K I KAYRK AL+ HPD+
Sbjct: 664 IMKMDLYGILGVGPEANEKQIVKAYRKKALKCHPDKT 554
Score = 35.8 bits (81), Expect(2) = 7e-08, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 56 RNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDT 88
+NPD+P+A E F +L A EVL+D + YD
Sbjct: 560 QNPDNPKAAELFHELSKALEVLTDPSAKAAYDN 462
>12040
Length = 1151
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Frame = -2
Query: 247 KHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRDKITRPGAKLWKKG--- 303
+H F G DL + + LVEAL GF+ + +D + ++ T+PG + +
Sbjct: 1123 EHSTFVHAGTDLMMKMPLQLVEALCGFQRIVKTMDDRDLLVA----TQPGEVIRHEMTKC 956
Query: 304 ---EGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAKEGIKQLLKQGP 347
EG+P F N KG+LII F+V FP + + +KQ L P
Sbjct: 955 IAEEGMPIFKNPMEKGTLIIQFEVIFP-DVINPSVIPTLKQCLPPAP 818
>15360
Length = 502
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 33/52 (63%)
Frame = +1
Query: 27 YKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLS 78
+ +L +P + + +K Y++LAL+ HP+++ + +A ++F + AY +L+
Sbjct: 61 FNLLDIPAGSDQESLKTKYKQLALKWHPEKHKNAAEAVKQFIQVTQAYRLLA 216
>33510
Length = 501
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 12 LLLYLIGTVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQ---AQEKFQ 68
LL L + +K G+ S +KK YRK L +HPD+ DDP A+ F
Sbjct: 219 LLCSLDKVLWDSESRWKPCGMHDLVSADQVKKVYRKAVLSVHPDKLHDDPHEALAKLIFM 398
Query: 69 DLGAAYEVLSDSEKRKQY 86
+L A+ D + Y
Sbjct: 399 ELNDAWAKFEDEGMKSLY 452
>18150
Length = 768
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 73 AYEVLSDSEKRKQYDTYGEEGLK 95
A+E+LSD KR YDTYGE+GL+
Sbjct: 122 AHEILSDKHKRTIYDTYGEKGLE 190
>13422
Length = 930
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Frame = +1
Query: 12 LLLYLIGTVIAGRDFYKILGVPR---SASIKDIKKAYRKLALQLHPDRNPD-----DPQA 63
LLL L +D Y +LG+ + A+ IK+ YR+ L HPD+ +
Sbjct: 298 LLLGLNPKEWKKQDHYAVLGLSKLRYKATADHIKRIYRQKVLLHHPDKRRARGLHVENGE 477
Query: 64 QEKFQDLGAAYEVLSDSEKRKQYDT 88
+ F + AYE+L D KR+ +D+
Sbjct: 478 NDYFLCISRAYEILGDPVKRRSFDS 552
>19018
Length = 468
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 286 HISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFD-VDFPK 328
HISR K T + LW+ + NNNI+ + + T + F K
Sbjct: 374 HISRQKSTHMSSSLWRNANSIEYIYNNNIQNAQMYTLSYIHFKK 243
>20155
Length = 484
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 29 ILGVPRSASIKDIKKAYRKLALQLHPDR 56
ILGV SAS IK A++++ L HPDR
Sbjct: 151 ILGVSPSASKVKIKDAHKRIMLLNHPDR 234
>18599
Length = 452
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Frame = +3
Query: 130 RGSDIIVDLEVTLEEVYAGNFVE-------------VVRNKPVARQAPGKRKCNCRQEMR 176
RG+ ++ ++ LE+V GN+++ VRN VARQ K+ R ++
Sbjct: 51 RGTVRVLVMKQPLEDVLIGNYIQRGKGQSFEKIPVYAVRNMVVARQTQAKKFTEVRCSIK 230
Query: 177 TTQLG 181
T+ G
Sbjct: 231 ATRTG 245
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|134288898|ref|NP_034548.2| hect (homologous to the
E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain
(RLD) 2 [Mus musculus]
(4836 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05524 255 e-128
26574 260 9e-69
05501 127 1e-28
32927 127 1e-28
02386 119 4e-26
02938 115 6e-25
33148 89 5e-17
21239 77 2e-13
20162 76 4e-13
13725 64 2e-09
38263 54 2e-06
03352 51 1e-05
19738 41 3e-05
39525 50 3e-05
12101 49 3e-05
33425 48 1e-04
14299 47 1e-04
07471 44 0.001
01993 37 0.14
01451 37 0.18
11020 35 0.69
31200 35 1.0
37466 34 1.5
13682 33 2.2
03889 33 2.9
31463 32 4.4
08616 32 8.7
>05524
Length = 2623
Score = 255 bits (651), Expect(3) = e-128, Method: Composition-based stats.
Identities = 114/128 (89%), Positives = 120/128 (93%)
Frame = +2
Query: 4677 CGSPDIPLHLLKSVATYKGIEPSASLVQWFWEVMESFSNTERSLFLRFVWGRTRLPRTIA 4736
CGSPDIPL LLKSVATYKGIE +A LVQWFWEVM+ FS ERSLFLRFVWGRTRLPRTIA
Sbjct: 491 CGSPDIPLTLLKSVATYKGIEATAPLVQWFWEVMDEFSTAERSLFLRFVWGRTRLPRTIA 670
Query: 4737 DFRGRDFVIQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIHFCKSIDTD 4796
DFRGRDFV+QVLDKYNPPDHFLPESYTCFFLLK+PRYS K VL+EKLKYAIHFCKSIDTD
Sbjct: 671 DFRGRDFVLQVLDKYNPPDHFLPESYTCFFLLKMPRYSDKLVLKEKLKYAIHFCKSIDTD 850
Query: 4797 DYARIALT 4804
DYAR+ALT
Sbjct: 851 DYARVALT 874
Score = 132 bits (331), Expect(3) = e-128, Method: Composition-based stats.
Identities = 59/94 (62%), Positives = 77/94 (81%)
Frame = +3
Query: 4512 ESGANRDCYLLNPATRAPVHCSMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTI 4571
ESGANRDC+LLNP+ +P+H +MFRFLG+L+GIAIR+GSPLSL++AEP WKQLAGM L+I
Sbjct: 3 ESGANRDCFLLNPSLSSPLHQNMFRFLGILMGIAIRSGSPLSLSIAEPAWKQLAGMPLSI 182
Query: 4572 ADLSEVDKDFIPGLMYIRDNEATSEEFEAMSLPF 4605
+DL+E+DKDF+PGL+ I+ E E +PF
Sbjct: 183 SDLTEMDKDFVPGLICIK--EMGEEGLRTADMPF 278
Score = 114 bits (284), Expect(3) = e-128, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 63/73 (86%)
Frame = +1
Query: 4604 PFTVPSASGQDIQLSSKHTHITLDNRAEYVRLAINYRLHEFDEQVAAVREGMARVVPVPL 4663
P +VPSA+GQ+ QLS KH+ I DNRA+Y+++AINYRL EFD+QV VREGM+RV+PVPL
Sbjct: 274 PSSVPSATGQETQLSHKHSRINPDNRADYIKMAINYRLQEFDQQVRWVREGMSRVIPVPL 453
Query: 4664 LSLFTGYELETMV 4676
LSLFTG ELETMV
Sbjct: 454 LSLFTGLELETMV 492
>26574
Length = 441
Score = 260 bits (665), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 114/146 (78%), Positives = 132/146 (90%)
Frame = +3
Query: 4222 TWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEG 4281
TWGKGDYHRLGHG+DDHVRRPR+V LQGKKVI +A GSLHCV CT+ GEV+TWGDNDEG
Sbjct: 3 TWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDSGEVFTWGDNDEG 182
Query: 4282 QLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHLQ 4341
QLGDGTTNAIQRPR+VAALQGKK+NRVACGSAH+LAWST KP SAG+LP+Q+PME+NHL
Sbjct: 183 QLGDGTTNAIQRPRMVAALQGKKINRVACGSAHSLAWSTHKPVSAGRLPSQIPMEFNHLH 362
Query: 4342 EIPIIALRNRLLLLHHISELFCPCIP 4367
+ + +LRNRL+LLHH S+LFCP +P
Sbjct: 363 SLSMASLRNRLVLLHHFSDLFCPSLP 440
Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 85/111 (76%)
Frame = +3
Query: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG 3288
TWGKGDY RLGHG+D HVR+P+ V L+GKK++ VA G+LHC+A TDSG+V+ WGDND G
Sbjct: 3 TWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDSGEVFTWGDNDEG 182
Query: 3289 QQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPV 3339
Q G+GTT ++P +V L+G+KI RVACGS+HS+AW+T H+PV
Sbjct: 183 QLGDGTTNAIQRPRMVAALQGKKINRVACGSAHSLAWST--------HKPV 311
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 73/126 (57%)
Frame = +3
Query: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 740
+WGKGD RLGHGT++HVR P+ + LQGKKVIDVA GS HC+A T+ EV +WG ND+
Sbjct: 3 TWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDSGEVFTWGDNDEG 182
Query: 741 QHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDICSMTF 800
Q D P + L K I +ACG A S AWS+ S G R+P + M F
Sbjct: 183 QLGDGTTNAIQRPRMVAALQGKKINRVACGSAHSLAWSTHKPVSAG-RLPSQI---PMEF 350
Query: 801 EQLDLL 806
L L
Sbjct: 351 NHLHSL 368
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 64/98 (65%)
Frame = +3
Query: 3071 SWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
+WG+GD +LGH + + +PR + AL+ K++ D+ACGS H A T SGE++TWG + G
Sbjct: 3 TWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDSGEVFTWGDNDEG 182
Query: 3131 RLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
+LG G +P+MV L G ++ +VACGS A +LA
Sbjct: 183 QLGDGTTNAIQRPRMVAALQGKKINRVACGS--AHSLA 290
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%)
Frame = +3
Query: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
+WG+ + +LGHG RPR + +L+G +V+DVA G H T +G+++TWG G
Sbjct: 3 TWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDSGEVFTWGDNDEG 182
Query: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGS 4154
+LG + +P++V ALQG ++ +ACGS
Sbjct: 183 QLGDGTTNAIQRPRMVAALQGKKINRVACGS 275
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%)
Frame = +3
Query: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWXXXX 634
TWG+G+Y RLGHG+ + P V+ L+G KVIDVACGS +A T++G+V++W
Sbjct: 3 TWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGS--LHCVACTDSGEVFTWGDND 176
Query: 635 XXXXXXXXXXXCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
+ P+++ LQ + +V CGS S+A
Sbjct: 177 EGQLGDGTTNAIQRPRMVAALQGKKINRVACGSAHSLA 290
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +3
Query: 647 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 706
+ P+ + LQ VI V CGS +A T G+V++WG D +LG GT ++ P+++
Sbjct: 57 RRPRRVSALQGKKVIDVACGSLHCVACTDSGEVFTWGDNDEGQLGDGTTNAIQRPRMVAA 236
Query: 707 LQGKKVIDVAAGSTHCLALTEDSEV 731
LQGKK+ VA GS H LA + V
Sbjct: 237 LQGKKINRVACGSAHSLAWSTHKPV 311
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%)
Frame = +3
Query: 3123 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWXXXX 3182
TWG G+Y RLGHG + +P+ V L G +VI VACGS +A TD G VF+W
Sbjct: 3 TWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGS--LHCVACTDSGEVFTWGDND 176
Query: 3183 XXXXXXXXSEGCNIPQNIERLNGQGVCQIECGAQFSLA 3220
+ P+ + L G+ + ++ CG+ SLA
Sbjct: 177 EGQLGDGTTNAIQRPRMVAALQGKKINRVACGSAHSLA 290
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%)
Frame = +3
Query: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
G+ RLG G + V PR+++AL V VA G H A T G+VF+WG+ D+
Sbjct: 9 GKGDYHRLGHG-TDDHVRRPRRVSALQGKKVIDVAC--GSLHCVACTDSGEVFTWGDNDE 179
Query: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
G+LG + +PR++ AL+ K+I +ACGS+HS A ++
Sbjct: 180 GQLGDGTTNAIQRPRMVAALQGKKINRVACGSAHSLAWST 299
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +3
Query: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
+ P+ +SA GK+ V+ +ACGS + A T GE++TWG + G+LG G++ P
Sbjct: 54 VRRPRRVSALQGKK----VIDVACGSLHCVACTDSGEVFTWGDNDEGQLGDGTTNAIQRP 221
Query: 596 MLVAGLKGLKVIDVACGSGDAQTLA 620
+VA L+G K+ VACGS A +LA
Sbjct: 222 RMVAALQGKKINRVACGS--AHSLA 290
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +3
Query: 3197 PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLR 3256
P+ + L G+ V + CG+ +A T SG V+TWG D +LG G+ +++P++V L+
Sbjct: 63 PRRVSALQGKKVIDVACGSLHCVACTDSGEVFTWGDNDEGQLGDGTTNAIQRPRMVAALQ 242
Query: 3257 GKKIVHVAVGALHCLAVTDSGQVYA 3281
GKKI VA G+ H LA + V A
Sbjct: 243 GKKINRVACGSAHSLAWSTHKPVSA 317
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +3
Query: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG 4101
K + V G HC+A + GEV++WG+ ++G+LG G + RPR++ +L+G ++ VA G
Sbjct: 93 KVIDVACGSLHCVACTDSGEVFTWGDNDEGQLGDGTTNAIQRPRMVAALQGKKINRVACG 272
Query: 4102 GAHS 4105
AHS
Sbjct: 273 SAHS 284
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +3
Query: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWXXXXXXXXXXXDTVPLEEPKVISA 544
P+ V L + ++ +A S H +A +GEV++W T ++ P++++A
Sbjct: 63 PRRVSALQGKKVIDVACGSL--HCVACTDSGEVFTWGDNDEGQLGDGTTNAIQRPRMVAA 236
Query: 545 FSGKQAGKHVVHIACGSTYSAA 566
GK+ + +ACGS +S A
Sbjct: 237 LQGKKINR----VACGSAHSLA 290
>05501
Length = 1740
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 164/366 (44%), Gaps = 10/366 (2%)
Frame = -1
Query: 4432 SKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRVWKVKFVGESVDDCGGGYSESIAEI 4491
SK L G + F Q+ ++ F L R++ + F GE D GG E +
Sbjct: 1713 SKSMLHGKISYEDSFAQI-MRLQPFD-----LRRRLYII-FKGEEGLDYGGVAREWFFHL 1555
Query: 4492 CEELQNGLTPLLIVTPNGRDESGANRDCYL-LNPATRA-PVHCSMFRFLGVLLGIAIRTG 4549
++ N + L E +N + L +NPA+ P H FRF+G + +A+ G
Sbjct: 1554 SHDVLNPMYCLF--------EYASNNNYSLQINPASSVNPDHLLYFRFIGRFIAMALYHG 1399
Query: 4550 SPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRDNEATSEEFEAMSLP-FTV- 4607
+ P +K++ LT+ DL +D ++ L +++DN E F V
Sbjct: 1398 KFIDSGFTLPFYKRMLSKKLTLKDLETIDGEYFQSLQWVKDNNVEESGLELFFCADFEVL 1219
Query: 4608 PSASGQDIQLSSKHTHITLDNRAEYVRLAINYRLHE-FDEQVAAVREGMARVVPVPLLSL 4666
+++ +T +N+ EY+ L +R +EQ A EG VVP+ L
Sbjct: 1218 GKVENHELKPGGSEIKVTEENKEEYLNLMTQWRFSRGVEEQTKAFLEGFNEVVPLQWLQY 1039
Query: 4667 FTGYELETMVCGSPDIPLHLLKSVATYKGIEPSASLVQWFWEVMESFSNTERSLFLRFVW 4726
F ELE M+CG ++ + + Y+ + ++ V WFW+ + N +R+ L+FV
Sbjct: 1038 FDERELELMLCGMQEVDVDDWERNTIYRHYQRNSKQVTWFWKFVREIDNEKRTRLLQFVT 859
Query: 4727 GRTRLPR-TIADFRGRD----FVIQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEE 4781
G RLP A+ G + F I+ + K + +LP S+TCF + LP Y + L E
Sbjct: 858 GTCRLPVGGFAELMGSNGPQRFCIEKVGK----ETWLPRSHTCFNRIDLPPYRSYEQLVE 691
Query: 4782 KLKYAI 4787
KL AI
Sbjct: 690 KLNLAI 673
>32927
Length = 514
Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats.
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +3
Query: 4741 RDFVIQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIHFCKSIDTDDYAR 4800
RDFV+QVL+K NPPDHFLPESYTCFFLLK+PRYSCK VL EKLKYAIHFCKSIDTD+YAR
Sbjct: 3 RDFVLQVLEK-NPPDHFLPESYTCFFLLKMPRYSCKTVLLEKLKYAIHFCKSIDTDEYAR 179
Query: 4801 IALTGEP 4807
+A+ GEP
Sbjct: 180 VAM-GEP 197
>02386
Length = 2222
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 153/343 (44%), Gaps = 20/343 (5%)
Frame = +2
Query: 4468 WKVKFV----GESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRD--CYL 4521
WK +F GE D GG E I E+ N L P RD Y
Sbjct: 404 WKQRFYIVFEGEEGQDAGGLLREWYLIISREIFNENYVLFKRYP---------RDGVTYT 556
Query: 4522 LNPATR-APVHCSMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKD 4580
+NP++ H S F+F+G ++ AI L +K + G+ + D+ D
Sbjct: 557 INPSSHFNSNHLSYFKFVGRIIAKAIYDNKLLECYFTRSFYKHVLGLPVKYTDMECEDIM 736
Query: 4581 FIPGLMYIRDNEATSE-------EFEAMSLPFTVPSASGQDIQLSSKHTHITLDNRAEYV 4633
F L+++ +N+ T F A F V +D+ + + +T +N+ EYV
Sbjct: 737 FYQSLVFLLENDITDMGAALGDLNFSAEVEEFGVRET--RDLIENGSNIGVTEENKREYV 910
Query: 4634 RLAINYRLH-EFDEQVAAVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVAT 4692
+L ++ +Q+ A EG ++P L+++FT ELE ++ G P I + LK+
Sbjct: 911 KLVCQMKMTGAIRQQLNAFLEGFYDIIPKKLVAIFTEQELELLISGLPTIDIDDLKANTE 1090
Query: 4693 YKGIEPSASLVQWFWEVMESFSNTERSLFLRFVWGRTRLP-RTIADFRGRD----FVIQV 4747
Y +P++ +QWFW + SF ER+ FL+FV G +++P + A G + F I
Sbjct: 1091 YHKYQPTSLQIQWFWRALRSFDQAERANFLQFVTGTSKVPLQGFATLEGMNGHQKFQIHR 1270
Query: 4748 LDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIHFC 4790
D+ LP ++TCF L LP Y L + L A+ C
Sbjct: 1271 DDRSTDR---LPSAHTCFNQLDLPAYETYDKLRKMLLLAVSEC 1390
>02938
Length = 1718
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 2/264 (0%)
Frame = +3
Query: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126
G+VF +G D G+LG ++ ++P +++LK ++ R +ACG SH+ T SG +Y +G
Sbjct: 15 GRVFMFGPNDYGQLGIGAQKVANRPSCVKSLKHEKARLVACGRSHTIVATESGNIYAFGA 194
Query: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWXXXXXXXX 3186
G+LG T PK V L +A G +LALT++G VF W
Sbjct: 195 NGEGQLGVEGVTETNLPKQVDSLQATPWKMLAAGCD--HSLALTEDGRVFVWGGNGEGQL 368
Query: 3187 XXXXSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV-H 3245
+P+ ++ GQ V I G S +T+SG ++T+G+ D +LG D
Sbjct: 369 GMGEDSDIPVPRQLDV--GQSVACIASGYYHSALVTESGELYTFGESDGGKLGLNGDTDE 542
Query: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV-NRKPTLV 3304
+ PQ V + K+ V+ G H +A+T+ G+VYA+G+ GQ G G +T+ + P+L+
Sbjct: 543 CKTPQQVMAIN-DKVKSVSCGGSHTVALTEKGEVYAFGEGSSGQLGLGVSTLESESPSLL 719
Query: 3305 QGLEGQKITRVACGSSHSVAWTTV 3328
+ K+ +V CG + +TTV
Sbjct: 720 K--LPFKVAQVCCGEN----FTTV 773
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 2/262 (0%)
Frame = +3
Query: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4119
G V+ +G + G+LG G + +RP ++SL+ + VA G +H+ T +G++Y +G
Sbjct: 15 GRVFMFGPNDYGQLGIGAQKVANRPSCVKSLKHEKARLVACGRSHTIVATESGNIYAFGA 194
Query: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWXXXXXXXX 4179
G+LG + PK V++LQ +A G +L LT+D V+ W
Sbjct: 195 NGEGQLGVEGVTETNLPKQVDSLQATPWKMLAAGC--DHSLALTEDGRVFVWGGNGEGQL 368
Query: 4180 XXXXXXXCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDH 4238
VP ++D G V + G S +T+SG +YT+G+ D +LG +G D
Sbjct: 369 GMGEDSDIPVPRQLD--VGQSVACIASGYYHSALVTESGELYTFGESDGGKLGLNGDTDE 542
Query: 4239 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG-TTNAIQRPRLV 4297
+ P+QV + KV +++ G H V TE GEVY +G+ GQLG G +T + P L+
Sbjct: 543 CKTPQQVMAIN-DKVKSVSCGGSHTVALTEKGEVYAFGEGSSGQLGLGVSTLESESPSLL 719
Query: 4298 AALQGKKVNRVACGSAHTLAWS 4319
KV +V CG T S
Sbjct: 720 KLP--FKVAQVCCGENFTTVVS 779
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 153/349 (43%), Gaps = 10/349 (2%)
Frame = +3
Query: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
+ G+V+ G G+LG+G P + +L + VA G H T G +
Sbjct: 9 IYGRVFMFGPNDYGQLGIGAQK-VANRPSCVKSLKHEKARLVAC--GRSHTIVATESGNI 179
Query: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129
+++G +G+LG + P+ +++L+ + +A G HS ALT G ++ WG
Sbjct: 180 YAFGANGEGQLGVEGVTETNLPKQVDSLQATPWKMLAAGCDHSLALTEDGRVFVWGGNGE 359
Query: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWXXXXXXXXXXX 3189
G+LG G+++ P+ + V G V +A G + + + E F
Sbjct: 360 GQLGMGEDSDIPVPRQLDV--GQSVACIASGYYHSALVTESGELYTFGESDGGKLGLNGD 533
Query: 3190 XSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG-SDVHVRK 3248
E C PQ + +N + V + CG ++ALT+ G V+ +G+G +LG G S +
Sbjct: 534 TDE-CKTPQQVMAINDK-VKSVSCGGSHTVALTEKGEVYAFGEGSSGQLGLGVSTLESES 707
Query: 3249 PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK--PTLVQG 3306
P +++ K+ V G V++ GQ+Y +GD HG+ G + + + T V
Sbjct: 708 PSLLK--LPFKVAQVCCGENFTTVVSERGQLYTFGDGRHGKLALGQESFSNQFVCTKVDR 881
Query: 3307 LEGQKITRVACGSSHSVAWTTV-----DVATPSVHEPVLFQ--TARDPL 3348
+ + ACG H + + DVA+ E + T RD L
Sbjct: 882 FLKFNVKKAACGGCHLIVMASPKLENGDVASEDEEEGQIMMNGTIRDSL 1028
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 3/203 (1%)
Frame = +3
Query: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020
+VFVWG N + QLG + S I VP + +V +A G VT G++Y+ GE+
Sbjct: 330 RVFVWGGNGEGQLGMGEDSDIPVPRQLDV--GQSVACIASGYYHSALVTESGELYTFGES 503
Query: 3021 TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
G+LGL + P+Q+ A++ V +V GG H ALT G+V+++GEG G+L
Sbjct: 504 DGGKLGLNGDTDECKTPQQVMAINDKV---KSVSCGGSHTVALTEKGEVYAFGEGSSGQL 674
Query: 3081 G-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN-- 3137
G S + + P L++ ++ + CG + + ++ G+LYT+G G +G+L G
Sbjct: 675 GLGVSTLESESPSLLKL--PFKVAQVCCGENFTTVVSERGQLYTFGDGRHGKLALGQESF 848
Query: 3138 TTQLKPKMVKVLLGHRVIQVACG 3160
+ Q V L V + ACG
Sbjct: 849 SNQFVCTKVDRFLKFNVKKAACG 917
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 136/298 (45%), Gaps = 5/298 (1%)
Frame = +3
Query: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089
P+ ++S++H + VA G H + + G +Y++G +G+LG + + P+ ++S
Sbjct: 87 PSCVKSLKHEKARLVAC--GRSHTIVATESGNIYAFGANGEGQLGVEGVTETNLPKQVDS 260
Query: 4090 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVID 4149
L+ +AAG HS +T G ++ WG G+LG + D P+ ++ Q
Sbjct: 261 LQATPWKMLAAGCDHSLALTEDGRVFVWGGNGEGQLGMGEDSDIPVPRQLDVGQ-----S 425
Query: 4150 IAC-GSGDAQTLCLTDDDTVWSWXXXXXXX-XXXXXXXXCKVPMKIDSLTGLGVVKVECG 4207
+AC SG + +T+ ++++ CK P ++ ++ V V CG
Sbjct: 426 VACIASGYYHSALVTESGELYTFGESDGGKLGLNGDTDECKTPQQVMAINDK-VKSVSCG 602
Query: 4208 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4267
+VALT+ G VY +G+G +LG G + L KV + G +
Sbjct: 603 GSHTVALTEKGEVYAFGEGSSGQLGLGVSTLESESPSLLKLP-FKVAQVCCGENFTTVVS 779
Query: 4268 EDGEVYTWGDNDEGQLGDGT---TNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSK 4322
E G++YT+GD G+L G +N ++ L+ V + ACG H + ++ K
Sbjct: 780 ERGQLYTFGDGRHGKLALGQESFSNQFVCTKVDRFLK-FNVKKAACGGCHLIVMASPK 950
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 14/253 (5%)
Frame = +3
Query: 457 VACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVK------------IAAHSD 504
VAC ++ + +G +Y A+ ++ V+G+ N+ K +AA D
Sbjct: 129 VACGRSHTIVATESGNIY--AFGANGEGQLGVEGVTETNLPKQVDSLQATPWKMLAAGCD 302
Query: 505 GHHYLALAATGEVYSWXXXXXXXXXXXDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
H LAL G V+ W + + P+ + G+ V IA G +S
Sbjct: 303 --HSLALTEDGRVFVWGGNGEGQLGMGEDSDIPVPRQLDV------GQSVACIASGYYHS 458
Query: 565 AAITAEGELYTWGRGNYGRLG-HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
A +T GELYT+G + G+LG +G +++ P V + KV V+CG + T+A+TE
Sbjct: 459 ALVTESGELYTFGESDGGKLGLNGDTDECKTPQQVMAIND-KVKSVSCGG--SHTVALTE 629
Query: 624 NGQVWSWXXXXXXX-XXXXXXXXCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSW 682
G+V+++ ++P L+ KL V +V CG F+ +++ GQ+Y++
Sbjct: 630 KGEVYAFGEGSSGQLGLGVSTLESESPSLL-KL-PFKVAQVCCGENFTTVVSERGQLYTF 803
Query: 683 GKGDNQRLGHGTE 695
G G + +L G E
Sbjct: 804 GDGRHGKLALGQE 842
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%)
Frame = +3
Query: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
G ++ +G +YG+LG G+ + P V LK K VACG + T+ TE+G ++++
Sbjct: 15 GRVFMFGPNDYGQLGIGAQKVANRPSCVKSLKHEKARLVACGR--SHTIVATESGNIYAF 188
Query: 631 XXXXXXXXXXXXXXXCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690
PK ++ LQ + G S+ALT+DG+V+ WG +L
Sbjct: 189 GANGEGQLGVEGVTETNLPKQVDSLQATPWKMLAAGCDHSLALTEDGRVFVWGGNGEGQL 368
Query: 691 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
G G + + P+ L+ G+ V +A+G H +TE E++++G +D
Sbjct: 369 GMGEDSDIPVPRQLD--VGQSVACIASGYYHSALVTESGELYTFGESD 506
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 12/221 (5%)
Frame = +3
Query: 3945 DWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVP--------TPCEALATLRPVQLI-GG 3995
D +L+ G ++ WG N GQLG E + + VP C A + G
Sbjct: 300 DHSLALTEDGRVFVWGGNGEGQLGMGEDSDIPVPRQLDVGQSVACIASGYYHSALVTESG 479
Query: 3996 EQTLFAVTADGKXXXXXXXXXXXXXXXXXESVSTPTLLESIQHVFIKKVAVNSGGKHCLA 4055
E F + GK + TP + +I K +V+ GG H +A
Sbjct: 480 ELYTFGESDGGK----------LGLNGDTDECKTPQQVMAIND---KVKSVSCGGSHTVA 620
Query: 4056 LSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
L+ +GEVY++GE G+LG G + + P +++ +V V G + V+ G L
Sbjct: 621 LTEKGEVYAFGEGSSGQLGLGVSTLESESPSLLK--LPFKVAQVCCGENFTTVVSERGQL 794
Query: 4115 YTWGKGRYGR--LGHSDSEDQLKPKLVEALQGHRVIDIACG 4153
YT+G GR+G+ LG +Q V+ V ACG
Sbjct: 795 YTFGDGRHGKLALGQESFSNQFVCTKVDRFLKFNVKKAACG 917
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%)
Frame = +3
Query: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708
P ++ L+ V CG +I T+ G +Y++G +LG PK ++ LQ
Sbjct: 87 PSCVKSLKHEKARLVACGRSHTIVATESGNIYAFGANGEGQLGVEGVTETNLPKQVDSLQ 266
Query: 709 GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
+AAG H LALTED V WG N + Q
Sbjct: 267 ATPWKMLAAGCDHSLALTEDGRVFVWGGNGEGQ 365
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +3
Query: 4270 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321
G V+ +G ND GQLG G RP V +L+ +K VACG +HT+ + S
Sbjct: 15 GRVFMFGPNDYGQLGIGAQKVANRPSCVKSLKHEKARLVACGRSHTIVATES 170
>33148
Length = 687
Score = 88.6 bits (218), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/110 (43%), Positives = 62/110 (56%)
Frame = +3
Query: 4687 LKSVATYKGIEPSASLVQWFWEVMESFSNTERSLFLRFVWGRTRLPRTIADFRGRDFVIQ 4746
L Y +E + V++FWE M++FSN +RS FLRFV GR RLP + G+ I
Sbjct: 18 LSKTTYYDDLEETDIRVKYFWEAMKAFSNEDRSRFLRFVTGRRRLPAPLVISTGKGDTID 197
Query: 4747 VLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIHFCKSIDTD 4796
LPES TC +L LP YS +V EEKL+YA + C +IDTD
Sbjct: 198 S----------LPESSTCANMLYLPYYSSAKVAEEKLRYAAYNCIAIDTD 317
>21239
Length = 1264
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Frame = +1
Query: 4591 NEATSEEFEAMSLPFTVPSASGQDIQLSS--KHTHITLDNRAEYVRLAINYRLHE-FDEQ 4647
+E ++ + + L F +P G +I+L K +TL N EY++L I++ L E Q
Sbjct: 55 SEVLIQDIQDLGLYFHLP---GYNIELKKGGKDIPVTLHNLHEYLQLVIHWSLVEGVSRQ 225
Query: 4648 VAAVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLH---LLKSVATYKGIEPSASLVQ 4704
A REG V + L F ELE + CGS P L+++ G + V
Sbjct: 226 FEAFREGFESVFSLSSLQCFYPEELEQLFCGSQWGPWEVKMLMENCRPDHGYTHDSKAVV 405
Query: 4705 WFWEVMESFSNTERSLFLRFVWGRTRLPRTIADFRGRD----FVIQVLDKYNPPDHFLPE 4760
+ ++++ SF ++ FL+FV G RLP + FR V + + PD FLP
Sbjct: 406 FLYQLLASFDLQQQRHFLQFVTGSPRLP--VGGFRSLTPPLTIVRKTFEAGENPDDFLPS 579
Query: 4761 SYTCFFLLKLPRYSCKQVLEEKLKYA 4786
TC LKLP YS ++ KL A
Sbjct: 580 VMTCVNYLKLPDYSSIDIMRHKLHTA 657
>20162
Length = 1121
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 106/246 (43%), Gaps = 29/246 (11%)
Frame = +1
Query: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFS-----------RMNCD-KPRLIEALKTKR--- 3101
G +T ++G ++S+G + G+LGH S C+ PR + K
Sbjct: 106 GEFSTMSDINGNLYSFGCPEYGQLGHNSDGKYFVTSNKMEYKCEMTPRKVSVFIEKTRDG 285
Query: 3102 ---------IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--L 3150
IR++ACG +H+ + S L++WG G YGRLGH + +L P+++K
Sbjct: 286 HVMPITDVDIREVACGLNHTLIMDSKKRLFSWGFGGYGRLGHAEPKDELVPRLIKFFDGP 465
Query: 3151 GHRVIQVACGSRDAQTLALTDEGLVFSWXXXXXXXXXXXXSEGCNIPQNIERLNGQGVCQ 3210
G Q+ CGS T + + G ++ W E P+ ++ L+G V
Sbjct: 466 GRGGSQIQCGSSFCMT--VNEHGALYFW------GQSKPTGEATMYPKLVQDLSGWKVRS 621
Query: 3211 IECGAQFSLALTKSGVVWTWGKG-DYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGA 3267
I C + S+ L V +WG Y LG+G + Q V+ L G + VA G
Sbjct: 622 IGCCYR-SIVLCADDSVVSWGPSPTYGELGYGENKMKSSTVAQEVKPLDGVYVHDVACGY 798
Query: 3268 LHCLAV 3273
H L +
Sbjct: 799 AHTLMI 816
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 116/285 (40%), Gaps = 28/285 (9%)
Frame = +1
Query: 4060 GEVYSWGEAEDGKLGHGN-----------RSPCD-RPR----VIESLRG--------IEV 4095
G +YS+G E G+LGH + C+ PR IE R +++
Sbjct: 136 GNLYSFGCPEYGQLGHNSDGKYFVTSNKMEYKCEMTPRKVSVFIEKTRDGHVMPITDVDI 315
Query: 4096 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSG 4155
+VA G H+ + + L++WG G YGRLGH++ +D+L P+L++ G G G
Sbjct: 316 REVACGLNHTLIMDSKKRLFSWGFGGYGRLGHAEPKDELVPRLIKFFDGP-------GRG 474
Query: 4156 DAQTLCLTDDDTVWSWXXXXXXXXXXXXXXXCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215
+Q C GS F + +
Sbjct: 475 GSQIQC---------------------------------------------GSSFCMTVN 519
Query: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
+ GA+Y WG+ + + P+ VQ L G KV +I V C +D V +W
Sbjct: 520 EHGALYFWGQSK------PTGEATMYPKLVQDLSGWKVRSIGCCYRSIVLCADD-SVVSW 678
Query: 4276 GDN-DEGQLGDGTTNAIQRPRL---VAALQGKKVNRVACGSAHTL 4316
G + G+LG G N ++ + V L G V+ VACG AHTL
Sbjct: 679 GPSPTYGELGYG-ENKMKSSTVAQEVKPLDGVYVHDVACGYAHTL 810
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Frame = +1
Query: 539 PKVISAFSGKQAGKHVV--------HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
P+ +S F K HV+ +ACG ++ + ++ L++WG G YGRLGH +
Sbjct: 244 PRKVSVFIEKTRDGHVMPITDVDIREVACGLNHTLIMDSKKRLFSWGFGGYGRLGHAEPK 423
Query: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWXXXXXXXXXXXXXXXCKTPK 650
DE +P L+ G G + + V E+G ++ W PK
Sbjct: 424 DELVPRLIKFFDGPGRGGSQIQCGSSFCMTVNEHGALYFWGQSKPTGEATMY------PK 585
Query: 651 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQ-RLGHGTE--EHVRYPKLLEGL 707
L++ L V + C + SI L D V SWG LG+G + + ++ L
Sbjct: 586 LVQDLSGWKVRSIGCCYR-SIVLCADDSVVSWGPSPTYGELGYGENKMKSSTVAQEVKPL 762
Query: 708 QGKKVIDVAAGSTHCLAL----TEDSEVH 732
G V DVA G H L + TE+ + H
Sbjct: 763 DGVYVHDVACGYAHTLMIARCDTEEEKEH 849
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Frame = +1
Query: 4036 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4095
I V I++VA G H L + S+ ++SWG G+LGH PR+I+ G
Sbjct: 298 ITDVDIREVAC--GLNHTLIMDSKKRLFSWGFGGYGRLGHAEPKDELVPRLIKFFDGPGR 471
Query: 4096 --VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4153
+ G + V G LY WG+ + E + PKLV+ L G +V I C
Sbjct: 472 GGSQIQCGSSFCMTVNEHGALYFWGQSK------PTGEATMYPKLVQDLSGWKVRSIGCC 633
Query: 4154 SGDAQTLCLTDDDTVWSWXXXXXXXXXXXXXXXCK---VPMKIDSLTGLGVVKVECGSQF 4210
+++ L DD+V SW K V ++ L G+ V V CG
Sbjct: 634 ---YRSIVLCADDSVVSWGPSPTYGELGYGENKMKSSTVAQEVKPLDGVYVHDVACGYAH 804
Query: 4211 SVALTK 4216
++ + +
Sbjct: 805 TLMIAR 822
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 5/176 (2%)
Frame = +1
Query: 3053 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK--TKRIRDIACGSS 3110
V G H + ++FSWG G G+LGH + PRLI+ + I CGSS
Sbjct: 322 VACGLNHTLIMDSKKRLFSWGFGGYGRLGHAEPKDELVPRLIKFFDGPGRGGSQIQCGSS 501
Query: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
+ G LY WG + + PK+V+ L G +V + C R ++ L
Sbjct: 502 FCMTVNEHGALYFWGQSK------PTGEATMYPKLVQDLSGWKVRSIGCCYR---SIVLC 654
Query: 3171 DEGLVFSWX---XXXXXXXXXXXSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223
+ V SW + + Q ++ L+G V + CG +L + +
Sbjct: 655 ADDSVVSWGPSPTYGELGYGENKMKSSTVAQEVKPLDGVYVHDVACGYAHTLMIAR 822
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 99/261 (37%), Gaps = 29/261 (11%)
Frame = +1
Query: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS------------EDEAIPM 596
Q H H G +S G LY++G YG+LGH S + E P
Sbjct: 73 QGPPHQTHRVRGE-FSTMSDINGNLYSFGCPEYGQLGHNSDGKYFVTSNKMEYKCEMTPR 249
Query: 597 LVA------------GLKGLKVIDVACGSGDAQTLAVTENGQVWSWXXXXXXXXXXXXXX 644
V+ + + + +VACG TL + +++SW
Sbjct: 250 KVSVFIEKTRDGHVMPITDVDIREVACGLN--HTLIMDSKKRLFSWGFGGYGRLGHAEPK 423
Query: 645 XCKTPKLIEKLQ--DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
P+LI+ +++CGS F + + + G +Y WG+ T E YPK
Sbjct: 424 DELVPRLIKFFDGPGRGGSQIQCGSSFCMTVNEHGALYFWGQSKP------TGEATMYPK 585
Query: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG---SNDQCQHFDTLRVTKPEPTALPGL 759
L++ L G KV + + L D V SWG + + + + + + L
Sbjct: 586 LVQDLSGWKVRSIGC-CYRSIVLCADDSVVSWGPSPTYGELGYGENKMKSSTVAQEVKPL 762
Query: 760 DSKHIVGIACGPAQSFAWSSC 780
D ++ +ACG A + + C
Sbjct: 763 DGVYVHDVACGYAHTLMIARC 825
>13725
Length = 700
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Frame = +2
Query: 4470 VKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLL--NPATR 4527
VKF GE D GG E + E+ N L + D Y L NP +
Sbjct: 143 VKFHGEEGLDYGGVAREWFYLLSHEMLNPYYGLF---------QYSREDIYTLQINPDSG 295
Query: 4528 A-PVHCSMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4586
P H S F F+G ++G+AI G L P +KQL G T+ DL VD D L
Sbjct: 296 VNPEHLSYFHFVGRVIGMAIFHGHYLDGGFTMPFYKQLLGKPATLEDLESVDPDLHRSLC 475
Query: 4587 YIRDNEATSEEFEAMSLPFTVPSAS-GQ----DIQLSSKHTHITLDNRAEYVRLAINYRL 4641
++ +N + + F+V S G+ +++ T +T DN+ EYVRL +++RL
Sbjct: 476 WMLENNIEN----VLEHTFSVEHNSFGKLREYELKPGGNDTKVTEDNKHEYVRLYVHWRL 643
>38263
Length = 368
Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +2
Query: 2702 SIHPGVTCDGCQTFPINGSRFKCRNCDDFDFCETCFKTKKHNTRHT 2747
S H GV+CD C G R+KC C D+D C TC++ TRHT
Sbjct: 188 SRHEGVSCDSCLKGNFRGRRYKCLICYDYDLCATCYEAGATTTRHT 325
>03352
Length = 935
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Frame = +2
Query: 3153 RVIQVACGSRDAQTLALTDEGLV-FSWXXXXXXXXXXXXSEGCNIPQNIE-----RLNGQ 3206
++ QVA G A L L D+G V F ++G P++++ R+ +
Sbjct: 35 KIQQVATGHEGAHALMLADDGSVFFVGLAKRGEDGDSGAAKGRRQPKSVKPKKMIRVENK 214
Query: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
V + C + S +TK G V+ +GK D H S HV L+ + VA+G
Sbjct: 215 QVVFVACNSGSSAVVTKDGEVYMFGK-DTSHCDHASG-HVTD------LKDVVVTQVALG 370
Query: 3267 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPT 3302
H +A+T GQ++ +G N+ GQ G T V + T
Sbjct: 371 KAHTVALTSKGQLFTFGINNKGQCGRDFTQVGVRET 478
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Frame = +2
Query: 3048 VKKVAVHSGGRHATALTVDGKVFSWG------EGDDGKLGHFSRMNCDKPRLIEALKTKR 3101
+++VA G HA L DG VF G +GD G + KP+ + ++ K+
Sbjct: 38 IQQVATGHEGAHALMLADDGSVFFVGLAKRGEDGDSGAAKGRRQPKSVKPKKMIRVENKQ 217
Query: 3102 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 3161
+ +AC S SA +T GE+Y +G H D+ + + V+ V QVA G
Sbjct: 218 VVFVACNSGSSAVVTKDGEVYMFGK----DTSHCDHASGHVTDLKDVV----VTQVALGK 373
Query: 3162 RDAQTLALTDEGLVFSW 3178
A T+ALT +G +F++
Sbjct: 374 --AHTVALTSKGQLFTF 418
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%)
Frame = +2
Query: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708
PK + ++++ V+ V C S S +TKDG+VY +GK D H + + L+
Sbjct: 185 PKKMIRVENKQVVFVACNSGSSAVVTKDGEVYMFGK-DTSHCDHASGH-------VTDLK 340
Query: 709 GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
V VA G H +ALT ++ ++G N++ Q
Sbjct: 341 DVVVTQVALGKAHTVALTSKGQLFTFGINNKGQ 439
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Frame = +2
Query: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWXXXXXXXXXXXDTVP-LEEPKVISAFSG-KQA 550
S I ++A +G H L LA G V+ +PK + +
Sbjct: 29 SPKIQQVATGHEGAHALMLADDGSVFFVGLAKRGEDGDSGAAKGRRQPKSVKPKKMIRVE 208
Query: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
K VV +AC S SA +T +GE+Y +G+ + H S V LK + V VA
Sbjct: 209 NKQVVFVACNSGSSAVVTKDGEVYMFGK-DTSHCDHASGH-------VTDLKDVVVTQVA 364
Query: 611 CGSGDAQTLAVTENGQVWSW 630
G A T+A+T GQ++++
Sbjct: 365 LGK--AHTVALTSKGQLFTF 418
Score = 35.4 bits (80), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%)
Frame = +2
Query: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC 4266
GS F V L K G G R +P+++ ++ K+V+ +A S
Sbjct: 95 GSVFFVGLAKRGEDGDSGAAKGRR-----QPKSVKPKKMIRVENKQVVFVACNSGSSAVV 259
Query: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWST 4320
T+DGEVY +G + T++ V L+ V +VA G AHT+A ++
Sbjct: 260 TKDGEVYMFGKD--------TSHCDHASGHVTDLKDVVVTQVALGKAHTVALTS 397
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNRKPTLVQG 3306
KP+ + + K++V VA + VT G+VY +G D H +G T
Sbjct: 182 KPKKMIRVENKQVVFVACNSGSSAVVTKDGEVYMFGKDTSHCDHASGHVT---------D 334
Query: 3307 LEGQKITRVACGSSHSVAWTT 3327
L+ +T+VA G +H+VA T+
Sbjct: 335 LKDVVVTQVALGKAHTVALTS 397
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 6/146 (4%)
Frame = +2
Query: 4093 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED------QLKPKLVEALQGHR 4146
I+ V GAH+ + G ++ G + G G S + +KPK + ++ +
Sbjct: 38 IQQVATGHEGAHALMLADDGSVFFVGLAKRGEDGDSGAAKGRRQPKSVKPKKMIRVENKQ 217
Query: 4147 VIDIACGSGDAQTLCLTDDDTVWSWXXXXXXXXXXXXXXXCKVPMKIDSLTGLGVVKVEC 4206
V+ +AC SG + +T D V+ + + L + V +V
Sbjct: 218 VVFVACNSGSSAV--VTKDGEVYMFGKDTSHCDHASG--------HVTDLKDVVVTQVAL 367
Query: 4207 GSQFSVALTKSGAVYTWGKGDYHRLG 4232
G +VALT G ++T+G + + G
Sbjct: 368 GKAHTVALTSKGQLFTFGINNKGQCG 445
>19738
Length = 375
Score = 41.2 bits (95), Expect(2) = 3e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +2
Query: 4612 GQDIQLSSKHTHITLDNRAEYVRLAINYRLHEFDEQVAAVREGMARVVPVPLLSLFTGYE 4671
G +I++++K+ LD A+Y RLA + + E+V + G+ ++P LLS+F YE
Sbjct: 23 GGNIRVTNKNKLSYLDCLAQY-RLATSVK-----EEVESFLRGLNELIPDNLLSIFDEYE 184
Query: 4672 LETMVCG 4678
LE ++CG
Sbjct: 185 LELLMCG 205
Score = 27.7 bits (60), Expect(2) = 3e-05, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 4702 LVQWFWEVMESFSNTERSLFLRFVWGRTRLP 4732
++ WFW V+ SF+ + + L+F G ++LP
Sbjct: 277 VLDWFWTVIASFTEEQMARLLQFTTGCSQLP 369
>39525
Length = 450
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Frame = -3
Query: 4242 PRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDNDEGQLG 4284
P ++ L+G KV IA+G + HCV T++G+VYTWG N++GQLG
Sbjct: 193 PHRMAALEGIKVRTIASGCNACHCVAITDEGKVYTWGRNEKGQLG 59
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 3249 PQVVEGLRGKKIVHVAVG--ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKP 3301
P + L G K+ +A G A HC+A+TD G+VY WG N+ GQ G T P
Sbjct: 193 PHRMAALEGIKVRTIASGCNACHCVAITDEGKVYTWGRNEKGQLGLSDTVRRDAP 29
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 30/46 (65%)
Frame = -3
Query: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
+P + +++ + ++ +A HC+A++ EG+VY+WG E G+LG
Sbjct: 196 SPHRMAALEGIKVRTIASGCNACHCVAITDEGKVYTWGRNEKGQLG 59
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 3091 PRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP 3143
P + AL+ ++R IA C + H A+T G++YTWG E G+LG D + P
Sbjct: 193 PHRMAALEGIKVRTIASGCNACHCVAITDEGKVYTWGRNEKGQLGLSDTVRRDAP 29
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = -3
Query: 701 PKLLEGLQGKKVIDVAAG--STHCLALTEDSEVHSWGSNDQCQ--HFDTLRVTKP 751
P + L+G KV +A+G + HC+A+T++ +V++WG N++ Q DT+R P
Sbjct: 193 PHRMAALEGIKVRTIASGCNACHCVAITDEGKVYTWGRNEKGQLGLSDTVRRDAP 29
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -3
Query: 4084 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDS 4130
P + +L GI+V +A+G H +T G +YTWG+ G+LG SD+
Sbjct: 193 PHRMAALEGIKVRTIASGCNACHCVAITDEGKVYTWGRNEKGQLGLSDT 47
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -3
Query: 3037 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091
P ++ AL V+ +A H A+T +GKV++WG + G+LG + D P
Sbjct: 193 PHRMAALEGIKVRTIASGCNACHCVAITDEGKVYTWGRNEKGQLGLSDTVRRDAP 29
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG 585
L P ++A G + + C + + AIT EG++YTWGR G+LG
Sbjct: 202 LWSPHRMAALEGIKV--RTIASGCNACHCVAITDEGKVYTWGRNEKGQLG 59
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -3
Query: 4190 PMKIDSLTGLGVVKVE--CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4241
P ++ +L G+ V + C + VA+T G VYTWG+ + +LG D VRR
Sbjct: 193 PHRMAALEGIKVRTIASGCNACHCVAITDEGKVYTWGRNEKGQLGLS--DTVRR 38
>12101
Length = 1020
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = -2
Query: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
+P I+ +GK V ++ACG S IT +G+LY+WG G+ +LG G +DE +P+
Sbjct: 644 KPTAITQLNGK-----VNYVACGEACSFXITNDGKLYSWGMGSLLQLGVGDGDDEVVPVE 480
Query: 598 VA 599
V+
Sbjct: 479 VS 474
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Frame = -2
Query: 3048 VKKVAVHSGGRHAT-ALTVDGKVFSWGEGDDGKLGHFSRMNC-DKPRLIEALKTKRIRDI 3105
+K V +GG+H T L + + + G + G+LG KP I L K + +
Sbjct: 776 IKDVKQIAGGQHHTLILDNNMRCLAVGRPEYGRLGLGKVTEVVTKPTAITQLNGK-VNYV 600
Query: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV--------KVLLG-----H 3152
ACG + S +T+ G+LY+WG+G +LG GD ++ P V KVLL H
Sbjct: 599 ACGEACSFXITNDGKLYSWGMGSLLQLGVGDGDDEVVPVEVSSKNTQNKKVLLADGGGQH 420
Query: 3153 RVIQVACGSRDAQ 3165
V V ++AQ
Sbjct: 419 SVFLVEADVQEAQ 381
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Frame = -2
Query: 2944 LIRKKTPGLESTATIRTKVF--------VW--GLNDKDQLGGLKGS-KIKVPSFSETLSA 2992
LI K+T +ES F +W GLN+ QL K + + P +E
Sbjct: 944 LIIKRTKPIESIWATNYCTFMRESQTQTIWAVGLNNYKQLAHPKETERFLTPVKTEIK-- 771
Query: 2993 LNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA 3052
+V Q+AGG + + + G GRLGLG + V P IT L+ V
Sbjct: 770 -DVKQIAGGQHHTLILDNNMRCLAVGRPEYGRLGLGKVTEVVTKPTAITQLNGKV---NY 603
Query: 3053 VHSGGRHATALTVDGKVFSWGEGDDGKLG 3081
V G + +T DGK++SWG G +LG
Sbjct: 602 VACGEACSFXITNDGKLYSWGMGSLLQLG 516
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -2
Query: 4190 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV--QG 4247
P I L G V V CG S +T G +Y+WG G +LG G D P +V +
Sbjct: 641 PTAITQLNGK-VNYVACGEACSFXITNDGKLYSWGMGSLLQLGVGDGDDEVVPVEVSSKN 465
Query: 4248 LQGKKVIAIATGSLHCVCCTE 4268
Q KKV+ G H V E
Sbjct: 464 TQNKKVLLADGGGQHSVFLVE 402
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -2
Query: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRL--GHGTEEHVRYPKLLEGLQGKKVIDVAAGST 720
V CG S +T DG++YSWG G +L G G +E V + Q KKV+ G
Sbjct: 602 VACGEACSFXITNDGKLYSWGMGSLLQLGVGDGDDEVVPVEVSSKNTQNKKVLLADGGGQ 423
Query: 721 HCLALTE 727
H + L E
Sbjct: 422 HSVFLVE 402
Score = 38.5 bits (88), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -2
Query: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS-SEDEAIPMLVAGLKGLKVIDVA 610
K V IA G ++ + GR YGRLG G +E P + L G KV VA
Sbjct: 773 KDVKQIAGGQHHTLILDNNMRCLAVGRPEYGRLGLGKVTEVVTKPTAITQLNG-KVNYVA 597
Query: 611 CGSGDAQTLAVTENGQVWSW 630
C G+A + +T +G+++SW
Sbjct: 596 C--GEACSFXITNDGKLYSW 543
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = -2
Query: 4201 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS-DDHVRRPRQVQGLQGKKVIAIATG 4259
V ++ G ++ L + G+ +Y RLG G + V +P + L GK V +A G
Sbjct: 767 VKQIAGGQHHTLILDNNMRCLAVGRPEYGRLGLGKVTEVVTKPTAITQLNGK-VNYVACG 591
Query: 4260 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQGKKVNRVACGSAHTL 4316
T DG++Y+WG QLG G + P V++ Q KKV G H++
Sbjct: 590 EACSFXITNDGKLYSWGMGSLLQLGVGDGDDEVVPVEVSSKNTQNKKVLLADGGGQHSV 414
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 3197 PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3241
P I +LNG+ V + CG S +T G +++WG G +LG G
Sbjct: 641 PTAITQLNGK-VNYVACGEACSFXITNDGKLYSWGMGSLLQLGVG 510
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 4251 KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG-TTNAIQRPRLVAALQGKKVNRVA 4309
K V IA G H + + G + G+LG G T + +P + L GK VN VA
Sbjct: 773 KDVKQIAGGQHHTLILDNNMRCLAVGRPEYGRLGLGKVTEVVTKPTAITQLNGK-VNYVA 597
Query: 4310 CGSA 4313
CG A
Sbjct: 596 CGEA 585
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = -2
Query: 2978 GSKIKVPSFSETLSALN--VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVP 3035
G +V + ++ LN V VA G F +T +GK+YS G + +LG+G V
Sbjct: 668 GKVTEVVTKPTAITQLNGKVNYVACGEACSFXITNDGKLYSWGMGSLLQLGVGDGDDEV- 492
Query: 3036 IPRQITALSSYVVKKVAVHSGGRHATAL 3063
+P ++++ ++ K + GG+H+ L
Sbjct: 491 VPVEVSSKNTQNKKVLLADGGGQHSVFL 408
>33425
Length = 477
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = -3
Query: 3278 QVYAWGDNDHGQQGNGTTTVNRKPTLVQ--GLEGQKITRVACGSSHSVAWTTV 3328
+VYAWG+N GQ G G+ P + GLEG + ++A G+SHSV WT +
Sbjct: 466 EVYAWGNNAMGQCGQGSLPEPHLPPTARWWGLEGVPVQQIAAGTSHSVVWTAM 308
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 4268 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA--ALQGKKVNRVACGSAHTLAWS 4319
D EVY WG+N GQ G G+ P L+G V ++A G++H++ W+
Sbjct: 475 HDNEVYAWGNNAMGQCGQGSLPEPHLPPTARWWGLEGVPVQQIAAGTSHSVVWT 314
Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Frame = -3
Query: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEPTALP-----GLDSKHIVGIACGPAQSFAWSS 779
D+EV++WG+N QC + + PEP P GL+ + IA G + S W++
Sbjct: 475 HDNEVYAWGNNAMGQCG-----QGSLPEPHLPPTARWWGLEGVPVQQIAAGTSHSVVWTA 311
Query: 780 --CSEWSIGLRVPFVVDICSMTFEQLDLLLRQVSEGMDGTADWPPP 823
I PF VD+ TF L L + +G D PPP
Sbjct: 310 MPSDRHVIAWHRPFCVDLQEATFASLCSFLERYCDGFYA-EDPPPP 176
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = -3
Query: 675 KDGQVYSWGKGDNQRLGHGT--EEHVRYPKLLEGLQGKKVIDVAAGSTHCL---ALTEDS 729
D +VY+WG + G G+ E H+ GL+G V +AAG++H + A+ D
Sbjct: 475 HDNEVYAWGNNAMGQCGQGSLPEPHLPPTARWWGLEGVPVQQIAAGTSHSVVWTAMPSDR 296
Query: 730 EVHSW 734
V +W
Sbjct: 295 HVIAW 281
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 4059 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIEVVDVAAGGAHSACVTA 4110
+ EVY+WG G+ G G+ P L G+ V +AAG +HS TA
Sbjct: 472 DNEVYAWGNNAMGQCGQGSLPEPHLPPTARWWGLEGVPVQQIAAGTSHSVVWTA 311
>14299
Length = 716
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +3
Query: 2702 SIHPGVTCDGCQTFPINGSRFKCRNCDDFDFCETCFKTKKHNTRHT 2747
S H GV+CD C G R+KC C D+D C TC++ TRHT
Sbjct: 249 SRHEGVSCDSCLKGNFRGRRYKCLICYDYDLCATCYEAGATTTRHT 386
>07471
Length = 1673
Score = 44.3 bits (103), Expect = 0.001, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = -3
Query: 2662 VTHQSVGLVKAFS--ANGKDIIVDFPQQSHWTGLLSEMELVPSIHPGVTCDGCQTFPING 2719
V ++ VK+FS ++G D P S G+ +H + CD C I G
Sbjct: 1554 VAKKTAKYVKSFSKKSDGSDGQDSQPSVSSKXGV---------VHEDIICDCCNG-EIVG 1405
Query: 2720 SRFKCRNCDDFDFCETC--FKTKKHNTRHTFGRINEP 2754
+R+ C NC ++D CE C + H+ H F ++ P
Sbjct: 1404 TRYICGNCPNYDLCEACENIQPSFHDRSHVFIKLRRP 1294
>01993
Length = 1915
Score = 37.4 bits (85), Expect = 0.14, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 38/95 (40%)
Frame = -2
Query: 1179 KERDDHEELAWPGIMESFFTGQNCRNNEEVTLIRKADLENHNKDGGFWTVIDGKVYGIKD 1238
KER + A IM S EV + R +++ H W +ID KVY +
Sbjct: 1857 KERSQKQREAATRIMAS---------KVEVKVYRAEEVKQHKDSKSTWFIIDNKVYDVTK 1705
Query: 1239 FQTQSLTGNSILAQFAGEDPVVALEAALQFEDTQE 1273
F + G ++ + AG D A E D ++
Sbjct: 1704 FLDEHPGGEEVMLEQAGGDATQAFEDVGHSSDARD 1600
>01451
Length = 1229
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -3
Query: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
V+ IA+GS H C T+ GE+YT G ++GQLG
Sbjct: 1155 VVKIASGSDHIACLTDLGELYTLGCAEQGQLG 1060
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -3
Query: 4087 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
IE L VV +A+G H AC+T G+LYT G G+LG
Sbjct: 1179 IEVLPDAVVVKIASGSDHIACLTDLGELYTLGCAEQGQLG 1060
>11020
Length = 910
Score = 35.0 bits (79), Expect = 0.69, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Frame = +3
Query: 1885 QDGPPPGLG---RVIGELGEDGWIRVQWDTGST-NSYRMGKEGKYDLKLV 1930
+DG PPGLG RV +L D ++ V+WD G+ ++ MG + Y+L+ V
Sbjct: 621 KDGSPPGLGTVTRVNDDLTTD-FVAVKWDCGNYHDNIYMGFDNTYELRFV 767
>31200
Length = 445
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +3
Query: 579 GNYGRLGHGSSEDEAIPMLVA--GLKGLKVIDVACGSGDAQTLAVTENGQVWSWXXXXXX 636
G +GRLGH +DE +P L+ +G V CGS +L + E G ++ +
Sbjct: 6 GGFGRLGHAEPKDEMVPRLMKFYDTQGRGGRSVYCGS--TFSLIINELGLLYLFGQNKKT 179
Query: 637 XXXXXXXXXCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
PK ++ L ++ + C + SI ++ D + +WG
Sbjct: 180 GEANMY------PKPVQDLSGWNITSIGCANT-SIMISADDTLIAWG 299
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Frame = +3
Query: 3126 LGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWXXXXX 3183
G +GRLGH + ++ P+++K G V CGS +L + + GL++
Sbjct: 3 FGGFGRLGHAEPKDEMVPRLMKFYDTQGRGGRSVYCGS--TFSLIINELGLLY------L 158
Query: 3184 XXXXXXXSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSD 3243
E P+ ++ L+G + I C A S+ ++ + WG F G
Sbjct: 159 FGQNKKTGEANMYPKPVQDLSGWNITSIGC-ANTSIMISADDTLIAWGASPTFW*AWGIG 335
Query: 3244 VHVRKPQVVEGLRG 3257
P+VV+G +G
Sbjct: 336 ---*VPEVVDGAQG 368
>37466
Length = 593
Score = 33.9 bits (76), Expect = 1.5, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 2709 CDGCQTFPINGSRFKCRNCDDFDFCETCFKTKKHNTR 2745
C+ C+ +R+ C C+DFD C +C+K H +
Sbjct: 498 CNNCKAHV--ETRYHCVVCEDFDLCVSCYKRDGHQHK 394
>13682
Length = 639
Score = 33.5 bits (75), Expect = 2.2, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -2
Query: 2122 STLRKRRARPQASLTATHSSTLAEEVVGLLRTLHSLTQWNGLI 2164
STL R +P SL THS LA V+ L +LHS + ++ L+
Sbjct: 500 STLAFRIPKPTVSLLQTHSKRLATLVIASLPSLHSTSTFSSLL 372
>03889
Length = 1343
Score = 33.1 bits (74), Expect = 2.9, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 442 GPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT 475
GP+QC L V+ C E F++L N ++YT
Sbjct: 847 GPVQCSKWPPLLVISFLCFEVDFIVLVHNNKIYT 746
>31463
Length = 495
Score = 32.3 bits (72), Expect = 4.4, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 4758 LPESYTCFFLLKLPRYSCKQVLEEKLKYAI 4787
LP + TC LLKLP + ++ L KL YAI
Sbjct: 22 LPTASTCMNLLKLPEFKDEKTLRTKLLYAI 111
>08616
Length = 2833
Score = 31.6 bits (70), Expect = 8.7, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 647 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYS-WGKGDNQRLGHGTEEHVRY 700
K+PK ++K QD +K RC S + L ++S + K + ++ HG H R+
Sbjct: 2327 KSPKQVKKSQDK*SVKTRCSSGTNTTLRAAMSLFSIYHKDQSFQILHGRRRHARF 2163
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|94369706|ref|XP_131051.5| PREDICTED: sorting nexin
family member 27 [Mus musculus]
(530 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07991 455 e-128
03831 58 1e-08
20073 52 8e-07
08480 39 0.004
38751 37 0.019
12345 34 0.14
01502 33 0.24
02951 33 0.32
29705 31 1.3
05997 30 3.3
18014 29 6.1
>07991
Length = 1800
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 207/381 (54%), Positives = 286/381 (75%)
Frame = +3
Query: 141 LDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVVYNVYMAGRQLCSKRYREFAI 200
L+PSDDS G S+ DY+E++++PISVP Y++++ +KFVV+N+YMAGR LCS+RYREF
Sbjct: 84 LEPSDDSSGPSYIDYSERRSLPISVPDYQNMDSGADKFVVFNIYMAGRHLCSRRYREFDN 263
Query: 201 LHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFL 260
LHQNLKREF +FTFP+LPGK F LSEQQLD RRRGLE+YLEKVC++RVIGESD+MQ+FL
Sbjct: 264 LHQNLKREFPDFTFPKLPGKKIFHLSEQQLDHRRRGLEQYLEKVCAVRVIGESDVMQDFL 443
Query: 261 SESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQVYQAIAAKVGMDSTTVNYFALFE 320
+ +D +G +VEL+V LPD V + ++ D VY+A+A KVG+ +YF LFE
Sbjct: 444 AAADLEDDG--EVELKVLLPDHNICVVTIHRSDNADTVYKAVAXKVGL-GDAADYFYLFE 614
Query: 321 VINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEVLLNDNDLAVTYFFH 380
+ H+F R+L P+E PH +Y+QNY++A TCLT+++WLF+ E E LN N A+ + F
Sbjct: 615 TVEHNFERRLQPHELPHNIYIQNYSTAT-ATCLTLKRWLFSLEREATLNSNPQALXFLFG 791
Query: 381 QAVDDVKKGYIKAEEKSYQLQKLHEQRKMVMYLNMLRTCEGYNEIIFPHCACDSRRKGHV 440
QA +DV +G +K +K Y+L+ L EQ K++ +L ++R +GY +++FPHCACDSRR GHV
Sbjct: 792 QAAEDVTRGLLKVGDKLYELKALKEQEKIIEFLKIVRHLDGYGDLMFPHCACDSRRDGHV 971
Query: 441 ITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEKKPRWVKI 500
I IS+ FKL AC E+G E QVI F W +++ ++ DEEGM+F FEY R KKPR VKI
Sbjct: 972 IAIISLQSFKLQACKEDGTTEAQVIEFVWKDVKSYEVDEEGMSFNFEYDRPGKKPRVVKI 1151
Query: 501 FTPYFNYMHECFERVFCELKW 521
FTPYF +M++CF+R++ E++W
Sbjct: 1152FTPYFFFMNDCFDRIYQEMEW 1214
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 26/53 (49%)
Frame = +1
Query: 113 KQVVDLIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISV 165
KQVVD IR+G L LTV+SVP D L S+ +QA P S
Sbjct: 1 KQVVDYIRSGGDTLTLTVISVP-----------DQLAASWSRVMTRQAHPTST 126
>03831
Length = 1143
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +3
Query: 39 PRVVRIVKSE--SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKG 96
PR+ IV+ +GYGFN+ + + GQ + V G A+ AG++ G
Sbjct: 129 PRLCHIVRWSDFNGYGFNLHAEKGKAGQF-------------IGKVDEGSPAEAAGLKAG 269
Query: 97 DRILEVNGVNVEGATHKQVVDLIRAGEKELILTVL 131
DRI+EVNG N+ H+QVV I+AG E L V+
Sbjct: 270 DRIVEVNGTNIGNENHQQVVGRIKAGGDETRLLVV 374
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = +3
Query: 39 PRVVRIVK--SESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKG 96
PR+ + K GYGFN ++ E P Q++ +V P A+ G+++G
Sbjct: 576 PRLCHLCKWADFDGYGFN-------------LHAEKDKPGQYIGSVDPNSPAETGGLKEG 716
Query: 97 DRILEVNGVNVEGATHKQVVDLIRA-GEKELILTV 130
DRI+EVNG N+E H V+ I++ G+K +L V
Sbjct: 717 DRIIEVNGENIETTNHTAVIQNIKSRGDKTSMLVV 821
>20073
Length = 582
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 50 GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVE 108
G GFNV G E +P+ ++S ++PGG ADR +++GD++L VNGV+VE
Sbjct: 3 GLGFNVMG-----------GKEQSSPI-YISRIIPGGVADRLNCLKRGDQLLSVNGVSVE 146
Query: 109 GATHKQVVDLIRAGEKELILTVLSVP 134
G H++ V+L++ + + L V P
Sbjct: 147 GEYHEKAVELLKLAQGSVRLVVRYTP 224
>08480
Length = 698
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = -1
Query: 86 GAADRAG-VRKGDRILEVNGVNVEGATHKQVVD-LIRAGE 123
G AD +G +R+GD+IL VN V+VE ATH+Q L RAG+
Sbjct: 698 GPADLSGDLRRGDKILSVNDVDVERATHEQAAQALKRAGD 579
>38751
Length = 329
Score = 37.0 bits (84), Expect = 0.019, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +3
Query: 70 GELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILT 129
G+ Y V + G A++ G+ GDRIL+VNG + TH + V ++R +I+T
Sbjct: 18 GKEYGTPIVVYVIEEGCQAEQQGLNIGDRILDVNGTDFTHLTHAEAVTIMRNAWN-VIMT 194
Query: 130 VLSVPPHEADNLDPSDDSLGQSF 152
V P SD GQ +
Sbjct: 195 VQPCP--------ESDSGQGQQY 239
>12345
Length = 933
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +3
Query: 193 KRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGE 252
+RY +F L++ + F P+LP K + + ++ R++ L+ ++ + I E
Sbjct: 300 RRYNDFVALYEMVMMRFPYRILPKLPPKKMLGANREFIEQRKKSLKRFINIIARHPQINE 479
Query: 253 SDIMQEFLSES--------DENYNGVSD 272
+++ FL+ S E + G+ D
Sbjct: 480 DKLLKFFLTYSGNDMQHKIKEQFRGIPD 563
>01502
Length = 1949
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 78 HVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVL 131
+V+ + A R G++ D+IL++NG + THKQ V+ IR K+ +L +L
Sbjct: 40 YVTFIYENSPAARCGLQLHDKILQLNGKDFTVVTHKQAVENIR---KKPVLKML 192
>02951
Length = 1076
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +2
Query: 78 HVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVL 131
+V+ + A R G++ D+IL++NG + THKQ V+ IR K+ +L +L
Sbjct: 26 YVTFIYENSPAARCGLQLHDKILQLNGKDFTVVTHKQAVENIR---KKPVLKML 178
>29705
Length = 674
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = -1
Query: 79 VSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTV 130
++ V+ GG+A++ G + DR+L VN N+E TH++ V +++ + LT+
Sbjct: 353 ITKVIEGGSAEQDGRIAVMDRLLAVNEHNLEDVTHEEAVAALKSTGDVVRLTI 195
>05997
Length = 807
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 319 FEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTT---EEEVLLND 370
F + NH RKL NE + Y+Q++T V C+ +K LF EE V++ D
Sbjct: 641 FYLFNHIMTRKLL*NECNYFNYIQSHTKKVL-LCMNKKKILFIQSHYEESVIMCD 802
>18014
Length = 469
Score = 28.9 bits (63), Expect = 6.1, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 392 KAEEKSYQLQKLHEQRKMVMYLNMLRTCEGYN-EIIFPHCACDSRRKGHVITAISITHF 449
K+++ ++Q + + ++M L RTC N FP C CD + H I + + +F
Sbjct: 71 KSKQIAFQ*TRNSKSQRMHKLLKKSRTCPKNNLSF*FPFCVCDKFKTLHNIHYVLVGYF 247
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|163310776|ref|NP_033810.2| adaptor-related protein
complex 3, beta 1 subunit [Mus musculus]
(1105 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
31995 388 e-127
06708 177 2e-44
18633 50 4e-06
>31995
Length = 1263
Score = 388 bits (997), Expect(2) = e-127, Method: Compositional matrix adjust.
Identities = 195/263 (74%), Positives = 227/263 (86%)
Frame = -2
Query: 340 LVRLLRSNREVQYIVLQNIATMSIERKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLAN 399
L+RLLRS++E+QY+VL ++ATM+ +RKGMFEPYLKSFYVRS+DP IK LKLEILTNLA
Sbjct: 1262 LIRLLRSHQEIQYVVLSDVATMTTKRKGMFEPYLKSFYVRSSDPLHIKLLKLEILTNLAT 1083
Query: 400 EANISTLLREFQTYVRSQDKQFAAATIQTIGRCATSISEVTDTCLNGLVCLLSNRDEIVV 459
E NIST+LREFQTYV S DK+FAAATIQ IGRCA+SI EVTDTCLNGLV L+SNRBE VV
Sbjct: 1082 ETNISTILREFQTYVTSSDKEFAAATIQAIGRCASSICEVTDTCLNGLVHLMSNRBEAVV 903
Query: 460 AESVVVIKKLLQMQPAQHGEIIRHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVL 519
AESVVVIKKLLQM+P +H II HMA+++D ITVP+ARASILWLIGE ERVPKIAPDVL
Sbjct: 902 AESVVVIKKLLQMRPNEHKGIICHMARMVDKITVPMARASILWLIGEYSERVPKIAPDVL 723
Query: 520 RKMAKSFTSEDDLVKLQILNLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIR 579
RK+AKSFTSE+D+VKLQ+LNLA KL +TN KQTKLL QY+LNL KYDQNYDIRDR+RF+R
Sbjct: 722 RKLAKSFTSEEDIVKLQVLNLATKLCITNPKQTKLLCQYVLNLAKYDQNYDIRDRSRFLR 543
Query: 580 QLIVPNEKSGALSKYAKKIFLAP 602
Q+++P E SKYAK+ P
Sbjct: 542 QMVLPGENGCVFSKYAKRCSWPP 474
Score = 86.7 bits (213), Expect(2) = e-127, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Frame = -3
Query: 605 APLLESPFKDRDRFQLGTLSHTLNIKASGYLELSNWPEVAPDPSVRNVEVIESAKEWTPL 664
AP+L S FKDRD FQLGTLSH LN++ +GY EL WPE APDPSVRNVE+ E
Sbjct: 469 APVLASKFKDRDFFQLGTLSHVLNMRTTGYQELPEWPEAAPDPSVRNVELPPVWTEKPSK 290
Query: 665 GKTKKEKPMKKFY 677
TKK++ +K FY
Sbjct: 289 VSTKKKQDLKSFY 251
>06708
Length = 980
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 147/237 (62%)
Frame = +1
Query: 866 SSVINVSTPVFVPTKTHELLHRMHGKGLAAHYCFPRQPCIFSDKMVSVQITLTNTSDRKI 925
++V N+ + V +K+HELL+R+ G GL+ Y F R +FS KMVS++ TL N D +
Sbjct: 151 ATVTNIVQGITVSSKSHELLNRISGSGLSISYKFTRTISVFSPKMVSIEWTLINNGDTPL 330
Query: 926 ENIHIGGKGLPVGMQMHAFHPIDSLEPKGSVTVSVGIDFCDSTQTASFQLCTKDDCFNVT 985
+I +G + GM++ F I SL S +V +GI+F D+TQ A+ +C + F V+
Sbjct: 331 TSIKLGDTKVQPGMEVQPFPEIASLGVGASTSVLMGINFNDTTQPAAMDVCVGEHKFKVS 510
Query: 986 LQPPVGELLSPVAMSEKDFKKEQGTLTGMNETSATLIAAPQNFTPSMILQKVVNVANLGA 1045
+ PVGELL P MSE DF +QG L GMNE SA++ + + I V+ NL
Sbjct: 511 ITAPVGELLQPHTMSEGDFTLQQGKLGGMNENSASVAIDEETGSAKAICTSVLTAGNLLQ 690
Query: 1046 VPSSQDNVHRFAARTVHSGSLMLVTVELKEGSTAQLIINTEKTVIGSVLLRELKPVL 1102
VPSS +N+ RFAA+T+ SG+L+LVTV+ E A++ +N+EK VI ++LL++++ +
Sbjct: 691 VPSSDENIFRFAAKTLASGTLVLVTVKTSE-KKAKVTVNSEKMVICAMLLKDVQKAM 858
>18633
Length = 404
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = +2
Query: 77 SELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRAL 124
S LF VV + ++N+E+KKLVY+YL+ YA+ Q D A++S++TF + +
Sbjct: 161 SALFTDVVNCMQTENLELKKLVYLYLMNYAKSQSDTAIISVNTFVKVI 304
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|28395018|ref|NP_034723.1| junction plakoglobin [Mus
musculus]
(745 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14657 450 e-126
15086 271 7e-73
38361 98 8e-23
12505 91 1e-18
17600 82 9e-16
12579 42 9e-04
36452 39 0.005
22653 32 0.64
36960 32 1.1
02294 30 4.5
>14657
Length = 918
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/296 (74%), Positives = 258/296 (87%), Gaps = 2/296 (0%)
Frame = -3
Query: 103 ATQVE-GQTTNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTK 161
+TQV + T +QRL+EPSQ+LK A+V+LINYQDDA+LATRA+PEL KLL DED VVV +
Sbjct: 889 STQVHPDEPTAVQRLSEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLXDEDXVVVYQ 710
Query: 162 AAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLA 221
AAM+V+QLSKKEASR A+M SPQ++AA++R M NT D++T RC LHNLSHHR+GLLA
Sbjct: 709 AAMMVHQLSKKEASRHAIMNSPQMIAALIRAMANTEDIETTRCAAGTLHNLSHHRQGLLA 530
Query: 222 IFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNK-N 280
IFKSGGIPALV++LSSP+ESVLFYAITTLHNLLL+QEG+KMAVRLA GLQKMV LL + N
Sbjct: 529 IFKSGGIPALVKLLSSPMESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVALLQRNN 350
Query: 281 NPKFLAITTDCLQLLAYGNQESKLIILANGGPQGLVQIMRNYSYEKLLWTTSRVLKVLSV 340
N KFLAITTDCLQ+LAYGNQESKLIILA+GGP LV+IM++Y+YEKLLWTTSRVLKVLSV
Sbjct: 349 NVKFLAITTDCLQILAYGNQESKLIILASGGPGELVRIMKSYTYEKLLWTTSRVLKVLSV 170
Query: 341 CPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLESVLKIL 396
CPSNKPAIVEAGGMQAL HL S RLVQNCLW+LRNLSD ATK + +E +L +L
Sbjct: 169 CPSNKPAIVEAGGMQALAMHLGHQSQRLVQNCLWSLRNLSDAATKMDNMEGLLHML 2
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%)
Frame = -3
Query: 380 SDVATKQEGLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALI 439
+D+AT+ + ++K+L + +D V+ A + L+ + ++ + ALI
Sbjct: 784 ADLATR--AIPELIKLLXD----EDXVVVYQAAMMVHQLSKKEASRHAIMNSPQMIAALI 623
Query: 440 HAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVK 499
A+ A +D T H S H + +A + + GIPA+VKLL+ P + L
Sbjct: 622 RAM--ANTEDIETTRCAAGTLHNLSHHRQGLLA---IFKSGGIPALVKLLSSPMESVLFY 458
Query: 500 ATIGLIRNLAL 510
A I + NL L
Sbjct: 457 A-ITTLHNLLL 428
>15086
Length = 548
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 130/171 (76%), Positives = 152/171 (88%), Gaps = 1/171 (0%)
Frame = +1
Query: 143 ALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTA 202
A+PEL KLL+DED VVV +AAM+V+QLSKKEASR A+M SPQ++AA++R + T D++T
Sbjct: 1 AIPELIKLLSDEDQVVVCQAAMMVHQLSKKEASRHAIMNSPQMIAALIRALATTDDMETT 180
Query: 203 RCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKM 262
RC LHNLSHHR+GLLAIFKSGGIPALV++LSSPVESVLFYAITTLHNLLL+QEG+KM
Sbjct: 181 RCAAGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKM 360
Query: 263 AVRLADGLQKMVPLLNK-NNPKFLAITTDCLQLLAYGNQESKLIILANGGP 312
AVR+A GLQKMV LL + NN KFLAITTDCLQ+LAYGNQESKLIILA+GGP
Sbjct: 361 AVRMAGGLQKMVALLQRNNNVKFLAITTDCLQILAYGNQESKLIILASGGP 513
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 438 LIHAILRAGDKDDITEPAVCA--LRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQW 495
+I A++RA D E CA H S H + +A + + GIPA+VKLL+ P +
Sbjct: 127 MIAALIRALATTDDMETTRCAAGTLHNLSHHRQGLLA---IFKSGGIPALVKLLSSPVES 297
Query: 496 PLVKATIGLIRNLAL 510
L A I + NL L
Sbjct: 298 VLFYA-ITTLHNLLL 339
>38361
Length = 227
Score = 98.2 bits (243), Expect(2) = 8e-23, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 53/56 (94%)
Frame = -1
Query: 455 AVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLAL 510
+VCALRHLTSRHPEAEMAQN+VRL+YG+P +VKLL+ P++WPL+KA +GL+RNLAL
Sbjct: 170 SVCALRHLTSRHPEAEMAQNAVRLHYGLPVLVKLLHPPSRWPLIKAVVGLVRNLAL 3
Score = 27.7 bits (60), Expect(2) = 8e-23, Method: Compositional matrix adjust.
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -3
Query: 438 LIHAILRAGDKDDITEP 454
+ +++AGD++DITEP
Sbjct: 225 FVRTVMQAGDREDITEP 175
>12505
Length = 836
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 49/73 (67%)
Frame = -3
Query: 589 FVQLLYSSVENIQRVAAGVLCELXXXXXXXXXXXXXXXXXPLMELLHSRNEGTATYAAAV 648
+ QLLYS +ENIQRVAAGVLCEL PL ELLHSRNEG TYAAAV
Sbjct: 711 YHQLLYSPIENIQRVAAGVLCELAADKEGAEMIEQEGATAPLTELLHSRNEGVXTYAAAV 532
Query: 649 LFRISEDKNPDYR 661
LFR+SEDK DY+
Sbjct: 531 LFRMSEDKPQDYK 493
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/41 (85%), Positives = 41/41 (100%)
Frame = -1
Query: 209 LHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITT 249
LHNLSHHR+GLLAIF+SGGIPALV++LSSP+ESVLFYAIT+
Sbjct: 824 LHNLSHHRQGLLAIFRSGGIPALVKLLSSPMESVLFYAITS 702
>17600
Length = 752
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Frame = +1
Query: 629 PLMELLHSRNEGTATYAAAVLFRISEDKNPDYRKRVSVELTNSLFKHDPAAWEAAQSMIP 688
PL +LLHSRNEG ATYAAAVLFR+SEDK DY+KR+S+ELT+SL++ D W
Sbjct: 292 PLTDLLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSMELTSSLYRGDNMNWSEP----- 456
Query: 689 INEPYADDM----DATYRPMYS 706
P +DM D + PMYS
Sbjct: 457 ---PGFEDMGLLTDTSRDPMYS 513
>12579
Length = 1870
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Frame = +2
Query: 4 MNLIEQPI-----KVTEWQQT-YTYDSGIHSGVNTCVPSVSSKG---IMDEDDACGRXXX 54
M L++ P+ + WQQ Y DSGIHSG T PS+SSKG ++E D
Sbjct: 83 MELLDMPVDSKHEQTMMWQQNQYLADSGIHSGATTQAPSISSKGHGEELEEGDMDPTKMF 262
Query: 55 XXXXXXXXXGVPQNQGDLEYQMSTTARAKRVREAMCP 91
P+ ++ Q++ T R +RVR A+ P
Sbjct: 263 DWGLPDPFTPQPEQVEEMNQQLNQT-RPQRVRAAIFP 370
>36452
Length = 607
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 82/222 (36%), Gaps = 43/222 (19%)
Frame = +1
Query: 404 DVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLT 463
DV V C G L+ +C+ SK Q +G L+ +L++ +D+ P V L+
Sbjct: 7 DVEVARC--GALALWSCSKSKKNKEAMQRAGAIPLLAKLLKS-PHEDMLIPVVGTLQECA 177
Query: 464 SR-----------------------------HPEAEM--------------AQNSVRLNY 480
S +PE +M ++ VR
Sbjct: 178 SEPSYRLAIRTEGMIEDLVKNLKSSVPDKPANPELQMHCASAIFKCAEEKETRDLVRQYG 357
Query: 481 GIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQR 540
G+ +V LLN+ + L+ A G I A+ P N A QE I LV LL
Sbjct: 358 GLDPLVGLLNKMDNKELLAAATGAIWKCAISPENVARFQELKCIELLVALL--------- 510
Query: 541 HVAAGTQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFR 582
T QP EE++ GAL LA+ NR +I +
Sbjct: 511 -----TNQP-------EEVLVNVVGALGELAKAQPNRAQIRK 600
>22653
Length = 1347
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 64/172 (37%)
Frame = +3
Query: 481 GIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQR 540
G+ IV LL ++ ++ A I N+A N A + + V+P L +L + ++
Sbjct: 120 GLELIVSLLKSEDK-EVLAAVCAAIANIAKDEENLAVITDHGVVPMLAKLTLTTDDKLRQ 296
Query: 541 HVAAGTQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENI 600
H+A E I C NR + N + V+ L S EN+
Sbjct: 297 HLA-------------EAIARCCNWG--------NNRTAFGKENAVAPLVRYLKSKDENV 413
Query: 601 QRVAAGVLCELXXXXXXXXXXXXXXXXXPLMELLHSRNEGTATYAAAVLFRI 652
R A L +L PL++++ S ++ +A + I
Sbjct: 414 HRSTARALFQLSKNPENCITMHEAGVVQPLLKMVGSADDDLQESSAGCISNI 569
>36960
Length = 551
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 222 IFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAV 264
I +GGIP ++ LSS E + AITTL L+ Q A + V
Sbjct: 321 IVTNGGIPLVINCLSSCSEETVMSAITTLMYLITPQSQAAITV 449
>02294
Length = 517
Score = 29.6 bits (65), Expect = 4.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 329 WTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLR 377
W+ S K++ +C P I AGG KH P+ QNC LR
Sbjct: 255 WSXSGRSKLIGLCIVRAPPIGSAGGDNCQYKHSF*IVPKYKQNCQILLR 401
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|34147045|ref|NP_032851.2|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Mus musculus]
(518 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04908 448 e-126
26366 259 2e-69
18743 142 3e-34
10738 36 0.037
33076 29 5.4
08153 28 9.0
>04908
Length = 1856
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/420 (51%), Positives = 298/420 (70%), Gaps = 1/420 (0%)
Frame = +3
Query: 35 YMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYQSYDFFR 94
++ + PT+I M+GLPARGKTY +KL RYLNW+G+ TKVFN+G YRR S++FFR
Sbjct: 261 FVIDRPTVIAMVGLPARGKTYTGRKLMRYLNWVGIKTKVFNVGNYRRCVATGVSSHNFFR 440
Query: 95 HDNEEAMKIRKQCALVALEDVKAYFTEESGQIAVFDATNTTRERRDMILN-FAKQNAFKV 153
+N EA ++R+Q A++A+ D Y E G++A+FDATNTTRERR ++ + F K++ + +
Sbjct: 441 PNNAEAKEMRQQSAMLAIADTCKYM-ENGGEVAIFDATNTTRERRQLLAHHFTKEHPYDL 617
Query: 154 FFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTYQPLDPDNYDK 213
FFVESVCDD D I +NILEVKV PDY +N++ M DFL+RIE Y+ Y LD D+
Sbjct: 618 FFVESVCDDLDQIESNILEVKVDGPDYNGQNKDEAMVDFLQRIEHYREVYNRLDSPG-DE 794
Query: 214 DLSFIKVINVGQRFLVNRVQDYIQSKIVYYLMNIHVHPRTIYLCRHGESEFNLLGKIGGD 273
FI++I+ G+R +VN +QS++++YLMN+ V + IY+ RHGES N GKIGGD
Sbjct: 795 MTPFIQIIDQGRRLVVNNPVGVLQSRVLFYLMNVKVMRQPIYMTRHGESVMNRQGKIGGD 974
Query: 274 SGLSVRGKQFAHALKKFLEEQEIQDLKVWTSQLKRTIQTAESLGVTYEQWKILNEIDAGV 333
S LS +G ++A L +++ + I LKVWTS +KRT QTA+ + WKILNEI+AGV
Sbjct: 975 SDLSDQGLKYAEVLAQYMAGEHITGLKVWTSHMKRTSQTAQFIDAPQRPWKILNEINAGV 1154
Query: 334 CEEMTYSEIEQRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQGNILVISH 393
CE ++Y EI+++YP EFA RD++K+ YRYP GESY DLV RLE +I+ LE + N+L++ H
Sbjct: 1155CEGLSYEEIQEKYPSEFAQRDKDKFRYRYPDGESYLDLVARLETIILALEHEENVLIVGH 1334
Query: 394 QAVMRCLLAYFLDKGADELPYLRCPLHIIFKLTPVAYGCKVETITLNVDAVDTHRDKPTH 453
QAV+RCLLA+F D+L +++ LH + KLTP A+G KVE I L+V AV THR KP +
Sbjct: 1335QAVLRCLLAFFEGVDHDDLAHMQIDLHTVIKLTPTAFGPKVERIRLDVPAVSTHRAKPAN 1514
>26366
Length = 546
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 142/178 (79%)
Frame = +1
Query: 264 FNLLGKIGGDSGLSVRGKQFAHALKKFLEEQEIQDLKVWTSQLKRTIQTAESLGVTYEQW 323
NL G+IGGDS LS RG +A AL +F+EE+ I LKVWTS+LKRTIQT+ + E W
Sbjct: 13 MNLQGRIGGDSDLSDRGWSYAEALGRFVEEENIPQLKVWTSELKRTIQTSRHINAPKEHW 192
Query: 324 KILNEIDAGVCEEMTYSEIEQRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELE 383
K LNEIDAGVCE MTY EI+ +YPEEFALRDQ+K+ YRYP GESYQDLV RLEPVI+ELE
Sbjct: 193 KALNEIDAGVCEGMTYEEIQNKYPEEFALRDQDKFHYRYPSGESYQDLVARLEPVILELE 372
Query: 384 RQGNILVISHQAVMRCLLAYFLDKGADELPYLRCPLHIIFKLTPVAYGCKVETITLNV 441
RQ N++VI HQAV RCLLAYF DK A +LPYL+ PLH + KLTPVAYGC+VE + LNV
Sbjct: 373 RQENVMVICHQAVCRCLLAYFQDKSAHDLPYLKVPLHTVIKLTPVAYGCRVEFLALNV 546
>18743
Length = 465
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 87/109 (79%)
Frame = +2
Query: 35 YMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYQSYDFFR 94
++ +PT+I M+GLPARGKTY+SKKLTRYLNWIG+ T+ FN+G YRR A SY++++FFR
Sbjct: 107 HIVRAPTVIAMVGLPARGKTYISKKLTRYLNWIGISTRAFNVGEYRRAATNSYKNHNFFR 286
Query: 95 HDNEEAMKIRKQCALVALEDVKAYFTEESGQIAVFDATNTTRERRDMIL 143
DN+EA ++R +CAL+A++D F E G++AV DATNTT+ RR +++
Sbjct: 287 SDNKEAQELRTKCALMAVDDA-CKFLENGGEVAVIDATNTTQARRRLLV 430
>10738
Length = 1860
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 40/200 (20%)
Frame = -2
Query: 252 RTIYLCRHGESEFNLLGKIGG--DSGLSVRGKQFAHALKKFLEEQEIQDLKVWTSQLKRT 309
T+ L RHGESE+N G D+ LS G A + ++++ +TS LKR
Sbjct: 1730 HTLILVRHGESEWNKQNLFCGWHDADLSEAGXNEAKYAAQLIKDKGYLYDIAFTSVLKRA 1551
Query: 310 IQTAESLGVTYEQ--------WKILNEIDAGVCEEMTYSEIEQRYPEE------------ 349
I+T + ++ W+ LNE G + + +E ++ E+
Sbjct: 1550 IKTLYLIQDGTDRHWVPVLRSWR-LNERHYGGLQGLNKAETAAKHGEDQVKIWRRSYDVP 1374
Query: 350 ---FALRDQE------KYLYR----YPGGESYQDLVQRLEP-----VIMELERQGNILVI 391
+D E KY P E +D V R+ P ++ EL+ +L+
Sbjct: 1373 PPPLTPKDAEWSGNDPKYTKLDPNVIPACECLKDTVARVLPYWSDAIVPELKEGKTVLIA 1194
Query: 392 SHQAVMRCLLAYFLDKGADE 411
+H +R L+ Y LD DE
Sbjct: 1193 AHGNSLRALVKY-LDNMTDE 1137
>33076
Length = 1174
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -1
Query: 234 DYIQSKIVYYLMNIHVHPRTIYLCRHGESEFNLLGKIG 271
D + + I++ L N+H H ++ CRH + ++ ++G
Sbjct: 907 DTVSTHILHTLTNVHTHTHDLHTCRHTHTVHFVVRQLG 794
>08153
Length = 1703
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%)
Frame = +1
Query: 43 IVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYQSYDFFRHDNEEAMK 102
I+M+GL A GKT + KL +PT FN+ E V+ Y++ F D K
Sbjct: 91 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVE-YKNISFTVWDVGGQDK 252
Query: 103 IRKQCALVALEDVKAYFTEESGQIAVFDATNTTRERRDMILNFAKQNAFKVFFVESVCDD 162
IR + YF G I V D+ + RER +N AK+ ++ + + D
Sbjct: 253 IRPLW--------RHYFQNTQGLIFVVDSND--RER----INEAKEELARMLNEDDLRDA 390
Query: 163 PDVIAAN 169
++ AN
Sbjct: 391 IILVFAN 411
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|12963615|ref|NP_075768.1| tubulin, beta 3 [Mus
musculus]
(450 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13181 446 e-125
16482 441 e-124
04882 424 e-119
00276 274 6e-74
28905 250 2e-67
31457 239 1e-63
25015 221 5e-58
39157 211 9e-58
12457 207 9e-54
05902 157 1e-38
06360 131 6e-31
03702 122 4e-28
17215 83 2e-16
29025 33 0.17
24946 28 9.8
>13181
Length = 1092
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/219 (94%), Positives = 214/219 (97%)
Frame = -3
Query: 208 YDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
YDICFRTLKL TPTYGDLNHLVSATMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 1090 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 911
Query: 268 PGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVD 327
PGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA +FRGRMSMKEVD
Sbjct: 910 PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 731
Query: 328 EQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTA 387
EQML +Q+KNSSYFVEWIPNNVK AVCDIPPRGLKMS+TF+GNSTAIQELFKRISEQFTA
Sbjct: 730 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFVGNSTAIQELFKRISEQFTA 551
Query: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 550 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 434
>16482
Length = 837
Score = 441 bits (1133), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/246 (84%), Positives = 218/246 (88%)
Frame = +1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQLERI+VYYNEA+ KYV
Sbjct: 100 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 279
Query: 61 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
PRA+LVDLEPGTMDSVRSG FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 280 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 459
Query: 121 RKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKVREEYPDRIMNTFSVVPSPKVSDTVV 180
RKE E+CDCLQGFQ K+REEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 460 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 639
Query: 181 EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240
EPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL TPTYGDLNHLVSATMSGVTT L
Sbjct: 640 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 819
Query: 241 RFPGQL 246
RFPGQL
Sbjct: 820 RFPGQL 837
>04882
Length = 1136
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 198/208 (95%), Positives = 204/208 (98%)
Frame = +2
Query: 219 TPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGS 278
TPTYGDLNHLVSATMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGS
Sbjct: 320 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 499
Query: 279 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNS 338
QQYRALTVPELTQQMFD+KNMMAACDPRHGRYLTVA +FRGRMSMKEVDEQML +Q+KNS
Sbjct: 500 QQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNS 679
Query: 339 SYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398
SYFVEWIPNNVK AVCDIPPRGLKMS+TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY
Sbjct: 680 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 859
Query: 399 TGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
TGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 860 TGEGMDEMEFTEAESNMNDLVSEYQQYQ 943
>00276
Length = 1330
Score = 274 bits (700), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 204/355 (57%), Gaps = 8/355 (2%)
Frame = -3
Query: 78 SGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQXXX 137
+G + L P+ + G+ A NN+A+GHYT G ELVD VLD +RK + C LQGF
Sbjct: 1328 TGTYRQL-SPEQLVTGKEDAANNYARGHYTIGKELVDLVLDRIRKLADQCTGLQGFLIFH 1152
Query: 138 XXXXXXXXXXXXXXXXKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTD 197
++ +Y + F + P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 1151 SFGGGTGSGFTSLXMERLSVDYGKKSKLEFXIYPAPQVSTAVVEPYNSILTTHTTLEHSD 972
Query: 198 ETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNM 257
+ +DNEA+YDIC R L + PTY +LN L+ +S +T SLRF G LN DL + N+
Sbjct: 971 CAFMVDNEAIYDICRRNLDIERPTYTNLNRLIXQIVSSITASLRFDGALNVDLTEFQTNL 792
Query: 258 VPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVF 317
VP+PR+HF + +AP+ + + L V E+T F+ N + CDPRHG+Y+ ++
Sbjct: 791 VPYPRIHFPLATYAPVISAEKAYHEQLXVAEITNACFEPANQLVKCDPRHGKYMACCMLY 612
Query: 318 RGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPR--------GLKMSSTFIG 369
RG + K+V+ + I++K + FV+W P KV + PP ++ + +
Sbjct: 611 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 432
Query: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 431 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 267
>28905
Length = 425
Score = 250 bits (639), Expect(2) = 2e-67, Method: Compositional matrix adjust.
Identities = 118/129 (91%), Positives = 123/129 (95%), Gaps = 1/129 (0%)
Frame = -1
Query: 253 LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 312
+AVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 389 VAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 210
Query: 313 VATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNST 372
VA +FRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRGLKMS TFIGNST
Sbjct: 209 VAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSGTFIGNST 30
Query: 373 AIQ-ELFKR 380
AIQ LFKR
Sbjct: 29 AIQGRLFKR 3
Score = 23.9 bits (50), Expect(2) = 2e-67, Method: Composition-based stats.
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 242 FPGQLNADL 250
FPGQLNADL
Sbjct: 424 FPGQLNADL 398
>31457
Length = 1530
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/118 (94%), Positives = 115/118 (97%)
Frame = +3
Query: 309 RYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFI 368
+YLTVA +FRGRMSMKEVDEQML +Q+KNSSYFVEWIPNNVK AVCDIPPRGLKMSSTFI
Sbjct: 234 KYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI 413
Query: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 414 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 587
>25015
Length = 458
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 101/115 (87%), Positives = 108/115 (93%)
Frame = -3
Query: 20 FWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSG 79
FWEVISDEHGIDP+G Y GDSDLQLERI+VYYNEA+ KYVPRA+LVDLEPGTMDSVRSG
Sbjct: 363 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 184
Query: 80 AFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQ 134
FG +FRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQGFQ
Sbjct: 183 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 19
>39157
Length = 488
Score = 211 bits (537), Expect(2) = 9e-58, Method: Compositional matrix adjust.
Identities = 103/125 (82%), Positives = 113/125 (90%), Gaps = 3/125 (2%)
Frame = -1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60
MREIVH+QAGQCGNQIGAKFWEVISDEHGIDP+G Y GDSDLQLERI+VYYNEA+ KYV
Sbjct: 443 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 264
Query: 61 PRAILVDLEPGTMDSVRSGA-FG-HLFRPDNFIFGQSGAGNNWAKGHYTE-GAELVDSVL 117
PRA+LVDLEPGTMDSVRSG+ FG +FRPDNF+FGQSGAGNNW + T+ GAELVDSVL
Sbjct: 263 PRAVLVDLEPGTMDSVRSGSPFGPKIFRPDNFVFGQSGAGNNWGQKDTTQRGAELVDSVL 84
Query: 118 DVVRK 122
DVVRK
Sbjct: 83 DVVRK 69
Score = 30.8 bits (68), Expect(2) = 9e-58, Method: Compositional matrix adjust.
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2
Query: 122 KECENCDCLQGFQ 134
KE E+CDCLQGFQ
Sbjct: 70 KEAESCDCLQGFQ 32
>12457
Length = 781
Score = 207 bits (526), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 140/239 (58%)
Frame = -1
Query: 65 LVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEC 124
LVDLEP +D VR+G + LF P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 718 LVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 539
Query: 125 ENCDCLQGFQXXXXXXXXXXXXXXXXXXXKVREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
+ C LQGF ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 538 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 359
Query: 185 ATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPG 244
+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T SLRF G
Sbjct: 358 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDG 179
Query: 245 QLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAAC 303
LN DL + N+VP+PR+HF + +AP+ + + LTV E+T F+ N M C
Sbjct: 178 ALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKC 2
>05902
Length = 1127
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 159/282 (56%), Gaps = 12/282 (4%)
Frame = +2
Query: 154 KVREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICF 212
K+ + +P +++ T+SV P+ ++SD VV+PYN+ L++ +L +N D +DN AL I
Sbjct: 74 KLNDRFPKKLIQTYSVFPNVDEISDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAA 253
Query: 213 RTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 272
L + TPT+ +N LVS MS TT+LR+PG +N DL L +++P PRLHF M G+ P
Sbjct: 254 DRLHIDTPTFAQVNQLVSTVMSTSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTP 433
Query: 273 LTARGS-QQYRALTVPELTQQMFDAKNMMAACDPRHGR----YLTVATVFRGRMSMKEVD 327
LT R TV ++ +++ KNMM + P H + Y+++ + +G + +V
Sbjct: 434 LTTDSQVANVRKTTVLDVMRRLLQPKNMMVST-PVHRQANHCYISILNIIQGEVDPTQVH 610
Query: 328 EQMLAIQSKNSSYFVEWIPNNVKVAVCDIPP---RGLKMSSTFIGNSTAIQELFKRISEQ 384
+ + I+ + + F+ W P +++VA+ P ++S + N T+I LF+RI Q
Sbjct: 611 KSLQRIRERKLAQFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSISHLFERILRQ 790
Query: 385 FTAMFRRKAFLHWYTGEGM--DEM-EFTEAESNMNDLVSEYQ 423
+ + +R+AF+ + E + D + EF + + LV EYQ
Sbjct: 791 YDKLRKREAFMDQFKKEAIFKDNLDEFDNSREALQLLVDEYQ 916
>06360
Length = 1896
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 2/179 (1%)
Frame = -1
Query: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQL--ERISVYYNEASSHK 58
MRE + + GQ G Q+G WE+ EHGI P G D + + + +++E + K
Sbjct: 1710 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 1531
Query: 59 YVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLD 118
+VPRA+ VDLEP +D VR+G + LF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 1530 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTIGKEIVDLVLD 1351
Query: 119 VVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKVREEYPDRIMNTFSVVPSPKVSD 177
+RK + C LQGF ++ +Y + F++ P+P+VSD
Sbjct: 1350 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSD 1174
>03702
Length = 1932
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 84/140 (60%), Gaps = 1/140 (0%)
Frame = +1
Query: 167 FSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLN 226
F++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P Y +LN
Sbjct: 1501 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPXYTNLN 1680
Query: 227 HLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPG-FAPLTARGSQQYRALT 285
L+ +S +T SLRF G LN DL + N+VP P H PG P+ + + LT
Sbjct: 1681 RLIGQIVSSITASLRFDGALNVDLTEFQTNLVPTP--HPLPPGHLCPVISAEKAYHEQLT 1854
Query: 286 VPELTQQMFDAKNMMAACDP 305
V E+T F+ N + CDP
Sbjct: 1855 VAEVTNACFEPANQLVKCDP 1914
>17215
Length = 632
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 8/117 (6%)
Frame = +3
Query: 316 VFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPR--------GLKMSSTF 367
++RG + K+V+ + I++K + FV+W P KV + PP ++ +
Sbjct: 6 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 185
Query: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 186 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 356
>29025
Length = 395
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 412 ESNMNDLVSEYQQYQ 426
ESNMNDLVSEYQQYQ
Sbjct: 354 ESNMNDLVSEYQQYQ 310
>24946
Length = 955
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +3
Query: 330 MLAIQSKNSSYFV--EWIPNNVKVAVCDI 356
+++I K+ S F+ +W+PN+V + CD+
Sbjct: 798 VMSIDGKHFSVFLILDWVPNSVHINFCDV 884
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|42475974|ref|NP_852079.2| phosphoinositide-3-kinase,
class 3 [Mus musculus]
(887 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14901 429 e-125
05967 312 4e-85
34349 158 1e-38
06655 94 2e-19
18761 68 1e-11
12508 43 5e-04
18312 43 6e-04
28814 40 0.003
26068 40 0.003
11201 31 2.1
11722 29 7.7
>14901
Length = 1135
Score = 429 bits (1103), Expect(3) = e-125, Method: Compositional matrix adjust.
Identities = 193/322 (59%), Positives = 252/322 (78%), Gaps = 1/322 (0%)
Frame = -3
Query: 22 KIGSLEGKREQKSYKAVLEDPMLKFSGLYQ-ETCSDLYVTCQVFAEGKPLALPVRTSYKA 80
KIG+LEG+R + S K + E+P +FSG YQ E +DLYVTCQVF++G+ + LPV+T YKA
Sbjct: 1037 KIGTLEGERPRYSLKELREEPAKRFSGAYQREGNADLYVTCQVFSDGRSMGLPVQTCYKA 858
Query: 81 FSTRWNWNEWLKLPVKYPDLPRNAQVALTIWDVYGPGSAVPVGGTTVSLFGKYGMFRQGM 140
FS+RWNWNEW++LP+++ LPRNA +ALTIWD+ G AVPVGGT++ LF K G R+GM
Sbjct: 857 FSSRWNWNEWIQLPIQFSSLPRNAVLALTIWDIEGNFKAVPVGGTSIKLFSKRGKLRKGM 678
Query: 141 HDLKVWPNVEADGSEPTRTPGRTSSTLSEDQMSRLAKLTKAHRQGHMVKVDWLDRLTFRE 200
HDL+VWP V DGS+ ++TPG+ + D M RL+K+TK HR GHM+K DWLDRL+FRE
Sbjct: 677 HDLRVWPRVVGDGSDASKTPGKAKTN---DLMDRLSKMTKKHRNGHMIKCDWLDRLSFRE 507
Query: 201 IEMINESEKRSSNFMYLMVEFRCVKCDDKEYGIVYYEKDGDESSPILTSFELVKVPDPQM 260
IEMINE +KR +NFMYLM+EF + D++EY +VY+EKDGD+ +LV +PDP M
Sbjct: 506 IEMINERQKRETNFMYLMIEFPQITYDNQEYTVVYFEKDGDKGYEFRQIADLVTIPDPDM 327
Query: 261 SMENLVESKHHKLARSLRSGPSDHDLKPNATTRDQLNIIVSYPPTKQLTYEEQDLVWKFR 320
+ENL E+KHHK+ARSLRSGP D D+KP+A TRD L IV+YPPT Q++ EE+DL+WKFR
Sbjct: 326 LLENLYEAKHHKMARSLRSGPRDRDMKPDAKTRDMLKKIVAYPPTTQMSSEEEDLIWKFR 147
Query: 321 YYLTNQEKALTKFLKCVNWDLP 342
+YL+ Q++ALTKFLKCVNW +P
Sbjct: 146 FYLSTQKEALTKFLKCVNWKVP 81
Score = 36.6 bits (83), Expect(3) = e-125, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = -1
Query: 4 AEKFHYIYSCDLDINVQLK 22
+++FHY+YSCDLD N+Q+K
Sbjct: 1090 SDRFHYLYSCDLDFNLQIK 1034
Score = 26.2 bits (56), Expect(3) = e-125, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 344 EAKQALELLGKWKPMDV 360
EAKQA EL+ +W+ +DV
Sbjct: 78 EAKQATELMVRWQAVDV 28
>05967
Length = 1076
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/351 (47%), Positives = 219/351 (62%), Gaps = 7/351 (1%)
Frame = -1
Query: 238 KDGDESSPILTSFELVKVPDPQMSMENLVESKHHKLARSLRSGPSDHDLKPNATTRDQLN 297
+DGD+ +LV +PDP M +ENL E+KHHK+ARSLRSGP D D+KP+A TRD L
Sbjct: 1061 RDGDKGYEFRQIADLVTIPDPDMLLENLYEAKHHKMARSLRSGPRDRDMKPDAKTRDMLK 882
Query: 298 IIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLPQEAKQALELLGKWKP 357
IV+YPPT Q++ EE+DL+WKFR+YL+ Q++ALTKFLKCVNW +P EAKQA EL+ +W+
Sbjct: 881 KIVAYPPTTQMSSEEEDLIWKFRFYLSTQKEALTKFLKCVNWKVPLEAKQATELMVRWQA 702
Query: 358 MDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDXXXXXXXXXXXXKYENFDDIKNGLE- 416
+DV D+LELLS +TNP VR+YAV+RL ADDED KYENF++IK+ +E
Sbjct: 701 VDVVDALELLSPAFTNPLVRKYAVSRLEMADDEDLLLYLLQLLQALKYENFNEIKSKVED 522
Query: 417 -----PTKKDSQTXXXXXXXXXXXXXGDIDSSQIITNXXXXXXXXXXXXXXXXXXDGENL 471
P + S+ SS IT+
Sbjct: 521 APPVPPPQTVSEDNPSPERERSSSSVSRTSSSDSITDALSAAPSRPDTASSTTKLGS--- 351
Query: 472 EQDLCTFLISRACKNSTLANYLYWYVIVECEDQ-DTQQRDPKTHEMYLNVMRRFSQALLK 530
+ DL TFLISRAC N LANY +WY+ VECE+Q D Q R + EMY+ VM+RFS AL +
Sbjct: 350 QMDLATFLISRACNNPVLANYFFWYLSVECEEQPDNQSRYEQAREMYVCVMKRFSNALKQ 171
Query: 531 GDKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNE 581
MRS+L Q+ F++ +V ++K V RESG+R KK E+LQALL D E
Sbjct: 170 QSCH---MRSVLTTQKNFLENIVQMVKIVTRESGSRSKKIEKLQALLHDPE 27
>34349
Length = 413
Score = 158 bits (399), Expect = 1e-38, Method: Composition-based stats.
Identities = 71/97 (73%), Positives = 80/97 (82%)
Frame = +2
Query: 740 GVGDRHLDNLLLTKTGKLFHIDFGYILGRDXXXXXXXXXXNKEMVEGMGGTQSEQYQEFR 799
GVGDRHLDNLLLT GKLFHIDFGYILGRD +KEMVE MGG S+ Y EFR
Sbjct: 2 GVGDRHLDNLLLTTNGKLFHIDFGYILGRDPKPMPPPMKLSKEMVEAMGGVSSDHYHEFR 181
Query: 800 KQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPD 836
KQCYTA+LHLRR++N++LNLFSLMVDA++PDIALEPD
Sbjct: 182 KQCYTAYLHLRRHANVMLNLFSLMVDASVPDIALEPD 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -2
Query: 108 LTIWDVYGPGSAVPVGGTTVSLFGKYGMFRQGMHDLKVW 146
LTI+DV G +GGT +S+FGK GMFRQGM+DL+VW
Sbjct: 400 LTIFDVRA-GQTTVIGGTAISMFGKDGMFRQGMYDLRVW 287
>06655
Length = 1350
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 99/173 (57%), Gaps = 5/173 (2%)
Frame = -2
Query: 703 FFRKYAPSETGPYGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDF 762
F ++ PS + + ++A+ +V+SCAGYC++ Y++ V DRH N+LL G + HIDF
Sbjct: 1316 FVHEFGPSNSEEF-LTAQ--KNFVQSCAGYCLVCYLMQVKDRHNGNILLDAEGHIIHIDF 1146
Query: 763 GYIL----GRDXXXXXXXXXXNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILN 818
G+IL G++ E VE MGG S+ ++ F+ F+ R++ + IL
Sbjct: 1145 GFILSTSPGKNLGFENSPFKLTTEFVEVMGGQGSDMFEYFKILMLQGFVASRKHMDQILP 966
Query: 819 LFSLM-VDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHAL 870
L +M + +P + + TV+ ++D+F +++++E+ + +L++ S+H+L
Sbjct: 965 LVEIMQTGSQLPCFS-KGVSTVRGLKDRFHMNMTEEQLQLLVDNLVESSLHSL 810
>18761
Length = 492
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Frame = +3
Query: 741 VGDRHLDNLLLTKTGKLFHIDFGYILGR-----DXXXXXXXXXXNKEMVEGM--GGTQSE 793
+GDRH DN++L ++G +FHIDF LG + +MV + GG Q
Sbjct: 3 IGDRHNDNIMLKQSGHMFHIDFSKFLGDAQMFGNIKRDRVPFVLTPDMVFVINDGGKQGN 182
Query: 794 QYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDE 853
++Q+F C AF LR +++L NLF LM + IP + ++ V +Q +
Sbjct: 183 RFQQFIDLCCQAFNILRTHADLFRNLFMLMSRSGIPGVT---EQAVTYIQRALLPGYTKA 353
Query: 854 EAVHYMQSLIDESVHALFAAVVEQIHKFAQ 883
+A +I++S+ +L IH AQ
Sbjct: 354 QASAAFTRMIEDSMRSLSTQFNFFIHNLAQ 443
>12508
Length = 550
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Frame = +3
Query: 308 LTYEEQDLVWKFRYYLTNQEKALTKFLKC-----VNWDLPQEAKQALELLGKWKPMDVED 362
LT EE +++W +R+YL ++ AL + L+ +W + + LL W P+
Sbjct: 231 LTAEEMEIIWTYRHYLYSKPTALPRILQAKGAHGWHWSSLPDLRS---LLSLWPPLHPTQ 401
Query: 363 SLELLSSHYTNPTVRRYAVARLRQADDEDXXXXXXXXXXXXKYENFDD 410
+ E+L Y + VR +A L + +D K+E++ +
Sbjct: 402 AFEILLPQYPDLGVREFAAESLARIPADDLAHFLPQLIQALKFESYHN 545
>18312
Length = 560
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 725 YVKSCAGYCVITYILGVGDRHLDNLLL-TKTGKLFHIDFGYILGR 768
Y +S A ++ YILG+GDRH+ N+L+ T +L HID G L +
Sbjct: 150 YTRSVATNSIVGYILGLGDRHVMNILIDCVTAELIHIDLGIALNK 16
>28814
Length = 372
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = -3
Query: 618 PAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKE----NLDLKLTPYKVL 673
P +L DG +Y + K +DLRQD+ ++Q+ L++ LLR +L +T + +
Sbjct: 352 PRKLSIFGSDGKEYQFLLKGHEDLRQDERVMQLFGLVNSLLRNNADTFRRNLTITRFAAI 173
Query: 674 ATSTKHGFMQFIQSVPVAEVLDT 696
ST G + + VP + L T
Sbjct: 172 PLSTNSGLIGW---VPHCDTLHT 113
>26068
Length = 460
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +2
Query: 734 VITYILGVGDRHLDNLLLT-KTGKLFHIDF 762
+I YI+G+GDRHLDN+L+ TG++ HID+
Sbjct: 2 MIGYIIGLGDRHLDNVLVDLATGEVVHIDY 91
>11201
Length = 916
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -3
Query: 325 NQEKALTKFLKCVNWDLPQEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRR 378
N A C N L + + Q + LLG + DV L L H T+PT R+
Sbjct: 218 NNSIAADHIADCYNRSLNRSSDQPVLLLGDFNTCDVSKHLPHLYQHVTHPTRRQ 57
>11722
Length = 814
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 278 RSGPSDHDLKPNATTRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYL-TNQEKALTKFLKC 336
++ +++ ++ +T+D + VS+ P L E L Y N A C
Sbjct: 456 KTWATNYTVRETVSTKDFELLCVSFRP-HYLPREFSQLTVILVYVPGPNNSIAADHIADC 632
Query: 337 VNWDLPQEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRR 378
N L + + Q + LLG + DV L L + T+PT R+
Sbjct: 633 YNRSLNRSSDQPVLLLGDFNTCDVSKHLPHLYQYVTHPTRRQ 758
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|112807186|ref|NP_766307.2| GCN1 general control of
amino-acid synthesis 1-like 1 [Mus musculus]
(2671 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10671 375 e-124
30928 166 5e-41
14383 44 7e-04
25535 34 0.75
>10671
Length = 1836
Score = 375 bits (964), Expect(2) = e-124, Method: Compositional matrix adjust.
Identities = 191/437 (43%), Positives = 282/437 (64%), Gaps = 1/437 (0%)
Frame = -2
Query: 180 VEQYFSAILSLEPSQNYAAMLGLLVQFCTNHKEMDAVSQHKSTLLEFYVKNILMSKAKPP 239
+E+Y + +EPS +G ++Q+ + K + ++K LE Y+K +L S+ PP
Sbjct: 1832 LEKYLCFMEKVEPSVFNTCCMGCVLQYLSATKNKALLDKYKGAYLELYLKQVLASRTTPP 1653
Query: 240 KYLLDNCAPLLRFMSHSEFKDLILPTIQKSLLRSPENVIETISSLLASVTLDLSQYALDI 299
+L + +LR +H EFK +LP QK++LR+PE ++ T+ +L+ +++DLSQYA D+
Sbjct: 1652 LSVLVSSQEILRHCNHEEFKGQVLPAAQKAMLRNPEVILSTVGRMLSQLSVDLSQYAGDL 1473
Query: 300 VKGLANQLKSNSPRLMDEAVLALRNLARQCSDSSATEALTKHLFAILGGSEGKLTIIAQK 359
K L Q+ S EAV+ ++NLA QCSD A E L KH F +L GSEGKLT++ QK
Sbjct: 1472 GKLLGAQIVSKDEGTRKEAVVGVKNLAVQCSDPGAVEKLVKHFFGVLNGSEGKLTVVDQK 1293
Query: 360 MSVLSGIGSLSHHVVSGPSG-QVLNGCVAELFIPFLQQEVHEGTLVHAVSILALWCNRFT 418
MSVL G+G+L ++ VSG + Q L VA+LF+P LQQEVHEGTLVH +++L+LWC++F
Sbjct: 1292 MSVLQGVGNLFYNTVSGTASLQDLASKVADLFLPTLQQEVHEGTLVHTLAMLSLWCSKFY 1113
Query: 419 TEVPKKLTDWFKKVFSLKTSTSAVRHAYLQCMLASFRGDTLLQALDFLPLLMQTVEKAAS 478
T VP KL WF+K +LK+STSAVR+AY C+ A F GDT+ QA +PLL+QT+EK
Sbjct: 1112 TAVPDKLLLWFEKGLTLKSSTSAVRNAYFLCINACFHGDTMQQATRVVPLLLQTLEKGGK 933
Query: 479 QGTQVPTVTEGXXXXXXXXXXXXXDAQAEAKLSGFWQLVVDEKRQTFTSEKFLLLASEDA 538
Q +Q+ VTE D +A++K+ FW +V++ +Q F S+KFL AS++
Sbjct: 932 QPSQLNLVTEVVSTSRTLVRLASVDIEADSKMGPFWSMVLEPSKQWFLSDKFLGSASDET 753
Query: 539 LCTVLRLTERLFLDHPHRLTNSKVQQYYRVLVAVLLSRTWHVRRQAQQTVRKLLSSLGGV 598
LC+++ +TERL +D P+++T + + YYR LV L R+W VR TVRKLL+ LGG
Sbjct: 752 LCSMVAVTERLVMDFPNKMTEAVSRPYYRALVFCLTRRSWTVRGPTITTVRKLLAMLGGA 573
Query: 599 KLANGLLDELKTVLNSH 615
++A L+DE K +L +
Sbjct: 572 QIALALIDEFKAILATQ 522
Score = 92.4 bits (228), Expect(2) = e-124, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%)
Frame = -1
Query: 638 VPPRVLQEALCVISGVPGLKGDIPSTEQLAQEMLIISHHPSLVAVQSGLWPALLTRMKID 697
+ P++L AL + V K D E +A L+ +HHP ++ +W ++ R+ +
Sbjct: 453 ITPKILCSALLAVCSVE--KVDTRDAEAIAMATLLPAHHPYIMYSNQDMWVEIIQRLNLQ 280
Query: 698 PDAFITRHLDQIIPRITTQSPLNQSSMNAMGSLSVLSPDRVLPQLISTITASVQNPALCL 757
P F+ +H+DQ + T + L ++ A+ ++ + P+ V+P +IS +T+ + N L
Sbjct: 279 PHKFVEKHVDQCLAFAKTGNILPENVKKAVETVCRVCPESVVPSVISYVTSLLSNTGLEQ 100
Query: 758 VTREEFSIMQTPAGELFDKSIIQSAQQDS 786
+TREE+ I TP GEL+D+SII +A + S
Sbjct: 99 ITREEYGIFLTPEGELYDRSIIDNAMKTS 13
>30928
Length = 343
Score = 166 bits (420), Expect(2) = 5e-41, Method: Composition-based stats.
Identities = 77/103 (74%), Positives = 89/103 (86%)
Frame = +2
Query: 1750 PHVRDGYIMMFNYLPITFGDKFTPYVGPIIPCILKALADENEFVRDTALRAGQRVISMYA 1809
P VRDGYIM + YLP FG F YVGPI+P IL+ALADE+EFVRDTALRAGQR+IS YA
Sbjct: 5 PSVRDGYIMTYIYLPAVFGTDFAQYVGPILPSILQALADESEFVRDTALRAGQRIISQYA 184
Query: 1810 ETAIALLLPQLEQGLFDDLWRIRFSSVQLLGDLLFHISGVTGK 1852
+TAI LLLP+LE+GLFDD WRIR+SSVQLLGDLL+ +SGV+GK
Sbjct: 185 DTAIELLLPELERGLFDDNWRIRYSSVQLLGDLLYKVSGVSGK 313
Score = 22.7 bits (47), Expect(2) = 5e-41, Method: Compositional matrix adjust.
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 1848 GVTGKMTTETASED 1861
G +MTTETA ED
Sbjct: 300 GCLARMTTETADED 341
Score = 40.8 bits (94), Expect = 0.008, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%)
Frame = +2
Query: 1435 REGALFAFEMLCTMLGKLFEPYXXXXXXXXXXCFGDGNQYVREAADDCAKAVMSNLSAHG 1494
R+G + + L + G F Y D +++VR+ A + ++S +
Sbjct: 14 RDGYIMTYIYLPAVFGTDFAQYVGPILPSILQALADESEFVRDTALRAGQRIISQYADTA 193
Query: 1495 VKLVLPXXXXXXXXXXWRTKAGSVELLGAMAY 1526
++L+LP WR + SV+LLG + Y
Sbjct: 194 IELLLPELERGLFDDNWRIRYSSVQLLGDLLY 289
>14383
Length = 710
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Frame = +2
Query: 1646 TDQKDLAPYLPSVTPGLKASLLDPVPEVRTVSAKALGAMV---KGMGESCFEDLLPWLME 1702
T ++ LAPY+ + P L DP P ++ A A+V K ++ +++L L++
Sbjct: 35 TSREQLAPYMSQIVPRLYRYQFDPNPRIQQAMAGIWSALVTDNKKTVDTYLKEILHDLLK 214
Query: 1703 TLTYEQSSVDRSGAAQGLAEVMAGLGVEKLEKLMPEIVATASKV--DIAPHVR---DGYI 1757
LT Q V R + + +++ G ++ + + +PE+ +V DI VR D
Sbjct: 215 NLTNNQWRV-RESSCNAVTDLLRGRTLDTIVEDLPELWEQCLRVRDDIKESVRLSADQSC 391
Query: 1758 MMFNYLPITFGDKFTPYVG-----PIIPCILKALADENEFVRDTALRA-GQRVISMYAET 1811
+ + I D G ++PC+L + N V++ +RA G I ++
Sbjct: 392 KTLSKVSIRICDPENGQAGERATSAVLPCLLNITLNTN--VKE--VRAIGLSTILEISKK 559
Query: 1812 AIALLLPQLEQGLFDDLWRIRFSSVQLLGDLLFHISG 1848
A LL P + + L + Q+L L FH S
Sbjct: 560 AGKLLKPHIHTLVVALLEAVSGLEPQVLNYLSFHTSS 670
>25535
Length = 437
Score = 34.3 bits (77), Expect = 0.75, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = -1
Query: 172 LWKENPGLVEQYFSAILSLEP-------SQNYAAMLGLLVQFCTNHKEMDAVSQHKSTLL 224
L K++PG+V+QY +LS E + ML L+ +N E + +++H
Sbjct: 281 LAKKDPGIVKQYERGMLSEETLMKSDTFENMFGGMLKGLIAATSNWSEYENITKHLQRFS 102
Query: 225 EFYVKNILMSKAKP 238
+ + K IL++ AKP
Sbjct: 101 DSFRK-ILLAAAKP 63
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|22122615|ref|NP_666219.1| ARP1 actin-related protein
1 homolog B, centractin beta [Mus musculus]
(376 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04742 439 e-124
12322 376 e-105
39562 356 7e-99
02757 139 2e-63
00608 179 2e-45
32273 176 1e-44
01436 129 2e-30
19721 92 3e-30
36954 119 3e-27
11487 67 3e-20
18926 95 5e-20
13361 90 2e-18
26639 30 1.1
14855 28 7.0
>04742
Length = 2111
Score = 439 bits (1129), Expect = e-124, Method: Compositional matrix adjust.
Identities = 200/369 (54%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
Frame = +2
Query: 12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTI 71
+VIDNGSG+ KAGFAGD P+ FP+ VGRP+H VM G + D ++G +A+ RG+LT+
Sbjct: 116 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 295
Query: 72 RYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFET 131
+YP+EHG+V +W+DME+IW + + ++L+ EEHPVLLTEAPLNP NREK ++ FET
Sbjct: 296 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 472
Query: 132 FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVS 191
FN PA+++++QAVLSLYA+GRTTG+VLDSGDGV H VPIYEG+A+PH+I R+D+AGRD++
Sbjct: 473 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYEGYALPHAISRLDLAGRDLT 652
Query: 192 RYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKD--EALETEKVQ--YTLPDGS 247
YL +L + G F T+AE E+VR IKE+ CY++++ +++ A + ++ Y LPDG
Sbjct: 653 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQ 832
Query: 248 TLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLF 307
+ +G RFR PE +FQP +G ES G HE +I K D+D+R+ L++N VLSGGST++
Sbjct: 833 VITIGNERFRCPEAMFQPSFLGMESAGXHETTYNSIMKCDVDIRKDLYANTVLSGGSTMY 1012
Query: 308 KGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367
G DR+ E+ LAP +KIKI AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 1013PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1192
Query: 368 SRAIHRKTF 376
+HRK F
Sbjct: 1193PSIVHRKCF 1219
>12322
Length = 849
Score = 376 bits (965), Expect = e-105, Method: Compositional matrix adjust.
Identities = 173/213 (81%), Positives = 202/213 (94%)
Frame = +1
Query: 164 VTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACY 223
VTHAVP+YEGFAMPHSIMRVD+AGRDV+RYLRLLLRKEG D HT+AEFEVV+ IKER CY
Sbjct: 1 VTHAVPVYEGFAMPHSIMRVDVAGRDVTRYLRLLLRKEGMDLHTTAEFEVVKHIKERTCY 180
Query: 224 LSINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAI 283
LSINP K+E+++TEKV YTLPDG+T++VGPARFRAPELLF+PDL+G+E EG+HEVL+++I
Sbjct: 181 LSINPLKEESVDTEKVSYTLPDGNTVEVGPARFRAPELLFRPDLIGEECEGIHEVLSYSI 360
Query: 284 HKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIG 343
KSD+DLR+TL+SNIVLSGGSTLFKGFGDRLLSE+KKLAPKD+KI+ISAPQERLYSTWIG
Sbjct: 361 QKSDVDLRKTLYSNIVLSGGSTLFKGFGDRLLSELKKLAPKDIKIRISAPQERLYSTWIG 540
Query: 344 GSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376
SILASLDTF+KMWVSK+EY E+G +AIHRKTF
Sbjct: 541 XSILASLDTFRKMWVSKREYHEEGVKAIHRKTF 639
>39562
Length = 1438
Score = 356 bits (914), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 164/302 (54%), Positives = 226/302 (74%), Gaps = 4/302 (1%)
Frame = -2
Query: 79 VVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALF 138
+V +W+DME+IW + + ++L+ EEHPVLLTEAPLNP NREK ++ FETFN PA++
Sbjct: 1437 IVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 1261
Query: 139 ISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLL 198
+++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++ YL +L
Sbjct: 1260 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 1081
Query: 199 RKEGADFHTSAEFEVVRTIKERACYLSINPQKD--EALETEKVQ--YTLPDGSTLDVGPA 254
+ G F T+AE E+VR IKE+ Y++++ +++ A + ++ Y LPDG + +G
Sbjct: 1080 TERGYSFTTTAEREIVRDIKEKLDYVALDFEQEMLTAASSSSLEKSYELPDGQVITIGNE 901
Query: 255 RFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRL 314
RFR PE +FQP +G ES G+HE +I K D+D+R+ L++N VLSGGST++ G DR+
Sbjct: 900 RFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRM 721
Query: 315 LSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRK 374
E+ LAP +KIKI AP ER YS WIGGSILASL TF++MW+SK+EY+E G +HRK
Sbjct: 720 QKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 541
Query: 375 TF 376
F
Sbjct: 540 CF 535
>02757
Length = 1094
Score = 139 bits (351), Expect(3) = 2e-63, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
Frame = -2
Query: 177 PHSIMRVDIAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALET 236
P +I+R+D+AGRD++ YL +L + G F T+AE E+V IKE+ CY++++ +++ A
Sbjct: 997 PTAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVXDIKEKLCYVALDFEQEMATAA 818
Query: 237 EKVQ----YTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRR 292
Y LPDG + +G RFR PE LFQP +G ES G+HE +I K D+D+R+
Sbjct: 817 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRK 638
Query: 293 TLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPK 324
L++N VLSGG+T+F G DR+ E+ LAP+
Sbjct: 637 DLYANTVLSGGTTMFPGIADRMQKEITALAPQ 542
Score = 75.5 bits (184), Expect(3) = 2e-63, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = -3
Query: 326 VKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376
+KIK AP ER YS WIGGSILASL TF++MW+SK+EY+E G +HRK F
Sbjct: 537 MKIKXIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 385
Score = 67.0 bits (162), Expect(3) = 2e-63, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -1
Query: 145 LSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPH 178
LSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH
Sbjct: 1094 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPH 993
>00608
Length = 1930
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 181/324 (55%), Gaps = 35/324 (10%)
Frame = +3
Query: 79 VVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALF 138
++ DW+ MER ++ V K L+ E+H LLTE PLN +NRE AE+ FE+FNVP L+
Sbjct: 3 IIDDWDLMERFYEQVIFK-YLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLY 179
Query: 139 ISMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDV 190
I++QAVL+L A+ + TG V+DSGDGVTH +P+ EG+ + I + IAGRD+
Sbjct: 180 IAVQAVLALAASWTSRNVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 359
Query: 191 SRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKD-EALETEKVQYTLP-DGS- 247
+ +++ LLR+ E + IKER Y+ + K+ +T+ ++ +G
Sbjct: 360 TYFIQQLLREREVGIPPEQSLETAKAIKERFSYVCPDIAKEFSKYDTDPSKWMKKYEGRN 539
Query: 248 -------TLDVGPARFRAPELLFQPDLVG-DESEGLHEVLAFAIHKSDMDLRRTLFSNIV 299
++DVG RF PE+ F P+ D + + +V+ I +D+RR L+ NIV
Sbjct: 540 TISKQLFSVDVGYERFLGPEIFFHPEFSNPDFTMPISDVVDDVIQNCPIDVRRGLYKNIV 719
Query: 300 LSGGSTLFKGFGDRLLSEVK----------------KLAPKDVKIKISAPQERLYSTWIG 343
LSGGST+F+ FG ++ +VK ++ PK +++++ + Y+ W G
Sbjct: 720 LSGGSTMFRDFGRKIQRDVKRVVDGRLKASEELSQGRIKPKPIEVQVITHHMQRYAVWFG 899
Query: 344 GSILASLDTFKKMWVSKKEYEEDG 367
GS+LAS F ++ +K +Y+E G
Sbjct: 900 GSMLASTPEFYQVCHTKADYDEHG 971
>32273
Length = 265
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 86/88 (97%)
Frame = -2
Query: 68 LLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEV 127
L++IRYPMEHG+V+DWNDMERIWQY+YSKDQLQTFSEEHPVLLTEAPLNP +NREKAAE+
Sbjct: 264 LMSIRYPMEHGIVKDWNDMERIWQYIYSKDQLQTFSEEHPVLLTEAPLNPRRNREKAAEI 85
Query: 128 FFETFNVPALFISMQAVLSLYATGRTTG 155
FF+TFNVPALFISMQAVLSLYATGR TG
Sbjct: 84 FFDTFNVPALFISMQAVLSLYATGRITG 1
>01436
Length = 2563
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 112/200 (56%), Gaps = 16/200 (8%)
Frame = +3
Query: 190 VSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKV----QYTLPD 245
++RYL LL G F+ SA+FE VR +KE+ CY + + ++++ L E Y LPD
Sbjct: 3 ITRYLIKLLLLRGYAFNHSADFETVRMLKEKLCYTAYDVEQEQKLALETTVLVEPYILPD 182
Query: 246 GSTLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGST 305
G + VG RF APE LFQP L+ + G+ E+L I +DMD+R + +IVLSGGST
Sbjct: 183 GRVIKVGGERFEAPEALFQPHLINVDGVGVAELLFNTIQAADMDIRPDFYKHIVLSGGST 362
Query: 306 LFKGFGDRLLSEVKKLAPKDV-----------KIKISAPQERLYSTWIGGSILASLDTFK 354
++ G RL E+K+L + V KI+I P R + ++GGS+ A + K
Sbjct: 363 MYPGLPSRLEREIKQLYLERVLXGDTSRLSKFKIRIEDPPRRKHMVFLGGSVXADIMKDK 542
Query: 355 -KMWVSKKEYEEDGSRAIHR 373
W+ + EYEE G + + +
Sbjct: 543 DDFWMMRSEYEEMGVKVLDK 602
>19721
Length = 757
Score = 91.7 bits (226), Expect(2) = 3e-30, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 8/121 (6%)
Frame = +2
Query: 79 VVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALF 138
VV DW+ ER + K L+ E+H LLTE PLN +NRE AE+ FETFN+P L+
Sbjct: 2 VVEDWDLHERFMEQAIFK-YLRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNIPGLY 178
Query: 139 ISMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDV 190
I++QAVL+L A+ + TG V+DSGDGVTH +P+ +G+ + +I + IAGRD+
Sbjct: 179 IAVQAVLALAASWTSRPPNERTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDI 358
Query: 191 S 191
+
Sbjct: 359 T 361
Score = 58.2 bits (139), Expect(2) = 3e-30, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
Frame = +3
Query: 212 EVVRTIKERACYLSINPQKDEA---------LETEKVQYT--LPDGSTLDVGPARFRAPE 260
E + IKER Y+ + K+ A ++ K+ + PD S DVG +F PE
Sbjct: 420 EAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKAHKMSGSSKYPDFS-FDVGYEKFLGPE 596
Query: 261 LLFQPDLV-GDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFK 308
+ F+P+ V GD + +V+ I +D RR L++NIVLSGGS++FK
Sbjct: 597 VFFRPEFVNGDFQASISDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMFK 743
>36954
Length = 892
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 9/199 (4%)
Frame = -1
Query: 12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTI 71
+V D GS +AG+AG+ PK P +VG + + GD P+ + + +
Sbjct: 802 LVFDIGSYSFRAGYAGEDTPKAEIPTHVGVMEDIETTMDTDGGDAPPQPEKKYLIDTVYM 623
Query: 72 RYP---------MEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNRE 122
++P ++ G+V DW+ E++ Y Y++ +++ S HP+L++E N RE
Sbjct: 622 KHPRKGMHLNSFLKDGMVEDWDMFEKVIDYAYNR-SIKSESCLHPLLMSEPAWNTKAKRE 446
Query: 123 KAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMR 182
K E+ FE +N+PA F+ +VLS +A GR+T ++LDSG T AVP+Y+G+ + I++
Sbjct: 445 KLTEIMFEKYNIPAFFLRKNSVLSAFANGRSTALILDSGATHTSAVPVYDGYVLTQGIVK 266
Query: 183 VDIAGRDVSRYLRLLLRKE 201
+AG ++R LL+ ++
Sbjct: 265 SPLAGDFIARECGLLMEEQ 209
>11487
Length = 771
Score = 67.0 bits (162), Expect(3) = 3e-20, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = -2
Query: 335 ERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376
ER YS WIGGSILASL TF++MW+SK+EY+E G +HRK F
Sbjct: 599 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 474
Score = 45.4 bits (106), Expect(3) = 3e-20, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = -1
Query: 282 AIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSE 317
+I K D+D+R+ L++N VLSGG+T+F G DR+ E
Sbjct: 756 SIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKE 649
Score = 23.5 bits (49), Expect(3) = 3e-20, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 318 VKKLAPKDVKIKISAPQE 335
+ LAP +KIKI APQ
Sbjct: 649 ITALAPPTMKIKIIAPQN 596
>18926
Length = 478
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Frame = +1
Query: 274 GLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIKI--- 330
G+ V+ ++ D+D+R +L+ ++ GG++L +GF +RL ++ P +++KI
Sbjct: 97 GVGHVVTTSVGMCDIDIRPSLYGGVIAVGGNSLIQGFTERLNRDLSNKTPPSMRLKIIAA 276
Query: 331 SAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKT 375
++ ER +S+WIGGSILASL +F++MWVSK+EYEE G + RK
Sbjct: 277 ASTAERRFSSWIGGSILASLGSFQQMWVSKQEYEEGGKSCVERKC 411
>13361
Length = 1217
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 17/137 (12%)
Frame = +3
Query: 248 TLDVGPARFRAPELLFQPDLVG-DESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTL 306
+DVG RF PE+ F P+ D + L E++ I +D+RR L++NIVLSGGST+
Sbjct: 150 NVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRHLYNNIVLSGGSTM 329
Query: 307 FKGFGDRLLSEVK----------------KLAPKDVKIKISAPQERLYSTWIGGSILASL 350
FK FG RL ++K ++ PK + +++ + Y+ W GGS+LAS
Sbjct: 330 FKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLAST 509
Query: 351 DTFKKMWVSKKEYEEDG 367
F ++ +K YEE G
Sbjct: 510 PEFYQVCHTKAAYEEYG 560
>26639
Length = 435
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 44 HMRVMAGALEGDLFIGPKAEEHRGLLTIRYPMEHGVV 80
H +V+AGALEGD+ G IR P++HG V
Sbjct: 71 HGKVLAGALEGDV----------GSTNIRXPVQHGHV 151
>14855
Length = 1907
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 204 DFHTSAEFEVVRTIKERACYLSINPQKDE 232
+FH S EFE ++ I + CY S + Q +E
Sbjct: 1015 NFHVSKEFE*MKVINIKCCYESDSEQMEE 1101
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|225543319|ref|NP_033529.3| valosin containing protein
[Mus musculus]
(806 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
38672 384 e-124
03022 250 9e-79
06766 202 6e-52
07243 201 8e-52
01642 199 4e-51
02582 197 1e-50
23766 168 2e-48
19129 170 2e-42
07247 144 2e-38
12235 139 6e-33
00810 125 8e-29
20270 114 1e-25
02191 100 4e-21
25671 82 9e-16
26408 79 8e-15
17843 61 2e-09
25936 59 6e-09
02194 54 3e-07
29846 46 7e-05
05247 34 8e-04
08000 39 0.006
01279 39 0.008
15498 36 0.067
19561 32 1.1
27434 30 3.0
01793 30 3.4
30736 30 5.2
>38672
Length = 730
Score = 384 bits (987), Expect(2) = e-124, Method: Compositional matrix adjust.
Identities = 183/206 (88%), Positives = 199/206 (96%)
Frame = -3
Query: 311 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
PK +THGEVERRIVSQLLTLMDGLKQR+HVIVMAATNRPNS+D ALRRFGRFDREVDIG
Sbjct: 620 PKERETHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDAALRRFGRFDREVDIG 441
Query: 371 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
IPDATGRLEIL+IHTKNMKLADDVDLEQVA+ETHGHVGAD+AALCSEAALQ IR+KMDLI
Sbjct: 440 IPDATGRLEILRIHTKNMKLADDVDLEQVASETHGHVGADVAALCSEAALQQIREKMDLI 261
Query: 431 DLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQ 490
DLED+TIDAEV++SLAVTMDDFRWAL +SNPSALRET VEVP V+WED+GGLE+VK+ELQ
Sbjct: 260 DLEDDTIDAEVLDSLAVTMDDFRWALGKSNPSALRETCVEVPNVSWEDVGGLENVKKELQ 81
Query: 491 ELVQYPVEHPDKFLKFGMTPSKGVLF 516
ELVQYPVEHP+KFLKFGMTPSKGVLF
Sbjct: 80 ELVQYPVEHPEKFLKFGMTPSKGVLF 3
Score = 82.0 bits (201), Expect(2) = e-124, Method: Compositional matrix adjust.
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -1
Query: 274 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE+
Sbjct: 730 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRER 605
Score = 85.9 bits (211), Expect(2) = 6e-23, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 63/97 (64%)
Frame = -3
Query: 599 RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK 658
R+++Q+LT MDG+ + +V ++ ATNRP+ +D A+ R GR D+ + I +PD R+ IL+
Sbjct: 584 RIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDAALRRFGRFDREVDIGIPDATGRLEILR 405
Query: 659 ANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
+ + +A DVDLE +A T+G GAD+ +C A
Sbjct: 404 IHTKNMKLADDVDLEQVASETHGHVGADVAALCSEAA 294
Score = 40.8 bits (94), Expect(2) = 6e-23, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Frame = -1
Query: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI 582
+++ GESE+N+R+ F++A + AP ++F DELD+I
Sbjct: 730 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 623
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -3
Query: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
V ++D+GG +++E+V+ P+ HP F G+ P +G+L
Sbjct: 131 VSWEDVGGLENVKKELQELVQYPVEHPEKFLKFGMTPSKGVLF 3
>03022
Length = 2255
Score = 250 bits (638), Expect(2) = 9e-79, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 222/401 (55%), Gaps = 25/401 (6%)
Frame = +2
Query: 323 RIVSQLLTLMDGLKQRA-HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
RIVS+L + +D L+++ +V+V+A T+R ++ LR GRF E +G+PD R +L
Sbjct: 899 RIVSELGSCIDELQEKPENVVVVATTSRIEAVHRDLRIPGRF-MEKALGMPDEGSREGLL 1075
Query: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-------- 433
Q L+ + L+ +A T G V DL AL A A R+ +L E
Sbjct: 1076 QRLCSRYTLSPHLKLKTLARLTPGFVAGDLRALVHGAFSTAFRRVRNLYRTESAESSTRR 1255
Query: 434 --------------DETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
D + + ++A+T +DF AL ++ P+A RE VP TWED+
Sbjct: 1256 HPFPPLPPAHLTGKDIXPQEQDIAAVALTEEDFMGALKKAQPAAKREGFATVPTTTWEDV 1435
Query: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
G L +V+ +L++ + + P+ FG+ + G++ GPPGCGKTL+AKA+ANE NF
Sbjct: 1436 GALSNVRAQLKDSILCRIHDPEVSSAFGLPTNSGIILVGPPGCGKTLVAKAMANEAGLNF 1615
Query: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIXXXXXXXXXXXXXXXDR 599
I IKGPELL + GESE N+RE FDKA+ APC++FFDE+D++
Sbjct: 1616 IYIKGPELLDKYVGESERNLREKFDKAQACAPCLIFFDEMDTLCSNRQNNDGSNVGKS-- 1789
Query: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
V NQ+L MDG + V+++GATN + +DPA+ RPGR D+ I+I LPD R+ IL+A
Sbjct: 1790 VTNQLLALMDGCGERSQVYVMGATNIIENVDPALQRPGRFDRKIFIGLPDTDGRLDILRA 1969
Query: 660 NLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLA 698
+ K D++ LA+ T GFSGADL + A +A
Sbjct: 1970 LTKGGSQRKLESCDMQQLAQDTEGFSGADLKHLVNEASTIA 2092
Score = 63.2 bits (152), Expect(2) = 9e-79, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Frame = +1
Query: 193 DEEESLNEVGYDDIGGCRKQLAQIKEMVE--LPLRHPALFKAIGVKPPRGILLYGPPGTG 250
D E S+ DD GG K LA++ E L + A K R LLYGP G+G
Sbjct: 496 DGEPSIPTATLDDFGGSNKLLAELDSDFEEILYSDYCQYASACDQKACRRYLLYGPRGSG 675
Query: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
K +A +A + ++S ++G+SE +R F++A AP ++++++++ +A
Sbjct: 676 KRFLAECIAGQLKLPLLKPKINTLISGVSGDSEQRVRDLFDQAVSQAPCVLYLEDIECLA 855
Query: 311 PKREKTHG 318
P+++ G
Sbjct: 856 PRQDTPXG 879
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 167/284 (58%), Gaps = 3/284 (1%)
Frame = +2
Query: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
+ +P + + ++ ++D+G AQ+K+ + + P + A G+ GI+L
Sbjct: 1370 KAQPAAKREGFATVPTTTWEDVGALSNVRAQLKDSILCRIHDPEVSSAFGLPTNSGIILV 1549
Query: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
GPPG GKTL+A+A+ANE G F I GPE++ K GESE NLR+ F++A+ AP +IF D
Sbjct: 1550 GPPGCGKTLVAKAMANEAGLNFIYIKGPELLDKYVGESERNLREKFDKAQACAPCLIFFD 1729
Query: 305 ELDAIAPKREKTHGE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF 363
E+D + R+ G V + + +QLL LMDG +R+ V VM ATN ++DPAL+R GRF
Sbjct: 1730 EMDTLCSNRQNNDGSNVGKSVTNQLLALMDGCGERSQVYVMGATNIIENVDPALQRPGRF 1909
Query: 364 DREVDIGIPDATGRLEILQIHTK--NMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
DR++ IG+PD GRL+IL+ TK + + + D++Q+A +T G GADL L +EA+
Sbjct: 1910 DRKIFIGLPDTDGRLDILRALTKGGSQRKLESCDMQQLAQDTEGFSGADLKHLVNEASTI 2089
Query: 422 AIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALR 465
A+++ M D+ + VT D F AL PS ++
Sbjct: 2090 ALKESM-----ADQAWREDSHREYVVTGDQFTRALQLVKPSVMK 2206
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Frame = +1
Query: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGG----LEDVKRELQELV-----QYPV 497
+ DD L PS +P T +D GG L ++ + +E++ QY
Sbjct: 463 MKTDDLDMDLPDGEPS--------IPTATLDDFGGSNKLLAELDSDFEEILYSDYCQYAS 618
Query: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
K + L YGP G GK LA+ IA + + + K L++ G+SE
Sbjct: 619 ACDQK-------ACRRYLLYGPRGSGKRFLAECIAGQLKLPLLKPKINTLISGVSGDSEQ 777
Query: 558 NVREIFDKARQAAPCVLFFDELDSI 582
VR++FD+A APCVL+ ++++ +
Sbjct: 778 RVRDLFDQAVSQAPCVLYLEDIECL 852
>06766
Length = 976
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/139 (73%), Positives = 114/139 (82%), Gaps = 2/139 (1%)
Frame = +2
Query: 638 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 697
RLDQLIYIPLPD+KSR AILKANLRKSP+AK+VDL ++AK+T GFSGADLTEICQRACKL
Sbjct: 2 RLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKL 181
Query: 698 AXXXXXXXXXXXXXXXQTNP-SAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYE 756
A N SAM+++E+DPVPEI R HFEEAM+FARRSVSDNDIRKYE
Sbjct: 182 AIRQAIEAEIRREKDRAENQNSAMDMDEEDPVPEITRAHFEEAMKFARRSVSDNDIRKYE 361
Query: 757 MFAQTLQQSRGFG-SFRFP 774
MFAQTLQQSRGFG +FRFP
Sbjct: 362 MFAQTLQQSRGFGQNFRFP 418
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Frame = +2
Query: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
R D+ + I +PD R IL+ + + LA +VDL +A T G GADL +C A
Sbjct: 2 RLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKL 181
Query: 422 AIRKKMDLIDLEDETIDAEVMNSLAVTMDD 451
AIR+ ++ ++ E AE NS A+ MD+
Sbjct: 182 AIRQAIE-AEIRREKDRAENQNS-AMDMDE 265
>07243
Length = 1112
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 164/275 (59%)
Frame = +1
Query: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
R+++D L+ T A M +L + R+ + +P + + VT+ IGGL
Sbjct: 58 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDVTYSAIGGLT 225
Query: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
+ REL+E+++ P+ +P+ FL+ G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 226 EQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 405
Query: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIXXXXXXXXXXXXXXXDRVINQ 603
++ + GES +RE+F+ AR PC++F DE+D+I R + +
Sbjct: 406 SSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 585
Query: 604 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
+L +MDG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK +
Sbjct: 586 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALI 765
Query: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
++D E + K+++ F+GADL +C A A
Sbjct: 766 IAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFA 870
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 156/253 (61%), Gaps = 3/253 (1%)
Frame = +1
Query: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
E +P+ E +V Y IGG +Q+ +++E++ELPL +P LF +G+ PP+G LLY
Sbjct: 148 EVDPLVYNMSHEDPGDVTYSAIGGLTEQIRELREVIELPLLNPELFLRVGITPPKGCLLY 327
Query: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
GPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 328 GPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMD 507
Query: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
E+DAI +R E T + E +R + +LL MDG V ++ ATNRP+++DPAL R G
Sbjct: 508 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPG 687
Query: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
R DR+++I +P+ RLEIL+IH + ++D E + + GADL +C+EA L
Sbjct: 688 RLDRKIEIPLPNEQARLEILKIHALIIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLF 867
Query: 422 AIRKKMDLIDLED 434
AIR + + + ED
Sbjct: 868 AIRAEREYVIQED 906
>01642
Length = 1406
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 143/226 (63%), Gaps = 3/226 (1%)
Frame = -1
Query: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+ T
Sbjct: 998 YSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 819
Query: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
A F + G E + K GE +R F A++NAPAIIFIDE+DAIA KR +R
Sbjct: 818 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 639
Query: 323 ---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 638 EVQRILLELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 459
Query: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
I T M ++++VDLE GAD+ A+C EA +QA+R+
Sbjct: 458 IFSTITGKMNISEEVDLEDYVARPDKISGADINAICQEAGMQAVRE 321
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 171/368 (46%), Gaps = 28/368 (7%)
Frame = -1
Query: 355 PALRRFGRFDREVD-----IGIPDATGRLEIL----------------QIHTKNMKLADD 393
P+ R GRF RE+ G+P +GR+ Q HT+
Sbjct: 1397 PSQXRRGRFVREIQEASETAGVPGGSGRVHQG*AEEPEEGVPARPGGGQAHTERASRHRA 1218
Query: 394 VDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFR 453
V + H + + LC+ R +I
Sbjct: 1217 VSGGRRPKHRHCRLNYRVQLLCAYFVYNRPRASQAVIQCCSPQTQQ-------------- 1080
Query: 454 WALSQSNPSALRETVVE-------VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKF 506
S PS R T V P + DIGG++ K+E++E V+ P+ H + + +
Sbjct: 1079 --CSCGRPSPQRLTAVSQCFKLMRSPT*XYSDIGGMDIQKQEVREAVELPLTHFELYKQI 906
Query: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
G+ P +GVL YGPPGCGKT+LAKA+A+ A FI + G E + + GE VR++F A
Sbjct: 905 GIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 726
Query: 567 RQAAPCVLFFDELDSIXXXXXXXXXXXXXXXDRVINQILTEMDGMSTKKNVFIIGATNRP 626
++ AP ++F DE+D+I R++ ++L +MDG NV +I ATNR
Sbjct: 725 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTVNVKVIMATNRA 546
Query: 627 DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGAD 686
D +DPA+LRPGRLD+ I PLPD + + I K ++++VDLE + SGAD
Sbjct: 545 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITGKMNISEEVDLEDYVARPDKISGAD 366
Query: 687 LTEICQRA 694
+ ICQ A
Sbjct: 365 INAICQEA 342
>02582
Length = 1101
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 179/349 (51%), Gaps = 34/349 (9%)
Frame = +3
Query: 446 AVTMDDFRWALSQSNPSALR--ETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
+T D AL PS R + +V+ V W DIGGL+ VK ++++ V++P+ +PD F
Sbjct: 42 GITRADMEAALLTFKPSMQRGVDCIVDARSVPWTDIGGLDLVKLQIRQAVEWPLLYPDTF 221
Query: 504 LKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
G+ +KGVL YGPPGCGKT LA+A A C F+S+ +L + + G++E + E F
Sbjct: 222 QALGLPLTKGVLLYGPPGCGKTTLAQAAATACHVTFLSLSCAQLYSPYVGDAEKKISETF 401
Query: 564 DKARQAAPCVLFFDELDSIXXXXXXXXXXXXXXXDRVINQILTEMDGMSTK--------- 614
KAR AP +LF DE+D+I +RV++ +L EMDG+ +
Sbjct: 402 QKARALAPSILFLDEMDAI-VGKRSDSSLGSGVSERVLSALLNEMDGIGVRLDDKSDSRE 578
Query: 615 -----------------------KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 651
++V ++ ATNRPD++DPA+LRPGR+D+LIY+P PD +
Sbjct: 579 MEIEGSSDHTPQVRQHAVKEAHDRHVLVVAATNRPDMLDPALLRPGRMDRLIYVPPPDVQ 758
Query: 652 SRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAXXXXXXXXXXXXX 711
R+ + RK P+ KDVD++ LA +T G++GAD+ +C LA
Sbjct: 759 GRLQSFTIHTRKMPLGKDVDVKQLADLTAGYTGADIKTLCNEVGLLA------------- 899
Query: 712 XXQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQ 760
++E + +DHF A++ + S+S + M+ Q
Sbjct: 900 ----------LKESMSAECVNQDHFLNAIKTRKPSLSADSSEVETMYKQ 1016
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 159/297 (53%), Gaps = 34/297 (11%)
Frame = +3
Query: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
V + DIGG QI++ VE PL +P F+A+G+ +G+LLYGPPG GKT +A+A A
Sbjct: 129 SVPWTDIGGLDLVKLQIRQAVEWPLLYPDTFQALGLPLTKGVLLYGPPGCGKTTLAQAAA 308
Query: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH-- 317
F ++ ++ S G++E + + F++A AP+I+F+DE+DAI KR +
Sbjct: 309 TACHVTFLSLSCAQLYSPYVGDAEKKISETFQKARALAPSILFLDEMDAIVGKRSDSSLG 488
Query: 318 GEVERRIVSQLLTLMDGL-------------------------KQRA-------HVIVMA 345
V R++S LL MDG+ +Q A HV+V+A
Sbjct: 489 SGVSERVLSALLNEMDGIGVRLDDKSDSREMEIEGSSDHTPQVRQHAVKEAHDRHVLVVA 668
Query: 346 ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG 405
ATNRP+ +DPAL R GR DR + + PD GRL+ IHT+ M L DVD++Q+A+ T G
Sbjct: 669 ATNRPDMLDPALLRPGRMDRLIYVPPPDVQGRLQSFTIHTRKMPLGKDVDVKQLADLTAG 848
Query: 406 HVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 462
+ GAD+ LC+E L A++ E++ AE +N D F A+ PS
Sbjct: 849 YTGADIKTLCNEVGLLALK----------ESMSAECVNQ-----DHFLNAIKTRKPS 974
>23766
Length = 1463
Score = 168 bits (425), Expect(2) = 2e-48, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 127/196 (64%), Gaps = 3/196 (1%)
Frame = +1
Query: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
G + P+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K G+ +R+ F A
Sbjct: 142 GNQAPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 321
Query: 294 EKNAPAIIFIDELDAIAPKREKTHGEVER---RIVSQLLTLMDGLKQRAHVIVMAATNRP 350
E++AP+I+FIDE+DA+ KR +++ ER R + +LL +DG R V V+ ATNR
Sbjct: 322 EEHAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 501
Query: 351 NSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGAD 410
++DPAL R GR DR+++ +PD + I IHT M LA DV+++ GAD
Sbjct: 502 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAGDVNIDDYVMSKDDLSGAD 681
Query: 411 LAALCSEAALQAIRKK 426
+ A+C+EA L A+R++
Sbjct: 682 IKAICTEAGLLALRER 729
Score = 44.3 bits (103), Expect(2) = 2e-48, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVK 236
Y DIGG Q+ +IKE VELPL HP ++ +G+K
Sbjct: 50 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIK 151
Score = 151 bits (382), Expect(2) = 3e-42, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 114/192 (59%)
Frame = +1
Query: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
G KGV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+ + G+ VRE+F A
Sbjct: 142 GNQAPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 321
Query: 567 RQAAPCVLFFDELDSIXXXXXXXXXXXXXXXDRVINQILTEMDGMSTKKNVFIIGATNRP 626
+ AP ++F DE+D++ R + ++L ++DG ++ +V +I ATNR
Sbjct: 322 EEHAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 501
Query: 627 DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGAD 686
+ +DPA++RPGR+D+ I PLPDEK++ I + + +A DV+++ + SGAD
Sbjct: 502 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAGDVNIDDYVMSKDDLSGAD 681
Query: 687 LTEICQRACKLA 698
+ IC A LA
Sbjct: 682 IKAICTEAGLLA 717
Score = 39.7 bits (91), Expect(2) = 3e-42, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +2
Query: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSK 512
+ PQ T+ DIGGL+ +E++E V+ P+ HP+ + + G+ K
Sbjct: 32 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKHQK 160
>19129
Length = 1020
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 151/266 (56%), Gaps = 9/266 (3%)
Frame = +1
Query: 398 QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLA----VTMDDFR 453
Q+ E +VG + + + L + + + D+ ID MNS+ V + +
Sbjct: 232 QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID---MNSVTPNCRVALRNDS 402
Query: 454 WALSQSNPSALRETVV-----EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGM 508
+ L + P+ + V +VP T+E +GGL+ +E++E+++ PV+HP+ F G+
Sbjct: 403 YVLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGI 582
Query: 509 TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 568
KGVL YGPPG GKTLLA+A+A+ + FI + G EL+ + GE VRE+F AR+
Sbjct: 583 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARE 762
Query: 569 AAPCVLFFDELDSIXXXXXXXXXXXXXXXDRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
AP ++F DE+DSI R + ++L ++DG K+N+ +I ATNR DI
Sbjct: 763 HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEPKQNIKVIMATNRIDI 942
Query: 629 IDPAILRPGRLDQLIYIPLPDEKSRV 654
+D A+LRPGR+D+ I P P+E++R+
Sbjct: 943 LDSALLRPGRIDRKIEFPPPNEEARL 1020
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 124/180 (68%), Gaps = 4/180 (2%)
Frame = +1
Query: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Y+ +GG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAVA+ T
Sbjct: 484 YEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 663
Query: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-EKTHG--- 318
F ++G E++ K GE +R+ F A ++AP+IIF+DE+D+I R E G
Sbjct: 664 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 843
Query: 319 EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRL 378
EV+R ++ +LL +DG + + ++ V+ ATNR + +D AL R GR DR+++ P+ RL
Sbjct: 844 EVQRTML-ELLNQLDGFEPKQNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 1020
>07247
Length = 1753
Score = 140 bits (352), Expect(2) = 2e-38, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 115/191 (60%), Gaps = 3/191 (1%)
Frame = -2
Query: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
PGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+DE+
Sbjct: 1407 PGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARLIREMFAFARDHEPCIIFMDEI 1228
Query: 307 DAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF 363
DAI +R E T + E +R + +LL MDG V ++ ATNRP+++DPAL R GR
Sbjct: 1227 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRL 1048
Query: 364 DREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAI 423
DR+++I +P+ RLEIL+IH + ++D E V + GADL +C+EA + AI
Sbjct: 1047 DRKIEISLPNEQARLEILKIHANPIAKHGEIDWEAVVKLSEDFNGADLRNVCTEAGMFAI 868
Query: 424 RKKMDLIDLED 434
R + D + ED
Sbjct: 867 RAERDYVIEED 835
Score = 38.5 bits (88), Expect(2) = 2e-38, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = -1
Query: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGV 235
+P+ E ++ ++ IGG +Q+ +++E++ELPL +P LF+ +G+
Sbjct: 1585 DPLVYNMSVEDPGDITFNQIGGLGEQVRELREVIELPLLNPELFQRVGI 1439
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 11/201 (5%)
Frame = -2
Query: 509 TPSKGVLFYGP---------PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 559
TPS ++ P PG GKTLLA+A+A++ NF+ + ++ + GES +
Sbjct: 1467 TPSCSSVWASPA*RLPAVRTPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARLI 1288
Query: 560 REIFDKARQAAPCVLFFDELDSIXXXXXXXXXXXXXXXDRVINQILTEMDGMSTKKNVFI 619
RE+F AR PC++F DE+D+I R + ++L +MDG V +
Sbjct: 1287 REMFAFARDHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKM 1108
Query: 620 IGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK--DVDLEFLAK 677
I ATNRPD +DPA+LRPGRLD+ I I LP+E++R+ ILK + +P+AK ++D E + K
Sbjct: 1107 IMATNRPDTLDPALLRPGRLDRKIEISLPNEQARLEILK--IHANPIAKHGEIDWEAVVK 934
Query: 678 MTNGFSGADLTEICQRACKLA 698
++ F+GADL +C A A
Sbjct: 933 LSEDFNGADLRNVCTEAGMFA 871
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Frame = -1
Query: 446 AVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLK 505
V + R +S +P +V + +T+ IGGL + REL+E+++ P+ +P+ F +
Sbjct: 1627 VVAIKKARSWISGMDPLVYNMSVEDPGDITFNQIGGLGEQVRELREVIELPLLNPELFQR 1448
Query: 506 FGMTPSKGVLFYGPP--------GCGKT----LLAKAIANEC 535
G+T K P GCG++ LL + C
Sbjct: 1447 VGITRLKAACCSDPRYWQDXAG*GCGQSAGL*LLEGGVQCHC 1322
>12235
Length = 1749
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Frame = +1
Query: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIXXXXXXXXXXX 593
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++
Sbjct: 1 EANVPFITVSGSEFLEMFVGVGPSRVRDMFATARKNAPCILFVDEIDAVGRKRSGRNFGG 180
Query: 594 XXXXDRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
+ +NQ+L EMDG +T+ V ++ ATNR DI+D A+LRPGR D+ I++PLPD K R
Sbjct: 181 QSEQENTLNQLLVEMDGFNTQTGVVVLAATNRVDILDAALLRPGRFDRQIFVPLPDIKXR 360
Query: 654 VAILKANL--RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
+I K +L K+ V K+ +A +T GFSGAD+ +C A +A
Sbjct: 361 ASIFKVHLDPLKTEVNKNDLARKMAALTPGFSGADIANVCNEAALIA 501
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 9/262 (3%)
Frame = +1
Query: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH--GEVER- 322
F ++G E + G S +R F A KNAP I+F+DE+DA+ KR + G+ E+
Sbjct: 16 FITVSGSEFLEMFVGVGPSRVRDMFATARKNAPCILFVDEIDAVGRKRSGRNFGGQSEQE 195
Query: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
++QLL MDG + V+V+AATNR + +D AL R GRFDR++ + +PD R I +
Sbjct: 196 NTLNQLLVEMDGFNTQTGVVVLAATNRVDILDAALLRPGRFDRQIFVPLPDIKXRASIFK 375
Query: 383 IHTKNMKL-ADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAE 440
+H +K + DL ++A T G GAD+A +C+EAAL A R DL
Sbjct: 376 VHLDPLKTEVNKNDLARKMAALTPGFSGADIANVCNEAALIAAR---DL----------- 513
Query: 441 VMNSLAVTMDDFRWALSQSNPSALRETVVEVPQ----VTWEDIGGLEDVKRELQELVQYP 496
+ ++ M F A+ + ++T V P+ V + + G + +
Sbjct: 514 ---NTSIHMTHFEQAIERVVAGLEKKTQVLQPEEKKTVAYHEAG---------HAVAGWY 657
Query: 497 VEHPDKFLKFGMTPSKGVLFYG 518
+EH D LK + P L Y
Sbjct: 658 LEHADPLLKVSIIPRGKGLGYA 723
>00810
Length = 1431
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 120/217 (55%), Gaps = 3/217 (1%)
Frame = -3
Query: 482 LEDVKRELQELVQYPVEHPDKFLKFGM-TPSKGVLFYGPPGCGKTLLAKAIANECQANFI 540
LEDV ++++E V P + D F + P KGVL +GPPGCGKT++AKA A A FI
Sbjct: 1429 LEDVIQDVKETVILPFKRADLFRHSSLLQPPKGVLLHGPPGCGKTMIAKATAKAAGARFI 1250
Query: 541 SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIXXXXXXXXXXXXXXXDRV 600
+++ L+ W+GES+ +F A + P ++F DE+DS +
Sbjct: 1249 NLQVSSLVDKWYGESQKRAEAVFSLAIKLQPTIIFIDEIDSFLRSRTSTDHEATAM---I 1079
Query: 601 INQILTEMDGMSTKKN--VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK 658
Q ++ DG+ T + V ++GATNRP +D AILR R+ + +I LP R +I
Sbjct: 1078 KTQFMSFWDGLMTDPDCRVMVMGATNRPQDVDAAILR--RMPSMFHIGLPGPAQRRSIFN 905
Query: 659 ANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
L K + ++ + LA+MT+GFSG+D+ E+C+ A
Sbjct: 904 LILSKERIDA-LNYDELAEMTDGFSGSDIREVCRAAA 797
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 112/213 (52%), Gaps = 3/213 (1%)
Frame = -3
Query: 216 IKEMVELPLRHPALFKAIGV-KPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI 274
+KE V LP + LF+ + +PP+G+LL+GPPG GKT+IA+A A GA F + +
Sbjct: 1408 VKETVILPFKRADLFRHSSLLQPPKGVLLHGPPGCGKTMIAKATAKAAGARFINLQVSSL 1229
Query: 275 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG 334
+ K GES+ F A K P IIFIDE+D+ R T E I +Q ++ DG
Sbjct: 1228 VDKWYGESQKRAEAVFSLAIKLQPTIIFIDEIDSFLRSRTSTDHEATAMIKTQFMSFWDG 1049
Query: 335 LKQ--RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLAD 392
L V+VM ATNRP +D A+ R R IG+P R I + ++ D
Sbjct: 1048 LMTDPDCRVMVMGATNRPQDVDAAILR--RMPSMFHIGLPGPAQRRSIFNLILSKERI-D 878
Query: 393 DVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
++ +++A T G G+D+ +C AA+ + +
Sbjct: 877 ALNYDELAEMTDGFSGSDIREVCRAAAVATVHE 779
>20270
Length = 542
Score = 92.8 bits (229), Expect(2) = 1e-25, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Frame = -3
Query: 510 PSKGVLFYGPPGCGKTLLAKAIANECQ-ANFISIKGPELLTMWFGESEANVREIFDKARQ 568
P +G+L YGPPG GK+ LAKA+A E + F S+ +L++ W GESE V+ +F AR+
Sbjct: 384 PWRGILLYGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGESEKLVKTLFQLARE 205
Query: 569 AAPCVLFFDELDSIXXXXXXXXXXXXXXXDRVINQILTEMDGMST-KKNVFIIGATNRPD 627
P ++F DE+D++ R+ + L +M G+ V ++GATN P
Sbjct: 204 NQPSIIFIDEVDALCGSRSENESESAR---RIKTEFLVQMQGVGNDNTGVLVLGATNIPW 34
Query: 628 IIDPAILR 635
+D AI R
Sbjct: 33 TLDSAIRR 10
Score = 42.7 bits (99), Expect(2) = 1e-25, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = -1
Query: 462 SALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
SA+R VVE P V W+D+ GL K L+E V PV+ P F
Sbjct: 524 SAVRSHVVEKPNVRWDDVAGLNGAKDALKEAVILPVKFPHLF 399
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Frame = -3
Query: 236 KPPRGILLYGPPGTGKTLIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAE 294
KP RGILLYGPPGTGK+ +A+AVA E + FF ++ +++SK GESE ++ F+ A
Sbjct: 387 KPWRGILLYGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGESEKLVKTLFQLAR 208
Query: 295 KNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-KQRAHVIVMAATNRPNSI 353
+N P+IIFIDE+DA+ R + E RRI ++ L M G+ V+V+ ATN P ++
Sbjct: 207 ENQPSIIFIDEVDALCGSRSENESESARRIKTEFLVQMQGVGNDNTGVLVLGATNIPWTL 28
Query: 354 DPALRRFGRFD 364
D A+RR RF+
Sbjct: 27 DSAIRR--RFE 1
>02191
Length = 1137
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Frame = +2
Query: 716 NPSA-MEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGF-GSFRF 773
NP A ME E+ DPVPEI R HFEEAM+FARRSV+DNDIRKYEMFAQTLQQSRGF G+FRF
Sbjct: 29 NPDADMETEDYDPVPEISRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGGNFRF 208
Query: 774 P 774
P
Sbjct: 209 P 211
>25671
Length = 441
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 6/108 (5%)
Frame = +2
Query: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
TGKT++A+AVA E G FF ++ + +K GESE +R FE A AP+ IFIDE+D+
Sbjct: 2 TGKTMLAKAVATECGTTFFNVSTSSLANKYRGESEKLVRLLFEMAHFYAPSTIFIDEIDS 181
Query: 309 IAPKR-EKTHGEVERRIVSQLLTLMDGL-----KQRAHVIVMAATNRP 350
I KR + E RR+ S+LL MDG+ V+V+AATN P
Sbjct: 182 ICSKRGSDSEHEASRRVKSELLVQMDGVGVTNDDPSKAVMVLAATNFP 325
Score = 67.4 bits (163), Expect(2) = 2e-14, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Frame = +2
Query: 523 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI 582
GKT+LAKA+A EC F ++ L + GESE VR +F+ A AP +F DE+DSI
Sbjct: 5 GKTMLAKAVATECGTTFFNVSTSSLANKYRGESEKLVRLLFEMAHFYAPSTIFIDEIDSI 184
Query: 583 XXXXXXXXXXXXXXXDRVINQILTEMDGMST-----KKNVFIIGATNRP 626
RV +++L +MDG+ K V ++ ATN P
Sbjct: 185 CSKRGSDSEHEASR--RVKSELLVQMDGVGVTNDDPSKAVMVLAATNFP 325
Score = 30.8 bits (68), Expect(2) = 2e-14, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 629 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
ID A+ R RL++ IYIPLP + R +L+ NLR+
Sbjct: 333 IDEALRR--RLEKRIYIPLPSAEGRRVLLEINLRE 431
>26408
Length = 463
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/48 (66%), Positives = 43/48 (89%)
Frame = +1
Query: 215 QIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
+IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+ARAVA+ T
Sbjct: 295 RIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 438
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = +1
Query: 487 RELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN 538
+ ++E+++ PV+HP+ F G+ KGVL YGPPG GKTLLA+A+A+ + +
Sbjct: 292 QRIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTRVH 447
>17843
Length = 772
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Frame = +1
Query: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGM-TPSKGVLFYGPPGCGKTLLAKAIANE 534
W+ + E++K L + DK + + + ++ +L +GPPG GKT L KA+A++
Sbjct: 76 WDSLVFDENIKERLLNYATTTLLFSDKHVNSSIISWNRVILLHGPPGTGKTTLCKALAHK 255
Query: 535 ----------CQANFISIKGPELLTMWFGESEANVREIFDKAR------QAAPCVLFFDE 578
C + I L + WF ES V ++F + + CVL DE
Sbjct: 256 LCIRLSHRFSC-GQLVEINSHSLFSKWFSESGKLVTKMFQRLHDYMVDPELLVCVL-IDE 429
Query: 579 LDSIXXXXXXXXXXXX-XXXDRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
++S+ RV+N +LT++D + N I+ +N ID A +
Sbjct: 430 VESLTAARKSCLNGNEPSDAIRVVNAVLTQIDQLKKFANCLILTTSNITGAIDLAFVDRA 609
Query: 638 RLDQLIYIPLP 648
+ Q I P P
Sbjct: 610 DIKQYIGPPTP 642
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Frame = +1
Query: 239 RGILLYGPPGTGKTLIARAVANE---------TGAFFFLINGPEIMSKLAGESESNLRKA 289
R ILL+GPPGTGKT + +A+A++ + IN + SK ES + K
Sbjct: 187 RVILLHGPPGTGKTTLCKALAHKLCIRLSHRFSCGQLVEINSHSLFSKWFSESGKLVTKM 366
Query: 290 FEE-----AEKNAPAIIFIDELDAIAPKREKTHGEVE----RRIVSQLLTLMDGLKQRAH 340
F+ + + IDE++++ R+ E R+V+ +LT +D LK+ A+
Sbjct: 367 FQRLHDYMVDPELLVCVLIDEVESLTAARKSCLNGNEPSDAIRVVNAVLTQIDQLKKFAN 546
Query: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
+++ +N +ID A R D + IG P
Sbjct: 547 CLILTTSNITGAIDLAF--VDRADIKQYIGPP 636
>25936
Length = 459
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Frame = +2
Query: 363 FDREVD-IGIPDATGRLEILQIHTKNMKLA------DDVDLEQVANETHGHVGADLAALC 415
F +EV I PD GR EILQ K+ + +DL+ VA+ T G V D+ L
Sbjct: 8 FVQEVTTIKPPDKAGRQEILQCTLKSHSTVCARSTLERLDLDSVASRTEGFVARDIQTLV 187
Query: 416 SEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVP-QV 474
+ +A+ ++ T AE N++ + DF AL P A+R + ++
Sbjct: 188 N----RALHARLA------ATPSAE-SNTVILQQTDFDTALEGFKPLAIRNVHLHTSGEL 334
Query: 475 TWEDIGGLEDVKRELQELVQYPVEHPD 501
W D+GGLE VK L E +Q+P ++P+
Sbjct: 335 GWSDVGGLEGVKSSLIETLQWPSKYPE 415
>02194
Length = 1891
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Frame = -1
Query: 227 PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNL 286
P + G+ RG LLYGPPG GK+ A+A ++N E G S+ L
Sbjct: 1531 PRWYMDRGIPYRRGYLLYGPPGCGKSSYIMALAGALDYNICVLNLSE-----KGLSDDRL 1367
Query: 287 RKAFEEAEKNAPAIIFIDELDAIAPKREKT------HGEVERRIVSQLLTLMDGLKQRAH 340
A + +II ++++DA R+ + + + R S LL +DG+
Sbjct: 1366 NHLLTVAPEQ--SIILLEDVDAAFLSRDLSKENPAMYQGMGRLTFSGLLNALDGVASAEA 1193
Query: 341 VIVMAATNRPNSIDPALRRFGRFD 364
IV TN + +DPAL R GR D
Sbjct: 1192 RIVFMTTNYLDRLDPALIRPGRVD 1121
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = -1
Query: 500 PDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 559
P ++ G+ +G L YGPPGCGK+ A+A N + E G S+ +
Sbjct: 1531 PRWYMDRGIPYRRGYLLYGPPGCGKSSYIMALAGALDYNICVLNLSEK-----GLSDDRL 1367
Query: 560 REIFDKARQAAPCVLFFDELDS--IXXXXXXXXXXXXXXXDRV-INQILTEMDGMSTKKN 616
+ A + + ++ +++D+ + R+ + +L +DG+++ +
Sbjct: 1366 NHLLTVAPEQS--IILLEDVDAAFLSRDLSKENPAMYQGMGRLTFSGLLNALDGVASAEA 1193
Query: 617 VFIIGATNRPDIIDPAILRPGRLD 640
+ TN D +DPA++RPGR+D
Sbjct: 1192 RIVFMTTNYLDRLDPALIRPGRVD 1121
>29846
Length = 451
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 643 IYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
I I +P R I LRK P+A D+DL++L+ +T G+ GAD+ +C A
Sbjct: 142 ILISVPTSIQRRQIFNFCLRKLPLASDLDLDWLSSVTAGYVGADIKAVCASA 297
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = +1
Query: 366 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEA 418
E+ I +P + R +I + + LA D+DL+ +++ T G+VGAD+ A+C+ A
Sbjct: 139 EILISVPTSIQRRQIFNFCLRKLPLASDLDLDWLSSVTAGYVGADIKAVCASA 297
>05247
Length = 375
Score = 33.9 bits (76), Expect(2) = 8e-04, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 662 RKSPVAKDVDLEFLAKMTNGFSGADLTEIC 691
+K P+ KDVD++ LA +T G +GAD+ +C
Sbjct: 73 KKMPLGKDVDVKQLADLTAG*TGADIKTLC 162
Score = 27.7 bits (60), Expect(2) = 8e-04, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 638 RLDQLIYIPLPDEKSRVAILKANLRK 663
R+D+LIY+P PD + R+ + RK
Sbjct: 2 RMDRLIYVPPPDVQGRLQSFTIHTRK 79
Score = 33.1 bits (74), Expect(2) = 0.002, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 386 KNMKLADDVDLEQVANETHGHVGADLAALC 415
K M L DVD++Q+A+ T G GAD+ LC
Sbjct: 73 KKMPLGKDVDVKQLADLTAG*TGADIKTLC 162
Score = 26.6 bits (57), Expect(2) = 0.002, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 362 RFDREVDIGIPDATGRLEILQIHTK 386
R DR + + PD GRL+ IHT+
Sbjct: 2 RMDRLIYVPPPDVQGRLQSFTIHTR 76
>08000
Length = 343
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 662 RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
++ P+ KDVD++ LA +T G++GAD+ +C C
Sbjct: 15 QEMPLGKDVDVKQLADLTAGYTGADIKTLCNEGC 116
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 385 TKNMKLADDVDLEQVANETHGHVGADLAALCSEA 418
T+ M L DVD++Q+A+ T G+ GAD+ LC+E
Sbjct: 12 TQEMPLGKDVDVKQLADLTAGYTGADIKTLCNEG 113
>01279
Length = 2183
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = -3
Query: 239 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESE---SNLRKAF 290
R +LL GPPGTGKT IA A+A E G F + G E+ S ++E N R+A
Sbjct: 1914 RAVLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEVYSSEIKKTEVLMENFRRAI 1744
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 503 FLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESE 556
+K + VL GPPG GKT +A AIA E + F + G E+ + ++E
Sbjct: 1941 LIKTKKMAGRAVLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEVYSSEIKKTE 1774
>15498
Length = 769
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = -1
Query: 216 IKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM 275
+ E LPL P++ + + + ILL GP G+GK ++ A+ NE GA F ++ +
Sbjct: 247 VTEFGILPLGSPSVHEQAPLT--KSILLAGPRGSGKKMLVHALCNEVGANLFDLSPANLA 74
Query: 276 SKLAGE 281
K G+
Sbjct: 73 GKYPGK 56
>19561
Length = 474
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = -1
Query: 242 LLYGPPGTGKTLIARAVANETGAFFFLINGP-----EIMSKLAGESESNLRKAFEEAEKN 296
LL GPPG GKT +A VA G +N E+ S E+ + +R +
Sbjct: 369 LLCGPPGLGKTTLAHIVAKHAGYNVVEMNASDDRSVEVFSNKI-EAATQMRAVMGADPR- 196
Query: 297 APAIIFIDELDA 308
P + IDE+D
Sbjct: 195 -PNCLIIDEIDG 163
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -1
Query: 512 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE--LLTMWFGESEANVREIFDKARQA 569
K L GPPG GKT LA +A N + + + + ++ + EA +
Sbjct: 378 KVALLCGPPGLGKTTLAHIVAKHAGYNVVEMNASDDRSVEVFSNKIEAATQMRAVMGADP 199
Query: 570 APCVLFFDELDS 581
P L DE+D
Sbjct: 198 RPNCLIIDEIDG 163
>27434
Length = 472
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 241 ILLYGPPGTGKTLIARAVANETGAFFFLI 269
+ GPPG GKT I R++A G F I
Sbjct: 170 LCFVGPPGVGKTSIGRSIATTLGREFHRI 256
>01793
Length = 1739
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -3
Query: 175 IVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL 213
++ PD ++IH IKRE +N + YDD GG R +L
Sbjct: 1647 LILPDKHFSLIHSL*LQIKREKSHVCMNVICYDDSGGKRSEL 1522
>30736
Length = 520
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 236 KPPRGILLYGPPGTGKTLIARAVANETGA 264
+PP + + GPP +GKT + +AN+ GA
Sbjct: 129 RPPCKLAVLGPPLSGKTTLCHLLANKYGA 43
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|77404392|ref|NP_062750.2| staphylococcal nuclease
domain containing 1 [Mus musculus]
(910 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06128 439 e-124
02407 224 1e-58
24326 204 5e-58
04982 53 6e-07
21795 52 1e-06
34863 46 7e-05
03574 46 8e-05
17475 42 0.001
29083 35 0.091
36453 35 0.093
>06128
Length = 1202
Score = 439 bits (1129), Expect(2) = e-124, Method: Compositional matrix adjust.
Identities = 220/362 (60%), Positives = 272/362 (75%), Gaps = 2/362 (0%)
Frame = +3
Query: 439 TCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKE 498
TC +V+IGGINIAEALVSKGLA V+RYRQDDDQRSSHYDELLAAEARA K G GL SKKE
Sbjct: 60 TCCSVSIGGINIAEALVSKGLARVVRYRQDDDQRSSHYDELLAAEARAEKKGVGLFSKKE 239
Query: 499 VPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGI 558
P+HRVADI+GD KAKQFLPFLQRAGRS+AVVE+V SGSRL+L+LP+ETCLITFL++GI
Sbjct: 240 SPLHRVADIAGDVPKAKQFLPFLQRAGRSDAVVEFVASGSRLRLFLPRETCLITFLISGI 419
Query: 559 ECPRGARNLP-GLVQEGEPFSEEATLFTKELVLQRXXXXXXXSMDKAGNFIGWLHMDGAN 617
+CP+G R LP G E +P+ EEA LFTKE+ +QR ++DK GNFIGWL++D N
Sbjct: 420 DCPKGKRQLPSGQSFEADPYGEEALLFTKEICMQREVEVEVEAIDKGGNFIGWLYVDNTN 599
Query: 618 LSVLLVEQALSKVHFTAERSAYYKPLLSAEEAAKQRKEKVWAHYEERPVEEVMPVLEEKE 677
LSV LVE L+KVHFTAERS++YK LLSA+E AK K K W+++EE +EV E E
Sbjct: 600 LSVALVEAGLAKVHFTAERSSHYKTLLSAQERAKSAKLKTWSNFEE--PKEVEVAEEPVE 773
Query: 678 RSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDISSHPPVEGSYAPRRGEFCI 737
R +Y V +TE+TDD FY Q V+ G Q+E+LME MR ++ S+PP+ G+Y P+RG+ C
Sbjct: 774 RKINYTKVIITEVTDDFTFYAQKVDNGPQVERLMEQMRQEMDSNPPLPGAYTPKRGDLCA 953
Query: 738 AKF-VDGEWYRARVEKVESPAKVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATEY 796
AKF D +WYRA+V+KV S K + +ID+GN+E + S L LP AF + P QA EY
Sbjct: 954 AKFSADDQWYRAKVQKVHS-GKADILFIDFGNKESVASGSLAALPAAFLS--TPPQANEY 1124
Query: 797 AF 798
Sbjct: 1125VL 1130
Score = 24.3 bits (51), Expect(2) = e-124, Method: Compositional matrix adjust.
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 413 KKVNVTVDYIRPAS 426
KKVNV VDYI+P +
Sbjct: 1 KKVNVEVDYIQPPN 42
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 115/224 (51%), Gaps = 11/224 (4%)
Frame = +3
Query: 120 GENIAESLVAEGLATRREGMRANNPEQNRLSECEE----QAKASKKG--MWSEGNGS-HT 172
G NIAE+LV++GLA +R + R S +E +A+A KKG ++S+ H
Sbjct: 84 GINIAEALVSKGLA---RVVRYRQDDDQRSSHYDELLAAEARAEKKGVGLFSKKESPLHR 254
Query: 173 IRDLKYTIENPRHFVDSHHQKP-VNAIIEHVRDGSVVRALLLPGHHLVTVMLSGIKCPTF 231
+ D+ + + F+ + +A++E V GS +R L L+T ++SGI CP
Sbjct: 255 VADIAGDVPKAKQFLPFLQRAGRSDAVVEFVASGSRLRLFLPRETCLITFLISGIDCPKG 434
Query: 232 RRETDGSETPE--PFAAEAKFFTESRLLQRDVQIILESC-HNQNLLGTILHPNGNITELL 288
+R+ ++ E P+ EA FT+ +QR+V++ +E+ N +G + N N++ L
Sbjct: 435 KRQLPSGQSFEADPYGEEALLFTKEICMQREVEVEVEAIDKGGNFIGWLYVDNTNLSVAL 614
Query: 289 LKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPP 332
++ G A+ V ++ + L A ER AK +L+ W ++ P
Sbjct: 615 VEAGLAK-VHFTAERSSHYKTLLSAQER-AKSAKLKTWSNFEEP 740
>02407
Length = 2662
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/234 (47%), Positives = 153/234 (65%), Gaps = 4/234 (1%)
Frame = -2
Query: 681 SYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDISSHPPVEGSYAPRRGEFCIAKF 740
+Y V +TE+TDD FY Q V+ G Q+E+LME MR ++ S+PP+ G+Y P+RG+ C AKF
Sbjct: 2661 NYTKVIITEVTDDFTFYAQKVDNGPQVERLMEQMRQEMDSNPPLPGAYTPKRGDLCAAKF 2482
Query: 741 -VDGEWYRARVEKVESPAKVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATEYAFA 799
D +WYRA+V+KV S K + +ID+GN+E + S L LP AF + P QA EY+ A
Sbjct: 2481 SADDQWYRAKVQKVHS-GKADILFIDFGNKESVASGSLAALPAAFLS--TPPQANEYSLA 2311
Query: 800 FIQVPQD--EDARTDAVDSVVRDIQNTQCLLNVEHLSASCPHVTLQF-ADSKGDVGLGLV 856
+ +P D ED + DAVD++ RDI N Q +NVE+ S +VT+ D GDVGL L+
Sbjct: 2310 GVALPPDVVEDGKQDAVDALYRDIMNHQVQVNVEYRSGGVDYVTMMTEEDGTGDVGLALI 2131
Query: 857 KEGLVMVEVRKEKQFQKVITEYLNAQESAKSARLNLWRYGDFRADDADEFGYSR 910
+G V+VE RKE++ K++ +Y NA + A R N+W YGDFR DD EFG SR
Sbjct: 2130 NDGYVLVEERKERRLAKLMADYKNALDEALKKRKNIWHYGDFREDDTREFGISR 1969
>24326
Length = 1186
Score = 204 bits (520), Expect(2) = 5e-58, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 145/230 (63%), Gaps = 15/230 (6%)
Frame = -2
Query: 72 DTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEG 131
+T DEP+A+ AREFLRK K I T + G+ GE++A S A+
Sbjct: 645 ETKDEPFAWEAREFLRKS*XAK-----ISPSTWNTKSLGL--------GESMALSTWAKT 505
Query: 132 LATRR---------------EGMRANNPEQNRLSECEEQAKASKKGMWSEGNGSHTIRDL 176
+ R G++ ++ +Q RL + EE A+A+KKG ++ + S +RD+
Sbjct: 504 MKGRT*QSR*LQKVW*MYVAWGLKKDDADQQRLLQLEETARAAKKGKHAD-DASTRVRDI 328
Query: 177 KYTIENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLPGHHLVTVMLSGIKCPTFRRETD 236
+ IENPRHF+DSHH KPV A+IEHVRDG VRA LLP VTVMLSGIKCP F+ E
Sbjct: 327 TWIIENPRHFIDSHHSKPVEAVIEHVRDGCTVRAFLLPSFDYVTVMLSGIKCPMFKTE-G 151
Query: 237 GSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNLLGTILHPNGNITE 286
G + PE FA E ++FTESRLLQR+V+IILE NQNLLGT+LHPNGNITE
Sbjct: 150 GKQIPEQFAEECRYFTESRLLQREVKIILEGVSNQNLLGTVLHPNGNITE 1
Score = 39.3 bits (90), Expect(2) = 5e-58, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = -3
Query: 18 TVQRGIVKMVLSGCAIIVXXXXXXXXXXXXXINLSNIRAGNLARRAAA 65
TV RGIVK VLSG I++ + LSNI+A LARRA +
Sbjct: 809 TVHRGIVKQVLSGDTIVIRGQPKGGPPPEKTLCLSNIQAPKLARRAKS 666
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Frame = -2
Query: 544 LPKETCLITFLLAGIECPRGARNLP-GLVQEGEPFSEEATLFTKELVLQRXXXXXXXSMD 602
LP+ETCLITFL++GI+CP+G R LP G E +P+ EEA LFTKE+ +QR ++D
Sbjct: 1185 LPRETCLITFLISGIDCPKGKRQLPSGQSFEADPYGEEALLFTKEICMQREVEVEVEAID 1006
Query: 603 KAGNFIGWLHMDGANLSVLLVEQALSKVHFTAERSAYYKPLLSAEEAAK 651
K GNFIGWL++D NLSV LVE L+KVHFTAERS++YK LLSA+E AK
Sbjct: 1005 KGGNFIGWLYVDNTNLSVALVEAGLAKVHFTAERSSHYKTLLSAQERAK 859
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 169/396 (42%), Gaps = 21/396 (5%)
Frame = -2
Query: 218 LVTVMLSGIKCPTFRRETDGSETPE--PFAAEAKFFTESRLLQRDVQIILESC-HNQNLL 274
L+T ++SGI CP +R+ ++ E P+ EA FT+ +QR+V++ +E+ N +
Sbjct: 1167 LITFLISGIDCPKGKRQLPSGQSFEADPYGEEALLFTKEICMQREVEVEVEAIDKGGNFI 988
Query: 275 GTILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPP-T 333
G + N N++ L++ G A+ V ++ + L A ER AK P
Sbjct: 987 GWLYVDNTNLSVALVEAGLAK-VHFTAERSSHYKTLLSAQER-AKSTSFSYNHHGKPKHA 814
Query: 334 ANLDQKDKQF-----------VAKVMQVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGDN 382
AN ++++ AK D + VK + +SS P +++ N
Sbjct: 813 ANCPPRNRETGLVR*HDRHSRSAKRGTTTREDTMFVK-----HPGTQVSS--PGQIQ--N 661
Query: 383 IQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCAT 442
I++ + D P+ +EAREFLRK K I P++ T+++ +T
Sbjct: 660 IENSVET----KDEPFAWEAREFLRKS*XAK--------ISPSTWNTKSLGLGESMALST 517
Query: 443 V--TIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP 500
T+ G + K + + D L ARA K GK
Sbjct: 516 WAKTMKGRT*QSR*LQKVW*MYVAWGLKKDDADQQRLLQLEETARAAKKGKHADDAST-- 343
Query: 501 IHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIEC 560
RV DI+ + + F+ + EAV+E+V G ++ +L +T +L+GI+C
Sbjct: 342 --RVRDITWIIENPRHFIDS-HHSKPVEAVIEHVRDGCTVRAFLLPSFDYVTVMLSGIKC 172
Query: 561 P----RGARNLPGLVQEGEPFSEEATLFTKELVLQR 592
P G + +P E F+EE FT+ +LQR
Sbjct: 171 PMFKTEGGKQIP------EQFAEECRYFTESRLLQR 82
>04982
Length = 1215
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Frame = +1
Query: 673 LEEKERSASYKPVFVTEITDDLHFYVQDVE-TGTQLEKLMENMRNDISSHPPVEGSY--- 728
+ E E + VFV+ + HF++Q V T L+K+ ++M + S+P +Y
Sbjct: 217 IPEAEPVKEFMEVFVSAVEHAGHFWLQMVNTTALNLDKMTDDM-SLFYSNPDTAQTYRLT 393
Query: 729 APRRGEFCIAKFV-DGEWYRARVEKVESPAKVHVFYIDYGNREILPSTRLGTLPPAFSTR 787
+ G+ A F D WYRARV E KV ++Y D+G+ ++P L L + +
Sbjct: 394 EVKEGDVVAAAFAEDNMWYRARVVGFED-GKVDLYYFDFGDNGLVPEEALRELKAEYLS- 567
Query: 788 VLPAQATEYAFAFIQ 802
LP QA E A ++
Sbjct: 568 -LPVQAIECKLANVK 609
>21795
Length = 605
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 20/138 (14%)
Frame = +3
Query: 687 VTEITDDLHFYVQ--DVETGTQLEKL--MENMRNDISSHPPVEGSYAPRRGEFCIAKFVD 742
VTE+ HFY Q D E T L+ L M N N +S + P + C A ++D
Sbjct: 126 VTEVVQCGHFYAQCMDHENITHLQTLLSMLNPCNKLSXL-----NTPPHKDMMCXAPYMD 290
Query: 743 G--EWYRARVEKVES--------PAKV---HVFYIDYGNREILPSTRLGTLPP---AFST 786
+YRAR+E +++ P VF++DYGNR+ +P RL LP + S
Sbjct: 291 EYEAYYRARIESLQTRTLLLRGIPTTTRVAQVFFVDYGNRDEIPLDRLRALPSEAFSISM 470
Query: 787 RVLPAQATEYAFAFIQVP 804
+ + + TE + ++ P
Sbjct: 471 QAIECELTEIRPSSVKCP 524
>34863
Length = 634
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = -3
Query: 733 GEFCIAKFV-DGEWYRARVEKV-ESPAKVHVFYIDYGNREILPSTRLGTLPPAFSTRVLP 790
G+ + +F D WYR RVE+V E +F+ DYGN+E + L +P F R LP
Sbjct: 269 GDVVLVEFSEDNLWYRGRVERVYEDGTTCSIFFTDYGNKEDKEISSLMVVPQQF--RALP 96
Query: 791 AQATEYAFAFI--QVPQD 806
AQA A + VP++
Sbjct: 95 AQAIACQLAGLPESVPEE 42
>03574
Length = 3150
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = -3
Query: 714 MRNDISSHPPVEGSYA--PRRGEFCIAKFV-DGEWYRARVEK-VESPAKVHVFYIDYGNR 769
M +D+++ P + + P GE C A+F D YRA V K V+Y+DYGN
Sbjct: 847 MMDDLNASPGQDSALQELPAAGEMCAARFSQDDRLYRALVAKNYPHDQTTLVYYVDYGNS 668
Query: 770 EILPSTRLGTLPPAFSTRVLPAQATEYAFAFIQVPQ 805
E++ RL LP F PAQA AF + +P+
Sbjct: 667 EVVTLDRLLALPQKFQDT--PAQALR-AFINLDLPE 569
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = -3
Query: 663 ERPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDISSHP 722
E+P +V+P + S P+ I +D Y D E + L++ + +
Sbjct: 1651 EQPDCDVLPHPHPPSNTLSVLPM---HIDNDGIIYAHDCEEEXKSTALLDLIDEYAKTEA 1481
Query: 723 PVEGSYAPRRGEFCIAKF-VDGEWYRARVEKVESPAKVHVFYIDYGN 768
P +G + G+ C+A F +D WYRARV +V V V Y+D+GN
Sbjct: 1480 P-KGQLKVKVGQICLAHFSIDNAWYRARVLEVTQ-KDVKVKYVDFGN 1346
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 742 DGEWYRARVEKVESPAKVHVFYIDYGNREILPSTRLGTL 780
D WYRA + V A V +D+G+ + +PS+RL L
Sbjct: 2369 DDRWYRATITAVLHDAVYQVSLVDFGHADTVPSSRLRXL 2253
>17475
Length = 884
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 1/172 (0%)
Frame = -3
Query: 737 IAKFVDGEWYRARVEKVESPAKVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATEY 796
++ GEW+R+ V ++ S ++VHV + DYGN +L + L LP P +
Sbjct: 579 LSGLFQGEWFRSEVTEIVS-SQVHVTFFDYGNEAVLDLSDLCPLPKEL-CHSFPLATVKC 406
Query: 797 AFAFIQVPQDEDARTDAVDSVVRD-IQNTQCLLNVEHLSASCPHVTLQFADSKGDVGLGL 855
I P D + SV R ++N + V+ + V + +S DV L
Sbjct: 405 CIDGIG-PAGGDTWDEECISVTRSLLENQPVAVTVKSVKEDMRSVMVINQNSNQDVAQLL 229
Query: 856 VKEGLVMVEVRKEKQFQKVITEYLNAQESAKSARLNLWRYGDFRADDADEFG 907
V+EG + ++ QK + AK A L DFR A G
Sbjct: 228 VQEGKAVSLPAEQTDAQKEELMRQMQELQAKMAALGTK*SKDFRNSSALRLG 73
>29083
Length = 710
Score = 35.4 bits (80), Expect = 0.091, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = -1
Query: 685 VFVTEITDDLHFYVQDVETGTQ--LEKLMENMRNDISSHPPVEGSYAPRRGEFCIAKFV- 741
+ VT I + QD+ +Q +E + + + P ++G P G+ A+F
Sbjct: 296 MMVTFIETPTLLWCQDLTLTSQNEVELIATKLAEICPTAPKLQGR--PEPGKMYGAQFSE 123
Query: 742 DGEWYRA--RVEKVESPAKVHVFYIDYGNRE 770
DGEWYR R+ + KV + YID+GN E
Sbjct: 122 DGEWYRCQLRMNIANNQDKVKIQYIDFGNCE 30
>36453
Length = 667
Score = 35.4 bits (80), Expect = 0.093, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +2
Query: 707 LEKLMENMRNDISSHPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPA--KVHVFYI 764
LE+L ++ N S+P V P G A +G+WYRA+V +V +PA + + Y+
Sbjct: 32 LERL-NHIMNLCYSNPSVPTLPLPVEGGVICAAESEGQWYRAQVMQV-NPADDQCEIRYL 205
Query: 765 DYGN-REILPS 774
DYG R+ +PS
Sbjct: 206 DYGGVRDCVPS 238
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|83816893|ref|NP_031866.2| DEAD (Asp-Glu-Ala-Asp) box
polypeptide 5 [Mus musculus]
(615 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04883 441 e-124
09327 372 e-103
00621 278 6e-75
01517 218 4e-57
30136 202 4e-52
01062 189 2e-48
09316 166 4e-41
19172 160 2e-39
02054 99 2e-34
00162 113 2e-30
07310 126 2e-29
00739 126 3e-29
12121 121 1e-27
02498 71 2e-26
33025 108 4e-25
14337 104 1e-22
22006 97 2e-20
08036 65 3e-20
34134 94 2e-19
19640 92 9e-19
12995 89 5e-18
34295 84 1e-16
17544 79 4e-15
00617 78 1e-14
17708 77 2e-14
19525 74 1e-13
11624 74 2e-13
39583 69 6e-12
11160 65 7e-11
10649 64 1e-10
03381 55 1e-07
19151 54 2e-07
31220 52 5e-07
33083 50 3e-06
11423 46 4e-05
06438 44 2e-04
31899 41 0.001
01821 38 0.014
22529 29 6.2
>04883
Length = 1155
Score = 441 bits (1133), Expect(2) = e-124, Method: Compositional matrix adjust.
Identities = 199/311 (63%), Positives = 246/311 (79%)
Frame = +3
Query: 37 PGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNF 96
PG L K KW++ +L F+KNFY+E P A R E+D YR+S +I+V G P P+L F
Sbjct: 189 PGGNLRKPKWDMSKLTPFQKNFYKESPTTASRNPMELDEYRQSHQISVSGKFVPNPILTF 368
Query: 97 YEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHI 156
E NFP VM+ + R ++T PT IQ+Q WPVA++G D+VG+AQTGSGKTL+++LPAIVHI
Sbjct: 369 TEVNFPDYVMNQVRRNSWTAPTPIQSQSWPVAMAGKDLVGIAQTGSGKTLAFMLPAIVHI 548
Query: 157 NHQPFLERGDGPICLVLAPTRELXXXXXXXXXEYCRACRLKSTCIYGGAPKGPQIRDLER 216
NHQ +LERGDGPI L L PTREL E+ A R++S C+YGGAP+GPQ+RDLER
Sbjct: 549 NHQAYLERGDGPIVLALVPTRELAQQVQEVAQEFGHASRVRSVCVYGGAPRGPQLRDLER 728
Query: 217 GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL 276
G EICIATPGRLIDFLE +TNLRR TYLVLDEADRMLDMGFEPQIRKI++QIRPDRQTL
Sbjct: 729 GAEICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 908
Query: 277 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEI 336
MWSATWPKEVR+LAEDF+ +Y+ +NIGALEL+ANHNILQI+DVC + EK++KL++L+ EI
Sbjct: 909 MWSATWPKEVRKLAEDFIDEYVQVNIGALELTANHNILQIIDVCMEHEKEDKLVKLLNEI 1088
Query: 337 MSEKENKTIVF 347
M+ K+ F
Sbjct: 1089MTRKKRTKPSF 1121
Score = 23.9 bits (50), Expect(2) = e-124, Method: Compositional matrix adjust.
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +1
Query: 347 FVETKRRCDEL 357
FVETKR+CD++
Sbjct: 1120 FVETKRKCDDI 1152
>09327
Length = 1087
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 167/234 (71%), Positives = 204/234 (87%)
Frame = +2
Query: 172 VLAPTRELXXXXXXXXXEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 231
+L PTREL E+ + R++S C+YGGA +GPQ+R+L+RG EICIATPGRLIDF
Sbjct: 20 LLVPTRELAQQVQEVAVEFGHSSRVRSVCVYGGAQRGPQLRELDRGAEICIATPGRLIDF 199
Query: 232 LECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAE 291
LE +TNLRR TYLVLDEADRMLDMGFEPQIRKIV+QIRPDRQTLMWSATWPKEVR+LAE
Sbjct: 200 LESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRKLAE 379
Query: 292 DFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETK 351
DF+ +Y INIGAL+L+ANHNILQI+DVC D EK+EKL++L+ EIM EKEN+T++FVETK
Sbjct: 380 DFIMEYTQINIGALQLTANHNILQIIDVCMDHEKEEKLVKLLNEIMQEKENRTLIFVETK 559
Query: 352 RRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
R+CD++ R+M+RDGWP + IHGDKSQQERDWVLN+F++G+ P+L+ATDVASRGL
Sbjct: 560 RKCDDIHRRMKRDGWPVLCIHGDKSQQERDWVLNDFRNGRCPVLLATDVASRGL 721
>00621
Length = 2263
Score = 278 bits (710), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 251/460 (54%), Gaps = 31/460 (6%)
Frame = +1
Query: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVD--TYRRSKEITVRGHNC 89
K+ N +K K+KW+ + D A+ E D +R I+ +G
Sbjct: 94 KRLKNMAKKEAKQKWD-----------DRHWTDKAKEEMAERDWRIFREDYNISCKGGRI 240
Query: 90 PKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYL 149
P P+ + E++ A++M+VI R + EPT IQ Q P+ L D++GVA+TGSGKT ++L
Sbjct: 241 PNPIRFWKESDLGADIMEVIDRVGYKEPTPIQMQAIPIGLQNRDIIGVAETGSGKTAAFL 420
Query: 150 LPAIVHINHQPFLERGD----GPICLVLAPTRELXXXXXXXXXEYCRACRLKSTCIYGGA 205
+P +V I P +ER + GP ++LAPTREL ++ ++ + GG
Sbjct: 421 IPLLVWIQSLPKIERLEDADQGPYAVILAPTRELAQQIEEETRKFGEGLGIRVVSVIGGI 600
Query: 206 PKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKI 265
+ Q L++G E+ IATPGR+ID LE L + TY+V+DEADRM++MGFEP++RKI
Sbjct: 601 SREEQGFKLQQGCEVVIATPGRMIDVLENRYLVLNQCTYVVMDEADRMINMGFEPEVRKI 780
Query: 266 VDQI-----RPD--------------------RQTLMWSATWPKEVRQLAEDFLKDYIHI 300
+D + +PD RQT+M++AT P +V +LA FL+ +
Sbjct: 781 LDYLPVSNQKPDNDDAEDDLKMLQNFKSKHKYRQTVMFTATMPPQVERLARTFLRRPTVV 960
Query: 301 NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK 360
IG + + QIV + + EK +KLI ++ + + I+FV K+ D L +
Sbjct: 961 YIGNVGKPVER-VEQIVYMLTESEKRKKLIEVLN---AGVDPPIIIFVNQKKGADVLAKS 1128
Query: 361 MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN 420
+ + G+ A +HG K Q++R++ L K G I++ATDVA RG+D++DV V+NYD
Sbjct: 1129LEKMGFNATTLHGGKGQEQREYALASLKGGAKDIMVATDVAGRGIDIKDVSLVLNYDMAR 1308
Query: 421 SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVL 460
+ EDY HRIGRT R+ K GT+ TF T + DL ++
Sbjct: 1309TIEDYTHRIGRTGRAGKEGTSITFLTKEDSMVFYDLKQLM 1428
>01517
Length = 2605
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 160/243 (65%), Gaps = 4/243 (1%)
Frame = +2
Query: 229 IDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIV--DQIRP--DRQTLMWSATWPK 284
+D +E GK + YLVLDEADRMLDMGFEPQIR+IV D + P RQTLM+SAT+PK
Sbjct: 2 VDMMERGKIGMDHCNYLVLDEADRMLDMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPK 181
Query: 285 EVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKT 344
E++ LA DFL +YI + +G + S + NI Q V + EK L+ L+ + E+ T
Sbjct: 182 EIQLLARDFLDNYIFLAVGRVG-STSENITQKVVWVEEPEKRSFLLDLLMASGTGPESLT 358
Query: 345 IVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRG 404
+VFVETK+ D L + + + +PA IHGD+SQ+ER+ L FK+G PIL+AT VA+RG
Sbjct: 359 LVFVETKKGADSLEQFLMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVAARG 538
Query: 405 LDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREAN 464
LD+ +V+ VIN+D P+ E+Y+HRIGRT R G A +FF N D++ +L EAN
Sbjct: 539 LDIPNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNIARDMLDLLTEAN 718
Query: 465 QAI 467
Q +
Sbjct: 719 QEV 727
>30136
Length = 524
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 123/174 (70%)
Frame = +2
Query: 51 LPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 110
L F++NFYQEHP +A RT EV YR EITVRG P+ +F EA P V+ I
Sbjct: 5 LTPFKRNFYQEHPTVANRTPYEVQRYRDEHEITVRGQAA-NPIQDFAEAYLPDYVIKEIR 181
Query: 111 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 170
RQ + PT IQAQGWP+A+SG + VG+A+TGSGKTL Y+LPAIVHIN+Q L+RG+GPI
Sbjct: 182 RQGYKSPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGEGPIA 361
Query: 171 LVLAPTRELXXXXXXXXXEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIAT 224
LVLAPTREL E+ + +++TC++GGAPKG Q+RDL+RG EI IAT
Sbjct: 362 LVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 523
>01062
Length = 2138
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 178/343 (51%)
Frame = -3
Query: 114 FTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVL 173
F +P+AIQ + + G D++ AQ+G+GKT ++ + + ++ Q + L+L
Sbjct: 2019 FEKPSAIQQRAVKPIVKGRDVIAQAQSGTGKTATFSISVLQCLDIQLRETQA-----LIL 1855
Query: 174 APTRELXXXXXXXXXEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 233
+PTREL ++ GG G IR L+ G I TPGR+ D ++
Sbjct: 1854 SPTRELATQIQKVMLALGDYMNVQCHSCIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIK 1675
Query: 234 CGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDF 293
R ++LDEAD ML+ GF+ QI + + P Q ++ SAT P E+ ++ F
Sbjct: 1674 RRNLRTRSIKMMILDEADEMLNKGFKEQIYDVYRYLPPATQVILISATLPHEILEMTNKF 1495
Query: 294 LKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRR 353
+ D I I + EL+ V V + K + L L + + + ++F TKR+
Sbjct: 1494 MTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI---TQAVIFCNTKRK 1324
Query: 354 CDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFV 413
D LT KMR + +HGD Q+ER+ ++ F+ G + +LI TDV +RG+DV+ V V
Sbjct: 1323 VDWLTEKMREANFTVSSMHGDMPQKEREAIMKVFRAGDSRVLITTDVWARGIDVQQVSLV 1144
Query: 414 INYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456
INYD PN+ E YIHRIGR+ R + G A F ++I+ + D+
Sbjct: 1143 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDI 1015
>09316
Length = 2312
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 172/340 (50%), Gaps = 4/340 (1%)
Frame = +2
Query: 114 FTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPI-CLV 172
F P+ +Q + P A+ +D++ A++G GKT ++L + LE DG + LV
Sbjct: 905 FEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQ------LEPVDGQVSVLV 1066
Query: 173 LAPTRELXXXXXXXXXEYCRACR-LKSTCIYGGAPKGPQIRDLERGV-EICIATPGRLID 230
+A TREL + + +K +GG L + I + TPGRL
Sbjct: 1067 MAHTRELAFQISKEYERFSKYMNNVKIAVFFGGMSVKKDEEVLSKNCPHIVVGTPGRLHA 1246
Query: 231 FLECGKTNLRRTTYLVLDEADRML-DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 289
+ NL++ + +LDE D+ML D+ +++I ++Q +M+SAT KE+R +
Sbjct: 1247 LAKANNLNLKKIKHFILDECDKMLADLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPI 1426
Query: 290 AEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVE 349
+ F++D + + + H + Q D EK+ KL L++ + + N+ I+FV+
Sbjct: 1427 CKKFMQDPMEVYVDDDSKLTLHGLQQHYCKLKDNEKNRKLFELLDVL---EFNQVIIFVK 1597
Query: 350 TKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVED 409
+ RC L++ + +PA+ IH +Q+ER +FK + IL+AT++ RG+D+E
Sbjct: 1598 SVPRCMALSQLLLEQNFPAIAIHRQMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIER 1777
Query: 410 VKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
V V NYD P S+ Y+HR+ R R G A TF + N
Sbjct: 1778 VNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 1897
>19172
Length = 484
Score = 160 bits (404), Expect = 2e-39, Method: Composition-based stats.
Identities = 73/114 (64%), Positives = 92/114 (80%)
Frame = -1
Query: 292 DFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETK 351
+FL +YI +NIG+L LSANHNILQIVDVC + EK KLI+L+ +I E E KTI+FVETK
Sbjct: 484 EFLNNYIQVNIGSLSLSANHNILQIVDVCDESEKIAKLIQLLTQISGENETKTIIFVETK 305
Query: 352 RRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
+R DE+TR + R GW A IHGDKSQQERD+VL+ F++G+ IL+ATDVA+RGL
Sbjct: 304 KRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGL 143
>02054
Length = 1110
Score = 99.4 bits (246), Expect(2) = 2e-34, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%)
Frame = -3
Query: 325 KDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVL 384
KD L+ ++ E+ N +VF T + +R G+ A+ +HG SQ +R L
Sbjct: 679 KDAYLVSILNELAG---NSFMVFCSTCANTQRVALLLRNLGFTAIPLHGQMSQAKRLGSL 509
Query: 385 NEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444
N+FK ILIATDVASRGLD+ V V+N D P S+DY+HR+GRTAR+ ++G A TF
Sbjct: 508 NKFKSKDRSILIATDVASRGLDIPHVDVVLNLDIPTHSKDYMHRVGRTARAGRSGRAITF 329
Query: 445 FTPNNIK 451
+ +++
Sbjct: 328 VSQYDVE 308
Score = 65.5 bits (158), Expect(2) = 2e-34, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = -2
Query: 220 ICIATPGRLIDFLECGK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW 278
I IATPGRL+D LE K +LR +LV+DEADR+LDM F+ ++ KI+ I +R T ++
Sbjct: 995 IIIATPGRLVDHLENTKGFSLRALKFLVMDEADRILDMNFQDEVDKILKVIPRERNTYLF 816
Query: 279 SATWPKEV 286
SAT +V
Sbjct: 815 SATMTNKV 792
>00162
Length = 2322
Score = 113 bits (282), Expect(2) = 2e-30, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 133/283 (46%), Gaps = 5/283 (1%)
Frame = +3
Query: 171 LVLAPTRELXXXXXXXXXEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 230
L++ PTREL + + + GG + L I I T GRL+
Sbjct: 147 LIITPTRELAFQIYEVLNKIRTFHDFSANLVIGGKFMWRET-HLMGKTNIVICTVGRLLH 323
Query: 231 FLECGKT-NLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 289
LE + ++ LVLDEADR++D F + I+ + P RQTL++SAT V+ L
Sbjct: 324 HLESTQAFDVSELKVLVLDEADRIMDSKFAQDMDSIMSHL-PPRQTLLFSATQTMSVKTL 500
Query: 290 AEDFLKD--YIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVF 347
A LKD Y+ ++ A E + Q VC E EKL L + + NK +VF
Sbjct: 501 ARLSLKDPSYVSVDRHA-EYVTPTGLEQSYIVC---ELHEKLSLLYSFLKNHPNNKIMVF 668
Query: 348 VETKRRCDELTRKMRRD--GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
++T ++ + ++R+ G + +HG Q R + EF + ILI TD+A RGL
Sbjct: 669 LQTCKQARYVHTVIKRERPGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGL 848
Query: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPN 448
D V +VI D P YIHR GRTAR G A P+
Sbjct: 849 DFPAVNWVIQLDCPVDVNTYIHRAGRTARFECNGQALLVLLPS 977
Score = 38.1 bits (87), Expect(2) = 2e-30, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +2
Query: 127 VALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
+A GLD++G A+TGSGKTL++L+P + ++ Q +
Sbjct: 20 LACRGLDVLGAAKTGSGKTLAFLIPILETLSKQDIIS 130
>07310
Length = 712
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Frame = +2
Query: 245 LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGA 304
LVLDEAD++L F+ + I+ + P RQ L++SAT+P V Q + +LK+ IN+
Sbjct: 56 LVLDEADKLLSQDFKGMLDNIIAHLPPQRQILLYSATFPLSVEQFMKKYLKNPYEINLME 235
Query: 305 LELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKE-NKTIVFVETKRRCDELTRKMRR 363
EL+ L+ V + ++++ + + + S+ + N++I+F + +R + L +K+
Sbjct: 236 -ELT-----LKGVTQYYAFVQEKQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITE 397
Query: 364 DGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSE 423
G+ IH +QQ R+ V ++F+ G L+ +D+ +RG+D++ V VIN+D+P +E
Sbjct: 398 LGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQAVNVVINFDFPKHAE 577
Query: 424 DYIHRIGRTARSTKTGTAYTFFT 446
Y+HRIGR+ R G A T
Sbjct: 578 TYLHRIGRSGRYGHLGVAINLIT 646
>00739
Length = 1313
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 135/252 (53%), Gaps = 3/252 (1%)
Frame = +3
Query: 210 QIRDLERGVEICIATPGRLIDFLE-CGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ 268
Q +DL I I+TPGRL D ++ C +L+R +LV+DEADR+LD F Q+ I+ +
Sbjct: 18 QGQDLAVKPHIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDDNFGAQLEPILTR 197
Query: 269 IRPDRQTLMWSATWPKEVRQLAEDFL-KDYIHINIGALELSANHNILQIVDVCHDVEKDE 327
+ RQTL++SAT V L + L K ++ I E + + + + KD
Sbjct: 198 LPSARQTLLFSATLSPTVNALRDSVLNKPFVWIQQS--ERATVDELQEDYVLVPASMKDA 371
Query: 328 KLIRLMEEIMSEK-ENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE 386
++ +++ + + + I+F T + L + + + +H Q+ R L+
Sbjct: 372 YMVHILDHWLKDHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFRLSSLSR 551
Query: 387 FKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFT 446
FK + ILI+TDVASRGLD+ V +IN++ PN DY+HR+GRTAR+ + G + + T
Sbjct: 552 FKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDYVHRVGRTARAGRCGQSISLVT 731
Query: 447 PNNIKQVSDLIS 458
+IK + + S
Sbjct: 732 EFDIKLIKSIES 767
>12121
Length = 465
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 73/107 (68%)
Frame = -2
Query: 37 PGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNF 96
PG L K KW+L +L +FEK+FY+E P +A R ++ +R + +IT+ G P P+L F
Sbjct: 323 PGANLRKPKWDLSKLVRFEKHFYKEAPSVANRNPIQIQEFRNNNQITLSGRYLPNPILTF 144
Query: 97 YEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSG 143
EAN P VM I R N+T PT IQ+Q WP+A+SG D+VG+AQTGSG
Sbjct: 143 EEANLPDYVMSQIHRNNWTSPTPIQSQSWPIAMSGKDLVGIAQTGSG 3
Score = 82.0 bits (201), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/87 (51%), Positives = 50/87 (57%), Gaps = 13/87 (14%)
Frame = -3
Query: 220 ICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ---IRPDRQTL 276
ICIATPGRLIDFLE +TNLRR TYLVLDEADRMLDMGF P R + P +
Sbjct: 463 ICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFXPP*RACSLEPTCASPSGTSP 284
Query: 277 MWSA----------TWPKEVRQLAEDF 293
WSA WP E + + F
Sbjct: 283 NWSALRNTSTKRLLVWPIETQYRYKSF 203
>02498
Length = 1955
Score = 70.9 bits (172), Expect(2) = 2e-26, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Frame = +3
Query: 325 KDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVL 384
++EK + L S ++++F + L +M D + G+ + ++R ++
Sbjct: 810 QEEKYVALCNIYGSISVGQSMIFCHKRSTAAWLAERMTADHHAVGLLTGELTIEQRAAII 989
Query: 385 NEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNS------SEDYIHRIGRTARSTKT 438
F+ GK +LI T+V++RG+DVE V V+N+D P + E Y+HRIGRT R K
Sbjct: 990 KRFREGKEKVLITTNVSARGIDVEMVTVVVNFDLPVTQDWRPDCETYLHRIGRTGRFGKN 1169
Query: 439 GTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQL 474
G A N+ S ++++R + K+ +L
Sbjct: 1170GIAI------NMVDNSRSMAIMRSIEKHFGRKIEKL 1259
Score = 67.4 bits (163), Expect(2) = 2e-26, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Frame = +1
Query: 81 EITVRGHNCPKPVLNFYEA-NFPANVMDVIARQNFTEPTAIQAQGWPVALSG--LDMVGV 137
E+ + N P + +EA N ++ + F P+ IQ P+ L+ ++M+
Sbjct: 91 EVLRKDPNSPLYSVKSFEALNLKPQLLKGVYDMGFNAPSKIQETALPILLADPPVNMIAQ 270
Query: 138 AQTGSGKTLSYLLPAIVHIN-HQPFLERGDGPICLVLAPTRELXXXXXXXXXEYCRACRL 196
+Q+G+GKT +++L + ++ Q F P CL LAPT EL + +
Sbjct: 271 SQSGTGKTAAFVLTMLSRVDISQTF------PQCLCLAPTYELALQIGEVIEKMSKHM-- 426
Query: 197 KSTCIYGGAPKGPQIRDLERG----------VEICIATPGRLIDFLECGKT-NLRRTTYL 245
G +IR RG +I I TPG ++D+ K L +
Sbjct: 427 ----------TGLEIRYAVRGERVNRGEVLSEQIVIGTPGTVMDWSHRFKALPLEKLRVF 576
Query: 246 VLDEADRMLDM-GFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFL 294
VLDEAD M+ M G + Q +I ++ Q L++SAT+ + V Q A+ +
Sbjct: 577 VLDEADVMISMQGHQDQSTRIQKRLSSGCQMLLFSATYDQVVMQFAQRII 726
>33025
Length = 558
Score = 108 bits (270), Expect(2) = 4e-25, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 4/156 (2%)
Frame = +3
Query: 189 EYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248
++ R + + +YG + Q + +G + + TPGRL+DF+ +L + YL+LD
Sbjct: 21 KFSRGTDVHPSVVYGATDRRYQKSRIMKGANLVVGTPGRLLDFIGDQTISLGKCQYLILD 200
Query: 249 EADRMLDMGFEPQIRKIVDQI----RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGA 304
EADRMLDMGFEP+IRK+VD + RQTLM+SAT+ +++++LA DFL DY+ I +G
Sbjct: 201 EADRMLDMGFEPEIRKLVDTHGMPPKTQRQTLMFSATFKEDIQRLAGDFLNDYLFITVGI 380
Query: 305 LELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK 340
+ A ++ Q ++K + L ++ E+ + K
Sbjct: 381 VG-GACSDVTQTFLEVDRLQKRDHLCEILNEMGTAK 485
Score = 25.0 bits (53), Expect(2) = 4e-25, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 337 MSEKENKTIVFVETKRRCDELTRKMRRDGWP 367
M + K +VFV KR D L + + G+P
Sbjct: 466 MRWAQQKVLVFVGQKRNADFLASYLSQSGYP 558
>14337
Length = 693
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 77/131 (58%)
Frame = +2
Query: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 403
+VFV++K+R EL + D IH DK Q ERD + F G+ +L+ T++ R
Sbjct: 65 VLVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDATVRAFTEGRVWVLVCTELMGR 244
Query: 404 GLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREA 463
G+D + + VINYD+P ++ YIHRIGRT R+ G A TFFT ++ + + ++++EA
Sbjct: 245 GIDFKGINLVINYDFPTNAVSYIHRIGRTGRAGVPGRAITFFTEQDVTHLRSIANIIKEA 424
Query: 464 NQAINPKLLQL 474
+ +L+L
Sbjct: 425 GCEVPEYMLRL 457
>22006
Length = 3414
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 76/140 (54%)
Frame = +2
Query: 117 PTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPT 176
PT IQ + PV + G DMV +A+TGSGKT ++L+P + + + G L+L+PT
Sbjct: 3005 PTPIQRKTIPVIMEGKDMVAMARTGSGKTAAFLVPMLERLK----MHSSKGARALILSPT 3172
Query: 177 RELXXXXXXXXXEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK 236
REL E + L++ I GG Q L + +I IATPGRL+ L K
Sbjct: 3173 RELALQTLKFTKELGKFLDLRAAVILGGDRMEDQFSALHQNPDIIIATPGRLLHVLVEMK 3352
Query: 237 TNLRRTTYLVLDEADRMLDM 256
+L+ Y+V DEADR+ +M
Sbjct: 3353 KSLKEVIYVVFDEADRLFEM 3412
>08036
Length = 1226
Score = 65.5 bits (158), Expect(2) = 3e-20, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Frame = +1
Query: 222 IATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSAT 281
+ TP R++ L G L LV+DEAD + G E ++K+++++ Q + SAT
Sbjct: 4 VGTPSRILAHLRAGHLELHTVQMLVVDEADLVFSFGHEADMKKLMEELPRIYQAFLMSAT 183
Query: 282 WPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEI-MSEK 340
++V+ L + L + + + + +L + + Q C E D+K ++ + +
Sbjct: 184 LSEDVKALKKMVLHNPVILKLKESQLPESTQLTQYHVKC---EVDDKFTLMVAVLKLGLV 354
Query: 341 ENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
K+I+FV + C +L + G PA ++ + + R ++++F G I+IA+D
Sbjct: 355 RGKSILFVNSVDSCYKLKLFLEPFGIPACVLNSELPVKSRCHIVSQFNEGLYDIIIASD 531
Score = 51.6 bits (122), Expect(2) = 3e-20, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +3
Query: 402 SRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFT 446
+RG+D ++V VIN+++P + + YIHR+GRTAR K G A + +
Sbjct: 612 ARGIDFQNVSNVINFEFPKTVDAYIHRVGRTARGDKQGCALSLIS 746
>34134
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = +3
Query: 126 PVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPT 176
P+A+SG D VG+AQTGSGKTLS++LPAIVHINHQP LERGDGPI LVL PT
Sbjct: 87 PIAMSGRDCVGIAQTGSGKTLSFILPAIVHINHQPTLERGDGPIALVLVPT 239
>19640
Length = 456
Score = 91.7 bits (226), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 61/86 (70%)
Frame = -1
Query: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
+F T+R+ D+LT++M + +HGD Q++R+ ++ +F+ G + +LI TD+ +RG+
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 406 DVEDVKFVINYDYPNSSEDYIHRIGR 431
DV+ V VINYD P++ E+YIHRIGR
Sbjct: 276 DVQQVSLVINYDLPSNRENYIHRIGR 199
>12995
Length = 1072
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%)
Frame = +3
Query: 320 CHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 379
C +K+ L+ L+ +++SE + T+VFV TK + L + + G I+ Q
Sbjct: 69 CRADDKEAMLLYLLRDVISEND-LTVVFVATKHHVEYLNTLLTKCGIACTYIYSSLDQTA 245
Query: 380 RDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTG 439
R + +F H + +++ TD+A+RG+D+ + V+N+ +P ++ ++HR+GR AR+ ++G
Sbjct: 246 RKIHVAKFTHKQVKVMLVTDLAARGIDIPQLDNVVNFHFPAKAKLFVHRVGRVARAGRSG 425
Query: 440 TAYTFFTPNNIKQVSDL 456
TAY+ + + + DL
Sbjct: 426 TAYSLVAMDEVAHLVDL 476
>34295
Length = 694
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%)
Frame = -1
Query: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 403
++F TK+ C L+ + + +HG Q+ER L+ FK LIATDVA+R
Sbjct: 535 VMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLIATDVAAR 356
Query: 404 GLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFF 445
GLD+ V+ VIN+ P + ++YIHR+GRTAR+ + G A + F
Sbjct: 355 GLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGVAISIF 230
>17544
Length = 1047
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Frame = +2
Query: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
+ G + P + +F E + + I + +PT +Q P+ L D++ AQTG
Sbjct: 596 VEATGDSPPPHINSFEECTLGEIIRNNIVLSKYNKPTPVQKFALPIVLGKRDLMACAQTG 775
Query: 142 SGKTLSYLLPAIVHI------------NHQPFLERGDGPICLVLAPTRELXXXXXXXXXE 189
SGKT ++LLP + + N R PI L+LAPTREL +
Sbjct: 776 SGKTAAFLLPILNQVYENGPTPEALQQNQSRGYRRKMYPIALILAPTRELASQIYDEARK 955
Query: 190 YCRACRLKSTCIYGGAPKGPQIRDLERGV 218
+ RL+ +YGGA G Q+RDL++G
Sbjct: 956 FAYRSRLRPCVVYGGADIGAQMRDLDKGC 1042
>00617
Length = 1505
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = -3
Query: 371 IHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIG 430
+H Q+ R L+ FK + ILI+TDVASRGLD+ V +IN++ PN DY+HR+G
Sbjct: 1467 LHSMIPQRFRLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDYVHRVG 1288
Query: 431 RTARSTKTGTAYTFFTPNNIKQVSDLIS 458
RTAR+ + G + + T +IK + + S
Sbjct: 1287 RTARAGRCGQSISLVTEFDIKLIKSIES 1204
>17708
Length = 882
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%)
Frame = +1
Query: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELXXXXXXXXXEYCR 192
D++G A+TGSGKTL++L+PAI + F+ R +G C++++PTREL E +
Sbjct: 556 DLMGAAKTGSGKTLAFLIPAIELMYKLKFMPR-NGTGCIIISPTRELSMQTFNVLTELLK 732
Query: 193 ACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 233
I GG + +++ L++GV I +ATPGRL+D L+
Sbjct: 733 YHHHTFGLIMGGVNRHDEVKKLKKGVNIIVATPGRLLDHLQ 855
>19525
Length = 585
Score = 74.3 bits (181), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Frame = +2
Query: 171 LVLAPTRELXXXXXXXXXEYCRACRLKSTCIYGGAPKGPQIRDLERGVEIC----IATPG 226
LVL PTREL + + ++ S C+ G G I+ E + +C +ATPG
Sbjct: 23 LVLVPTRELAVQVYQVGQQISQYTKI-SICLAAG---GLDIKGQEAALRLCPDIVVATPG 190
Query: 227 RLIDFLECGKT-NLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
RLID L + LVLDEADRMLD F Q+ +I+ RQT+++SAT
Sbjct: 191 RLIDHLHNAPNFTIAHVEILVLDEADRMLDEYFAAQMTEIIRMCNFQRQTMLFSATMSDA 370
Query: 286 VRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKE---- 341
V+ LA LK+ A+++ N N D+ ++++ +R+ E ++E
Sbjct: 371 VQDLASVSLKE-------AVKVFVNQN----TDIALGLQQE--FVRIRENKEGDREAIVS 511
Query: 342 --------NKTIVFVETK 351
+K +VF++TK
Sbjct: 512 SLVSRTFCDKCMVFLQTK 565
>11624
Length = 2257
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%)
Frame = -1
Query: 378 QERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTK 437
+ R +L +F GK +L+ +D +RG+DV++VK+VI+YD P + YIHR+GRTAR+ +
Sbjct: 790 ERRKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNPPYIKTYIHRVGRTARAGR 611
Query: 438 TGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQL 474
GTA + K+ ++REA + K ++L
Sbjct: 610 AGTAISLLEK---KEFFHFKQMMREAGKWKKIKEMKL 509
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Frame = -3
Query: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ--PFLERGDGPICLVLAPTRELXXXXXXXXXEY 190
D+ A TGSGKTL+Y LP I + + P + +++ P R+L Y
Sbjct: 1811 DICVSAPTGSGKTLAYTLPIIQCLKQRMVPHVR------AVIVLPVRDLAEQVYQVFCHY 1650
Query: 191 CRACRLKSTCIYGGAPKGPQIRDLERG---------VEICIATPGRLIDFLECGKT-NLR 240
C LK + G + L + ++I +ATPGRL+D + +L
Sbjct: 1649 CADTPLKVGIVVGKTVFNVEQDTLVKKRYGGVYHSVIDILVATPGRLVDHINSTPGFDLS 1470
Query: 241 RTTYLVLDEADRMLD 255
+LV+DEADRM++
Sbjct: 1469 HLRFLVIDEADRMME 1425
>39583
Length = 234
Score = 68.9 bits (167), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 43/57 (75%)
Frame = -3
Query: 379 ERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARS 435
+R L FK G+ +L+ATD+ASRGLD+E VK VIN+ P++ + Y+HR+GRTAR+
Sbjct: 175 QRLEALKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTLKHYVHRVGRTARA 5
>11160
Length = 646
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Frame = -1
Query: 214 LERGVEICIATPGRLIDFL---ECG---KTNLRRTTYLVLDEADRMLDMGFEPQIRKIVD 267
++ G I IATPGRL D E G +++ LVLDEADR+LDMGFE I I+
Sbjct: 610 MKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLLDMGFEASINTILG 431
Query: 268 QIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNI---LQIVDVCHDVE 324
+ R+T ++SAT EV L L++ + + + +L+ + + + VE
Sbjct: 430 HLPKLRRTGLFSATQTDEVENLIRAGLRNPLRVTVKEKKLAGEADQRTPSTLSNYYMIVE 251
Query: 325 KDEKLIRLMEEIMSEKENKTIVFVETKRRCDE----LTRKMRRDGWPAMGIHGDKSQQER 380
+EK +L++ + + +K ++F T D LT+ ++ + IH K +Q+R
Sbjct: 250 AEEKFSQLVKFLKTHHRDKLLLFFSTCACVDYFSMCLTQLLKH--MQVLSIHS-KMKQKR 80
Query: 381 DWVL 384
+ L
Sbjct: 79 NLCL 68
>10649
Length = 472
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 42/87 (48%)
Frame = +1
Query: 362 RRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNS 421
R G + +HG Q R + EF + ILI TD+A RGLD V +VI D P
Sbjct: 55 RAAGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLDCPVD 234
Query: 422 SEDYIHRIGRTARSTKTGTAYTFFTPN 448
YIHR GRTAR G A P+
Sbjct: 235 VNTYIHRAGRTARFECNGQALLVLLPS 315
>03381
Length = 1206
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +3
Query: 405 LDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREAN 464
LD+ ++ V+NYD + + HR+GRT R+ + G+AYT T + + L+ L AN
Sbjct: 3 LDIPHIRTVVNYDVARDIDTHTHRVGRTGRAGEKGSAYTLITDKDKEFAPLLVRNLEGAN 182
Query: 465 QAINPKLLQLV 475
Q P LL L
Sbjct: 183 QTPPPALLDLA 215
>19151
Length = 625
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = -3
Query: 394 ILIATDVASRGLDVEDVKFVINYDYP------NSSEDYIHRIGRTARSTKTGTAYTFF 445
+LI T+V SRG+D+E V V+N+D P E Y+HRIGRT R K+G A
Sbjct: 620 VLITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIAINLI 447
>31220
Length = 818
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +2
Query: 401 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVL 460
ASRG+D + V VIN+D+P YIHR GRTAR TG+ +F + +K++
Sbjct: 161 ASRGIDFQGVNNVINFDFPLDVTSYIHRAGRTARGNNTGSVLSFVS---VKELP------ 313
Query: 461 REANQAINPKL 471
NQA+ KL
Sbjct: 314 --INQAVEEKL 340
>33083
Length = 1931
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 403 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARST-KTGTAYTFFTPNNI 450
RGLD+ V +++ YD P+ S++YIHR+GRTAR +G A P +
Sbjct: 1 RGLDIPQVDWIVQYDPPDESKEYIHRVGRTARGEGSSGKALLLLQPEEL 147
>11423
Length = 1434
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = -2
Query: 411 KFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPK 470
K+VI+YD P + YIHR+GRTAR+ + GTA + K+ ++REA + K
Sbjct: 1397 KYVISYDNPPYIKTYIHRVGRTARAGRAGTAISLLEK---KEFFHFKQMMREAGKWKKIK 1227
Query: 471 LLQL 474
++L
Sbjct: 1226 EMKL 1215
>06438
Length = 989
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 26/53 (49%)
Frame = +1
Query: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPN 448
+ +A RGLD V +VI D P YIHR GRTAR G A P+
Sbjct: 25 LTVTLACRGLDFPAVNWVIQLDCPVDVNTYIHRAGRTARFECNGQALLVLLPS 183
>31899
Length = 453
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = -1
Query: 105 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 164
V++ + F P+ IQ + P+ GLD++ A++G+GKT + + A+ I
Sbjct: 312 VLNGLKNAGFERPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFSVVALEGIE-----TT 148
Query: 165 GDGPICLVLAPTREL 179
LVLAPTRE+
Sbjct: 147 ARSTQVLVLAPTREI 103
>01821
Length = 910
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 395 LIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQV 453
L++T V GLD+ DV ++ YD S + R+GRT R + G T +Q+
Sbjct: 13 LVSTCVGEEGLDIGDVDLIVCYDAHKSPVRLVQRMGRTGRK-RQGRIVMLMTEGKEEQI 186
>22529
Length = 312
Score = 28.9 bits (63), Expect = 6.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 239 LRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLM 277
+R L+LDEA LDM E ++ +D+ R R T++
Sbjct: 6 VRNPKILLLDEATSALDMESEKTVQDALDKARQGRTTIV 122
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|9790221|ref|NP_062741.1| actin related protein 2/3
complex, subunit 1A [Mus musculus]
(370 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03044 440 e-124
20615 216 9e-57
06576 42 4e-04
31474 35 0.038
02948 34 0.074
27681 32 0.43
19498 29 2.6
04874 28 4.2
31384 28 4.4
01598 28 4.4
34005 28 4.7
34947 28 4.8
16105 28 5.2
30108 28 6.6
28312 28 7.7
>03044
Length = 1952
Score = 440 bits (1131), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/398 (53%), Positives = 273/398 (68%), Gaps = 32/398 (8%)
Frame = -2
Query: 4 HQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDWAPK 63
H F ++ +TCHA + DR +ALS N+HEV IYKKNGS+W + L EH +TGIDWAPK
Sbjct: 1798 HSFGVKAVTCHAASGDRNGLALSLNDHEVKIYKKNGSKWQETDTLGEHGQRVTGIDWAPK 1619
Query: 64 SDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVC 123
S+RIVTCGADRNAYVW+ +DG W+P LVILRINRAAT VKWSP ENKFAVGS ARLISV
Sbjct: 1618 SNRIVTCGADRNAYVWTYQDGKWQPHLVILRINRAATCVKWSPEENKFAVGSSARLISVS 1439
Query: 124 YFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPAST 183
Y+E E+ WWVSKHIKKPIRSTV LDWHPNN+L+AAGS DFK RVFS Y+KE + KP
Sbjct: 1438 YYEEEHRWWVSKHIKKPIRSTVTCLDWHPNNILIAAGSTDFKARVFSGYVKETEAKPGPN 1259
Query: 184 PWGSKMPFGQLMSEFXXXXXXXXXXXXXFSASGNRLAWVSHDSTVSVADASKSVQVSTLR 243
WGSKM F LM+EF FS SG ++AWV+HDS+VSV D++ ++ ++
Sbjct: 1258 SWGSKMTFAALMAEF-SNGGGGWVHAVSFSPSGEKIAWVAHDSSVSVGDSTMQNRLVVIK 1082
Query: 244 TEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDD-RGCLTFVSKLDVPKQSIQRN------ 296
FLP + +++VSENS+VAAG+DC PML Y+ +G L+ VSKLD+P++
Sbjct: 1081 DTFLPFMGITWVSENSMVAAGYDCNPMLLTYNSGQGSLSLVSKLDIPQEKAAGTIRQVSM 902
Query: 297 -------------------------MSAMERFRNMDKRATTEDRNTALETLHQNSITQVS 331
++AM RF+++DK+A++ D +T L+T HQN+ITQVS
Sbjct: 901 EAGGAQAENNGCEEEGDDEEEMEVILNAMNRFKDLDKKASSGDSSTELKTQHQNTITQVS 722
Query: 332 IYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQGLRI 369
+YE K CR+ T+G+DG + +WD +LE SIQ L+I
Sbjct: 721 VYEGTKGQCRRISTSGVDGNIILWDLNSLERSIQALKI 608
>20615
Length = 641
Score = 216 bits (551), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Frame = +1
Query: 149 DWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFXXXXXXXXXX 208
DWHPNNVL+AAGS DFK RVFS Y+KEV+ KP+S WG+KM F LM+EF
Sbjct: 1 DWHPNNVLIAAGSTDFKTRVFSGYVKEVESKPSSNSWGAKMTFSNLMAEF-SNGGGGWVH 177
Query: 209 XXXFSASGNRLAWVSHDSTVSVADASKSVQVSTLRTEFLPLLSVSFVSENSVVAAGHDCC 268
FS SG R+AWV HDS+VSVAD++ ++ ++ FLP + V++VSENS+VAAG DC
Sbjct: 178 SVSFSPSGERIAWVGHDSSVSVADSANENRLVVIKDTFLPFMGVTWVSENSMVAAGFDCN 357
Query: 269 PMLFNYD-DRGCLTFVSKLDVPKQSIQRNMSAMERFRNMDKRATTEDRNTALETLHQNSI 327
P LF YD +G ++ VSKLD+P+Q +SAM FRNMDK A++ +++T L+T HQN+I
Sbjct: 358 PTLFTYDAGKGSVSLVSKLDIPQQKETGTVSAMSHFRNMDKNASSGEKSTELKTQHQNTI 537
Query: 328 TQVSIYEVDKQDCR 341
TQVS+YE K C+
Sbjct: 538 TQVSVYEGTKDKCK 579
>06576
Length = 1547
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 18/170 (10%)
Frame = -2
Query: 9 EPITCHAWNRDRTQ--------IALSPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDW 60
+ ++C AW+ + A + ++H V ++ + K H +K H + + +
Sbjct: 1237 QGVSCLAWSPSTSLSSLDKHLCFAAACDDHSVRVFTSDLKTTNKTHVVKGHTDFVNSVTF 1058
Query: 61 AP-KSDRIVTCGADRNAYVWSQKDGI--WKPTLVILRINRAATFVKWSPLEN-KFAVGSG 116
+P + D++ + G D VW+ KDG VI R+ V W E K VG
Sbjct: 1057 SPTEEDQVXSTGDDLTCRVWTGKDGQDGRYGESVIFRLTAPGMAVCWHADEPLKLMVGQK 878
Query: 117 ARLISVCYFESENDWWVSKHIKKPIRST------VLSLDWHPNNVLLAAG 160
+I +F N ++PI S +L DW +N LL
Sbjct: 877 DGIIR--FFSLSN--------QQPIMSLSCGVSPLLDCDWSKHNCLLVGA 758
>31474
Length = 403
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -3
Query: 13 CHAWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHELKE-HNGHITGIDWAPKSDRIVTCG 71
C AWN T +A ++ + I+ K G W L + H + + W+P + + +
Sbjct: 290 CVAWNPTGTLLASCGSDKIIKIWGKEGDNWVCKSTLTDAHTRTVRSLGWSPCGNYLSSAS 111
Query: 72 ADRNAYVWSQKDG 84
D VWS+K G
Sbjct: 110 FDATTAVWSRKGG 72
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -3
Query: 48 LKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGIW--KPTLVILRINRAATFVKWS 105
L H+ H + W P + +CG+D+ +W ++ W K TL R + WS
Sbjct: 317 LSAHDEHAWCVAWNPTGTLLASCGSDKIIKIWGKEGDNWVCKSTLTDAH-TRTVRSLGWS 141
Query: 106 PLENKFAVGS 115
P N + S
Sbjct: 140 PCGNYLSSAS 111
>02948
Length = 1207
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = -2
Query: 51 HNGHITGIDWAPKSD-RIVTCGADRNAYVWSQKDGI-------WKPTLVILRINRAATF 101
H G +TG+ P + ++++CG D N VW+ DG+ + P ++ ++ + TF
Sbjct: 1200 HRGQVTGLALNPANKLQLLSCGLDGNINVWAYVDGVLLRSYSHYMPLHALVSVDXSGTF 1024
>27681
Length = 465
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Frame = +2
Query: 104 WSPLENKFAVGSGARLISVCYFESEN----DWWVSKH-IKK-----PIRSTVLSLDWHPN 153
W+P + A GSG + SE + V +H I+K P V SLDW+
Sbjct: 17 WNPTNDLLASGSGDSTARIWNMTSETPNNANQLVLRHCIQKGGTEVPSNKDVTSLDWNSE 196
Query: 154 NVLLAAGSCDFKCRVF 169
LLA GS D R++
Sbjct: 197 GTLLATGSYDGYARLW 244
>19498
Length = 903
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Frame = -1
Query: 41 QWTKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAAT 100
W L+ H G + + W+P+ + +C D VW+ + + ++R +
Sbjct: 642 HWRSVATLRGHAGDVLDLAWSPQDLWLASCSVDNTIVVWNALK--FSEQVAVIRGHAGMV 469
Query: 101 -FVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIR-----STVLSLDWHPNN 154
V W P+ A S + + V +DW +K + + VL L+W P+
Sbjct: 468 KGVTWDPVGRYLASQSDDKTLRV---WRTSDWKEETCVKSCFKECGGTTHVLRLNWSPDG 298
>04874
Length = 1991
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -3
Query: 107 LENKFAVGSGARLISVCYFE-SENDWWVS 134
L+ K+A+ R ISVC F+ S +DW+VS
Sbjct: 669 LDPKYAMSFICREISVCLFKSSHDDWYVS 583
>31384
Length = 474
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -1
Query: 29 NHEVHIYKKNGSQWTKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVW 79
+++V ++ S T + H G + +DW+ ++ T D+ A VW
Sbjct: 204 DNKVSCWEVQQSGQTIPKAQQTHTGPVLDVDWSDDGTKVFTASCDKTAKVW 52
>01598
Length = 1545
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +1
Query: 61 APKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLE-NKFAVGSGARL 119
P S + T DR +W + + + + V+ SP++ + AVG G +
Sbjct: 406 GPDSKTLCTFAQDRQVVLWDLE--TMEAVASMATLGGHVYCVRTSPIDPGRVAVGVGDSM 579
Query: 120 ISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPN-NVLLAAGSCDFKCRVF 169
I ++ + + + + I+S V ++ WHP L G+ D + VF
Sbjct: 580 IRTWNMSNKTNPYDVTTLWQGIKSKVTAVAWHPTKEGWLGFGTDDGRIGVF 732
>34005
Length = 456
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 55 ITGIDWAPKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAAT-FVKWSPLENK-FA 112
+ G+ W+P + + + D + +W G+ P L L ++AA V W P + + A
Sbjct: 121 VCGLSWSPDATFLASGSNDNSVNIWDSTLGMDVPPLHTLTSHQAAVKAVAWCPWQTRMLA 300
Query: 113 VGSG 116
G G
Sbjct: 301 TGGG 312
>34947
Length = 197
Score = 28.5 bits (62), Expect = 4.8, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 3 LHQFLLEPITCHAWNRDRTQIALSPNN-HEVH 33
LH L P H W +DRT L+P N H +H
Sbjct: 36 LHCRLRHPFA*HTWGQDRTVNILNPANIHNIH 131
>16105
Length = 960
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Frame = -2
Query: 51 HNGHITGIDWAPKSDRIVTCGADR-NAYVWSQKD-----GIWKPTLVILRINRAATFVKW 104
H G + I W P +D ++ +D VW D + P + ++ + + W
Sbjct: 578 HKGAVLDIQWCPHNDNVIASASDDCTVKVWQIPDSGLVTNLTDPVVDLVGHQKRCCLIVW 399
Query: 105 SPLENKFAVGSGA 117
P V +GA
Sbjct: 398 HPSAQNVLVSAGA 360
>30108
Length = 1032
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 PITCHAWNRDRTQIALSPNNHEVHI-YKKNGSQWTKAHELKEHNGHITGIDWAPKSDRIV 68
P+ AW+ T+ AL+ ++ VH+ Y + H+L++ H+ W P S ++
Sbjct: 106 PVRAFAWHPHTTKFALALQDNSVHVHYSASTLVPVLKHKLQKSVAHLA---WQPLSASVL 276
Query: 69 TCGADRNAYVW 79
+W
Sbjct: 277 AVACQSAVLIW 309
>28312
Length = 698
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +2
Query: 16 WNRDRTQIAL-SPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDWAPKSDRIVTCGADR 74
WN T+ +P + ++HI K ++ + LK G DW + C DR
Sbjct: 62 WNLKETRFCFWTPRSEKIHILSKMCGTLSECNHLKRSVGLDCMRDWYRNWECYECCQGDR 241
Query: 75 -NAYVWSQKDGIWKPTLVIL 93
N YV G+ ++L
Sbjct: 242 CNFYVTLGASGVTSSVTLLL 301
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|126723461|ref|NP_033970.3| chaperonin subunit 8
(theta) [Mus musculus]
(548 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05356 439 e-123
01159 194 8e-50
06409 144 9e-35
12796 129 4e-30
29631 75 8e-29
09900 107 1e-23
29864 72 6e-13
02673 68 1e-11
33770 60 3e-09
34332 56 3e-08
30661 54 1e-07
15785 47 2e-05
>05356
Length = 2339
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/300 (68%), Positives = 246/300 (82%)
Frame = +2
Query: 1 MALHVPKAPGFAQMLKDGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINRL 60
MA+HVP+APGFAQMLKDGAKHFSGL+EAVYRNI+ACKELA+TTR+AYGP+G NKMVIN L
Sbjct: 191 MAMHVPRAPGFAQMLKDGAKHFSGLDEAVYRNIEACKELAKTTRSAYGPHGQNKMVINHL 370
Query: 61 EKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFXXXXXXXXXXXXR 120
EKLFVTNDAATILRELEVQHPAAKM+V+A+H QEQE GDGTNFVLVF R
Sbjct: 371 EKLFVTNDAATILRELEVQHPAAKMLVLAAHQQEQECGDGTNFVLVFAGALLENAEQLLR 550
Query: 121 IGLSVSEVISGYEIACKKAHEILPELVCCSAKNLRDVDEVSSLLRTSIMSKQYGSETFLA 180
+GLSV+EVI GYE+A KKAHEILP+LV KNLR+ +EV + +RTS+MSKQYG+E FLA
Sbjct: 551 MGLSVTEVIEGYELALKKAHEILPKLVIGHVKNLRNKEEVKTAIRTSVMSKQYGNEDFLA 730
Query: 181 KLIAQACVSIFPDSGNFNVDNIRVCKILGSGIYSSSVLHGMVFKKETEGDVTSVKDAKIA 240
LI ACVS+ P +F+VDN+RVCKILG G+ SS + GMVFK++ EG++T V+ AK+A
Sbjct: 731 DLITDACVSVLPAKISFSVDNVRVCKILGCGLLQSSTIQGMVFKRQVEGEITKVEKAKVA 910
Query: 241 VYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIAGTGANVIVTGGKVADI 300
V++CP D M TETKGTVLIK AEELM+FSKGEE++M+ Q+K I G NVIV GGK A +
Sbjct: 911 VFTCPLDSMQTETKGTVLIKNAEELMSFSKGEEDMMEEQIKGIKEAGVNVIVAGGKSAXL 1090
Score = 330 bits (845), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 150/243 (61%), Positives = 195/243 (80%)
Frame = +1
Query: 285 GTGANVIVTGGKVADIALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPKLTPPVQEEM 344
G+ + G+V D+A HY NKY +M++RL SKWDLRRLCK++ ATALPK+T P EE
Sbjct: 1042 GSWRQCDCSWGEVGDLAQHYCNKYKVMVIRLLSKWDLRRLCKSICATALPKVTTPRNEEC 1221
Query: 345 GHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTR 404
G+CD VY+ E+G+T VV+F+ K++ I+T+++RGSTDN+MDDIERA+DDGVNTFK LT+
Sbjct: 1222 GYCDLVYVDEIGETPVVIFQQNKDESPITTVIIRGSTDNIMDDIERALDDGVNTFKALTK 1401
Query: 405 DKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVI 464
D RLVPG GATEIELAKQIT+YGE+ PGLEQYA+KKFAE+ E IPRALAEN+G+KA +++
Sbjct: 1402 DDRLVPGAGATEIELAKQITTYGESLPGLEQYAVKKFAESLEVIPRALAENTGMKATDIL 1581
Query: 465 SKLYSVHQEGNKNVGLDIEAEVPAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQI 524
SKLY+ HQEG +N G+DI+ + +V D +A++ D YL +YW +K A AA TVLRVDQI
Sbjct: 1582 SKLYAAHQEGQQNAGVDID-DSGSVLDAKQANLTDLYLNRYWGLKFAAAAACTVLRVDQI 1758
Query: 525 IMA 527
IMA
Sbjct: 1759 IMA 1767
>01159
Length = 2613
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 151/516 (29%), Positives = 258/516 (50%), Gaps = 7/516 (1%)
Frame = +3
Query: 16 KDGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINRLEKLFVTNDAATILRE 75
+D +G+E A +I A K +A +T+ GP G++KM+++ + VTND ATIL
Sbjct: 156 QDKKSRLTGIE-AHKSHILAAKSVASILKTSLGPKGLDKMMVSGDGDVTVTNDGATILDM 332
Query: 76 LEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFXXXXXXXXXXXXRIGLSVSEVISGYEIA 135
++V H AK++V S Q+ E+GDGT V+V G+ + GYEIA
Sbjct: 333 MDVDHQIAKLMVQLSKSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEIA 512
Query: 136 CKKAHEILPELVCCSAKNLRDVDEVSSLLRTSIMSKQYGS-ETFLAKLIAQACVSIFPDS 194
K A E L ++ +L++ + + L T++ SK +AK+ A +S+ D
Sbjct: 513 AKCAVETLDKISDNYEVDLKNAEPLIKLAMTTLGSKIVNRCHRQMAKIAVDAIMSV-ADL 689
Query: 195 GNFNVDN--IRVCKILGSGIYSSSVLHGMVFKKETEGDVTS--VKDAKIAVYSCPFDGMI 250
+VD I+V +G + + ++ G+V K+ VKDAKIA+ +CPF+
Sbjct: 690 KRKDVDFELIKVEGKVGGKLEDTMLVKGVVVDKDMSHPQMPKVVKDAKIAILTCPFEPPK 869
Query: 251 TETKGTVLIKTAEELMNFSKGEENLMDAQVKAIAGTGANVIVTGGKVADIALHYANKYNI 310
+TK + I + E+ + E N ++ V+++ GAN+++ D A H + +
Sbjct: 870 PKTKHKLDITSVEDYKKLREYELNKFESMVQSVKDKGANLVICQWGFDDEANHLLLQREL 1049
Query: 311 MLVRLNSKWDLRRLCKTVGATALPKLTPPVQEEMGHCDSVYLSEVGDT--QVVVFKHEKE 368
VR ++ + G +P+ E++G V G T +++V +
Sbjct: 1050PAVRWVGGPEIELIAIATGGRIVPRFEELTTEKLGKAGIVRELTFGTTKDRMLVIEECLN 1229
Query: 369 DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGE 428
A+ TI +RG ++++ +R++ D + + L RD R+V GGGA EI + + +
Sbjct: 1230TRAV-TIFIRGGNKMIVEEAKRSLHDALCVIRNLVRDNRVVYGGGAPEIAASVAVAEAAD 1406
Query: 429 TCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEVPA 488
LEQYA++ F+EA EA+P ALAENSG+ + ++++ S Q KN L I+ +
Sbjct: 1407KISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKS-RQVKEKNPRLGIDCLLKG 1583
Query: 489 VKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQI 524
DM E ++++T K I LAT +L++D I
Sbjct: 1584TNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDI 1691
>06409
Length = 1533
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 156/302 (51%), Gaps = 5/302 (1%)
Frame = -3
Query: 229 GDVTSVKDAKIAVYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIAGTGA 288
G + V+ AKI T+ + V++ ++ + E N + VK I G
Sbjct: 1507 GGPSKVEKAKIGFIQFCISPPKTDMENQVIVSDYTQMDRVLREERNYILDIVKKIKKAGC 1328
Query: 289 NVI-----VTGGKVADIALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPKLTPPVQEE 343
NV+ + V+D+ALH+ K IM+V+ + D+ +CKT+G + L + E
Sbjct: 1327 NVLLIQKSILRDAVSDLALHFLAKMKIMVVKDIEREDVEFVCKTLGCRPVASLDHFLPEN 1148
Query: 344 MGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLT 403
+G D + + G +++V G T+++RGS ++++ +R++ D + + L
Sbjct: 1147 LGSADLIEEVQTGSSKIVKATGIANPGQTVTVLIRGSNKLVLEEADRSLHDALCVIRCLV 968
Query: 404 RDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEV 463
+ K L+ GGGA E E++ ++ +Y T G+EQY + FAEA E IP LAEN+G+
Sbjct: 967 KKKALIAGGGAPETEMSMRLAAYANTLAGMEQYCFRAFAEALEVIPFTLAENAGLNPIST 788
Query: 464 ISKLYSVHQEGNKNVGLDIEAEVPAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQ 523
++ L + H +G + G+++ A+ ++LE ++L L AI LA+ ++L++D
Sbjct: 787 VTXLRTRHAQGERTAGINVRK--GAITNILEENVLQPLLVSTSAITLASETVRSILKIDD 614
Query: 524 II 525
I+
Sbjct: 613 IV 608
>12796
Length = 1316
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 166/337 (49%), Gaps = 7/337 (2%)
Frame = -3
Query: 196 NFNVDNIRVCKILGSGIYSSSVLHGMVFKKETEGD--VTSVKDAKIAVYSCPFDGMITET 253
+ ++ NI+V + LG + + +++G+VF + G ++ AKI + T+
Sbjct: 1311 SVDLKNIKVIRSLGGTVEDTELVNGLVFTSRSAGTNAPKRIEKAKIGLIQFCISAPKTDM 1132
Query: 254 KGTVLIKTAEELMNFSKGEENLMDAQVKAIAGTGANVI-----VTGGKVADIALHYANKY 308
V++ + K E + + VK I G NV+ + V+D+A H+ +K
Sbjct: 1131 DHNVIVSDYAAMDRVLKEERSYILNIVKQIKKAGCNVLLVQKSILRDAVSDLAQHFLDKI 952
Query: 309 NIMLVRLNSKWDLRRLCKTVGATALPKLTPPVQEEMGHCDSVYLSEVGDTQVVVFKHEKE 368
++V+ + D+ +CKT+ + L E M D V G + V +
Sbjct: 951 KCLVVKDVEREDIEFVCKTLHCRPIASLDHFTAENMSSADLVEEVASGTNKFVKITGIQN 772
Query: 369 DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGE 428
G +I+ RGS ++++ R++ D + + L R++ + GGGA EIE+A Q+ + +
Sbjct: 771 QGRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVRNRAQIVGGGAPEIEMALQLAAAAQ 592
Query: 429 TCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEVPA 488
T G++ Y + FA+A E IP LAEN+G+ +++L + H +G KN G+++ A
Sbjct: 591 TVDGVDAYCYRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRK--GA 418
Query: 489 VKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQII 525
+ D+ +++ L AI LAT ++L++D I+
Sbjct: 417 ITDIFAENVVQPLLVSTSAITLATETVRSILKIDDIV 307
>29631
Length = 1257
Score = 74.7 bits (182), Expect(3) = 8e-29, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%)
Frame = +3
Query: 32 NIQACKELAQTTRTAYGPNGMNKMVINRLEKLFVTNDAATILRELEVQHPAAKMIVMASH 91
NI A K +A RT GP M KM+++ + + +TND ILRE+ VQHPAAK ++ +
Sbjct: 60 NIAAGKTIADVIRTCLGPKSMLKMLMDPMGGIVMTNDGNAILREINVQHPAAKSMIEVAR 239
Query: 92 MQEQEVGDGTNFVLVFXXXXXXXXXXXXRIGLSVSEVISGYEIACKKAHEILPELVC 148
Q++E GDGT V++ + + +I+ Y A + E+L +C
Sbjct: 240 TQDEETGDGTKSVIILAGEVLSVAEQFLEQQMHPTVIIAAYRQALEDTLEVLRTKIC 410
Score = 46.6 bits (109), Expect(3) = 8e-29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Frame = +3
Query: 354 EVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 413
++GD K A TI+LRG++ +++ ++ER + D +N + + D L PGGG
Sbjct: 1047 KIGDDYFTFLVDCKSPKA-CTILLRGASKDILAEVERNLQDAMNVARNVMIDPHLCPGGG 1223
Query: 414 ATEIELAKQIT 424
A+E+ LA+ +
Sbjct: 1224 ASEMALAQALN 1256
Score = 44.3 bits (103), Expect(3) = 8e-29, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Frame = +1
Query: 178 FLAKLIAQAC-------VSIF-PDSGNFNVDNIR---VCKILGSGIYSSSVLHGMVFKKE 226
F++K + AC ++F ++G +D R V KI G + S VL G+ K+
Sbjct: 478 FISKWMDLACQIALDATTTVFMEENGRKEIDIKRYAKVEKIPGGTMEESEVLKGIXVNKD 657
Query: 227 T--EGDVTSVKDAKIAVYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIA 284
+++ +I + C + E+ + I E+ + EE + I
Sbjct: 658 VVHXKMKRRIENPRIMLLDCNLEYKKGESATNIEISKEEDFAKILQLEEEYIRKMCDEII 837
Query: 285 GTGANVIVTGGKVADIALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPKLTPPVQEEM 344
++++T V+D+A H+ K I ++R K D R+ + GAT + +E+M
Sbjct: 838 ALKPDLVITEKGVSDLAQHFLLKAGISVLRRVRKTDNNRIARACGATIANRTDELKEEDM 1017
Query: 345 G 345
G
Sbjct: 1018G 1020
>09900
Length = 1305
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 3/272 (1%)
Frame = +3
Query: 257 VLIKTAEELMNFSKGEENLMDAQVKAIAGTGANVIVTGGKVADIALHYANKYNIMLVRLN 316
V + +E + E ++ ++ I +GA V+++ + D+A Y ++
Sbjct: 117 VRVDNVQEYQSIVDAEWKILYDKLDKIHQSGAKVVLSKLPIGDVATQYFADRDMFCAGRV 296
Query: 317 SKWDLRRLCKTVGA---TALPKLTPPVQEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAIS 373
+ DLRR K G T + LTP V +G C ++G + +FK
Sbjct: 297 PEEDLRRTMKACGGSIQTTVQSLTPDV---LGTCQLFDEIQIGGERFNMFKGCTM-ARTC 464
Query: 374 TIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGL 433
TI+LRG + M++ ER++ D + + ++ +V GGGA E+E++ + + T G
Sbjct: 465 TIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMEVSYHLREHSHTIAGK 644
Query: 434 EQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEVPAVKDML 493
EQ + +A+A E IPR L +N+G A +++KL H +G G++I E + D
Sbjct: 645 EQLLMSAYAKALEVIPRQLCDNAGFDATNILNKLRQKHAQGGTWYGVNILRE--DIADNF 818
Query: 494 EASILDTYLGKYWAIKLATNAAVTVLRVDQII 525
E + + + K A+ A+ A +L VD+ I
Sbjct: 819 EDCVWEPAVVKINALTAASEATALILSVDETI 914
>29864
Length = 1026
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 15/270 (5%)
Frame = +1
Query: 27 EAVYRNIQACKELAQTTRTAYGPNGMNKMVINRLEKLFVTNDAATILRELEVQHPAAKMI 86
+A+ NI A K L R+ GP G KM+++ + +T D +L E+++QHP A +I
Sbjct: 160 QALAVNIAAAKGLQDVLRSNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLI 339
Query: 87 VMASHMQEQEVGDGTNFVLVFXXXXXXXXXXXXRIGLSVSEVISGYEIACKKAHEILPEL 146
+ Q+ GDGT ++ GL + G+E+A KA E+L E+
Sbjct: 340 ARVATAQDDITGDGTTSNVLIIGELLKQADLYIAEGLHPRLITEGFELARNKALEVLEEV 519
Query: 147 VCCSAKNLRDVDE--VSSLLRTSIMSKQYGSETFLAKLIAQ----ACVSIFPDSGNFNVD 200
K R+VD + + RTS+ +K + T LA L+ + A ++I ++
Sbjct: 520 -----KVKREVDRETLVQVARTSLRTKVH---TELADLLTEHVVDAVLAIQXPGEGIDLH 675
Query: 201 NIRVCKILGSGIYSSSVLHGMV---------FKKETEGDVTSVKDAKIAVYSCPFDGMIT 251
+ + ++ S+++ G+V KK T KDA I + + T
Sbjct: 676 MVELMEMQHKTDLDSTLVRGLVMDHGARHPDMKKHT-------KDAFILTCNVSLEYEKT 834
Query: 252 ETKGTVLIKTAEELMNFSKGEENLMDAQVK 281
E KTA+E + E +D +V+
Sbjct: 835 EVNSGFFYKTAQEREKLVEAERTFIDERVR 924
>02673
Length = 1243
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +1
Query: 413 GATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQ 472
GA EI + + + LEQYA++ F+EA EA+P ALAENSG+ + ++++ S Q
Sbjct: 1 GAPEIAASVAVAEAADKISTLEQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKS-RQ 177
Query: 473 EGNKNVGLDIEAEVPAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQI 524
KN L I+ + DM E ++++T K I LAT +L++D I
Sbjct: 178 VKEKNPRLGIDCLLKGTNDMKEQNVIETLTAKKQQILLATQLVRMILKIDDI 333
>33770
Length = 484
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Frame = +1
Query: 65 VTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFXXXXXXXXXXXXRIGLS 124
+TND ATIL++++V HPAAKM+V S Q+ E GDGT V+V G+
Sbjct: 34 ITNDGATILKQMQVLHPAAKMLVELSKAQDIEXGDGTTTVVVLAGSLLDASAKLLAKGIH 213
Query: 125 VSEVISGYEIACKKAHEILPELVCCSAKNLRDVDEVSSLLRTSIMSK---QYGSETFLAK 181
+ + ++ A K E+L +V L D + + S TS+ SK QY S LA
Sbjct: 214 PTMISEAFQKAASKCVELLDGMV--KPLELSDRESLLSSASTSLNSKVVSQYSS--MLAP 381
Query: 182 LIAQACVSIFPDSGNFNVD--NIRVCKILGSGI 212
+ A + + + NVD +I++ K LG I
Sbjct: 382 IAVDAVLKVIDPATATNVDLKDIKIIKKLGGTI 480
>34332
Length = 714
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = -1
Query: 413 GATEIELAKQITSYGETCPGLEQYAIKKFAE 443
G EIELAKQIT+YGE+ PGLEQYA+KKFAE
Sbjct: 93 GGKEIELAKQITTYGESLPGLEQYAVKKFAE 1
>30661
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%)
Frame = +3
Query: 339 PVQEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNT 398
P + ++G CD + +G+ +++ F G TIVLRG+T ++D+ R++ D +
Sbjct: 60 PEKTKLGQCDLIEEVMIGEDKLIKFSGVAL-GEACTIVLRGATQQILDEAXRSLHDALCV 236
Query: 399 FKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIP 449
++ R V GGG +E+ +A+ ++ PG K A A EA+P
Sbjct: 237 LSQTVKETRTVYGGGCSEMLMAEAVSQLAAKTPG-------KEAIAMEALP 368
>15785
Length = 402
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = -1
Query: 181 KLIAQACVSIFPDSGNFNVDNIRVCKILGSGIYSSSVLHGMVFKKETEGDVT 232
K+I CV ++ +RVCKILG G+ SS + GMVFK++ EG++T
Sbjct: 126 KII*SVCVHVY----------VRVCKILGCGLLQSSTIQGMVFKRQVEGEIT 1
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6753324|ref|NP_033968.1| chaperonin containing Tcp1,
subunit 6a [Mus musculus]
(531 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29864 439 e-123
01159 217 1e-56
05356 89 2e-34
09900 108 6e-24
29631 100 2e-21
06409 89 6e-18
33770 85 6e-17
12796 82 6e-16
17249 45 5e-05
30661 28 8.2
>29864
Length = 1026
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/273 (76%), Positives = 245/273 (89%)
Frame = +1
Query: 1 MAAVKTLNPKXXXXXXXXXXXVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 60
M+A+K LNPK VNI+AA+GLQDVLR+NLGPKGTMKMLVSGAGDIKLTKDG
Sbjct: 109 MSAIKQLNPKAEVARASQALAVNIAAAKGLQDVLRSNLGPKGTMKMLVSGAGDIKLTKDG 288
Query: 61 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 120
NVLLHEMQIQHPTASLIA+VATAQDDITGDGTTSNVLIIGELLKQADLYI+EGLHPR+IT
Sbjct: 289 NVLLHEMQIQHPTASLIARVATAQDDITGDGTTSNVLIIGELLKQADLYIAEGLHPRLIT 468
Query: 121 EGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIR 180
EGFE A+ KAL+ LE+VKV +E+DRETL+ VARTSLRTKVH ELAD+LTE VVD++LAI+
Sbjct: 469 EGFELARNKALEVLEEVKVKREVDRETLVQVARTSLRTKVHTELADLLTEHVVDAVLAIQ 648
Query: 181 KKDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYE 240
E IDL MVE+MEM+HK++ D++L+RGLV+DHGARHPDMKK ++A+ILTCNVSLEYE
Sbjct: 649 XPGEGIDLHMVELMEMQHKTDLDSTLVRGLVMDHGARHPDMKKHTKDAFILTCNVSLEYE 828
Query: 241 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKK 273
KTEVNSGFFYK+A+EREKLV+AER FI++RV+K
Sbjct: 829 KTEVNSGFFYKTAQEREKLVEAERTFIDERVRK 927
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +2
Query: 184 EPIDLFMVEIMEMKHKSETDTSLIRG 209
E IDL MVE+MEM+HK++ D++L+RG
Sbjct: 2 EGIDLHMVELMEMQHKTDLDSTLVRG 79
>01159
Length = 2613
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 267/510 (52%), Gaps = 11/510 (2%)
Frame = +3
Query: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVAT 82
+I AA+ + +L+T+LGPKG KM+VSG GD+ +T DG +L M + H A L+ +++
Sbjct: 201 HILAAKSVASILKTSLGPKGLDKMMVSGDGDVTVTNDGATILDMMDVDHQIAKLMVQLSK 380
Query: 83 AQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKE 142
+QDD GDGTT V++ G LL+QA+ + G+HP I +G+E A + A++ L+++ + E
Sbjct: 381 SQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEIAAKCAVETLDKISDNYE 560
Query: 143 MD---RETLIDVARTSLRTKV----HAELADVLTEAVVDSILAIRKKDEPIDLFMVEIME 195
+D E LI +A T+L +K+ H ++A + +A++ S+ +++KD +L VE +
Sbjct: 561 VDLKNAEPLIKLAMTTLGSKIVNRCHRQMAKIAVDAIM-SVADLKRKDVDFELIKVE-GK 734
Query: 196 MKHKSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEE 255
+ K E DT L++G+V+D HP M K V++A I E K + S E+
Sbjct: 735 VGGKLE-DTMLVKGVVVDKDMSHPQMPKVVKDAKIAILTCPFEPPKPKTKHKLDITSVED 911
Query: 256 REKLVKAERKFIEDRVKKIIELKKKVCGDSDKGF-VVINQKGIDPFSLDALAKEGIVALR 314
+KL + E E V+ + DKG +VI Q G D + L + + A+R
Sbjct: 912 YKKLREYELNKFESMVQSV----------KDKGANLVICQWGFDDEANHLLLQRELPAVR 1061
Query: 315 RAKRRNMERLTLACGGIALNSFDDLNPDCLGHAGLVYEYTLG--EEKFTFIEKCNNPRSV 372
+E + +A GG + F++L + LG AG+V E T G +++ IE+C N R+V
Sbjct: 1062WVGGPEIELIAIATGGRIVPRFEELTTEKLGKAGIVRELTFGTTKDRMLVIEECLNTRAV 1241
Query: 373 TLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPXXXXXXXXXXXXXIKYKPSVKGR 432
T+ ++G NK + + K ++ D L ++N + D VV + +
Sbjct: 1242TIFIRGGNKMIVEEAKRSLHDALCVIRNLVRDNRVVYGGGAPEIAASVAVAEAADKISTL 1421
Query: 433 AQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEH-SESGQLVGVDLSTGEPMVAAE 491
Q V++F++AL +P LA+NSG +TL +V++ E +G+D E
Sbjct: 1422EQYAVRSFSEALEAVPLALAENSGLAPIQTLAEVKSRQVKEKNPRLGIDCLLKGTNDMKE 1601
Query: 492 MGVWDNYCVKKQLLHSCTVIATNILLVDEI 521
V + KKQ + T + IL +D+I
Sbjct: 1602QNVIETLTAKKQQILLATQLVRMILKIDDI 1691
>05356
Length = 2339
Score = 88.6 bits (218), Expect(2) = 2e-34, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 6/260 (2%)
Frame = +2
Query: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVAT 82
NI A + L R+ GP G KM+++ + +T D +L E+++QHP A ++ A
Sbjct: 284 NIEACKELAKTTRSAYGPHGQNKMVINHLEKLFVTNDAATILRELEVQHPAAKMLVLAAH 463
Query: 83 AQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQV---KV 139
Q+ GDGT ++ G LL+ A+ + GL + EG+E A +KA + L ++ V
Sbjct: 464 QQEQECGDGTNFVLVFAGALLENAEQLLRMGLSVTEVIEGYELALKKAHEILPKLVIGHV 643
Query: 140 SKEMDRETLIDVARTSLRTKVHAE---LADVLTEAVVDSILAIRKKDEPIDLFMVEIMEM 196
++E + RTS+ +K + LAD++T+A V + A K +D V + ++
Sbjct: 644 KNLRNKEEVKTAIRTSVMSKQYGNEDFLADLITDACVSVLPA--KISFSVD--NVRVCKI 811
Query: 197 KHKSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEER 256
+S I+G+V K + TC L+ +TE K+AEE
Sbjct: 812 LGCGLLQSSTIQGMVFKRQVEGEITKVEKAKVAVFTC--PLDSMQTETKGTVLIKNAEEL 985
Query: 257 EKLVKAERKFIEDRVKKIIE 276
K E +E+++K I E
Sbjct: 986 MSFSKGEEDMMEEQIKGIKE 1045
Score = 75.5 bits (184), Expect(2) = 2e-34, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 2/220 (0%)
Frame = +1
Query: 307 KEGIVALRRAKRRNMERLTLACGGIALNSFDDLNPDCLGHAGLVYEYTLGEEKFTFIEKC 366
K ++ +R + ++ RL + AL + G+ LVY +GE ++
Sbjct: 1108 KYKVMVIRLLSKWDLRRLCKSICATALPKVTTPRNEECGYCDLVYVDEIGETPVVIFQQN 1287
Query: 367 NNPRSVT-LLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPXXXXXXXXXXXXXIKY 425
+ +T ++++G + + I+ A+ DG+ K D +VP Y
Sbjct: 1288 KDESPITTVIIRGSTDNIMDDIERALDDGVNTFKALTKDDRLVPGAGATEIELAKQITTY 1467
Query: 426 KPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDL-STG 484
S+ G Q V+ FA++L +IP+ LA+N+G + L K+ A H E Q GVD+ +G
Sbjct: 1468 GESLPGLEQYAVKKFAESLEVIPRALAENTGMKATDILSKLYAAHQEGQQNAGVDIDDSG 1647
Query: 485 EPMVAAEMGVWDNYCVKKQLLHSCTVIATNILLVDEIMRA 524
+ A + + D Y + L A +L VD+I+ A
Sbjct: 1648 SVLDAKQANLTDLYLNRYWGLKFAAAAACTVLRVDQIIMA 1767
>09900
Length = 1305
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%)
Frame = +3
Query: 234 NVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVIN 293
N+ LE + N+ + +E + +V AE K + D++ KI + KV V++
Sbjct: 75 NIELELKSERDNAEVRVDNVQEYQSIVDAEWKILYDKLDKIHQSGAKV---------VLS 227
Query: 294 QKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGIALNSFDDLNPDCLGHAGLVYEY 353
+ I + A + R ++ R ACGG + L PD LG L E
Sbjct: 228 KLPIGDVATQYFADRDMFCAGRVPEEDLRRTMKACGGSIQTTVQSLTPDVLGTCQLFDEI 407
Query: 354 TLGEEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPXXXX 413
+G E+F + C R+ T++++G + + + + ++ D + V+ AI + VV
Sbjct: 408 QIGGERFNMFKGCTMARTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGA 587
Query: 414 XXXXXXXXXIKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSES 473
++ ++ G+ QL + A+A AL +IP+ L N+GFD L K++ +H++
Sbjct: 588 IEMEVSYHLREHSHTIAGKEQLLMSAYAKALEVIPRQLCDNAGFDATNILNKLRQKHAQG 767
Query: 474 GQLVGVDLSTGEPMVAAEMGVWDNYCVKKQLLHSCTVIATNILLVDEIMR 523
G GV++ + E VW+ VK L + + IL VDE ++
Sbjct: 768 GTWYGVNILREDIADNFEDCVWEPAVVKINALTAASEATALILSVDETIK 917
>29631
Length = 1257
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 77/122 (63%)
Frame = +3
Query: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVAT 82
NI+A + + DV+RT LGPK +KML+ G I +T DGN +L E+ +QHP A + +VA
Sbjct: 60 NIAAGKTIADVIRTCLGPKSMLKMLMDPMGGIVMTNDGNAILREINVQHPAAKSMIEVAR 239
Query: 83 AQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKE 142
QD+ TGDGT S +++ GE+L A+ ++ + +HP +I + A E L+ L + K+
Sbjct: 240 TQDEETGDGTKSVIILAGEVLSVAEQFLEQQMHPTVIIAAYRQALEDTLEVL-RTKICTP 416
Query: 143 MD 144
+D
Sbjct: 417 ID 422
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Frame = +1
Query: 203 DTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKA 262
++ +++G+ ++ H MK+R+EN I+ + +LEY+K E + E+ K+++
Sbjct: 619 ESEVLKGIXVNKDVVHXKMKRRIENPRIMLLDCNLEYKKGESATNIEISKEEDFAKILQL 798
Query: 263 ERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIVALRRAKRRNME 322
E ++I +II LK +VI +KG+ + L K GI LRR ++ +
Sbjct: 799 EEEYIRKMCDEIIALKPD---------LVITEKGVSDLAQHFLLKAGISVLRRVRKTDNN 951
Query: 323 RLTLACGGIALNSFDDLNPDCLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLVKGPNK 381
R+ ACG N D+L + +G GL+ L N PR +GP K
Sbjct: 952 RIARACGATIANRTDELKEEDMGSGCGLLKCARLAMTTSRSWWTANRPRRARSC*EGPAK 1131
Query: 382 HTLTQIKDAIR 392
+ + R
Sbjct: 1132TSWRKWSATCR 1164
>06409
Length = 1533
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 143/316 (45%), Gaps = 8/316 (2%)
Frame = -3
Query: 215 GARHPDMKKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKI 274
GA P ++ + +I C + KT++ + + +++++ ER +I D VKKI
Sbjct: 1513 GAGGPSKVEKAKIGFIQFC---ISPPKTDMENQVIVSDYTQMDRVLREERNYILDIVKKI 1343
Query: 275 IELKKKVCGDSDKGFVVINQKGI-----DPFSLDALAKEGIVALRRAKRRNMERL--TLA 327
KK C V++ QK I +L LAK I+ ++ +R ++E + TL
Sbjct: 1342 ---KKAGCN------VLLIQKSILRDAVSDLALHFLAKMKIMVVKDIEREDVEFVCKTLG 1190
Query: 328 CGGIALNSFDDLNPDCLGHAGLVYEYTLGEEKFTFIEKCNNP-RSVTLLVKGPNKHTLTQ 386
C +A S D P+ LG A L+ E G K NP ++VT+L++G NK L +
Sbjct: 1189 CRPVA--SLDHFLPENLGSADLIEEVQTGSSKIVKATGIANPGQTVTVLIRGSNKLVLEE 1016
Query: 387 IKDAIRDGLRAVKNAIDDGCVVPXXXXXXXXXXXXXIKYKPSVKGRAQLGVQAFADALLI 446
++ D L ++ + ++ Y ++ G Q +AFA+AL +
Sbjct: 1015 ADRSLHDALCVIRCLVKKKALIAGGGAPETEMSMRLAAYANTLAGMEQYCFRAFAEALEV 836
Query: 447 IPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLSTGEPMVAAEMGVWDNYCVKKQLLH 506
IP LA+N+G + T+ ++ H++ + G+++ G E V V +
Sbjct: 835 IPFTLAENAGLNPISTVTXLRTRHAQGERTAGINVRKGAITNILEENVLQPLLVSTSAIT 656
Query: 507 SCTVIATNILLVDEIM 522
+ +IL +D+I+
Sbjct: 655 LASETVRSILKIDDIV 608
>33770
Length = 484
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Frame = +1
Query: 45 KMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLK 104
KM+ + GD+ +T DG +L +MQ+ HP A ++ +++ AQD GDGTT+ V++ G LL
Sbjct: 1 KMIQAANGDVTITNDGATILKQMQVLHPAAKMLVELSKAQDIEXGDGTTTVVVLAGSLLD 180
Query: 105 QADLYISEGLHPRIITEGFEAAKEKALQFLE-QVKVSKEMDRETLIDVARTSLRTKVHAE 163
+ +++G+HP +I+E F+ A K ++ L+ VK + DRE+L+ A TSL +KV ++
Sbjct: 181 ASAKLLAKGIHPTMISEAFQKAASKCVELLDGMVKPLELSDRESLLSSASTSLNSKVVSQ 360
Query: 164 LADVLTEAVVDSILAI 179
+ +L VD++L +
Sbjct: 361 YSSMLAPIAVDAVLKV 408
>12796
Length = 1316
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 140/307 (45%), Gaps = 8/307 (2%)
Frame = -3
Query: 186 IDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEVN 245
+DL ++++ + DT L+ GLV + + KR+E A I + KT+++
Sbjct: 1308 VDLKNIKVIRSLGGTVEDTELVNGLVFTSRSAGTNAPKRIEKAKIGLIQFCISAPKTDMD 1129
Query: 246 SGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDAL 305
++++K ER +I + VK+I KK C V++ QK I ++ L
Sbjct: 1128 HNVIVSDYAAMDRVLKEERSYILNIVKQI---KKAGCN------VLLVQKSILRDAVSDL 976
Query: 306 AKEGI-----VALRRAKRRNMERL--TLACGGIALNSFDDLNPDCLGHAGLVYEYTLGEE 358
A+ + + ++ +R ++E + TL C IA S D + + A LV E G
Sbjct: 975 AQHFLDKIKCLVVKDVEREDIEFVCKTLHCRPIA--SLDHFTAENMSSADLVEEVASGTN 802
Query: 359 KFTFIEKCNNP-RSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPXXXXXXXX 417
KF I N R+V+++ +G NK L + ++ D L V+ + + +
Sbjct: 801 KFVKITGIQNQGRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVRNRAQIVGGGAPEIE 622
Query: 418 XXXXXIKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLV 477
+V G +AFADAL +IP LA+N+G + T+ +++ H++ +
Sbjct: 621 MALQLAAAAQTVDGVDAYCYRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNA 442
Query: 478 GVDLSTG 484
G+++ G
Sbjct: 441 GINVRKG 421
>17249
Length = 909
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Frame = +3
Query: 443 ALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQ--LVGVDLSTGEPMVAAEMGVWDNYCV 500
AL +I + L QN G + TL ++A+H++ GQ G+D +TG + AE G+W+ V
Sbjct: 12 ALEVISRTLIQNCGANTIRTLTALRAKHAQ-GQKNTWGIDGNTGNIVDMAEFGIWEPLSV 188
Query: 501 KKQLLHSCTVIATNILLVDEI------MRAGMS 527
K Q+ + A +L +D+I M A MS
Sbjct: 189 KLQVYKTACETAILLLRIDDIVSGTKKMDAAMS 287
>30661
Length = 380
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = +3
Query: 329 GGIALNSFDDLNPDCLGHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIK 388
GG ++FD LG L+ E +GE+K + T++++G + L +
Sbjct: 30 GGEITSTFDCPEKTKLGQCDLIEEVMIGEDKLIKFSGVALGEACTIVLRGATQQILDEAX 209
Query: 389 DAIRDGLRAVKNAIDD 404
++ D L + + +
Sbjct: 210 RSLHDALCVLSQTVKE 257
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|8392847|ref|NP_058556.1| ARP1 actin-related protein 1
homolog A, centractin alpha [Mus musculus]
(376 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04742 436 e-123
12322 372 e-103
39562 355 2e-98
02757 141 2e-63
00608 181 6e-46
32273 180 1e-45
01436 131 4e-31
19721 92 4e-30
36954 117 5e-27
18926 94 1e-19
11487 66 4e-19
13361 87 1e-17
26639 31 0.66
00310 28 4.3
04121 28 4.7
14855 28 6.8
>04742
Length = 2111
Score = 436 bits (1120), Expect = e-123, Method: Compositional matrix adjust.
Identities = 198/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
Frame = +2
Query: 12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71
+VIDNGSG+ KAGFAGD P+ FP+ VGRP+H VM G + D ++G +A+ RG+L++
Sbjct: 116 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 295
Query: 72 RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131
+YP+EHGIV +W+DME+IW + + ++L+ EEHPVLLTEAPLNP+ NRE+ ++ FET
Sbjct: 296 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 472
Query: 132 FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 191
FN PA+++++QAVLSLYA+GRTTG+VLDSGDGV H VPIYEG+A+PH+I R+D+AGRD++
Sbjct: 473 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYEGYALPHAISRLDLAGRDLT 652
Query: 192 RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSIN-PQKDETLETEKA---QYYLPDGS 247
+L L + GY F +++E EIV+ IKE+ CY++++ Q+ +T + + Y LPDG
Sbjct: 653 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQ 832
Query: 248 TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 307
I IG RFR PE +F+P +G ES G HE +I K D+D+R+ L++N VLSGGST++
Sbjct: 833 VITIGNERFRCPEAMFQPSFLGMESAGXHETTYNSIMKCDVDIRKDLYANTVLSGGSTMY 1012
Query: 308 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367
G DR+ E+ LAP +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 1013PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1192
Query: 368 ARSIHRKTF 376
+HRK F
Sbjct: 1193PSIVHRKCF 1219
>12322
Length = 849
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 170/213 (79%), Positives = 199/213 (93%)
Frame = +1
Query: 164 VTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACY 223
VTHAVP+YEGFAMPHSIMR+D+AGRDV+R+LRL LRKEG D H+++EFE+VK IKER CY
Sbjct: 1 VTHAVPVYEGFAMPHSIMRVDVAGRDVTRYLRLLLRKEGMDLHTTAEFEVVKHIKERTCY 180
Query: 224 LSINPQKDETLETEKAQYYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAI 283
LSINP K+E+++TEK Y LPDG+T+E+GP+RFRAPELLFRPDLIGEE EGIHEVL ++I
Sbjct: 181 LSINPLKEESVDTEKVSYTLPDGNTVEVGPARFRAPELLFRPDLIGEECEGIHEVLSYSI 360
Query: 284 QKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIG 343
QKSD+DLR+TL+SNIVLSGGSTLFKGFGDRLLSE+KKLAPKD+KIRISAPQERLYSTWIG
Sbjct: 361 QKSDVDLRKTLYSNIVLSGGSTLFKGFGDRLLSELKKLAPKDIKIRISAPQERLYSTWIG 540
Query: 344 GSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376
SILASLDTF+KMWVSK+EY E+G ++IHRKTF
Sbjct: 541 XSILASLDTFRKMWVSKREYHEEGVKAIHRKTF 639
>39562
Length = 1438
Score = 355 bits (911), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 162/302 (53%), Positives = 226/302 (74%), Gaps = 4/302 (1%)
Frame = -2
Query: 79 IVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALF 138
IV +W+DME+IW + + ++L+ EEHPVLLTEAPLNP+ NRE+ ++ FETFN PA++
Sbjct: 1437 IVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 1261
Query: 139 ISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYL 198
+++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++ +L L
Sbjct: 1260 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 1081
Query: 199 RKEGYDFHSSSEFEIVKAIKERACYLSINPQKD----ETLETEKAQYYLPDGSTIEIGPS 254
+ GY F +++E EIV+ IKE+ Y++++ +++ + + + Y LPDG I IG
Sbjct: 1080 TERGYSFTTTAEREIVRDIKEKLDYVALDFEQEMLTAASSSSLEKSYELPDGQVITIGNE 901
Query: 255 RFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRL 314
RFR PE +F+P +G ES GIHE +I K D+D+R+ L++N VLSGGST++ G DR+
Sbjct: 900 RFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRM 721
Query: 315 LSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRK 374
E+ LAP +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G +HRK
Sbjct: 720 QKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 541
Query: 375 TF 376
F
Sbjct: 540 CF 535
>02757
Length = 1094
Score = 141 bits (355), Expect(3) = 2e-63, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
Frame = -2
Query: 177 PHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLET 236
P +I+R+D+AGRD++ +L L + GY F +++E EIV IKE+ CY++++ +++
Sbjct: 997 PTAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVXDIKEKLCYVALDFEQEMATAA 818
Query: 237 EKAQ----YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRR 292
+ Y LPDG I IG RFR PE LF+P +G ES GIHE +I K D+D+R+
Sbjct: 817 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRK 638
Query: 293 TLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPK 324
L++N VLSGG+T+F G DR+ E+ LAP+
Sbjct: 637 DLYANTVLSGGTTMFPGIADRMQKEITALAPQ 542
Score = 73.6 bits (179), Expect(3) = 2e-63, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = -3
Query: 326 VKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376
+KI+ AP ER YS WIGGSILASL TF++MW+SK+EY+E G +HRK F
Sbjct: 537 MKIKXIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 385
Score = 67.0 bits (162), Expect(3) = 2e-63, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -1
Query: 145 LSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPH 178
LSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH
Sbjct: 1094 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPH 993
>00608
Length = 1930
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 182/324 (56%), Gaps = 35/324 (10%)
Frame = +3
Query: 79 IVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALF 138
I+ DW+ MER ++ V K L+ E+H LLTE PLN +NRE AE+ FE+FNVP L+
Sbjct: 3 IIDDWDLMERFYEQVIFK-YLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLY 179
Query: 139 ISMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDV 190
I++QAVL+L A+ + TG V+DSGDGVTH +P+ EG+ + I I IAGRD+
Sbjct: 180 IAVQAVLALAASWTSRNVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 359
Query: 191 SRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKD----ETLETEKAQYYLPDG 246
+ F++ LR+ E KAIKER Y+ + K+ +T ++ + Y
Sbjct: 360 TYFIQQLLREREVGIPPEQSLETAKAIKERFSYVCPDIAKEFSKYDTDPSKWMKKYEGRN 539
Query: 247 S------TIEIGPSRFRAPELLFRPDLIGEE-SEGIHEVLVFAIQKSDMDLRRTLFSNIV 299
+ ++++G RF PE+ F P+ + + I +V+ IQ +D+RR L+ NIV
Sbjct: 540 TISKQLFSVDVGYERFLGPEIFFHPEFSNPDFTMPISDVVDDVIQNCPIDVRRGLYKNIV 719
Query: 300 LSGGSTLFKGFGDRLLSEVK----------------KLAPKDVKIRISAPQERLYSTWIG 343
LSGGST+F+ FG ++ +VK ++ PK +++++ + Y+ W G
Sbjct: 720 LSGGSTMFRDFGRKIQRDVKRVVDGRLKASEELSQGRIKPKPIEVQVITHHMQRYAVWFG 899
Query: 344 GSILASLDTFKKMWVSKKEYEEDG 367
GS+LAS F ++ +K +Y+E G
Sbjct: 900 GSMLASTPEFYQVCHTKADYDEHG 971
>32273
Length = 265
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 81/88 (92%), Positives = 87/88 (98%)
Frame = -2
Query: 68 LLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEV 127
L+SIRYPMEHGIVKDWNDMERIWQY+YSKDQLQTFSEEHPVLLTEAPLNPR+NRE+AAE+
Sbjct: 264 LMSIRYPMEHGIVKDWNDMERIWQYIYSKDQLQTFSEEHPVLLTEAPLNPRRNREKAAEI 85
Query: 128 FFETFNVPALFISMQAVLSLYATGRTTG 155
FF+TFNVPALFISMQAVLSLYATGR TG
Sbjct: 84 FFDTFNVPALFISMQAVLSLYATGRITG 1
>01436
Length = 2563
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 114/200 (57%), Gaps = 16/200 (8%)
Frame = +3
Query: 190 VSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPD 245
++R+L L GY F+ S++FE V+ +KE+ CY + + ++++ L E Y LPD
Sbjct: 3 ITRYLIKLLLLRGYAFNHSADFETVRMLKEKLCYTAYDVEQEQKLALETTVLVEPYILPD 182
Query: 246 GSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGST 305
G I++G RF APE LF+P LI + G+ E+L IQ +DMD+R + +IVLSGGST
Sbjct: 183 GRVIKVGGERFEAPEALFQPHLINVDGVGVAELLFNTIQAADMDIRPDFYKHIVLSGGST 362
Query: 306 LFKGFGDRLLSEVKKLAPKDV-----------KIRISAPQERLYSTWIGGSILASLDTFK 354
++ G RL E+K+L + V KIRI P R + ++GGS+ A + K
Sbjct: 363 MYPGLPSRLEREIKQLYLERVLXGDTSRLSKFKIRIEDPPRRKHMVFLGGSVXADIMKDK 542
Query: 355 -KMWVSKKEYEEDGARSIHR 373
W+ + EYEE G + + +
Sbjct: 543 DDFWMMRSEYEEMGVKVLDK 602
>19721
Length = 757
Score = 91.7 bits (226), Expect(2) = 4e-30, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 79/121 (65%), Gaps = 8/121 (6%)
Frame = +2
Query: 79 IVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALF 138
+V+DW+ ER + K L+ E+H LLTE PLN +NRE AE+ FETFN+P L+
Sbjct: 2 VVEDWDLHERFMEQAIFK-YLRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNIPGLY 178
Query: 139 ISMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDV 190
I++QAVL+L A+ + TG V+DSGDGVTH +P+ +G+ + +I I IAGRD+
Sbjct: 179 IAVQAVLALAASWTSRPPNERTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDI 358
Query: 191 S 191
+
Sbjct: 359 T 361
Score = 57.8 bits (138), Expect(2) = 4e-30, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Frame = +3
Query: 212 EIVKAIKERACYLS-----------INPQKDETLETEKAQYYLPDGSTIEIGPSRFRAPE 260
E K IKER Y+ +P+K PD S ++G +F PE
Sbjct: 420 EAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKAHKMSGSSKYPDFS-FDVGYEKFLGPE 596
Query: 261 LLFRPDLI-GEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFK 308
+ FRP+ + G+ I +V+ IQ +D RR L++NIVLSGGS++FK
Sbjct: 597 VFFRPEFVNGDFQASISDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMFK 743
>36954
Length = 892
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 111/203 (54%), Gaps = 13/203 (6%)
Frame = -1
Query: 12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71
+V D GS +AG+AG+ PK P +VG + + GD P E + L+
Sbjct: 802 LVFDIGSYSFRAGYAGEDTPKAEIPTHVGVMEDIETTMDTDGGD---APPQPEKKYLIDT 632
Query: 72 RYPMEH-------------GIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPR 118
Y M+H G+V+DW+ E++ Y Y++ +++ S HP+L++E N +
Sbjct: 631 VY-MKHPRKGMHLNSFLKDGMVEDWDMFEKVIDYAYNR-SIKSESCLHPLLMSEPAWNTK 458
Query: 119 KNRERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPH 178
RE+ E+ FE +N+PA F+ +VLS +A GR+T ++LDSG T AVP+Y+G+ +
Sbjct: 457 AKREKLTEIMFEKYNIPAFFLRKNSVLSAFANGRSTALILDSGATHTSAVPVYDGYVLTQ 278
Query: 179 SIMRIDIAGRDVSRFLRLYLRKE 201
I++ +AG ++R L + ++
Sbjct: 277 GIVKSPLAGDFIARECGLLMEEQ 209
>18926
Length = 478
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Frame = +1
Query: 274 GIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRI--- 330
G+ V+ ++ D+D+R +L+ ++ GG++L +GF +RL ++ P ++++I
Sbjct: 97 GVGHVVTTSVGMCDIDIRPSLYGGVIAVGGNSLIQGFTERLNRDLSNKTPPSMRLKIIAA 276
Query: 331 SAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKT 375
++ ER +S+WIGGSILASL +F++MWVSK+EYEE G + RK
Sbjct: 277 ASTAERRFSSWIGGSILASLGSFQQMWVSKQEYEEGGKSCVERKC 411
>11487
Length = 771
Score = 66.2 bits (160), Expect(2) = 4e-19, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = -2
Query: 335 ERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376
ER YS WIGGSILASL TF++MW+SK+EY+E G +HRK F
Sbjct: 599 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 474
Score = 45.8 bits (107), Expect(2) = 4e-19, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = -1
Query: 282 AIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSE 317
+I K D+D+R+ L++N VLSGG+T+F G DR+ E
Sbjct: 756 SIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKE 649
>13361
Length = 1217
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 17/137 (12%)
Frame = +3
Query: 248 TIEIGPSRFRAPELLFRPDLIGEE-SEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTL 306
+++G RF PE+ F P+ + + + E++ IQ +D+RR L++NIVLSGGST+
Sbjct: 150 NVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRHLYNNIVLSGGSTM 329
Query: 307 FKGFGDRLLSEVK----------------KLAPKDVKIRISAPQERLYSTWIGGSILASL 350
FK FG RL ++K ++ PK + +++ + Y+ W GGS+LAS
Sbjct: 330 FKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLAST 509
Query: 351 DTFKKMWVSKKEYEEDG 367
F ++ +K YEE G
Sbjct: 510 PEFYQVCHTKAAYEEYG 560
>26639
Length = 435
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 44 HVRVMAGALEGDIFIGPKAEEHRGLLSIRYPMEHGIV 80
H +V+AGALEGD+ G +IR P++HG V
Sbjct: 71 HGKVLAGALEGDV----------GSTNIRXPVQHGHV 151
>00310
Length = 2568
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 250 EIGPSRFRAPELLFRPDLIGEES 272
++GP F PELL PDL G E+
Sbjct: 2208 QLGPGWFLVPELLV*PDLAGSEA 2276
>04121
Length = 1871
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 257 RAPELLF-RPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIV 299
R P L F R LI ++ + + ++FA+ S +D+ TLF IV
Sbjct: 1673 RKPVLYFSRSPLINTTTQCVSKSVIFAVPPSTLDMECTLFVMIV 1542
>14855
Length = 1907
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 197 YLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDE 232
+L + +FH S EFE +K I + CY S + Q +E
Sbjct: 994 FLHQAP*NFHVSKEFE*MKVINIKCCYESDSEQMEE 1101
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|19527174|ref|NP_598714.1| splicing factor 3b, subunit
3 [Mus musculus]
(1217 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08936 436 e-122
12525 46 1e-04
22154 43 7e-04
11182 32 1.6
22462 30 4.8
>08936
Length = 1098
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 194/258 (75%), Positives = 234/258 (90%)
Frame = +3
Query: 960 LIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNEN 1019
LIGVG+ LR+YDLGKKKLLRKCENKHI N+++ I T+GHRV+V D+Q+SF +VRY+R EN
Sbjct: 3 LIGVGRFLRIYDLGKKKLLRKCENKHIPNFVTTIHTLGHRVVVGDIQDSFHFVRYRRQEN 182
Query: 1020 QLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDR 1079
QLI+FADDT PRW+T ++LLD++TVAGADKFGNI V+RLPP +DEVDEDPTGNKALWDR
Sbjct: 183 QLIVFADDTTPRWITCSTLLDFNTVAGADKFGNINVIRLPPEVSDEVDEDPTGNKALWDR 362
Query: 1080 GLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHD 1139
G+L+GASQK E + ++H+GE V SLQK TLIPGGSE+LVYTTLSGGIG+LVPFTSH+DHD
Sbjct: 363 GVLSGASQKVETVASFHIGELVSSLQKATLIPGGSEALVYTTLSGGIGMLVPFTSHDDHD 542
Query: 1140 FFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDR 1199
FFQH+EM++RSE P +CGRDHL++RSYYFP+KNVIDGDLCE FNSM+ KQ++V+EEL+R
Sbjct: 543 FFQHLEMYMRSEFPSICGRDHLAYRSYYFPLKNVIDGDLCEMFNSMDNAKQRSVAEELER 722
Query: 1200 TPPEVSKKLEDIRTRYAF 1217
TP EVSKKLEDIRTRYAF
Sbjct: 723 TPSEVSKKLEDIRTRYAF 776
>12525
Length = 698
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 1196 ELDRTPPEVSKKLEDIRTRYAF 1217
EL+RTP EVSKKLEDIRTRYAF
Sbjct: 360 ELERTPSEVSKKLEDIRTRYAF 425
>22154
Length = 382
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = -2
Query: 975 KKLLRKCENKH--IANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRW 1032
K+L +C N + IA Y+ + G V+V D+ S + YK+ E QL A D P W
Sbjct: 381 KELRLECSNFNHIIALYV---KVKGDFVLVGDLMRSVSLLAYKQREGQLEEIARDCNPNW 211
Query: 1033 VTTASLLDYDTVAGADKFGNI 1053
+T+ +LD D GA+ N+
Sbjct: 210 MTSVEILDDDNFLGAENSFNL 148
>11182
Length = 1960
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 772 AVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQ 814
AVFNQV P + HP+ +++ I + H Y AT+A+
Sbjct: 1375 AVFNQVELPFTVNLNMYPTHPKGDSVAIAKKLHAKYKHATQAE 1247
>22462
Length = 1416
Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -3
Query: 975 KKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLII 1023
+K+L C+ KH +++ +Q +G + I + ++ +YK N LII
Sbjct: 1297 RKMLSDCQKKHFFHHLH-LQPLGPKYIHHKAKNVLVYTQYKTTWNVLII 1154
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|82930255|ref|XP_486227.3| PREDICTED: talin 2 isoform
1 [Mus musculus]
(2543 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09133 396 e-121
30501 77 7e-14
08616 65 5e-10
17332 49 2e-05
17228 40 0.015
30680 31 6.7
>09133
Length = 1844
Score = 396 bits (1018), Expect(2) = e-121, Method: Compositional matrix adjust.
Identities = 240/448 (53%), Positives = 292/448 (65%), Gaps = 11/448 (2%)
Frame = +1
Query: 2038 GAASTPDKXXXXXXXXXXXXXXXXEVVKLGAASLGSNDPETQVVLINAIKDVAKALSDLI 2097
GAAS ++ +VVK+GA SLG PE QV+LINA+KDVA ALSDLI
Sbjct: 100 GAASNQEQLAAAAQAAVKTITRLADVVKIGAGSLGPEQPEAQVLLINAVKDVASALSDLI 279
Query: 2098 GATKGAASKPADDPSMYQLKGAAKVMVTNVTSLLKTVKAVEDEATRGTRALEATIEYIKQ 2157
ATK A+ KP DP+M LK +AKVMVTNVTSLLKTVK+VEDEA RGTRALE+TIE I Q
Sbjct: 280 SATKNASGKPVSDPAMLHLKDSAKVMVTNVTSLLKTVKSVEDEAVRGTRALESTIEAIGQ 459
Query: 2158 EL------TVF---QSKDIPEKTSSPEESIRMTKGITMATAKAVAAGNSCRQEDVIATAN 2208
E+ T F Q + I + SP ++ + + +AT + V +S
Sbjct: 460 EVKALTPRTTFLARQRQKI*SDSPSP*-PWQLPRLLPLAT-RVVRKISSL-------PPT 612
Query: 2209 LSRKAVSDMLIACKQASFYPDVSEEVRTRALRYGTECTLGYLDLLEHVLVILQKPTPELK 2268
L RK + ++ K + + E++ RAL G + Y +LLE+V ++ +PT E +
Sbjct: 613 LGRKCIFELFGVIK-GAAATAETAEIKKRALNAGRSAAMTYKELLENVHQVVLRPTQEGR 789
Query: 2269 HQLAAFSKRVAGAVTELIQAAEAMKGTEWVDPEDPTVIAETXXXXXXXXXXXXXXXXXQL 2328
LA S++VA AVTEL+Q+AE +KGT+WVDP+DPTVIAE QL
Sbjct: 790 QNLALVSRKVANAVTELVQSAEVIKGTDWVDPDDPTVIAENELLSAASSIEAAAKKLSQL 969
Query: 2329 KPRAKPKQADETLDFEEQILEXXXXXXXXXXXLVKSASAAQRELVAQGKVGSIPANAA-- 2386
KPR K+ADE+L+F+EQILE LVKSASAAQRELVAQGKV S A
Sbjct: 970 KPRQAAKKADESLNFDEQILEAAKSIAAATAALVKSASAAQRELVAQGKVSSTFTRHAVD 1149
Query: 2387 DDGQWSQGLISAARMVAAATSSLCEAANASVQGHASEEKLISSAKQVAASTAQLLVACKV 2446
+DGQWSQGLISAARMVAAAT SLCEAANA VQGHASEEKLI+SAK+VA STAQLL+ACKV
Sbjct: 1150 EDGQWSQGLISAARMVAAATHSLCEAANAMVQGHASEEKLIASAKEVAGSTAQLLMACKV 1329
Query: 2447 KADQDSEAMKRLQAAGNAVKRASDNLVR 2474
KAD S AM+RLQAAGNAVKRAS+ LVR
Sbjct: 1330 KADPGSVAMQRLQAAGNAVKRASEALVR 1413
Score = 58.9 bits (141), Expect(2) = e-121, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = +2
Query: 2005 TLNAENGETFADHRENILKTAKALVEDTKLLVSGAAST 2042
TLN E ETFAD RENILKTAKALVEDTK LV+G T
Sbjct: 2 TLNPEGDETFADQRENILKTAKALVEDTKTLVAGPPPT 115
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 1481 QNLVDPGSSPSQ-VLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTA 1539
++ VD SQ ++SAA +VA T +LC A A++ ++ + SAKEVA STA
Sbjct: 1135 RHAVDEDGQWSQGLISAARMVAAATHSLCEA---ANAMVQGHASEEKLIASAKEVAGSTA 1305
Query: 1540 NLVKTIK 1546
L+ K
Sbjct: 1306 QLLMACK 1326
>30501
Length = 638
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Frame = -1
Query: 2332 AKPKQADETLDFE--EQILEXXXXXXXXXXXLVKSASAAQRELVAQGKVGSIPANA--AD 2387
+K ++ D + E E+ILE L+ + A Q+E+V+ K G+ AN
Sbjct: 503 SKSRENDNKIKLEVNEKILEACTSLMECIKILILKSRALQKEIVSSQK-GNASANEFYKR 327
Query: 2388 DGQWSQGLISAARMVAAATSSLCEAANASVQGHASEE-KLISSAKQVAASTAQLLVACKV 2446
+ QWS GLISA++ VA A + L EAAN +V + + +LI +A+++AA T QL++A KV
Sbjct: 326 NSQWSDGLISASKSVAKAANYLVEAANNAVNSDSXQNFELIVAAQEIAACTVQLVIASKV 147
Query: 2447 KADQDSEAMKRLQAAGNAVKRAS 2469
KA+++SE + L AA V +A+
Sbjct: 146 KANRNSENLTNLTAASRNVTKAT 78
>08616
Length = 2833
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Frame = +2
Query: 273 IKQRGAEKRIFQEHKNCGEMSEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRL 332
IK + +RI + H N EMS +EAK+ Y+K +SL +G+++F ++K N L
Sbjct: 1025 IKSKAIVQRIMEAHANVREMSLMEAKMAYIKAWQSLPEFGITYF----RIKMANSKKEEL 1192
Query: 333 LGITKDSVMRVDEKTKEVLQEWPLTTVKRWAASP--KSFTLDFGEYQESYYSVQTTEGEQ 390
LG+ + V+R+D T + ++ W ++ W + +S LDF E Q+ +S +
Sbjct: 1193 LGVASNRVIRMDLNTGDSIKTWRYNLLQTWHVNWENESVILDF-EDQKVTFSPLECSCKT 1369
Query: 391 ISQLIAGYIDIILK 404
+ I GYI + ++
Sbjct: 1370 AHEFIGGYIFLSMR 1411
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = +2
Query: 175 WLDHSRTFREQGVDENETLLLRRKFF-YSDQNVDSRDPVQLNLLYVQARDDILNGSHPVS 233
WLD SR+ EQGV EN+ ++L+ KF+ + D N DP+++N +Y QA+ +++ +
Sbjct: 188 WLDSSRSLMEQGVQENDFIMLKFKFYNFYDLN-PKYDPIRINQIYEQAKWALISEEIDCT 364
Query: 234 FEKACEFGG--FQAQIQFG 250
E+ F FQ+Q+Q G
Sbjct: 365 EEEMMVFAALQFQSQLQSG 421
>17332
Length = 473
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 174 NWLDHSRTFREQ--GVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHP 231
+WLD +++ Q G L KF+ +D R+ + L ++Q + DIL G P
Sbjct: 137 HWLDGNKSLSSQLKGCQTPHKLYFGVKFYAADP-CKLREEITRYLFFLQVKQDILQGRLP 313
Query: 232 VSFEKACEFGGFQAQIQFGPHVEHKHKPGFLDLKEFLPKEYIKQRGAEKRIFQEHK 287
V+F++A E + Q + G +H G++ F+P + E+R+ H+
Sbjct: 314 VTFDEASELCAYAVQSELGDFDPRQHTDGYVSEFCFIPNQ---TEELERRVAGLHR 472
>17228
Length = 487
Score = 39.7 bits (91), Expect = 0.015, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Frame = +3
Query: 218 YVQARDDILNGSHPVSFEKACEFGGFQAQIQFGPHVEHKHKPGFLDLK-EFLPKEYIKQ- 275
+ Q + L G H V+ E+A + +++F H K F D+ LP+ + +
Sbjct: 132 FPQEVPNFLRGYHKVTGEEAVKMAALLYRVRFSQDATHFTK--FSDIAPAILPRGFPETG 305
Query: 276 --RGAEKRIFQEHKNCGEMSEIEAKVKYVKLARSLRTYGVSFFLVKEKM 322
+K + E+KN S + +++++A S TYG FF VK++M
Sbjct: 306 LLDDVKKAVEAEYKNSTGSSPDSVRERFLQMAVSWPTYGCVFFEVKQRM 452
>30680
Length = 715
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = -1
Query: 1145 NDPEAAHAMLDSARDVMEGSAMLIQEAKQALIAPGDTESQQRLAQVAK 1192
+ P+AAH++L +AR++ E QEA A+ P D +Q+R+ + +
Sbjct: 151 DPPQAAHSLLVAAREI-ESYVPCTQEADDAIETPEDAVTQERVPETKR 11
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|124286826|ref|NP_659115.3| eukaryotic translation
termination factor 1 [Mus musculus]
(437 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01549 415 e-120
33693 175 7e-48
17669 99 4e-21
32244 29 4.0
25312 29 4.0
00673 29 4.3
08223 28 5.6
01195 28 7.8
18020 28 9.2
>01549
Length = 2495
Score = 415 bits (1067), Expect(2) = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 226/247 (91%), Gaps = 1/247 (0%)
Frame = +3
Query: 178 KKHGRGGQSALRFARLRME-KRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTEL 236
KKHGRGGQSALRFARLRME +NYVRKVAE AVQLFI+ DK N++GLVLAGSADFKTEL
Sbjct: 39 KKHGRGGQSALRFARLRME*TYYNYVRKVAEVAVQLFITNDKPNISGLVLAGSADFKTEL 218
Query: 237 SQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQ 296
SQSDMFD RLQ K++K+VD+SYGGENGFNQAIEL++E L+NVKFIQEKKLIGRYFDEISQ
Sbjct: 219 SQSDMFDPRLQGKIIKIVDVSYGGENGFNQAIELASESLANVKFIQEKKLIGRYFDEISQ 398
Query: 297 DTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSH 356
DTGKYCFGV+DTL+ALEMGAV+ LIV+EN+DI R+VL T+EE+IL+L PEQEKDK+H
Sbjct: 399 DTGKYCFGVDDTLRALEMGAVDTLIVWENMDIQRFVLKNHTTDEERILHLGPEQEKDKTH 578
Query: 357 FTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYR 416
FTDK+TG E EL+E MPLLEWFANNYK FGATLEI+TD+SQEG+QFVKGFGGIGGILRY+
Sbjct: 579 FTDKDTGVEMELMEQMPLLEWFANNYKNFGATLEIITDRSQEGAQFVKGFGGIGGILRYQ 758
Query: 417 VDFQGME 423
VDFQ ME
Sbjct: 759 VDFQMME 779
Score = 34.3 bits (77), Expect(2) = e-120, Method: Compositional matrix adjust.
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 165 TREVLHKFTVDLPK 178
TREVLHKFTVDLPK
Sbjct: 1 TREVLHKFTVDLPK 42
>33693
Length = 627
Score = 175 bits (443), Expect(2) = 7e-48, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = -3
Query: 18 KKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITS 77
+KLIKSLEAARGNGTSMISLIIPPKDQI+RV KMLADEFGTASNIKSRVNRLSVLGAITS
Sbjct: 268 QKLIKSLEAARGNGTSMISLIIPPKDQIARVNKMLADEFGTASNIKSRVNRLSVLGAITS 89
Query: 78 VQQRLKLYNKVPPNGLVVYCGTIVTEEGK 106
VQQRLKLYNKVPPNGLV+YCGTI+TEEGK
Sbjct: 88 VQQRLKLYNKVPPNGLVIYCGTIITEEGK 2
Score = 33.9 bits (76), Expect(2) = 7e-48, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -1
Query: 3 DDPSAADRNVEIWKIKKLIKSLE 25
D S+ADRNVEIWKIK L ++L+
Sbjct: 312 DGESSADRNVEIWKIKNLSRALK 244
>17669
Length = 467
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%)
Frame = +1
Query: 367 ELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQG 426
ELIES PLLEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIGGILRY++ + Y
Sbjct: 1 ELIESQPLLEWLANNYKIFGATLEIITDKSQEGSQFVRGFGGIGGILRYKIS---LTYTA 171
Query: 427 GDDEFFDLDDY 437
++ + + D+
Sbjct: 172 DEEGYHPVGDH 204
>32244
Length = 751
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -1
Query: 270 LSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYEN-LDI 328
L+ + ++ QE+K R+ + Q Y + L + E+ ++Y++ ++I
Sbjct: 505 LNMRYMKQCQYHQERK---RFISRLCQYHALY--------EXLSITPGEVNVLYQDFVNI 359
Query: 329 MRYVLHCQGTEEEK 342
MRY+ HCQ +E K
Sbjct: 358 MRYMKHCQ*RQERK 317
>25312
Length = 655
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 297 DTGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
+GKY G + TLK L G +++I+ N +R
Sbjct: 255 KSGKYFLGYKQTLKTLRQGKAKLVIIANNTPPLR 356
>00673
Length = 3471
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 62 IKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVT 102
+K N S L AIT + LYNK PP C ++VT
Sbjct: 5 VKKTDNIYSTLHAITCYHRIFSLYNKTPPP-----CSSLVT 112
>08223
Length = 507
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 297 DTGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
+GKY G + TLK L G +++I+ N +R
Sbjct: 160 KSGKYFLGYKQTLKTLRQGKAKLVIIANNTPPLR 261
>01195
Length = 2128
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 294 ISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
+ +GKY G + TLK L G +++I+ N +R
Sbjct: 753 LVMKSGKYFLGYKQTLKTLRQGKAKLVIIANNTPPLR 643
>18020
Length = 497
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 331 YVLHCQGTEEEKILYL 346
Y LHC TE EK+LYL
Sbjct: 481 YSLHCIATEREKLLYL 434
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|17975508|ref|NP_083079.1| glucan (1,4-alpha-),
branching enzyme 1 [Mus musculus]
(702 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
26122 221 e-120
24316 30 2.9
>26122
Length = 907
Score = 221 bits (563), Expect(3) = e-120, Method: Compositional matrix adjust.
Identities = 106/154 (68%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Frame = +1
Query: 381 FGLQVDEDALIYLMLANHLAHTLYPD-SITIAEDVSGMPALCSPTSQGGGGFDYRLAMAI 439
FGL D +A YL LAN++ H LYPD +T++EDVSGMP L P +GG GFDYRLAM +
Sbjct: 445 FGLNTDTEAFNYLTLANYMLHGLYPDFMVTVSEDVSGMPTLGRPVEEGGCGFDYRLAMGL 624
Query: 440 PDKWIQLLKEFKDEDWNMGNIVYTLTNRRYLEKCVAYAESHDQALVGDKTLAFWLMDAEM 499
PD WI+LLK+ DEDWN+ NIV+TLTNRR+ E C+AY ESHDQALVGDKT+AFWLMD EM
Sbjct: 625 PDMWIKLLKKTADEDWNIDNIVHTLTNRRWSEPCIAYTESHDQALVGDKTIAFWLMDKEM 804
Query: 500 YTNMSVLAPFTPVIDRGIQLHKMIRLITHGLGGE 533
YT+MSV+AP + VIDRG+ LHKMIRLIT GLGGE
Sbjct: 805 YTHMSVMAPPSLVIDRGMALHKMIRLITIGLGGE 906
Score = 174 bits (441), Expect(3) = e-120, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 88/99 (88%)
Frame = +3
Query: 241 MEHAYYASFGYQITSFFAASSRYGTPEELKELVDTAHSMGIVVLLDVVHSHASKNSEDGL 300
MEHAYYA FGYQ+TSFFAASSRYG+PE+LKELVDTAH+ G+ VLLDVVHSHASKN DGL
Sbjct: 27 MEHAYYACFGYQVTSFFAASSRYGSPEDLKELVDTAHAHGVTVLLDVVHSHASKNVVDGL 206
Query: 301 NMFDGTDSCYFHSGPRGTHDLWDSRLFIYSSWEVLRFLL 339
N FDGT+SCYFH G RGTHDLWDSRLF Y+SWEVLRF
Sbjct: 207 NQFDGTNSCYFHDGGRGTHDLWDSRLFNYTSWEVLRFCC 323
Score = 75.9 bits (185), Expect(3) = e-120, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 337 FLLSNIRWWLEEYCFDGFRFDGVTSMLYHHHGMGQGFSGDYNEY 380
FLLSN+R W++EY FDGFRFDGVTSM+YH HGMG GF+G Y+EY
Sbjct: 314 FLLSNLRMWVDEYGFDGFRFDGVTSMVYHTHGMGHGFTGHYDEY 445
>24316
Length = 1038
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 207 SSHEGKIASYKHFTSNVLPRIKDLGYNCIQLMAIM 241
++HE +I ++KH SNVL + ++ NC +++ +
Sbjct: 411 NTHENRIINHKH*VSNVLRLLSNVSTNCQRILIFL 515
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|25141235|ref|NP_036138.1| DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, Y-linked [Mus musculus]
(658 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01517 427 e-120
00621 280 1e-75
17544 243 2e-64
09327 211 5e-55
04883 211 1e-54
01062 196 2e-50
09316 167 2e-41
33025 162 4e-40
02054 91 6e-32
00739 130 2e-30
00162 116 5e-30
02498 80 5e-29
07310 121 1e-27
22006 102 6e-22
14337 100 2e-21
19525 96 5e-20
30136 93 3e-19
19640 89 3e-18
34295 84 2e-16
12995 80 2e-15
19172 80 3e-15
00617 75 1e-13
11160 65 2e-12
17708 71 2e-12
39583 70 3e-12
11624 70 3e-12
19151 63 5e-10
12121 62 8e-10
31220 56 5e-08
10649 54 2e-07
03381 54 3e-07
08036 53 5e-07
31899 52 1e-06
11423 44 1e-04
33083 44 2e-04
06438 44 2e-04
34134 41 0.001
01821 36 0.061
01797 35 0.070
33543 33 0.47
>01517
Length = 2605
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/252 (82%), Positives = 227/252 (90%), Gaps = 2/252 (0%)
Frame = +2
Query: 327 VDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPK 386
VDMMERGKIG+D C YLVLDEADRMLDMGFEPQIRRIVE+DTMPP G R T+MFSATFPK
Sbjct: 2 VDMMERGKIGMDHCNYLVLDEADRMLDMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPK 181
Query: 387 EIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNA--TGKDSLTL 444
EIQ+LARDFLD YIFLAVGRVGSTSENITQKVVWVEE +KRSFLLDLL A TG +SLTL
Sbjct: 182 EIQLLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEPEKRSFLLDLLMASGTGPESLTL 361
Query: 445 VFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGL 504
VFVETKKGADSLE FL E Y TSIHGDRSQ++RE+AL F++G +PILVATAVAARGL
Sbjct: 362 VFVETKKGADSLEQFLMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVAARGL 541
Query: 505 DISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQ 564
DI NV+HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN++N NI +D+LDLL EA Q
Sbjct: 542 DIPNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNIARDMLDLLTEANQ 721
Query: 565 EVPSWLESMAYE 576
EVPSWLES+AY+
Sbjct: 722 EVPSWLESLAYD 757
>00621
Length = 2263
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 227/385 (58%), Gaps = 21/385 (5%)
Frame = +1
Query: 199 YTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGR 258
Y PTP+Q AIPI + RD++ A+TGSGKTAAFL+P+L I +++ + R
Sbjct: 313 YKEPTPIQMQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI---------QSLPKIER 465
Query: 259 YGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHL 318
Q P +++LAPTRELA QI EE RKF +R V GG +Q L++GC +
Sbjct: 466 LEDADQGPYAVILAPTRELAQQIEEETRKFGEGLGIRVVSVIGGISREEQGFKLQQGCEV 645
Query: 319 LVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVE------------- 365
++ATPGR++D++E + L+ C Y+V+DEADRM++MGFEP++R+I++
Sbjct: 646 VIATPGRMIDVLENRYLVLNQCTYVVMDEADRMINMGFEPEVRKILDYLPVSNQKPDNDD 825
Query: 366 --------QDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQK 417
Q+ R T+MF+AT P +++ LAR FL + +G VG E + Q
Sbjct: 826 AEDDLKMLQNFKSKHKYRQTVMFTATMPPQVERLARTFLRRPTVVYIGNVGKPVERVEQI 1005
Query: 418 VVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQK 477
V + E +KR L+++LNA G D ++FV KKGAD L L + + T++HG + Q+
Sbjct: 1006VYMLTESEKRKKLIEVLNA-GVDPPIIIFVNQKKGADVLAKSLEKMGFNATTLHGGKGQE 1182
Query: 478 DREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 537
RE AL + G K I+VAT VA RG+DI +V V+N+D+ IE+Y HRIGRTGR G
Sbjct: 1183QREYALASLKGGAKDIMVATDVAGRGIDIKDVSLVLNYDMARTIEDYTHRIGRTGRAGKE 1362
Query: 538 GLATSFFNERNLNITKDLLDLLVEA 562
G + +F + + + DL L++ +
Sbjct: 1363GTSITFLTKEDSMVFYDLKQLMLSS 1437
>17544
Length = 1047
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 144/181 (79%), Gaps = 1/181 (0%)
Frame = +2
Query: 138 PLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDXXXXXXXXXXXXLT 197
PLP + RLEQELF G NTGINF+KY+DIPVEATG++ PPHI +F + L+
Sbjct: 509 PLPQNSRLEQELFGGNNTGINFDKYEDIPVEATGDSPPPHINSFEECTLGEIIRNNIVLS 688
Query: 198 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENG 257
+Y +PTPVQK A+PI+ KRDLMACAQTGSGKTAAFLLPIL+Q+Y +GP +A+++N
Sbjct: 689 KYNKPTPVQKFALPIVLGKRDLMACAQTGSGKTAAFLLPILNQVYENGP--TPEALQQNQ 862
Query: 258 RYG-RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGC 316
G RRK YPI+L+LAPTRELA QIY+EARKF+YRSR+RPCVVYGGAD Q+RDL++GC
Sbjct: 863 SRGYRRKMYPIALILAPTRELASQIYDEARKFAYRSRLRPCVVYGGADIGAQMRDLDKGC 1042
Query: 317 H 317
H
Sbjct: 1043H 1045
>09327
Length = 1087
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 3/238 (1%)
Frame = +2
Query: 270 VLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDM 329
+L PTRELA Q+ E A +F + SRVR VYGGA Q+R+L+RG + +ATPGRL+D
Sbjct: 20 LLVPTRELAQQVQEVAVEFGHSSRVRSVCVYGGAQRGPQLRELDRGAEICIATPGRLIDF 199
Query: 330 MERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 389
+E + L C YLVLDEADRMLDMGFEPQIR+IVEQ + P R T+M+SAT+PKE++
Sbjct: 200 LESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQ--IRPD--RQTLMWSATWPKEVR 367
Query: 390 MLARDFLDEYIFLAVGRVGSTS-ENITQKVVWVEELDKRSFLLDLLNAT--GKDSLTLVF 446
LA DF+ EY + +G + T+ NI Q + + +K L+ LLN K++ TL+F
Sbjct: 368 KLAEDFIMEYTQINIGALQLTANHNILQIIDVCMDHEKEEKLVKLLNEIMQEKENRTLIF 547
Query: 447 VETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGL 504
VETK+ D + + ++ + IHGD+SQ++R+ L+ FR+GR P+L+AT VA+RGL
Sbjct: 548 VETKRKCDDIHRRMKRDGWPVLCIHGDKSQQERDWVLNDFRNGRCPVLLATDVASRGL 721
>04883
Length = 1155
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 157/270 (58%), Gaps = 1/270 (0%)
Frame = +3
Query: 167 VEATGNNCPPHIENFSDXXXXXXXXXXXXLTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 226
+ +G P I F++ +T PTP+Q + P+ +DL+ AQTG
Sbjct: 324 ISVSGKFVPNPILTFTEVNFPDYVMNQVRRNSWTAPTPIQSQSWPVAMAGKDLVGIAQTG 503
Query: 227 SGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 286
SGKT AF+LP + I + Y R PI L L PTRELA Q+ E A+
Sbjct: 504 SGKTLAFMLPAIVHI-------------NHQAYLERGDGPIVLALVPTRELAQQVQEVAQ 644
Query: 287 KFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLD 346
+F + SRVR VYGGA Q+RDLERG + +ATPGRL+D +E + L C YLVLD
Sbjct: 645 EFGHASRVRSVCVYGGAPRGPQLRDLERGAEICIATPGRLIDFLESNRTNLRRCTYLVLD 824
Query: 347 EADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGR 406
EADRMLDMGFEPQIR+I+EQ + R T+M+SAT+PKE++ LA DF+DEY+ + +G
Sbjct: 825 EADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVRKLAEDFIDEYVQVNIGA 992
Query: 407 VGSTS-ENITQKVVWVEELDKRSFLLDLLN 435
+ T+ NI Q + E +K L+ LLN
Sbjct: 993 LELTANHNILQIIDVCMEHEKEDKLVKLLN 1082
>01062
Length = 2138
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 192/361 (53%), Gaps = 4/361 (1%)
Frame = -3
Query: 199 YTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGR 258
+ +P+ +Q+ A+ I + RD++A AQ+G+GKTA F + +L + ++E
Sbjct: 2019 FEKPSAIQQRAVKPIVKGRDVIAQAQSGTGKTATFSISVLQCLDIQ--------LRETQ- 1867
Query: 259 YGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHL 318
+L+L+PTRELA QI + V+ GG + + IR L+ G H+
Sbjct: 1866 ---------ALILSPTRELATQIQKVMLALGDYMNVQCHSCIGGTNIGEDIRKLDYGQHI 1714
Query: 319 LVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTM 378
+ TPGR+ DM++R + K ++LDEAD ML+ GF+ QI + +PP +
Sbjct: 1713 VSGTPGRVFDMIKRRNLRTRSIKMMILDEADEMLNKGFKEQIYDVYRY--LPPAT--QVI 1546
Query: 379 MFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVE----ELDKRSFLLDLL 434
+ SAT P EI + F+ + I + V R T E I Q V VE + D L D L
Sbjct: 1545 LISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 1366
Query: 435 NATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPIL 494
T ++F TK+ D L + + + +S+HGD QK+RE + FR+G +L
Sbjct: 1365 TITQ----AVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKEREAIMKVFRAGDSRVL 1198
Query: 495 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKD 554
+ T V ARG+D+ V VIN+DLP++ E Y+HRIGR+GR G G+A +F ++ I +D
Sbjct: 1197 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRD 1018
Query: 555 L 555
+
Sbjct: 1017 I 1015
>09316
Length = 2312
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 180/354 (50%), Gaps = 4/354 (1%)
Frame = +2
Query: 199 YTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIY-TDGPGEALKAMKENG 257
+ P+ VQ IP D++ A++G GKTA F+L L Q+ DG L
Sbjct: 905 FEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQLEPVDGQVSVL------- 1063
Query: 258 RYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADTVQQIRDLERGC 316
V+A TRELA QI +E +FS Y + V+ V +GG + L + C
Sbjct: 1064 ------------VMAHTRELAFQISKEYERFSKYMNNVKIAVFFGGMSVKKDEEVLSKNC 1207
Query: 317 -HLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVR 375
H++V TPGRL + + + L K+ +LDE D+ML + +RR V++ +
Sbjct: 1208 PHIVVGTPGRLHALAKANNLNLKKIKHFILDECDKMLA---DLDMRRDVQEIFRLTPHEK 1378
Query: 376 HTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGS-TSENITQKVVWVEELDKRSFLLDLL 434
MMFSAT KEI+ + + F+ + + + V T + Q +++ +K L +LL
Sbjct: 1379 QVMMFSATLSKEIRPICKKFMQDPMEVYVDDDSKLTLHGLQQHYCKLKDNEKNRKLFELL 1558
Query: 435 NATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPIL 494
+ + + ++FV++ +L L ++ + +IH +Q++R QF+ +K IL
Sbjct: 1559 DVLEFNQV-IIFVKSVPRCMALSQLLLEQNFPAIAIHRQMTQEERLSRYQQFKDFQKRIL 1735
Query: 495 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERN 548
VAT + RG+DI V V N+D+P D + Y+HR+ R GR G GLA +F ++ N
Sbjct: 1736 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 1897
>33025
Length = 558
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 107/158 (67%)
Frame = +3
Query: 281 IYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC 340
IY EA KFS + V P VVYG D Q + +G +L+V TPGRL+D + I L C
Sbjct: 3 IYGEAYKFSRGTDVHPSVVYGATDRRYQKSRIMKGANLVVGTPGRLLDFIGDQTISLGKC 182
Query: 341 KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI 400
+YL+LDEADRMLDMGFEP+IR++V+ MPPK R T+MFSATF ++IQ LA DFL++Y+
Sbjct: 183 QYLILDEADRMLDMGFEPEIRKLVDTHGMPPKTQRQTLMFSATFKEDIQRLAGDFLNDYL 362
Query: 401 FLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATG 438
F+ VG VG ++TQ + V+ L KR L ++LN G
Sbjct: 363 FITVGIVGGACSDVTQTFLEVDRLQKRDHLCEILNEMG 476
>02054
Length = 1110
Score = 91.3 bits (225), Expect(2) = 6e-32, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 96/178 (53%)
Frame = -3
Query: 391 LARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETK 450
L R L + + + V T + + Q +++ K ++L+ +LN +S +VF T
Sbjct: 784 LQRASLRDPVKVEVSNKYQTVDTLQQSYLFIPAKYKDAYLVSILNELAGNSF-MVFCSTC 608
Query: 451 KGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVK 510
+ L + +HG SQ R +L++F+S + IL+AT VA+RGLDI +V
Sbjct: 607 ANTQRVALLLRNLGFTAIPLHGQMSQAKRLGSLNKFKSKDRSILIATDVASRGLDIPHVD 428
Query: 511 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPS 568
V+N D+P+ ++Y+HR+GRT R G G A +F ++ ++ + + + L+ + E P+
Sbjct: 427 VVLNLDIPTHSKDYMHRVGRTARAGRSGRAITFVSQYDVELYQRIEHLIGKKLSEYPT 254
Score = 65.1 bits (157), Expect(2) = 6e-32, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = -2
Query: 282 YEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFC 340
+E+A FS VR +V G D Q L + H+++ATPGRLVD +E K L
Sbjct: 1085 WEKALAFS----VR*LLV--GIDMSTQALMLGKKPHIIIATPGRLVDHLENTKGFSLRAL 924
Query: 341 KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEI 388
K+LV+DEADR+LDM F+ ++ +I++ +P + R+T +FSAT ++
Sbjct: 923 KFLVMDEADRILDMNFQDEVDKILK--VIPRE--RNTYLFSATMTNKV 792
>00739
Length = 1313
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Frame = +3
Query: 304 DTVQQIRDLERGCHLLVATPGRLVDMMER-GKIGLDFCKYLVLDEADRMLDMGFEPQIRR 362
D ++Q +DL H++++TPGRL D ++ L K+LV+DEADR+LD F Q+
Sbjct: 6 DMMKQGQDLAVKPHIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDDNFGAQLEP 185
Query: 363 IVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVE 422
I+ + +P R T++FSAT + L L++ +T + + + V V
Sbjct: 186 ILTR--LP--SARQTLLFSATLSPTVNALRDSVLNKPFVWIQQSERATVDELQEDYVLVP 353
Query: 423 ELDKRSFLLDLLNATGKD---SLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDR 479
K ++++ +L+ KD S ++F T K A L L + +++C +H Q+ R
Sbjct: 354 ASMKDAYMVHILDHWLKDHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFR 533
Query: 480 EEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL 539
+L +F+S + IL++T VA+RGLDI V +IN ++P+ +YVHR+GRT R G G
Sbjct: 534 LSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDYVHRVGRTARAGRCGQ 713
Query: 540 ATSFFNERNLNITKDL 555
+ S E ++ + K +
Sbjct: 714 SISLVTEFDIKLIKSI 761
>00162
Length = 2322
Score = 116 bits (290), Expect(2) = 5e-30, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Frame = +3
Query: 268 SLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLV 327
+L++ PTRELA QIYE K +V GG ++ + + ++++ T GRL+
Sbjct: 144 ALIITPTRELAFQIYEVLNKIRTFHDFSANLVIGGKFMWRETHLMGKT-NIVICTVGRLL 320
Query: 328 DMMERGK-IGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPK 386
+E + + K LVLDEADR++D F + I+ +PP R T++FSAT
Sbjct: 321 HHLESTQAFDVSELKVLVLDEADRIMDSKFAQDMDSIMSH--LPP---RQTLLFSATQTM 485
Query: 387 EIQMLARDFLDEYIFLAVGRVGS--TSENITQKVVWVEELDKRSFLLDLLNATGKDSLTL 444
++ LAR L + +++V R T + Q + E +K S L L + + +
Sbjct: 486 SVKTLARLSLKDPSYVSVDRHAEYVTPTGLEQSYIVCELHEKLSLLYSFLKNHPNNKI-M 662
Query: 445 VFVETKKGADSLENFLFQER--YACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAAR 502
VF++T K A + + +ER + +HG Q R + +F + IL+ T +A R
Sbjct: 663 VFLQTCKQARYVHTVIKRERPGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACR 842
Query: 503 GLDISNVKHVINFDLPSDIEEYVHRIGRTGR 533
GLD V VI D P D+ Y+HR GRT R
Sbjct: 843 GLDFPAVNWVIQLDCPVDVNTYIHRAGRTAR 935
Score = 33.5 bits (75), Expect(2) = 5e-30, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 218 DLMACAQTGSGKTAAFLLPILSQI 241
D++ A+TGSGKT AFL+PIL +
Sbjct: 38 DVLGAAKTGSGKTLAFLIPILETL 109
>02498
Length = 1955
Score = 79.7 bits (195), Expect(2) = 5e-29, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 9/165 (5%)
Frame = +3
Query: 400 IFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSL--TLVFVETKKGADSLE 457
+ +++ R + +NI Q + +++ + L N G S+ +++F + A L
Sbjct: 738 VIISLKREEESLDNIKQYYIDCNSQEEK--YVALCNIYGSISVGQSMIFCHKRSTAAWLA 911
Query: 458 NFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDL 517
+ + +A + G+ + + R + +FR G++ +L+ T V+ARG+D+ V V+NFDL
Sbjct: 912 ERMTADHHAVGLLTGELTIEQRAAIIKRFREGKEKVLITTNVSARGIDVEMVTVVVNFDL 1091
Query: 518 P------SDIEEYVHRIGRTGRVGNLGLATSFF-NERNLNITKDL 555
P D E Y+HRIGRTGR G G+A + N R++ I + +
Sbjct: 1092PVTQDWRPDCETYLHRIGRTGRFGKNGIAINMVDNSRSMAIMRSI 1226
Score = 67.4 bits (163), Expect(2) = 5e-29, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Frame = +1
Query: 199 YTRPTPVQKHAIPII--KEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKEN 256
+ P+ +Q+ A+PI+ +++A +Q+G+GKTAAF+L +LS
Sbjct: 193 FNAPSKIQETALPILLADPPVNMIAQSQSGTGKTAAFVLTMLS----------------- 321
Query: 257 GRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-------YRSRVRPCVVYGGADTVQQI 309
R + +P L LAPT ELA+QI E K S R VR V G +QI
Sbjct: 322 -RVDISQTFPQCLCLAPTYELALQIGEVIEKMSKHMTGLEIRYAVRGERVNRGEVLSEQI 498
Query: 310 RDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDEADRMLDM-GFEPQIRRIVEQD 367
++ TPG ++D R K + L+ + VLDEAD M+ M G + Q RI ++
Sbjct: 499 ---------VIGTPGTVMDWSHRFKALPLEKLRVFVLDEADVMISMQGHQDQSTRIQKRL 651
Query: 368 TMPPKGVRHTMMFSATFPKEIQMLARDFL 396
+ G + ++FSAT+ + + A+ +
Sbjct: 652 S---SGCQ-MLLFSATYDQVVMQFAQRII 726
>07310
Length = 712
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 119/219 (54%)
Frame = +2
Query: 325 RLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 384
R++D+M + + D C LVLDEAD++L F+ + I+ +PP+ R +++SATF
Sbjct: 2 RILDLMNKRLVKPDTCGILVLDEADKLLSQDFKGMLDNIIAH--LPPQ--RQILLYSATF 169
Query: 385 PKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTL 444
P ++ + +L + + T + +TQ +V+E ++ L+ L + + + ++
Sbjct: 170 PLSVEQFMKKYLKNPYEINLME-ELTLKGVTQYYAFVQE-KQKVHCLNTLFSKLQINQSI 343
Query: 445 VFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGL 504
+F + + + L + + Y+C IH +Q+ R H FR G LV + + RG+
Sbjct: 344 IFCNSTQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGI 523
Query: 505 DISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 543
DI V VINFD P E Y+HRIGR+GR G+LG+A +
Sbjct: 524 DIQAVNVVINFDFPKHAETYLHRIGRSGRYGHLGVAINL 640
>22006
Length = 3414
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 88/153 (57%)
Frame = +2
Query: 202 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGR 261
PTP+Q+ IP+I E +D++A A+TGSGKTAAFL+P+L + +K + G
Sbjct: 3005 PTPIQRKTIPVIMEGKDMVAMARTGSGKTAAFLVPMLER------------LKMHSSKGA 3148
Query: 262 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVA 321
R +L+L+PTRELA+Q + ++ +R V+ GG Q L + +++A
Sbjct: 3149 R-----ALILSPTRELALQTLKFTKELGKFLDLRAAVILGGDRMEDQFSALHQNPDIIIA 3313
Query: 322 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 354
TPGRL+ ++ K L Y+V DEADR+ +M
Sbjct: 3314 TPGRLLHVLVEMKKSLKEVIYVVFDEADRLFEM 3412
>14337
Length = 693
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 77/128 (60%)
Frame = +2
Query: 443 TLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAAR 502
LVFV++K+ A L + +++ +IH D+ Q +R+ + F GR +LV T + R
Sbjct: 65 VLVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDATVRAFTEGRVWVLVCTELMGR 244
Query: 503 GLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEA 562
G+D + VIN+D P++ Y+HRIGRTGR G G A +FF E+++ + + +++ EA
Sbjct: 245 GIDFKGINLVINYDFPTNAVSYIHRIGRTGRAGVPGRAITFFTEQDVTHLRSIANIIKEA 424
Query: 563 KQEVPSWL 570
EVP ++
Sbjct: 425 GCEVPEYM 448
>19525
Length = 585
Score = 95.9 bits (237), Expect = 5e-20, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 4/186 (2%)
Frame = +2
Query: 269 LVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVD 328
LVL PTRELAVQ+Y+ ++ S +++ C+ GG D Q L ++VATPGRL+D
Sbjct: 23 LVLVPTRELAVQVYQVGQQISQYTKISICLAAGGLDIKGQEAALRLCPDIVVATPGRLID 202
Query: 329 MMERG-KIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKE 387
+ + + LVLDEADRMLD F Q+ I+ R TM+FSAT
Sbjct: 203 HLHNAPNFTIAHVEILVLDEADRMLDEYFAAQMTEIIRMCNFQ----RQTMLFSATMSDA 370
Query: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV---EELDKRSFLLDLLNATGKDSLTL 444
+Q LA L E + + V + + + Q+ V + +E D+ + + L++ T D +
Sbjct: 371 VQDLASVSLKEAVKVFVNQNTDIALGLQQEFVRIRENKEGDREAIVSSLVSRTFCDK-CM 547
Query: 445 VFVETK 450
VF++TK
Sbjct: 548 VFLQTK 565
>30136
Length = 524
Score = 93.2 bits (230), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 69/124 (55%)
Frame = +2
Query: 199 YTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGR 258
Y PTP+Q PI + + A+TGSGKT ++LP + I P +
Sbjct: 191 YKSPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYILPAIVHINNQQPLQ---------- 340
Query: 259 YGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHL 318
R + PI+LVLAPTRELA QI + A +F S VR V+GGA Q+RDL+RGC +
Sbjct: 341 ---RGEGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEI 511
Query: 319 LVAT 322
++AT
Sbjct: 512 VIAT 523
>19640
Length = 456
Score = 89.0 bits (219), Expect(2) = 3e-18, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = -1
Query: 445 VFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGL 504
+F T++ D L + + +++HGD Q+DRE + QFRSG +L+ T + ARG+
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 505 DISNVKHVINFDLPSDIEEYVHRIGRTG 532
D+ V VIN+DLPS+ E Y+HRIGR G
Sbjct: 276 DVQQVSLVINYDLPSNRENYIHRIGRGG 193
Score = 21.2 bits (43), Expect(2) = 3e-18, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 533 RVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPS 568
R G G+A +F + + I KD+ +E+P+
Sbjct: 193 RFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPA 86
>34295
Length = 694
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 58/102 (56%)
Frame = -1
Query: 443 TLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAAR 502
++F TKK L L +HG QK+R AL +F+S L+AT VAAR
Sbjct: 535 VMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLIATDVAAR 356
Query: 503 GLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFF 544
GLDI +V+ VIN LP +EY+HR+GRT R G G+A S F
Sbjct: 355 GLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGVAISIF 230
>12995
Length = 1072
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +3
Query: 425 DKRSFLLDLL-NATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEAL 483
DK + LL LL + ++ LT+VFV TK + L L + ACT I+ Q R+ +
Sbjct: 81 DKEAMLLYLLRDVISENDLTVVFVATKHHVEYLNTLLTKCGIACTYIYSSLDQTARKIHV 260
Query: 484 HQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 543
+F + +++ T +AARG+DI + +V+NF P+ + +VHR+GR R G G A S
Sbjct: 261 AKFTHKQVKVMLVTDLAARGIDIPQLDNVVNFHFPAKAKLFVHRVGRVARAGRSGTAYSL 440
>19172
Length = 484
Score = 79.7 bits (195), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Frame = -1
Query: 394 DFLDEYIFLAVGRVG-STSENITQKVVWVEELDKRSFLLDLLNATG--KDSLTLVFVETK 450
+FL+ YI + +G + S + NI Q V +E +K + L+ LL ++ T++FVETK
Sbjct: 484 EFLNNYIQVNIGSLSLSANHNILQIVDVCDESEKIAKLIQLLTQISGENETKTIIFVETK 305
Query: 451 KGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVK 510
K D + + ++ + +IHGD+SQ++R+ L FR+GR ILVAT VAARGL +
Sbjct: 304 KRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLG----E 137
Query: 511 HVINFDLPS 519
+ F LP+
Sbjct: 136 FFVAFALPA 110
>00617
Length = 1505
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%)
Frame = -3
Query: 459 FLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLP 518
L + +++C +H Q+ R +L +F+S + IL++T VA+RGLDI V +IN ++P
Sbjct: 1500 MLEKLQFSCAVLHSMIPQRFRLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIP 1321
Query: 519 SDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDL 555
+ +YVHR+GRT R G G + S E ++ + K +
Sbjct: 1320 NRPRDYVHRVGRTARAGRCGQSISLVTEFDIKLIKSI 1210
>11160
Length = 646
Score = 65.5 bits (158), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Frame = -1
Query: 301 GGADTVQQI-RDLERGCHLLVATPGRLVDMMERGKIGLDFC------KYLVLDEADRMLD 353
GG I + ++ G +L+ATPGRL D+ R + G + + LVLDEADR+LD
Sbjct: 646 GGVSCSHDISKFMKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLLD 467
Query: 354 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSE- 412
MGFE I I+ PK +R T +FSAT E++ L R L + + V E
Sbjct: 466 MGFEASINTILGH---LPK-LRRTGLFSATQTDEVENLIRAGLRNPLRVTVKEKKLAGEA 299
Query: 413 ------NITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQ--ER 464
++ + VE +K S L+ L +D L L+F T D L Q +
Sbjct: 298 DQRTPSTLSNYYMIVEAEEKFSQLVKFLKTHHRDKL-LLFFSTCACVDYFSMCLTQLLKH 122
Query: 465 YACTSIHGDRSQK 477
SIH QK
Sbjct: 121 MQVLSIHSKMKQK 83
Score = 25.4 bits (54), Expect(2) = 2e-12, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 473 DRSQKDREE--ALHQFRSGRKPILVATAVAARGLD 505
D Q + EE +FRS +LV T V ARG+D
Sbjct: 107 DSQQDEAEEKPVFAKFRSITSGLLVCTDVMARGVD 3
>17708
Length = 882
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%)
Frame = +1
Query: 217 RDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRE 276
RDLM A+TGSGKT AFL+P + +Y LK M NG ++++PTRE
Sbjct: 553 RDLMGAAKTGSGKTLAFLIPAIELMY------KLKFMPRNGTG--------CIIISPTRE 690
Query: 277 LAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMME 331
L++Q + + ++ GG + +++ L++G +++VATPGRL+D ++
Sbjct: 691 LSMQTFNVLTELLKYHHHTFGLIMGGVNRHDEVKKLKKGVNIIVATPGRLLDHLQ 855
>39583
Length = 234
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = -3
Query: 479 REEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVG 535
R EAL +F+ G +L+AT +A+RGLDI VK VINF +PS ++ YVHR+GRT R G
Sbjct: 172 RLEALKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTLKHYVHRVGRTARAG 2
>11624
Length = 2257
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Frame = -1
Query: 409 STSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQERYACT 468
+T E +T+ +V + +K +L L+ S+ L F + + L L + Y
Sbjct: 994 TTPEGLTEYIVESDSSEKPLLVLHFLHNLKFRSV-LCFTNSVETTHRL--CLLVKLYGGL 824
Query: 469 SIHGDRSQ---KDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYV 525
S+ S+ + R++ L QF G+ +LV + ARG+D+ NVK+VI++D P I+ Y+
Sbjct: 823 SVKEFSSRLPGERRKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNPPYIKTYI 644
Query: 526 HRIGRTGRVGNLGLATSFFNERNLNITKDLL 556
HR+GRT R G G A S ++ K ++
Sbjct: 643 HRVGRTARAGRAGTAISLLEKKEFFHFKQMM 551
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Frame = -3
Query: 217 RDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRE 276
RD+ A TGSGKT A+ LPI+ + LK R + ++++ P R+
Sbjct: 1814 RDICVSAPTGSGKTLAYTLPII---------QCLKQ--------RMVPHVRAVIVLPVRD 1686
Query: 277 LAVQIYEEARKFSYRSRVRPCVVYGGA------DTVQQIR---DLERGCHLLVATPGRLV 327
LA Q+Y+ + + ++ +V G DT+ + R +LVATPGRLV
Sbjct: 1685 LAEQVYQVFCHYCADTPLKVGIVVGKTVFNVEQDTLVKKRYGGVYHSVIDILVATPGRLV 1506
Query: 328 DMMERGK-IGLDFCKYLVLDEADRMLD 353
D + L ++LV+DEADRM++
Sbjct: 1505 DHINSTPGFDLSHLRFLVIDEADRMME 1425
>19151
Length = 625
Score = 62.8 bits (151), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Frame = -3
Query: 493 ILVATAVAARGLDISNVKHVINFDLP------SDIEEYVHRIGRTGRVGNLGLATSFFN- 545
+L+ T V +RG+DI V V+NFDLP +D E Y+HRIGRTGR G G+A + +
Sbjct: 620 VLITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIAINLIDG 441
Query: 546 ERNLNITK 553
E+++N+ +
Sbjct: 440 EKSMNVCR 417
>12121
Length = 465
Score = 62.0 bits (149), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = -3
Query: 318 LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 361
+ +ATPGRL+D +E + L C YLVLDEADRMLDMGF P R
Sbjct: 463 ICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFXPP*R 332
Score = 36.6 bits (83), Expect = 0.030, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -2
Query: 167 VEATGNNCPPHIENFSDXXXXXXXXXXXXLTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 226
+ +G P I F + +T PTP+Q + PI +DL+ AQTG
Sbjct: 188 ITLSGRYLPNPILTFEEANLPDYVMSQIHRNNWTSPTPIQSQSWPIAMSGKDLVGIAQTG 9
Query: 227 SG 228
SG
Sbjct: 8 SG 3
>31220
Length = 818
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +2
Query: 500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLL 559
A+RG+D V +VINFD P D+ Y+HR GRT R N G SF + + L I + + + L
Sbjct: 161 ASRGIDFQGVNNVINFDFPLDVTSYIHRAGRTARGNNTGSVLSFVSVKELPINQAVEEKL 340
>10649
Length = 472
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +1
Query: 470 IHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIG 529
+HG Q R + +F + IL+ T +A RGLD V VI D P D+ Y+HR G
Sbjct: 82 LHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLDCPVDVNTYIHRAG 261
Query: 530 RTGR 533
RT R
Sbjct: 262 RTAR 273
>03381
Length = 1206
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +3
Query: 504 LDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAK 563
LDI +++ V+N+D+ DI+ + HR+GRTGR G G A + +++ L+ L A
Sbjct: 3 LDIPHIRTVVNYDVARDIDTHTHRVGRTGRAGEKGSAYTLITDKDKEFAPLLVRNLEGAN 182
Query: 564 QEVPSWLESMAYE 576
Q P L +A +
Sbjct: 183 QTPPPALLDLANQ 221
>08036
Length = 1226
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 501 ARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN 545
ARG+D NV +VINF+ P ++ Y+HR+GRT R G A S +
Sbjct: 612 ARGIDFQNVSNVINFEFPKTVDAYIHRVGRTARGDKQGCALSLIS 746
>31899
Length = 453
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 45/85 (52%)
Frame = -1
Query: 199 YTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGR 258
+ RP+P+Q AIP+ + DL+ A++G+GKT F + L I T
Sbjct: 285 FERPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFSVVALEGIETT-------------- 148
Query: 259 YGRRKQYPISLVLAPTRELAVQIYE 283
R Q LVLAPTRE+A+QI+E
Sbjct: 147 -ARSTQV---LVLAPTREIALQIWE 85
>11423
Length = 1434
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = -2
Query: 510 KHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLL 556
K+VI++D P I+ Y+HR+GRT R G G A S ++ K ++
Sbjct: 1397 KYVISYDNPPYIKTYIHRVGRTARAGRAGTAISLLEKKEFFHFKQMM 1257
>33083
Length = 1931
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 502 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGR-VGNLGLATSFFNERNLNITKDLLDLLV 560
RGLDI V ++ +D P + +EY+HR+GRT R G+ G A L K L V
Sbjct: 1 RGLDIPQVDWIVQYDPPDESKEYIHRVGRTARGEGSSGKALLLLQPEELGFLKFLRAAKV 180
Query: 561 EAKQEVPSW 569
+ ++ +W
Sbjct: 181 KVQEMDFNW 207
>06438
Length = 989
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 495 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 533
+ +A RGLD V VI D P D+ Y+HR GRT R
Sbjct: 25 LTVTLACRGLDFPAVNWVIQLDCPVDVNTYIHRAGRTAR 141
>34134
Length = 271
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 31/65 (47%)
Frame = +3
Query: 210 IPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISL 269
+PI RD + AQTGSGKT +F+LP + I E R PI+L
Sbjct: 84 VPIAMSGRDCVGIAQTGSGKTLSFILPAIVHINHQPTLE-------------RGDGPIAL 224
Query: 270 VLAPT 274
VL PT
Sbjct: 225 VLVPT 239
>01821
Length = 910
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 494 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 533
LV+T V GLDI +V ++ +D V R+GRTGR
Sbjct: 13 LVSTCVGEEGLDIGDVDLIVCYDAHKSPVRLVQRMGRTGR 132
>01797
Length = 1448
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = -3
Query: 439 KDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFR---SGRKPILV 495
+DS L+F + + D LE++ F + + G +DR++++ +F S + ++
Sbjct: 573 QDSRVLIFSQMTRMLDILEDYCFWRGFDYCRLDGSTPHEDRQKSILEFNAPDSSKFVFML 394
Query: 496 ATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVG 535
+T G++++ VI +D + + + + R R+G
Sbjct: 393 STRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIG 274
>33543
Length = 471
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 524 YVHRIGRTGRVGNLGLATSFF-NERNLNITKDLLDLLVEAKQEVPSWLESMAY 575
Y+HR+GR GR G GLA +F NE ++ + + + ++P + Y
Sbjct: 6 YLHRVGRAGRFGTRGLAITFVSNETEADVLNSVQERFEVSVTDLPEQISVSTY 164
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|30424591|ref|NP_776112.1| ilvB (bacterial
acetolactate synthase)-like [Mus musculus]
(632 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02928 428 e-120
04384 202 2e-55
11777 61 2e-09
12890 51 2e-06
22483 44 3e-04
18033 29 5.2
>02928
Length = 1057
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/352 (59%), Positives = 257/352 (73%), Gaps = 1/352 (0%)
Frame = +1
Query: 76 GHISPLLVACEKLGIRVVDTRHEVTAVFAADXXXXXXXXXXXXXXXXXXXXXNTVTAVKN 135
GHISP+LVACEK+GIRVVDTRHEVTAVFAAD NTVTAVKN
Sbjct: 1 GHISPILVACEKIGIRVVDTRHEVTAVFAADAVARMSGTVGVAAVTAGPGLTNTVTAVKN 180
Query: 136 AQVAQSPVLLLGGAASTLLQKRGALQAIDQMSLFRPLCKFCASVRRVRDIVPTLRTAIAA 195
AQ+A+SPVLL+GGAA+TLL+ RGALQ IDQMSLF+PLCK+CA+V VR+IVPTLR A+
Sbjct: 181 AQMAESPVLLIGGAAATLLKGRGALQDIDQMSLFKPLCKYCATVSTVREIVPTLRKALQV 360
Query: 196 AQSGTPGPVFVELPLDVLYPYFMVEKEM-IPTKLPNSLMGRVVVWYLQNCLANLFVGAWE 254
AQSGTPGPVFVE P+D LY Y +V++E+ + K P SLM +VV WYLQN L+NLF GAWE
Sbjct: 361 AQSGTPGPVFVEFPIDTLYMYDLVKREIGMKDKGPTSLMQKVVNWYLQNHLSNLFAGAWE 540
Query: 255 PRPEGPLPLDIPQASPQQVQRCVEILSRAKRPLLVLGSQALLPPTPANKLRAAVETLGVP 314
PR PLP+ IP+AS Q+Q+C++++S+AK+P+++LGSQ+ LPPTP +LR A+E LG+P
Sbjct: 541 PRDTSPLPVSIPRASDSQIQQCIKLVSKAKKPVILLGSQSTLPPTPVEELRTALEDLGIP 720
Query: 315 CFLGGMSRGLLGRNHPLHIRQNRSXXXXXXXXXXXXXXXCDFRLSYGRVLNRKSSIIIVN 374
CFLGGMSRGLLGR+ + +RQ R CDFRL YGRVL+R+S II +N
Sbjct: 721 CFLGGMSRGLLGRHSDIQVRQQRRDALKEADLVILAGAVCDFRLGYGRVLSRRSKIIAIN 900
Query: 375 RNRDDLLLNSDIFWKPQEAVQGDVGSFMIKLVEGLQGQMWSSDWAEELRKAD 426
R++D L N+D+FWKP AVQGDVGS M + GL+G DW LR D
Sbjct: 901 RDKDQLWKNADMFWKPTVAVQGDVGSTMAAVCRGLKGYKCDPDWLALLRSRD 1056
>04384
Length = 779
Score = 202 bits (514), Expect(2) = 2e-55, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 116/144 (80%)
Frame = +2
Query: 470 DFVATAAYLVQPRGPLRWLDPGAFGTLGVGAGFALGAKLCQPEAEVWCLFGDGAFGYSLI 529
DFVATAAY+++PRGPL WLDPGAFGTLGVG GFALGAKLC+P+++VW ++GDG+ GYS+
Sbjct: 2 DFVATAAYILRPRGPLCWLDPGAFGTLGVGGGFALGAKLCRPDSDVWIIYGDGSLGYSVA 181
Query: 530 EFDTFVRHKVPVIALVGNDAGWTQISREQVPRLGSDVACSLAYTDYHKAAMGLGAQGLIL 589
EFDTF RHK PV+ALVGNDAGWTQI+REQVP S VAC LA++DY A G G +G+ L
Sbjct: 182 EFDTFTRHKTPVLALVGNDAGWTQIAREQVPLFNSSVACDLAFSDYEDVARGYGGKGVRL 361
Query: 590 SRDNKDQVVKVLREGQQLCQDGHA 613
R N+D++ VL++ + + GH+
Sbjct: 362 DRSNEDKMAAVLQQALKDYRQGHS 433
Score = 32.3 bits (72), Expect(2) = 2e-55, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 18/18 (100%)
Frame = +1
Query: 615 VVNILIGRTDFRDGSISV 632
+VN+LIG+T+FR+GSISV
Sbjct: 439 LVNVLIGKTNFREGSISV 492
>11777
Length = 436
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Frame = +2
Query: 415 SSDWAEELR---KADQQK-EQTYRDKALMPVLQHLNPVWVLQQVEETLPDNALLVVDGGD 470
SS W LR A+Q+ E+ +D + LN +V+++LP + L+V +G +
Sbjct: 74 SSPWWGTLRAKISANQKNVEEMSKDHGI-----PLNYYAAFAEVQKSLPKDCLIVNEGSN 238
Query: 471 FVATAAYLVQPRGPLRWLDPGAFGTLGVGAGFALGAKL-CQ---PEAEVWCLFGDGAFGY 526
+ ++ P LD G FGT+GVG GFAL A L C+ P V C+ GD AFG+
Sbjct: 239 TMDIGRTMLPNNLPRHRLDAGTFGTMGVGIGFALAAALWCRDYAPGKRVVCVEGDSAFGF 418
Query: 527 SLIEFD 532
S +E +
Sbjct: 419 SGMEIE 436
>12890
Length = 418
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = -2
Query: 488 LDPGAFGTLGVGAGFALGAKL-CQ---PEAEVWCLFGDGAFGYSLIEFDTFVRHKVPVI 542
LD G FGT+GVG GFAL A L C+ P V C+ GD AFG+SL F R+ P++
Sbjct: 282 LDAGTFGTMGVGIGFALAAALWCRDYAPGKRVVCVEGDSAFGFSL-----FYRNISPLV 121
>22483
Length = 676
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Frame = +1
Query: 488 LDPGAFGTLGVGAGFALGAKL-CQ---PEAEVWCLFGDGAFGYSL 528
LD G FGT+GVG GFAL A L C+ P V C+ GD AFG+SL
Sbjct: 319 LDAGTFGTMGVGIGFALAAALWCRDYAPGKRVVCVEGDSAFGFSL 453
>18033
Length = 587
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 236 VVVWYLQNCLANLFVGAWEPRPEGPLPL 263
VV+W +CL+N ++ E +GP+P+
Sbjct: 24 VVLWQRAHCLSNSYLAVLEDSSDGPVPV 107
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|55926127|ref|NP_067262.1| spectrin beta 3 [Mus
musculus]
(2388 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19002 431 e-120
17613 106 6e-53
19147 129 1e-29
34010 124 2e-28
26578 123 1e-27
05733 80 7e-15
28965 77 8e-14
29446 74 5e-13
34417 67 1e-10
11159 66 2e-10
19246 66 2e-10
25051 65 4e-10
38533 56 2e-07
22703 55 2e-07
29517 53 2e-06
17567 48 4e-05
04951 48 6e-05
09711 47 9e-05
09100 37 0.14
29667 35 0.50
32371 34 0.72
18202 33 1.7
>19002
Length = 842
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 198/259 (76%), Positives = 227/259 (87%)
Frame = -2
Query: 108 KGRMRIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISV 167
KG+MRIHCLENVDKAL FL EQ+VHLENMG+HDIVDG+ RLTLGL+WTIILRFQIQDI +
Sbjct: 778 KGKMRIHCLENVDKALTFLHEQRVHLENMGAHDIVDGSSRLTLGLIWTIILRFQIQDIMI 599
Query: 168 ETEDNKEKKSAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFES 227
E DN E KSAKDALLLWCQMKTAGYPNVNV NFTTSWRDGLAFNAI+HKHRPDL+ ++
Sbjct: 598 EEVDNSETKSAKDALLLWCQMKTAGYPNVNVRNFTTSWRDGLAFNAIIHKHRPDLVQYDR 419
Query: 228 LKKCNAHYNLQNAFNLAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALA 287
L K +A NLQNAF +AE +LGLT LL+PEDVNV+ PDEKSIITYV TYYHYFSKMKA +
Sbjct: 418 LHKSSAIQNLQNAFTVAEDKLGLTALLEPEDVNVEYPDEKSIITYVVTYYHYFSKMKADS 239
Query: 288 VEGKRIGKVLDHAMEAEHLVEKYESLASELLQWIEQTIVTLNDRQLANSLSGVQNQLQSF 347
V+GKRIGKV+D+A+ E+ +E+YE+L S+LL+WIEQTIV L DRQ ANSL+GVQ QL +F
Sbjct: 238 VQGKRIGKVIDNAINTENSIEEYETLTSDLLEWIEQTIVILRDRQFANSLTGVQQQLAAF 59
Query: 348 NSYRTVEKPPKFTEKGNLE 366
N+YR VEKPPKF EKGNLE
Sbjct: 58 NTYRIVEKPPKFDEKGNLE 2
>17613
Length = 1108
Score = 106 bits (265), Expect(3) = 6e-53, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
Frame = +3
Query: 238 QNAFNLAEKELGLTKLLDPED-VNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRIGKV 296
Q+ F K L + ++LDPED VN +PDE+S++ YV++YYH FS + RI KV
Sbjct: 366 QHCF*HRRKHLDIPRMLDPEDMVNSAKPDERSVMAYVSSYYHAFSGAQQAETAANRICKV 545
Query: 297 LDHAMEAEHLVEKYESLASELLQWIEQTIVTLNDRQLANSLSGVQNQLQSFNSYRTVEKP 356
L E E L+E+YE LAS+LL+WI +T L +R N+L G +++L F YR +KP
Sbjct: 546 LKVNQENERLMEEYERLASDLLEWIRRTRPWLENRVTDNTLPGTRHKLDEFRDYRRKQKP 725
Query: 357 PKFTEKGNLEVL 368
P + + + L
Sbjct: 726 PSWRTRPSWRTL 761
Score = 73.6 bits (179), Expect(3) = 6e-53, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +1
Query: 189 KTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNAFNLAE 245
KTA Y NVNV NF S++DGLAF A++H+HRP+L+D+ SL K N NL AF++AE
Sbjct: 220 KTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPELIDYHSLSKDNPLENLNTAFDIAE 390
Score = 69.3 bits (168), Expect(3) = 6e-53, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +2
Query: 131 VHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMK 189
V L ++G+ +IVDGN ++TLG++WTIILRF IQDI+V E+ +AK+ LLLWCQ K
Sbjct: 65 VKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDITV------EELTAKEGLLLWCQRK 223
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Frame = +2
Query: 357 PKFTEKGNLEVLLFTIQSKLRANNQKVYTPREGRLISDINKAWERLEKAEHERELALRTE 416
PK +K LE T+Q++LR +N+ Y P EG+++SDI AW+ LE AE E L +E
Sbjct: 725 PKLEDKAKLENSFNTLQTRLRLSNRPAYLPTEGKMVSDIANAWKGLEHAEKGFEEWLLSE 904
Query: 417 LIRQEKLEQLAARFDRKAAMRETWLSENQRLVSQDNFG-LELAAVEAAVRKHEAIETDIV 475
L R E+L+ LA +F K + E W + ++ +F L ++A +KHEA E+D+
Sbjct: 905 LQRLERLDHLAQKFRHKCEIHEEWSQGKEDMLQSRDFKQCRLNELKAMKKKHEAFESDLA 1084
Query: 476 AYSGRVQ 482
A+ RV+
Sbjct: 1085AHQDRVE 1105
>19147
Length = 474
Score = 129 bits (323), Expect(2) = 1e-29, Method: Composition-based stats.
Identities = 58/106 (54%), Positives = 81/106 (76%)
Frame = +1
Query: 125 FLKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKEKKSAKDALLL 184
++ + V L ++G+ +IVDGN ++TLG++WTIILRF IQDI+VE + +AK+ LLL
Sbjct: 49 YIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDITVE------ELTAKEGLLL 210
Query: 185 WCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKK 230
WCQ KTA Y NVNV NF S++DGLAF A++H+HRP+L+D+ SL K
Sbjct: 211 WCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPELIDYHSLSK 348
Score = 21.9 bits (45), Expect(2) = 1e-29, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 110 RMRIHCLENVDKALQFLKEQK 130
+MR H + NV+KAL+ + Q+
Sbjct: 3 KMRFHKIANVNKALELHRLQR 65
>34010
Length = 832
Score = 124 bits (312), Expect(2) = 2e-28, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
Frame = +3
Query: 1923 MDGINLQMDAQE-RPRDVSSADLVIKNQQGIKAEIEARADRFSSCIDMGQELLARSHYAA 1981
+DG + Q D +PRDVS +L++ N Q +KAEI+AR + F+ CI++G++LL R HY
Sbjct: 45 VDGRHHQTDEHAGKPRDVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLLNRKHYRQ 224
Query: 1982 EEISEKLSQLQSRRQETADKWQEKMDWLQLVLEVLVFGRDAGMAEAWLCSQEPLVRSAEL 2041
EE+ EKL QL R + D W+++ + LQL+LEV F RDA +AEAWL +QE + +L
Sbjct: 225 EEVREKLIQLTLERLDMTDLWKDRWEHLQLILEVYQFARDAAVAEAWLVAQEQYFLNQDL 404
Query: 2042 GCTVDEVESLIK 2053
G T+D VE+LIK
Sbjct: 405 GDTLDAVENLIK 440
Score = 21.9 bits (45), Expect(2) = 2e-28, Method: Compositional matrix adjust.
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 2066 EERFSALEKLTAL 2078
EERF+ALEK T
Sbjct: 475 EERFAALEKPTTF 513
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Frame = +3
Query: 1518 KDLPSVQLLMKKNQTLQKEIQGHEPRIA-------DLKERQRTL------GTAAAGPELA 1564
+D+ V+LLM +Q+L+ EI E A DL R+ E
Sbjct: 90 RDVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLLNRKHYRQEEVREKLIQLTLERL 269
Query: 1565 ELQEMWKRLSHELELRGKRLEEALRAQQFYRDAAEAEAWMGEQELHMMGQE 1615
++ ++WK R + L+ L QF RDAA AEAW+ QE + + Q+
Sbjct: 270 DMTDLWKD-------RWEHLQLILEVYQFARDAAVAEAWLVAQEQYFLNQD 401
Score = 32.7 bits (73), Expect = 1.9, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 1907 TDKFRFFKAVRELMLWMDGINLQMDAQERP 1936
+D +RF +L LWMD I QM+ QE P
Sbjct: 1 SDFYRFMLMAHDLHLWMDDIIRQMNTQENP 90
>26578
Length = 430
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 82/113 (72%)
Frame = +1
Query: 1705 DLEQWIQEREVVAASHELGQDYEHVTMLRDKFREFSKDTSTIGQERVDSXXXXXXXXXXX 1764
DL QWI E+ +VA S++ GQDYEHV+ML+++F+EF++DT ++GQERV S
Sbjct: 61 DLLQWIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTESMGQERVASANEICDQLIAL 240
Query: 1765 XXXXRATVAEWKDSLNEAWADLLELLDTRGQVLAAAYELQRFLHGARQALARV 1817
A++AEWKD++NEAWADLLEL+DTR Q+L +++EL +FL+ + L R+
Sbjct: 241 DHSDSASIAEWKDNVNEAWADLLELIDTRTQLLQSSWELHKFLYECKDTLERI 399
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +1
Query: 543 LMDWMAEMKGRLQSQDLGKHLAGVEDLL-QLHELVEADIAVQAERVRAVSASALRFCDPG 601
L+ W+AE S D G+ V L Q E ++ ERV ASA CD
Sbjct: 64 LLQWIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTESMGQERV----ASANEICDQL 231
Query: 602 KEYRPCDPQLVSERVATLEQSYEALCELAATRRARLEESRRLWRFLWEVGEA 653
D ++E + +++ L EL TR L+ S L +FL+E +
Sbjct: 232 IALDHSDSASIAEWKDNVNEAWADLLELIDTRTQLLQSSWELHKFLYECKDT 387
>05733
Length = 1021
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = +2
Query: 181 ALLLWCQ--MKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQ 238
+LL WCQ + Y V++ +FT+SWR GLAF A++H RP L+ SL +C N Q
Sbjct: 467 SLLRWCQRVLNXGTYRGVHIIDFTSSWRSGLAFCALIHAFRPHLISPASLMECETVKNNQ 646
Query: 239 NAFNLAEKELGLTKLLDPEDV-NVDQPDEKSIITYVATYYHYF 280
AF++A+KELG+ ++ ED+ PD+ +++ Y++ ++ F
Sbjct: 647 LAFDVAQKELGIAPVMRGEDMAACAVPDKLTMVAYLSQFHELF 775
>28965
Length = 421
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 67/115 (58%)
Frame = +2
Query: 907 RVTAVNDIAEQLLKASPPGKDRIIGTQEQLNQRWQQFRSLADGKKAALTSALSIQNYHLE 966
+V VN +AEQL+ P ++ I QE++N+ W++ R L+ ++ L A IQ ++ +
Sbjct: 29 KVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRD 208
Query: 967 CTETQAWMREKTKVIESTQGLGNDLAGVLALQRKLAGTERDLEAISARVGELTQE 1021
ET AW++EK V+ ST G DLA V LQRK G ERDL A+ +V L E
Sbjct: 209 ADETIAWIQEKDAVL-STDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGTE 370
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Frame = +2
Query: 1771 TVAEWKDSLNEAWADLLELLDTRGQVLAAAYELQRFLHGARQALARVQHKQQQLP-DGTG 1829
T+ + ++ +NEAW L +L R + L A+E+QRF A + +A +Q K L D G
Sbjct: 92 TIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDYG 271
Query: 1830 RDLNAAEALQRRHCAYEHDIQALSTQVQQVQDDGQRLQKAYAGDKAEEI 1878
RDL + + LQR+H E D+ AL +V + + RLQ + GD++E+I
Sbjct: 272 RDLASVQTLQRKHEGVERDLAALEEKVNALGTESVRLQGIH-GDQSEQI 415
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +2
Query: 394 DINKAWERLEKAEHERELALRTELIRQEKL--EQLAARFDRKAAMRETWLSENQRLVSQD 451
++N+AW+RL R+L+L +RQE+L RF+R A W+ E ++S D
Sbjct: 113 EVNEAWKRL------RQLSL----LRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTD 262
Query: 452 NFGLELAAVEAAVRKHEAIETDIVAYSGRV 481
++G +LA+V+ RKHE +E D+ A +V
Sbjct: 263 DYGRDLASVQTLQRKHEGVERDLAALEEKV 352
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = +2
Query: 1466 VEEKFRALCQPMKERCRRLHASREQHQFHRDVEDEILWVTERLPMASSLEHGKDLPSVQL 1525
V E ++ L Q R RL+ + E +F+RD ++ I W+ E+ + S+ ++G+DL SV
Sbjct: 116 VNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASV-- 289
Query: 1526 LMKKNQTLQKEIQGHEPRIADLKERQRTLGTAAA 1559
QTLQ++ +G E +A L+E+ LGT +
Sbjct: 290 -----QTLQRKHEGVERDLAALEEKVNALGTESV 376
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +2
Query: 1534 QKEIQGHEPRIADLKERQRTLGTAAAGPELA------ELQEMWKRLSHELELRGKRLEEA 1587
QK++Q HE ++ ++ L T E E+ E WKRL LR +RL A
Sbjct: 2 QKDLQNHEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGA 181
Query: 1588 LRAQQFYRDAAEAEAWMGEQELHMMGQEKAKDELSAQAEVKKHQVLEQALADYAQTIKQL 1647
Q+F RDA E AW+ E++ + + +D S Q +KH+ +E+ LA + + L
Sbjct: 182 HEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNAL 361
Query: 1648 AASS 1651
S
Sbjct: 362 GTES 373
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Frame = +2
Query: 1353 VVSEKLEDLHRRWDELETTTQAKARSLFDANRAELFAQSCSALESWLESLQAQLHSDDYG 1412
+ +K E+++ W L + + L+ A+ + F + +W++ A L +DDYG
Sbjct: 92 TIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDYG 271
Query: 1413 KDLTSVNILLKKQQMLEREMA 1433
+DL SV L +K + +ER++A
Sbjct: 272 RDLASVQTLQRKHEGVERDLA 334
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%)
Frame = +2
Query: 619 LEQSYEALCELAATRRARLEESRRLWRFLWEVGEAEAWVREQQHLLASADTGRDLTGVLR 678
+ ++++ L +L+ R+ RL + + RF + E AW++E+ +L++ D GRDL V
Sbjct: 116 VNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQT 295
Query: 679 LLNKHAALRGEMSG 692
L KH + +++
Sbjct: 296 LQRKHEGVERDLAA 337
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%)
Frame = +2
Query: 1124 LRTLGEEVTRDQADPQCLFLRQRLEALGTGWEELGRMWESRQGRLAQAHGFQGFLRDARQ 1183
+ TL E++ D P+ +RQ+ E + W+ L ++ RQ RL AH Q F RDA +
Sbjct: 41 VNTLAEQLVTD-GHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADE 217
Query: 1184 AEGVLSSQEYVLSHTEMPGTLQAADAAIKKLEDFMSTMDANGERIRGLLEAGRQLVSKGN 1243
+ ++ VLS + L + +K E + A E++ L G + V
Sbjct: 218 TIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNAL---GTESVRLQG 388
Query: 1244 IHAEK 1248
IH ++
Sbjct: 389 IHGDQ 403
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 2014 EVLVFGRDAGMAEAWLCSQEPLVRSAELGCTVDEVESLIKRHEAFQKSAVAWEERFSAL 2072
E+ F RDA AW+ ++ ++ + + G + V++L ++HE ++ A EE+ +AL
Sbjct: 185 EIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNAL 361
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/117 (18%), Positives = 55/117 (47%)
Frame = +2
Query: 1637 LADYAQTIKQLAASSQDMIDHEHPESTRLTIRQAQVDKLYASLKELAGXXXXXXXXXXXX 1696
L ++ + ++ ++ ++ HPE + +Q +V++ + L++L+
Sbjct: 11 LQNHEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEI 190
Query: 1697 XXXXXXXDDLEQWIQEREVVAASHELGQDYEHVTMLRDKFREFSKDTSTIGQERVDS 1753
D+ WIQE++ V ++ + G+D V L+ K +D + + +E+V++
Sbjct: 191 QRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAAL-EEKVNA 358
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +2
Query: 755 DANDMEAWLVDALRLVSSPEVGHDEFSTQALARQHRALEEEIRAHRPTLDALREQAAAL 813
DA++ AW+ + ++S+ + G D S Q L R+H +E ++ A ++AL ++ L
Sbjct: 206 DADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGTESVRL 382
>29446
Length = 1445
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Frame = +3
Query: 58 VQKKTFTKWVNSHLARVTCRVGDLYSXXXXXXXXXXXXEVLSGETLPKPTK-GRMRIHCL 116
+QK TFT+W N HL V + DL S EVLSG+ K R L
Sbjct: 999 IQKNTFTRWANEHLRTVNKAIADLESDFSDGLRLVALIEVLSGKKFKHVNKRPNFRTQKL 1178
Query: 117 ENVDKALQFLK-EQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKEK 175
ENV L+FL+ ++ + + N+ S DIVD +L LGL+WT+IL + I E E+
Sbjct: 1179 ENVTLTLKFLEDDEGIRIVNIDSTDIVDKKLKLILGLIWTLILHYSISMPMWEGEEPTPS 1358
Query: 176 K---SAKDALLLWCQMKT 190
+ + K LL W Q K
Sbjct: 1359 EGGPTPKQRLLNWIQSKV 1412
>34417
Length = 1096
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 201 FTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNAFNLAEKELGLTKLLDPED-V 259
++ W +GLAF A++H PD D+ L+ N YN + AF+ AEK ++ LLD ED +
Sbjct: 35 LSSCWNNGLAFCALIHHFYPDAFDYSQLQPQNRRYNFELAFDTAEKLADISPLLDVEDMI 214
Query: 260 NVDQPDEKSIITYVATYYHYF 280
+ PD K + TYV ++Y +
Sbjct: 215 KMKNPDWKCVFTYVQSFYRHL 277
>11159
Length = 520
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Frame = +2
Query: 2241 RSWQNVYCVLRRGSLGFYKD---ARAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFK 2297
RSW+ + LR L +KD R + H + + A A ++A DY K++HVF+
Sbjct: 65 RSWKMFFITLRDLVLYLHKDEHGFRKSQMSDNLHNAIRIHHALA--TMANDYTKKQHVFR 238
Query: 2298 LGLQDGKEYLFQAKDEAEMSSWLRVVNAAIATASSAPGES--------EEPVVPSASRGL 2349
L D EYLFQ D E+ SW+ +N A S+ P E+ + P++PSA L
Sbjct: 239 LQTADQAEYLFQTSDSKELHSWVETINYVCAAFSAPPLEAGVGSQKRFQRPLLPSAQTKL 418
>19246
Length = 440
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +2
Query: 2235 NKKAANRSWQNVYCVLRRGSLGFYKDARAASAGVPYHGE-VPVSLARAQGSVAFDY-RKR 2292
KK ++RSW+ V+ VLR +L KD R S + E P+S+ +A DY RKR
Sbjct: 44 GKKCSDRSWKQVWAVLRGHALFLIKDRRDGSTHPTFSFEEPPISIKSCLVDIAHDYSRKR 223
Query: 2293 KHVFKLGLQDGKEYLFQAKDEAEMSSWLRVV 2323
KHVF+L YL QA+D+ M SW++ +
Sbjct: 224 KHVFRLTTYSESVYLLQAEDKGTMMSWIQAI 316
>25051
Length = 1017
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Frame = -2
Query: 2195 PQSRSSEAAHGATLPTRG-PELSAQ-EQMEGMLCRKQEMEAFNKKA--ANRSWQNVYCVL 2250
P S S+ + GA P P+ S E +G + RK ME +K R W+ VY +L
Sbjct: 992 PPSTSAMSHLGAANPFLDVPDPSKTVEYKKGYVMRKSCMEPGRRKTPFGKRGWRMVYTIL 813
Query: 2251 RRGSLGFYKDARAASAG-VPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQ 2309
R L YKD G + V + A + A DY K++HVF+L D EYLFQ
Sbjct: 812 RDLILYQYKDEHQVKKGQFVESSQNVVRIHHALATKASDYTKKQHVFRLQTADWAEYLFQ 633
Query: 2310 AKDEAEMSSWLRVVNAAIATASSAP 2334
E+ W+ +N AT SS P
Sbjct: 632 TGGTIELQEWIDTINLVAATLSSPP 558
>38533
Length = 380
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Frame = +1
Query: 1497 VEDEILWVT-ERLPMASSLEHGKDLPSVQLLMKKNQTLQKEIQGHEPRI------ADLKE 1549
VEDE+ W +R P+A S + G L +VQ LMKK+Q L+ EI HEP I A
Sbjct: 1 VEDELSWYY*DRKPIAESTDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQMI 180
Query: 1550 RQRTLGTAAAGPELAELQEMWKRLSHELELRGKRLEEALRAQQFYRDAAEAEAWMGEQ 1607
R + TA L +L +R L AQ+FY + E E WM E+
Sbjct: 181 RTKHFATADIQTRLDDLTSPAQRSQVFYLL*KVETAGCFGAQKFYMEVNEVELWMNEK 354
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 769 LVSSPEVGHDEFSTQALARQHRALEEEIRAHRPTLDALREQA 810
+ S ++G+ + Q L ++H+ALE EI AH P +DA+ A
Sbjct: 43 IAESTDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSA 168
>22703
Length = 906
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%)
Frame = -3
Query: 1963 FSSCIDMGQELLARSHYAAEEISEKLSQLQSRRQETADKWQEKMDWLQLVLEVLVFGRDA 2022
F G+ +A H+ ++EI EK+ QL + + + Q LE +
Sbjct: 880 FDKFRKTGRSFIANGHFLSKEIEEKIKQLDQSLEGLIRNLEHRRKLHQQNLEAQQLRHEM 701
Query: 2023 GMAEAWLCSQEPLVRSAELGCTVDEVESLIKRHEAFQKSAVAWEERFSALEK 2074
EAW+ +EPL++ + G +++ E +++RH+ F K+ A E+R +AL++
Sbjct: 700 EQIEAWMNLREPLLKEKKFGESIEGAEEMLRRHD*F*KTVTAQEDRVNALQR 545
>29517
Length = 622
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = -1
Query: 2280 RAQGS----VAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIATASSAPG 2335
RA GS A DY KR +VF+L L G EYLFQAKD AE +W+ +N+
Sbjct: 619 RAAGSQL*GWAADYSKRPYVFRLKLSSGSEYLFQAKDAAERDTWIGRINSVTG------- 461
Query: 2336 ESEEPVVPSASRGLTRAMTMP 2356
EP A R A T P
Sbjct: 460 -GREPAFRLAHRRCXHAQTTP 401
>17567
Length = 448
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%)
Frame = -3
Query: 536 VFQDLLYLMDWMAEMKGRLQSQDLGKHLAGVEDLLQLHELVEADIAVQAERVRAVSASAL 595
+F+++ + + + E++ ++ +D GKHL +D+L+ H L EA + RVR ++
Sbjct: 383 MFREIESIQEELKEVQSKVVGEDYGKHLQATQDMLEQHSLQEAQLQALTRRVRKLN---- 216
Query: 596 RFCDPGKEYRPCDPQLVSERVATLEQSYEALCELAATRRARLEESRRLWRFLWEVGEAEA 655
++ + Q + +R+ L + + RR LE +++ ++FL + E +
Sbjct: 215 ------RKSQGAQEQSLDKRLEALNAQLNNVQAQSDKRRQGLETAQQYYQFLQDTEEEDR 54
Query: 656 WVREQQHLLASADTGRD 672
WV E+ + S G+D
Sbjct: 53 WVGERIDAVRSPSLGKD 3
>04951
Length = 2852
Score = 47.8 bits (112), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Frame = +1
Query: 116 LENVDKALQF---LKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDN 172
+EN + A+Q +K K+ L +G DI DGN LTLGLVW ++ + + +S TED
Sbjct: 7 IENCEYAVQLGPQMKVCKMKLVGIGGKDIHDGNPVLTLGLVWQLMRAYTLAILSKLTED- 183
Query: 173 KEKKSAKDALLL-WCQMKTAGYPNVNVHNFTTS-WRDGLAFNAIVHKHRPDLLDFESL-- 228
KK +D+ ++ W K + + +F S DG+ ++ +P ++++E++
Sbjct: 184 --KKPIQDSEIVDWVNSKVK--KDERIGSFQDSKLNDGVIVAKVIESIKPGIVNWENINP 351
Query: 229 -------KKCNAHYNLQNAFNLAEKELGLTKLLDPEDVNVDQPDEKSIITYVA 274
+ NA Y A LA K +G PED+ +P K ++T A
Sbjct: 352 NASEPDDRLANARY----AIGLARK-IGAGVYALPEDIVEVKP--KMLLTVFA 489
>09711
Length = 3041
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Frame = +1
Query: 116 LENVDKALQF---LKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDN 172
+EN + A++ +K KV L + DI+DGN LTLGLVW ++ + + +S TE+N
Sbjct: 1033 IENCNYAVELGPQVKLVKVKLVGIAGQDILDGNPVLTLGLVWQLMRAYTLAILSKITENN 1212
Query: 173 KEKKSAKDALLLWCQMK------TAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFE 226
K + + ++ W K +G+ + ++ DG+ ++ +P +++++
Sbjct: 1213 --KPISDNEIITWVNSKIKKDDRISGFQDRKLN-------DGVIVARVIEAIKPGIVNWD 1365
Query: 227 SLKKCNAH------YNLQNAFNLAEKELGLTKLLDPEDVNVDQPDEKSIITYVAT 275
++ C+A N + A LA K +G PED+ +P K ++T A
Sbjct: 1366 NI-DCSARDYQDRLTNARYAIGLARK-IGAGVYALPEDIVEVKP--KMLLTVFAC 1518
>09100
Length = 930
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Frame = +1
Query: 59 QKKTFTKWVNSHLARVTCR--VGDLYSXXXXXXXXXXXXEVLSGETLP-----KPTKGRM 111
Q + W+NS L + + DL ++S + +P T M
Sbjct: 463 QLSAYMAWINSQLKKKPGAHLIEDLRHDMRDGVVFADVIHIVSKQQIPGIQNVPTTLDEM 642
Query: 112 RIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQ 161
R +NVD+ L F+ + ++ + + S DIV+GN + + L+ + ++
Sbjct: 643 R----QNVDRVLHFMTQNRIKMHRISSRDIVEGNLKAVMRLILALAAHYK 780
>29667
Length = 466
Score = 34.7 bits (78), Expect = 0.50, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 2292 RKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIATA 2330
+ HVFKL ++ Y F+A+ E S W+ V+N+A ++A
Sbjct: 91 KDHVFKLQFKN-HVYFFRAESEYTYSRWMEVINSATSSA 204
>32371
Length = 625
Score = 33.9 bits (76), Expect = 0.72, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1
Query: 195 NVNVHNFTTSWRDGLAFNAIVHKHR 219
+V++ + SWR+GLAF AI+H+ R
Sbjct: 625 SVDIKDLLVSWRNGLAFCAIIHRFR 551
>18202
Length = 424
Score = 32.7 bits (73), Expect = 1.7, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 132 HLENMG------SHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKEKKSAKDALLLW 185
H++N G + DI+DG+ + L ++W +IL + I I + + K LL W
Sbjct: 193 HMKNHGIKIVFSTQDIMDGDIKSLLDVMWLLILNYGIHFIG-NNSFQRSVGAGKKNLLDW 17
Query: 186 CQ 187
CQ
Sbjct: 16 CQ 11
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6679501|ref|NP_032973.1| protease (prosome,
macropain) 26S subunit, ATPase 1 [Mus musculus]
(440 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
23766 428 e-120
01642 337 e-106
07243 305 3e-83
19129 298 3e-81
07247 223 2e-67
02582 176 2e-44
03022 154 5e-38
12235 152 3e-37
00810 112 3e-25
20270 110 2e-24
38672 85 3e-23
25671 83 3e-16
02194 75 4e-14
26408 75 5e-14
26887 73 3e-13
17843 58 9e-09
06766 44 1e-04
14413 44 1e-04
01102 40 0.003
01279 36 0.035
29846 36 0.036
27434 33 0.15
13641 33 0.19
30736 32 0.74
37695 31 0.88
19561 30 2.1
38684 29 3.2
02151 28 5.3
>23766
Length = 1463
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/226 (91%), Positives = 217/226 (96%)
Frame = +1
Query: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
G + PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA
Sbjct: 142 GNQAPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 321
Query: 275 EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
EEHAPSIVFIDEIDA+GTKRY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI
Sbjct: 322 EEHAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 501
Query: 335 ETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGAD 394
ETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTSRMTLA DV +DD +M+KDDLSGAD
Sbjct: 502 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAGDVNIDDYVMSKDDLSGAD 681
Query: 395 IKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440
IKAICTEAGL+ALRERRMKV NEDF K+KENVLY+K EGTPEGLYL
Sbjct: 682 IKAICTEAGLLALRERRMKVRNEDFAKAKENVLYRKNEGTPEGLYL 819
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 169 PLVTVMK-VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGP 227
P+VTVMK EKAPQETYADIGGLD QIQEIKESVELPLTHPEYYEEMGIK K + G
Sbjct: 2 PMVTVMKGWEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKHQKVLSCMGL 181
Query: 228 PGTGKTLLAKAVANQTSATF 247
K K + + F
Sbjct: 182 QAQAKPCWPKLLPTRPRRLF 241
>01642
Length = 1406
Score = 337 bits (863), Expect(2) = e-106, Method: Compositional matrix adjust.
Identities = 152/257 (59%), Positives = 208/257 (80%)
Frame = -1
Query: 173 VMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
K+ ++P Y+DIGG+D Q QE++E+VELPLTH E Y+++GI PP+GV++YGPPG GK
Sbjct: 1031 CFKLMRSPT*XYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGK 852
Query: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
T+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI T
Sbjct: 851 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 672
Query: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
KR+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIE
Sbjct: 671 KRFDAQTGADREVQRILLELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIE 492
Query: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
FPLPD + K+ IF T +M ++++V L+D + D +SGADI AIC EAG+ A+RE R
Sbjct: 491 FPLPDRRQKRLIFSTITGKMNISEEVDLEDYVARPDKISGADINAICQEAGMQAVRENRY 312
Query: 413 KVTNEDFKKSKENVLYK 429
V +DF+K +N + K
Sbjct: 311 VVLAKDFEKGYKNNIKK 261
Score = 66.2 bits (160), Expect(2) = e-106, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 69/114 (60%)
Frame = -2
Query: 50 PLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSV 109
PL +K KL+R ++L ++EE+I++++ K L+++ + +V ++ P+ +
Sbjct: 1396 PLSLDVEDLYVKYKKLQRQLEFLEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIQSVPLVI 1223
Query: 110 GTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVL 163
G E +D N IV ++ GS +YV ILS +D++LL+P SV L+ +A++ VL
Sbjct: 1222 GQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSSSVALHKHSNALVDVL 1061
>07243
Length = 1112
Score = 305 bits (781), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/305 (48%), Positives = 206/305 (67%)
Frame = +1
Query: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
IV + G + V +DK L+ G V L+ ++ L + DPLV M E
Sbjct: 16 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 195
Query: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
TY+ IGGL QI+E++E +ELPL +PE + +GI PPKG +LYGPPGTGKTLLA+AVA+
Sbjct: 196 VTYSAIGGLTEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVAS 375
Query: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Q A FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ +
Sbjct: 376 QLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 555
Query: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
+REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE PLP+E+ +
Sbjct: 556 DREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR 735
Query: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
I +IH + ++ + ++ D+ +GAD++ +CTEAGL A+R R V EDF K
Sbjct: 736 LEILKIHALIIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMK 915
Query: 422 SKENV 426
+ V
Sbjct: 916 AVRKV 930
>19129
Length = 1020
Score = 298 bits (764), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 214/310 (69%), Gaps = 14/310 (4%)
Frame = +1
Query: 66 ERIKDYLLM---EEEFIRNQ--EQMKPLEEKQEEERSKVDDLR---------GTPMSVGT 111
E IK Y + E++ I N+ + ++ LE ++ E +KV LR G+ VG
Sbjct: 94 EGIKQYYISKIEEQQLIVNEKTQNLRRLEAQRNELNAKVRMLREELQLLQEQGS--YVGE 267
Query: 112 LEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLV 171
+ + +D +V + V I +D + + P C V L + + + +L + DPLV
Sbjct: 268 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDMNSVTPNCRVALRNDSYVLHKILPNKVDPLV 447
Query: 172 TVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTG 231
++M VEK P TY +GGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTG
Sbjct: 448 SLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 627
Query: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIG 291
KTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID+IG
Sbjct: 628 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 807
Query: 292 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
+ R + SGG+ E+QRTMLELLNQLDGF+ + ++KVIMATNRI+ LD AL+RPGRIDRKI
Sbjct: 808 SSRLEGGSGGDSEVQRTMLELLNQLDGFEPKQNIKVIMATNRIDILDSALLRPGRIDRKI 987
Query: 352 EFPLPDEKTK 361
EFP P+E+ +
Sbjct: 988 EFPPPNEEAR 1017
>07247
Length = 1753
Score = 223 bits (569), Expect(2) = 2e-67, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 147/204 (72%)
Frame = -2
Query: 228 PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 287
PGTGKTLLA+AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEI
Sbjct: 1407 PGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARLIREMFAFARDHEPCIIFMDEI 1228
Query: 288 DAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 347
DAIG +R+ + +REIQRT++ELLNQ+DGFD+ G VK+IMATNR +TLDPAL+RPGR+
Sbjct: 1227 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRL 1048
Query: 348 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
DRKIE LP+E+ + I +IH + + ++ + ++ +D +GAD++ +CTEAG+ A+
Sbjct: 1047 DRKIEISLPNEQARLEILKIHANPIAKHGEIDWEAVVKLSEDFNGADLRNVCTEAGMFAI 868
Query: 408 RERRMKVTNEDFKKSKENVLYKKQ 431
R R V EDF K+ V K+
Sbjct: 867 RAERDYVIEEDFMKAVRKVSDNKK 796
Score = 50.8 bits (120), Expect(2) = 2e-67, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = -1
Query: 163 LMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGV 222
+ DPLV M VE T+ IGGL Q++E++E +ELPL +PE ++ +GI K
Sbjct: 1600 WISGMDPLVYNMSVEDPGDITFNQIGGLGEQVRELREVIELPLLNPELFQRVGITRLKAA 1421
Query: 223 ILYGP 227
P
Sbjct: 1420 CCSDP 1406
>02582
Length = 1101
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 149/268 (55%), Gaps = 33/268 (12%)
Frame = +3
Query: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
+ DIGGLD +I+++VE PL +P+ ++ +G+ KGV+LYGPPG GKT LA+A A
Sbjct: 138 WTDIGGLDLVKLQIRQAVEWPLLYPDTFQALGLPLTKGVLLYGPPGCGKTTLAQAAATAC 317
Query: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
TFL + ++L Y+GD K + E F+ A APSI+F+DE+DAI KR DS+ G
Sbjct: 318 HVTFLSLSCAQLYSPYVGDAEKKISETFQKARALAPSILFLDEMDAIVGKRSDSSLGSGV 497
Query: 304 EIQRTMLELLNQLDGFDSRGD--------------------------------VKVIMAT 331
+R + LLN++DG R D V V+ AT
Sbjct: 498 S-ERVLSALLNEMDGIGVRLDDKSDSREMEIEGSSDHTPQVRQHAVKEAHDRHVLVVAAT 674
Query: 332 NRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLS 391
NR + LDPAL+RPGR+DR I P PD + + + F IHT +M L DV + L +
Sbjct: 675 NRPDMLDPALLRPGRMDRLIYVPPPDVQGRLQSFTIHTRKMPLGKDVDVKQLADLTAGYT 854
Query: 392 GADIKAICTEAGLMALRER-RMKVTNED 418
GADIK +C E GL+AL+E + N+D
Sbjct: 855 GADIKTLCNEVGLLALKESMSAECVNQD 938
>03022
Length = 2255
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 130/232 (56%), Gaps = 2/232 (0%)
Frame = +2
Query: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
P T+ D+G L N ++K+S+ + PE G+ G+IL GPPG GKTL+AKA+
Sbjct: 1412 PTTTWEDVGALSNVRAQLKDSILCRIHDPEVSSAFGLPTNSGIILVGPPGCGKTLVAKAM 1591
Query: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299
AN+ F+ + G EL+ KY+G+ + +RE F A+ AP ++F DE+D + + R N+
Sbjct: 1592 ANEAGLNFIYIKGPELLDKYVGESERNLREKFDKAQACAPCLIFFDEMDTLCSNR--QNN 1765
Query: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
G + +LL +DG R V V+ ATN IE +DPAL RPGR DRKI LPD
Sbjct: 1766 DGSNVGKSVTNQLLALMDGCGERSQVYVMGATNIIENVDPALQRPGRFDRKIFIGLPDTD 1945
Query: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKD--DLSGADIKAICTEAGLMALRE 409
+ I + T + + D +A+D SGAD+K + EA +AL+E
Sbjct: 1946 GRLDILRALTKGGSQRKLESCDMQQLAQDTEGFSGADLKHLVNEASTIALKE 2101
Score = 58.9 bits (141), Expect(2) = 2e-14, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +1
Query: 180 PQETYADIGGLDNQIQEIKESVE--LPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAK 237
P T D GG + + E+ E L + +Y K + +LYGP G+GK LA+
Sbjct: 514 PTATLDDFGGSNKLLAELDSDFEEILYSDYCQYASACDQKACRRYLLYGPRGSGKRFLAE 693
Query: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
+A Q L+ + LI GD + VR+LF A AP ++++++I+ + ++
Sbjct: 694 CIAGQLKLPLLKPKINTLISGVSGDSEQRVRDLFDQAVSQAPCVLYLEDIECLAPRQ 864
Score = 37.7 bits (86), Expect(2) = 2e-14, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +2
Query: 300 GGEREIQ-RTMLELLNQLDGFDSRG-DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
GG +++ R + EL + +D + +V V+ T+RIE + L PGR K +PD
Sbjct: 875 GGSKDMMTRIVSELGSCIDELQEKPENVVVVATTSRIEAVHRDLRIPGRFMEK-ALGMPD 1051
Query: 358 EKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
E +++ + Q SR TL+ + L L D++A+ A A R R
Sbjct: 1052EGSREGLLQRLCSRYTLSPHLKLKTLARLTPGFVAGDLRALVHGAFSTAFRRVR 1213
>12235
Length = 1749
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Frame = +1
Query: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
+ + F+ V GSE ++ ++G GP VR++F A ++AP I+F+DEIDA+G KR N GG
Sbjct: 1 EANVPFITVSGSEFLEMFVGVGPSRVRDMFATARKNAPCILFVDEIDAVGRKRSGRNFGG 180
Query: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
+ E + T+ +LL ++DGF+++ V V+ ATNR++ LD AL+RPGR DR+I PLPD K +
Sbjct: 181 QSEQENTLNQLLVEMDGFNTQTGVVVLAATNRVDILDAALLRPGRFDRQIFVPLPDIKXR 360
Query: 362 KRIFQIHTSRMTLADDVTLDDLI--MAK--DDLSGADIKAICTEAGLMALRERRMKVTNE 417
IF++H L +V +DL MA SGADI +C EA L+A R+ +
Sbjct: 361 ASIFKVHLD--PLKTEVNKNDLARKMAALTPGFSGADIANVCNEAALIAARDLNTSIHMT 534
Query: 418 DFKKSKENVL 427
F+++ E V+
Sbjct: 535 HFEQAIERVV 564
>00810
Length = 1431
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 123/223 (55%), Gaps = 3/223 (1%)
Frame = -3
Query: 190 LDNQIQEIKESVELPLTHPEYYEEMGI-KPPKGVILYGPPGTGKTLLAKAVANQTSATFL 248
L++ IQ++KE+V LP + + + +PPKGV+L+GPPG GKT++AKA A A F+
Sbjct: 1429 LEDVIQDVKETVILPFKRADLFRHSSLLQPPKGVLLHGPPGCGKTMIAKATAKAAGARFI 1250
Query: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRT 308
+ S L+ K+ G+ K +F +A + P+I+FIDEID+ R ++ I+
Sbjct: 1249 NLQVSSLVDKWYGESQKRAEAVFSLAIKLQPTIIFIDEIDSFLRSRTSTDHEATAMIK-- 1076
Query: 309 MLELLNQLDGFDSRGDVKVIM--ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQ 366
+ ++ DG + D +V++ ATNR + +D A++R R+ LP ++ IF
Sbjct: 1075 -TQFMSFWDGLMTDPDCRVMVMGATNRPQDVDAAILR--RMPSMFHIGLPGPAQRRSIFN 905
Query: 367 IHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
+ S+ + D + D+L D SG+DI+ +C A + + E
Sbjct: 904 LILSKERI-DALNYDELAEMTDGFSGSDIREVCRAAAVATVHE 779
>20270
Length = 542
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 3/130 (2%)
Frame = -3
Query: 217 KPPKGVILYGPPGTGKTLLAKAVANQ-TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
KP +G++LYGPPGTGK+ LAKAVA + ++TF V S+L+ K+LG+ KLV+ LF++A
Sbjct: 387 KPWRGILLYGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGESEKLVKTLFQLAR 208
Query: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGF--DSRGDVKVIMATNR 333
E+ PSI+FIDE+DA+ R ++ S R I+ E L Q+ G D+ G V V+ ATN
Sbjct: 207 ENQPSIIFIDEVDALCGSRSENESESARRIK---TEFLVQMQGVGNDNTG-VLVLGATNI 40
Query: 334 IETLDPALIR 343
TLD A+ R
Sbjct: 39 PWTLDSAIRR 10
>38672
Length = 730
Score = 85.1 bits (209), Expect(2) = 3e-23, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 66/110 (60%)
Frame = -3
Query: 301 GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
GE E +R + +LL +DG R V V+ ATNR ++D AL R GR DR+++ +PD
Sbjct: 599 GEVE-RRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDAALRRFGRFDREVDIGIPDATG 423
Query: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
+ I +IHT M LADDV L+ + GAD+ A+C+EA L +RE+
Sbjct: 422 RLEILRIHTKNMKLADDVDLEQVASETHGHVGADVAALCSEAALQQIREK 273
Score = 41.2 bits (95), Expect(2) = 3e-23, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -1
Query: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
++ K G+ +R+ F AE++AP+I+FIDE+DAI KR
Sbjct: 730 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR 611
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Frame = -3
Query: 160 IGVLMDD-------TDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYE 212
+ V MDD ++P + P ++ D+GGL+N +E++E V+ P+ HPE +
Sbjct: 218 LAVTMDDFRWALGKSNPSALRETCVEVPNVSWEDVGGLENVKKELQELVQYPVEHPEKFL 39
Query: 213 EMGIKPPKGVIL 224
+ G+ P KGV+
Sbjct: 38 KFGMTPSKGVLF 3
>25671
Length = 441
Score = 82.8 bits (203), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Frame = +2
Query: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA 289
TGKT+LAKAVA + TF V S L KY G+ KLVR LF +A +APS +FIDEID+
Sbjct: 2 TGKTMLAKAVATECGTTFFNVSTSSLANKYRGESEKLVRLLFEMAHFYAPSTIFIDEIDS 181
Query: 290 IGTKR-YDSNSGGEREIQRTMLELLNQLDGFDSRGD-----VKVIMATN 332
I +KR DS R ++ ELL Q+DG D V V+ ATN
Sbjct: 182 ICSKRGSDSEHEASRRVKS---ELLVQMDGVGVTNDDPSKAVMVLAATN 319
>02194
Length = 1891
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Frame = -1
Query: 206 THPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPK 265
T P +Y + GI +G +LYGPPG GK+ A+A A + L +K L D
Sbjct: 1537 TAPRWYMDRGIPYRRGYLLYGPPGCGKSSYIMALAG---ALDYNICVLNLSEKGLSD--D 1373
Query: 266 LVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS--NSGGEREIQR-TMLELLNQLDGFDSR 322
+ L VA E SI+ ++++DA R S N + + R T LLN LDG S
Sbjct: 1372 RLNHLLTVAPEQ--SIILLEDVDAAFLSRDLSKENPAMYQGMGRLTFSGLLNALDGVASA 1199
Query: 323 GDVKVIMATNRIETLDPALIRPGRIDRK 350
V M TN ++ LDPALIRPGR+D K
Sbjct: 1198 EARIVFMTTNYLDRLDPALIRPGRVDMK 1115
>26408
Length = 463
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +1
Query: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Q IKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T
Sbjct: 292 QRIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 438
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Frame = +2
Query: 134 SILSFVDKDL----LEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGG 189
S LS +DK++ + P C V L ++ + + +L + DPLV++M VEK P TY +GG
Sbjct: 98 SSLSILDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 277
Query: 190 LDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 249
LD QI+E + P + P + + P K L + TF+R
Sbjct: 278 LDKQIKESRR*SNCPSSIPNCSMPWALLSQRVYCCTVRPVLAKRCLPVRLPITPECTFIR 457
Query: 250 V 250
V
Sbjct: 458 V 460
>26887
Length = 410
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = -3
Query: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 331
RY+SNSGGEREIQRTMLELLNQLDGFDSRGDVKV + T
Sbjct: 168 RYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVHLXT 55
>17843
Length = 772
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Frame = +1
Query: 216 IKPPKGVILYGPPGTGKTLLAKAVANQ---------TSATFLRVVGSELIQKYLGDGPKL 266
I + ++L+GPPGTGKT L KA+A++ + + + L K+ + KL
Sbjct: 175 ISWNRVILLHGPPGTGKTTLCKALAHKLCIRLSHRFSCGQLVEINSHSLFSKWFSESGKL 354
Query: 267 VRELFRVAEEHA--PSI---VFIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLDGFD 320
V ++F+ ++ P + V IDE++++ R +G E + R + +L Q+D
Sbjct: 355 VTKMFQRLHDYMVDPELLVCVLIDEVESLTAARKSCLNGNEPSDAIRVVNAVLTQIDQLK 534
Query: 321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
+ ++ +N +D A + I + I P P
Sbjct: 535 KFANCLILTTSNITGAIDLAFVDRADIKQYIGPPTP 642
>06766
Length = 976
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLM 405
R+D+ I PLPD+K+++ I + + + LA +V L + SGAD+ IC A +
Sbjct: 2 RLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKL 181
Query: 406 ALRE 409
A+R+
Sbjct: 182 AIRQ 193
>14413
Length = 826
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Frame = +2
Query: 232 KTLLAKAVA------NQTSATFLRVV---GSELIQKYLGDGPKLVRELFRVAEEHAPS-- 280
KT L KA+A Q S + +V L K+ + KLV LF E A
Sbjct: 2 KTSLCKALAEKLAIRTQNSFAYTHLVEINSHSLFSKWFSESGKLVARLFGKIGELATDKN 181
Query: 281 ---IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETL 337
V IDE++++ R +S R+ R + +L QLD + +V ++ +N +++
Sbjct: 182 NLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDEIKACPNVLILATSNLAQSI 361
Query: 338 DPALIRPGRIDRKIEFPLP 356
D A + I + I P P
Sbjct: 362 DLAFLDRADIRQFIGLPDP 418
>01102
Length = 1074
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 421 KSKENVLYKKQEGTPEGLYL 440
K+KENVLY+K EGTPEGLYL
Sbjct: 64 KAKENVLYRKNEGTPEGLYL 123
>01279
Length = 2183
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -3
Query: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 255
+ V+L GPPGTGKT +A A+A + F +VGSE+
Sbjct: 1914 RAVLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEV 1801
>29846
Length = 451
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 351 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
I +P +++IF ++ LA D+ LD L GADIKA+C A
Sbjct: 142 ILISVPTSIQRRQIFNFCLRKLPLASDLDLDWLSSVTAGYVGADIKAVCASA 297
>27434
Length = 472
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Frame = +2
Query: 220 KGVILY--GPPGTGKTLLAKAVANQTSATFLRVVGSELI---------QKYLGDGPKLVR 268
KG IL GPPG GKT + +++A F R+ + + Y+G P +
Sbjct: 158 KGPILCFVGPPGVGKTSIGRSIATTLGREFHRIALGGVCDQSDIRGHRRTYIGSMPGRII 337
Query: 269 ELFRVAEEHAPSIVFIDEIDAIGT 292
+ + A + P + +DEID + T
Sbjct: 338 QGLKSAGTNNP-VFPLDEIDKLST 406
>13641
Length = 2081
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Frame = +2
Query: 45 AASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEER-------S 97
AA K+ L+TPHTQ LK L+ +K Y++ FI++ P EK +E R +
Sbjct: 827 AAGKVCLLTPHTQA-LKFLRTYELKPYVI----FIKS-----PTLEKLKESRMPARARAT 976
Query: 98 KVDDLRGTPMSVGTLEEIIDDN 119
+ D +R P S+ LEE+ + +
Sbjct: 977 EADSIR--PFSIEELEEMAETS 1036
>30736
Length = 520
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 217 KPPKGVILYGPPGTGKTLLAKAVANQTSATFLRV 250
+PP + + GPP +GKT L +AN+ A L+V
Sbjct: 129 RPPCKLAVLGPPLSGKTTLCHLLANKYGAKVLKV 28
>37695
Length = 156
Score = 31.2 bits (69), Expect = 0.88, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 399 CTEAGLMALRERRMKVTNEDFKKSKEN 425
CTEAG+ A+R RR T +DF + N
Sbjct: 9 CTEAGMFAIRARRKMATEKDFLDAVNN 89
>19561
Length = 474
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Frame = -1
Query: 220 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE--LIQKYLGDGPKLVRELFRVAEEH 277
K +L GPPG GKT LA VA + + S+ ++ + + + +
Sbjct: 378 KVALLCGPPGLGKTTLAHIVAKHAGYNVVEMNASDDRSVEVFSNKIEAATQMRAVMGADP 199
Query: 278 APSIVFIDEIDAIGT----------KRYDSNSGGERE 304
P+ + IDEID KR ++ +GG+++
Sbjct: 198 RPNCLIIDEIDGAPQAAVNVLLNILKRPEAGAGGKKK 88
>38684
Length = 464
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 212 EEMGIKPPKGVILYGPPGTGKT-LLAKA 238
E G PP I+YGP GTGKT LA+A
Sbjct: 327 ERTGYTPP--FIMYGPFGTGKTETLAQA 404
>02151
Length = 1751
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Frame = +3
Query: 143 LLEPGCSVLLNH---------KVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQ 193
LL P +++NH K A + ++ D L M ++ +IGGLDN+
Sbjct: 966 LLSPPDPIVINHVITLDGPDAKKTACYDIDVEVDDTLKQQMNSFLLSAQSQQEIGGLDNK 1145
Query: 194 IQEIKESVELPLTHPEYYEEMGIKP 218
I E E++ T+ E++ P
Sbjct: 1146 IHETVETINQLKTNREFFLSFARDP 1220
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6753490|ref|NP_036131.1| COP9 signalosome subunit 4
[Mus musculus]
(406 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
32094 244 e-120
18761 28 8.2
>32094
Length = 820
Score = 244 bits (624), Expect(3) = e-120, Method: Compositional matrix adjust.
Identities = 113/144 (78%), Positives = 128/144 (88%)
Frame = +3
Query: 258 LAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYN 317
L+ +G KMYLDRIIR + LQEF ML+PHQKA TADGS+I+DRAVIEHNLLSASKLYN
Sbjct: 375 LSYFG---KMYLDRIIRSSDLQEFEGMLLPHQKAITADGSTIVDRAVIEHNLLSASKLYN 545
Query: 318 NITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSL 377
NI+F ELGALLEIP AKAEKIASQMITEGRMNG++DQID IVHFE RE LP WD+QIQSL
Sbjct: 546 NISFTELGALLEIPPAKAEKIASQMITEGRMNGYVDQIDSIVHFEARETLPMWDRQIQSL 725
Query: 378 CFQVNNLLEKISQTAPEWTAQAME 401
CFQVNN++EKISQT+P+W A+AME
Sbjct: 726 CFQVNNIIEKISQTSPDWFAKAME 797
Score = 155 bits (391), Expect(3) = e-120, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 83/94 (88%)
Frame = +2
Query: 137 KQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLD 196
KQY+ DYKLETYLKIARLYLEDDD VQAEA+INRAS+LQ ++ NE+LQIHYK CYARVLD
Sbjct: 2 KQYSTDYKLETYLKIARLYLEDDDAVQAEAFINRASILQADTKNEELQIHYKACYARVLD 181
Query: 197 YRRKFIEAAQRYNELSYKTIVHESERLEALKHAL 230
+RRKFIEAAQRYNELSYKTI+ E ERL +K L
Sbjct: 182 FRRKFIEAAQRYNELSYKTIIAEEERLNCIKKML 283
Score = 73.2 bits (178), Expect(3) = e-120, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +1
Query: 227 KHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEK 266
K+AL CTILASAGQQRSRMLATLFKDERCQQL+A+ ILEK
Sbjct: 274 KNALICTILASAGQQRSRMLATLFKDERCQQLSAFHILEK 393
>18761
Length = 492
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 360 HFETREALPTWDKQIQSLCFQVNNLLEKISQTAP 393
H E E + + ++ L QVN LLE IS AP
Sbjct: 266 HEEVAEEVSVCAQDVEGLAAQVNELLEAISLLAP 165
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|94407812|ref|XP_908729.2| PREDICTED: similar to
Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial actin-binding
protein) (Actin-binding protein 280) (ABP-280) (Nonmuscle filamin)
isoform 10 [Mus musculus]
(2588 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13043 430 e-120
16231 260 1e-89
17351 253 8e-67
29446 204 4e-52
19277 178 1e-49
21436 153 1e-36
19002 102 2e-21
27230 69 6e-17
05081 75 3e-13
19147 61 6e-09
19154 59 2e-08
09100 57 8e-08
29755 56 2e-07
35059 55 5e-07
09711 54 7e-07
17613 54 7e-07
04951 42 0.004
18202 40 0.012
32088 37 0.13
11866 32 3.0
02928 32 3.6
31031 32 4.5
20490 32 4.8
30961 31 5.6
37715 30 8.9
>13043
Length = 1574
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/521 (45%), Positives = 308/521 (59%), Gaps = 21/521 (4%)
Frame = +3
Query: 1368 PSEAKMSCMDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVHDVTDASKVKCS 1427
P EAKM C DN+DG+C VEY P + G Y ++V +G + SPF V + + DASKVKC
Sbjct: 36 PVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKVKCY 215
Query: 1428 GPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGP-KGLVEPVDVVDNADGTQTVNYVP 1486
GPGL V ANLP F VD AG APL V P G + ++V +G Y+P
Sbjct: 216 GPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMP 395
Query: 1487 SREGSYSISVLYGEEEVPRSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAK 1546
EG + V YG + VP SPF ++VLP D SKVK SGPG+ + VPASLP +FT+D +
Sbjct: 396 RAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRS-VPASLPAQFTVDTR 572
Query: 1547 DAGEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAYVPDVPGRYTILIKYGGDEIPFSPYR 1606
DAG L + P+G K + Q+N DGTY V Y P+ G Y I++KY G ++P SP+
Sbjct: 573 DAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFN 752
Query: 1607 VRAVPTGDASKCTVTVSIXXXXXXXXXXPTIQIGEETVITVDTKAAGKGKVTCTVCTPDG 1666
V A P GDAS+C +T I I +ETVITVD AGKG VTC + +P G
Sbjct: 753 VEATPLGDASQCRIT---------DGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSG 905
Query: 1667 SXXXXXXXXXXXGTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQV-TIPERP-------- 1717
S GTF I + G+Y+I ++FGG VP+ + +PE
Sbjct: 906 SDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYLQSR 1085
Query: 1718 ----MVGVNGLDVTS-------LRPFDLVIPFTIKKGEITGEVRMPSGKVAQPSITDNKD 1766
++ + +D + +P D P ++ V MPSGK + P I DN+D
Sbjct: 1086 VVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSGKTSYPKIEDNRD 1265
Query: 1767 GTVTVRYSPSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHITAYGPGLTHGVVNKPAT 1826
GTVTVRY P+E GLHE+ ++Y+N I GSP F+VD VN G++TAYGPGL+HGVV +PA
Sbjct: 1266 GTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVDSVNSGYVTAYGPGLSHGVVYEPAV 1445
Query: 1827 FTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLP 1867
FT+NTK+AG GGL+LA+EGPSK EI C DNQDGTC+VSYLP
Sbjct: 1446 FTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLP 1568
Score = 271 bits (693), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 273/538 (50%), Gaps = 15/538 (2%)
Frame = +3
Query: 580 GTLGFSVEGPSQAKIECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREA 639
G LG +EGP +AK++CDD DG+C V Y+P + G+Y + VL + I+ SPF I+
Sbjct: 9 GGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQN- 185
Query: 640 PQDFHPDRVKARGPGLEKTGVAVNKPAEFTVDAKHAGKAPLRVQVQDN-EGCSVEATVKD 698
P D +VK GPGL+ + VA N PA FTVDA+ AG+APL V D G EA +
Sbjct: 186 PVDAS--KVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVP 359
Query: 699 NGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLK 758
G Y +Y+PR K V +GG +PNSPF + V G P+KVKV GPGV ++ +
Sbjct: 360 VEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRS-VP 536
Query: 759 AHEPTYFTVDCTEAGQGDVSIGIKCAPGVVGPTEAXXXXXXXXXXXXTFTVKYTPCGAGS 818
A P FTVD +AG D ++C V P + T+ V YTP G
Sbjct: 537 ASLPAQFTVDTRDAGVAD----LECM--VQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGV 698
Query: 819 YTIMVLFADQATPTSPIRVKVEPSHDASKVKAEGPGLNRTGVELGKPTHFTVNAKTAGKG 878
Y I+V + Q P SP V+ P DAS+ + G R + + K T TV+A AGKG
Sbjct: 699 YDIIVKYDGQDVPRSPFNVEATPLGDASQCRITD-GAERV-IPIEKETVITVDAADAGKG 872
Query: 879 KLDVQFSGLAKGDAVRDVDIIDHHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGV 938
+ + + D D+DI+D D T+T+ +IP G + + +GG+ +P ++
Sbjct: 873 SVTCRIRSPSGSDI--DIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEA 1046
Query: 939 SPSLDLSKIKVSGLGDKVDVGKDQEFTVKSKGAGGQ-------------GKVASKIVSPS 985
P + K S + D + V + + G+G V++ ++ PS
Sbjct: 1047 VPEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPS 1226
Query: 986 GAAVPCKVEPGLGADNSV-VRFVPREEGPYEVEVTYDGVPVPGSPFPLEAVAPTKPSKVK 1044
G K+E D +V VR+ P E G +E+ V Y+ + GSPF V V
Sbjct: 1227 GKTSYPKIEDN--RDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFH-VDSVNSGYVT 1397
Query: 1045 AFGPGLQGGNAGSPARFTIDTKXXXXXXXXXXVEGPCEAQLECLDNGDGTCSVSYVPT 1102
A+GPGL G PA FTI+TK VEGP + +++C+DN DGTC+VSY+P+
Sbjct: 1398 AYGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLPS 1571
Score = 228 bits (581), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 250/535 (46%), Gaps = 26/535 (4%)
Frame = +3
Query: 1077 VEGPCEAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVAPCFDASKV 1136
+EGP EA+++C DN DGTC V Y PT+PG Y+I++LF D I SPF + DASKV
Sbjct: 27 IEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKV 206
Query: 1137 KCSGPGLE--RATAGEVGQFQVDCSSAGSAELTIEICSE-AGLPAEVYIQDHGDGTHTIT 1193
KC GPGL+ A F VD AG A L + +G E I +G + T
Sbjct: 207 KCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQAT 386
Query: 1194 YIPLCPGAYTVTIKYGGQPVPNFPSKLQVEPAVDTSGVQCYGPGIEGQGVFREATTEFSV 1253
Y+P G V +KYGG+PVPN P +QV P VD S V+ GPG+ + V +F+V
Sbjct: 387 YMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVR-RSVPASLPAQFTV 563
Query: 1254 DARALTQTGGPHVKARVANPSGNLTDTYVQDCGDGTYKVEYTPYEEGVHSVDVTYDGXXX 1313
D R G ++ V P G+ Y Q+ DGTY V YTP + GV+ + V YDG
Sbjct: 564 DTR---DAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDV 734
Query: 1314 XXXXXXXXXTEGCDPSRVRVHGPGIQSGTTNKPNKFTXXXXXXXXXXXXXXXXXP--SEA 1371
T D S+ R+ + K T P S+
Sbjct: 735 PRSPFNVEATPLGDASQCRITDGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDI 914
Query: 1372 KMSCMDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPF---KVP------------VH 1416
+ +D DG+ ++ +IP AG Y + + +GG+ VP + VP V
Sbjct: 915 DIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYLQSRVVD 1094
Query: 1417 DVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPL----QVKVQGPKGLVEPVDV 1472
D+ A +V G+ + P FQ V P+ V P G +
Sbjct: 1095 DLIVADQVDQVNAAPGSGLYQ---PVDFQFP-----VGPIFNFVSASVIMPSGKTSYPKI 1250
Query: 1473 VDNADGTQTVNYVPSREGSYSISVLYGEEEVPRSPFKVKVLPTHDASKVKASGPGLNTTG 1532
DN DGT TV Y P+ G + + V Y E + SPF V + ++ V A GPGL + G
Sbjct: 1251 EDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHV-DSVNSGYVTAYGPGL-SHG 1424
Query: 1533 VPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQ--DNHDGTYTVAYVPDV 1585
V P FTI+ K+AG G LA+ + EG P KT I+ DN DGT V+Y+P V
Sbjct: 1425 V-VYEPAVFTINTKEAGAGGLALAV---EG-PSKTEIKCVDNQDGTCNVSYLPSV 1574
Score = 215 bits (547), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 159/513 (30%), Positives = 246/513 (47%), Gaps = 30/513 (5%)
Frame = +3
Query: 1757 AQPSITDNKDGTVTVRYSPSEAGLHEMDIRYDNMHIPGSPLQFYV-DYVNCGHITAYGPG 1815
A+ DN+DGT V Y P++ G +++ + + + I SP + + V+ + YGPG
Sbjct: 45 AKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKVKCYGPG 224
Query: 1816 LTHGVV--NKPATFTVNTKDAGEGGLSLAIEGP---SKAEISCTDNQDGTCSVSYLPVLP 1870
L V N PA FTV+ +DAGE L + P ++ E ++G +Y+P
Sbjct: 225 LDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAE 404
Query: 1871 GDYSILVKYNDQHIPGSPFTARVT-GDDSMRMSHLKVGSAADIP--------INISETDL 1921
G + VKY + +P SPF +V G D ++ G +P ++ + +
Sbjct: 405 GKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRSVPASLPAQFTVDTRDAGV 584
Query: 1922 SLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVIS 1981
+ L V P G + +G + + P++ G + + VK +GQ V SP V
Sbjct: 585 ADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFNV--E 758
Query: 1982 QSEIGDASRVRVSGQGLHEGHTFEPAEFI-IDTRDAGYGGLSLSIEGPS--KVDINTEDL 2038
+ +GDAS+ R++ G E I +D DAG G ++ I PS +DI+ D
Sbjct: 759 ATPLGDASQCRIT-DGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQ 935
Query: 2039 EDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITRR---------- 2088
DGT +++ P G YII IKF VP ++ + E ++ + R
Sbjct: 936 GDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYLQSRVVDDLIVADQ 1115
Query: 2089 -RRAPSVANIGSHCDLSLKIPEISIQD-MTAQVTSPSGKTHEAEIVEGENHTYCIRFVPA 2146
+ + G + + + P I + ++A V PSGKT +I + + T +R+ P
Sbjct: 1116 VDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSGKTSYPKIEDNRDGTVTVRYQPT 1295
Query: 2147 EMGMHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFGIWTRE 2206
E G+H + VKY + + GSPF F V + G V A GPGL PA F I T+E
Sbjct: 1296 ETGLHELHVKYNNECIQGSPFFFHVDSVNSG---YVTAYGPGLSHGVVYEPAVFTINTKE 1466
Query: 2207 AGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYV 2239
AGAGGLA+AVEGPSK EI D +DG+C V+Y+
Sbjct: 1467 AGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYL 1565
Score = 203 bits (517), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 163/541 (30%), Positives = 248/541 (45%), Gaps = 39/541 (7%)
Frame = +3
Query: 1549 GEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAYVPDVPGRYTILIKYGGDEIPFSPYRVR 1608
G+G L + I P K DN DGT V Y P PG+Y I + +G I SP+ V+
Sbjct: 3 GKGGLGLGIEGP--VEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVK 176
Query: 1609 AVPTGDASKCTVTVSIXXXXXXXXXXPTIQIGEETVITVDTKAAGKGKVTCTVCTP-DGS 1667
DASK P V TVD + AG+ + T P G+
Sbjct: 177 IQNPVDASKVKCYGPGLDASEVAANLPA-------VFTVDARDAGEAPLDVTFTDPLSGA 335
Query: 1668 XXXXXXXXXXXGTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTI-----PERPMVGVN 1722
G + Y GK + V++GG+ VPNSPF + + P + V V+
Sbjct: 336 QQEAEIVPVEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSK--VKVS 509
Query: 1723 GLDVTSLRPFDLVIPFTIKK-----GEITGEVRMPSGKVAQPSITDNKDGTVTVRYSPSE 1777
G V P L FT+ ++ V+ P G +P +N+DGT V Y+P +
Sbjct: 510 GPGVRRSVPASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPED 689
Query: 1778 AGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHITAYGPGLTHGV-----VNKPATFTVNTK 1832
G++++ ++YD +P SP F V+ G + +T G + K TV+
Sbjct: 690 LGVYDIIVKYDGQDVPRSP--FNVEATPLGDASQCR--ITDGAERVIPIEKETVITVDAA 857
Query: 1833 DAGEGGLSLAIEGPSKAEISC--TDNQDGTCSVSYLPVLPGDYSILVKYNDQHIPGSPFT 1890
DAG+G ++ I PS ++I D DGT ++S++P G+Y I +K+ +P +T
Sbjct: 858 DAGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYT 1037
Query: 1891 A--------------RVTGD----DSMRMSHLKVGSAADIPINISET---DLSLLTATVV 1929
A RV D D + + GS P++ + ++A+V+
Sbjct: 1038 AEAVPEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVI 1217
Query: 1930 PPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDAS 1989
PSG+ ++ R+G V + + P ETG H +HVK N + + SP + G
Sbjct: 1218 MPSGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVDSVNSG--- 1388
Query: 1990 RVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCRVTYCP 2049
V G GL G +EPA F I+T++AG GGL+L++EGPSK +I D +DGTC V+Y P
Sbjct: 1389 YVTAYGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLP 1568
Query: 2050 T 2050
+
Sbjct: 1569 S 1571
Score = 182 bits (461), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 236/516 (45%), Gaps = 29/516 (5%)
Frame = +3
Query: 1944 RNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHT 2003
R+G + + P + G++ + V + + SP V I Q+ + DAS+V+ G GL
Sbjct: 69 RDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKI-QNPV-DASKVKCYGPGLDASEV 242
Query: 2004 FE--PAEFIIDTRDAGYGGLSLSIEGP---SKVDINTEDLEDGTCRVTYCPTEPGNYIIN 2058
PA F +D RDAG L ++ P ++ + +E+G + TY P G ++
Sbjct: 243 AANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAEGKCKVD 422
Query: 2059 IKFADQHVPGSPFSVKV---TGEGRVKESITRRRRAPSVANIGSHCDLSLKIPEISIQDM 2115
+K+ + VP SPF ++V +VK S RR+ + ++ + + D+
Sbjct: 423 VKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRSVPAS---LPAQFTVDTRDAGVADL 593
Query: 2116 TAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQFTVGPLG 2175
V P G + E+ TY + + P ++G++ + VKY GQ VP SPF PLG
Sbjct: 594 ECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFNVEATPLG 773
Query: 2176 EGGAHKVRAGGPGLERAEAGVPAE----FGIWTREAGAGGLAIAVEGPSKAEISFE--DR 2229
+ ++ G AE +P E + +AG G + + PS ++I + D+
Sbjct: 774 DASQCRITDG------AERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQ 935
Query: 2230 KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASPSGDARRLTVSSLQES----- 2284
DG+ ++++ Q G+Y + +KF +PD + A P + + S + +
Sbjct: 936 GDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAE-AVPEDEYEKYLQSRVVDDLIVAD 1112
Query: 2285 ---------GLKVNQPASFAVSLNGAKGAIDAKVHSPSGALEECYVTEIDQDKYAVRFIP 2335
G + QP F + + A V PSG + + VR+ P
Sbjct: 1113 QVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSGKTSYPKIEDNRDGTVTVRYQP 1292
Query: 2336 RENGIYLIDVKFNGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAGLEGGVTGSPAEFIVNT 2395
E G++ + VK+N I GSPF V + G V+AYG GL GV PA F +NT
Sbjct: 1293 TETGLHELHVKYNNECIQGSPFFFHV----DSVNSGYVTAYGPGLSHGVVYEPAVFTINT 1460
Query: 2396 SNAGAGALSVTIDGPSKVKMDCQECPEGY-RVTYTP 2430
AGAG L++ ++GPSK ++ C + +G V+Y P
Sbjct: 1461 KEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLP 1568
Score = 171 bits (433), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 240/541 (44%), Gaps = 17/541 (3%)
Frame = +3
Query: 773 GQGDVSIGIKCAPGVVGPTEAXXXXXXXXXXXXTFTVKYTPCGAGSYTIMVLFADQATPT 832
G+G + +GI+ GP EA T V+Y P G Y I VLF D+
Sbjct: 3 GKGGLGLGIE------GPVEAKMKCDDNRDG--TCRVEYYPTKPGKYDISVLFGDKPIKD 158
Query: 833 SPIRVKVEPSHDASKVKAEGPGLNRTGVELGKPTHFTVNAKTAGKGKLDVQFSGLAKGDA 892
SP VK++ DASKVK GPGL+ + V P FTV+A+ AG+ LDV F+ G A
Sbjct: 159 SPFSVKIQNPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSG-A 335
Query: 893 VRDVDIIDHHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGVSPSLDLSKIKVSGL 952
++ +I+ + Y Y+P +G V+V YGG +P SPF + V P +D SK+KVSG
Sbjct: 336 QQEAEIVPVEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGP 515
Query: 953 GDKVDVGKD--QEFTVKSKGAGGQGKVASKIVSPSGAAVPCKVEPGLGADNSVVRFVPRE 1010
G + V +FTV ++ A G + + P G+ + + V+ + P +
Sbjct: 516 GVRRSVPASLPAQFTVDTRDA-GVADLECMVQRPDGSFIKPYFQNNEDGTYDVI-YTPED 689
Query: 1011 EGPYEVEVTYDGVPVPGSPFPLEAVAPTKPSKVKAFGPGLQGGNAGSPARFTIDTKXXXX 1070
G Y++ V YDG VP SPF +EA S+ + + T+D
Sbjct: 690 LGVYDIIVKYDGQDVPRSPFNVEATPLGDASQCRITDGAERVIPIEKETVITVDAADAGK 869
Query: 1071 XXXXXXVEGP--CEAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVA 1128
+ P + ++ +D GDGT ++S++P G+Y I I F +P + A
Sbjct: 870 GSVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAV 1049
Query: 1129 PCFDASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIE-------------ICSEAG 1175
P + K S + A +V Q S + + + +G
Sbjct: 1050 PEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSG 1229
Query: 1176 LPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQVEPAVDTSGVQCYG 1235
+ I+D+ DGT T+ Y P G + + +KY + + P V+ +V++ V YG
Sbjct: 1230 KTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVD-SVNSGYVTAYG 1406
Query: 1236 PGIEGQGVFREATTEFSVDARALTQTGGPHVKARVANPSGNLTDTYVQDCGDGTYKVEYT 1295
PG+ V+ A F+++ + + G + V PS T+ D DGT V Y
Sbjct: 1407 PGLSHGVVYEPAV--FTINTK---EAGAGGLALAVEGPSK--TEIKCVDNQDGTCNVSYL 1565
Query: 1296 P 1296
P
Sbjct: 1566 P 1568
Score = 160 bits (404), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 237/520 (45%), Gaps = 35/520 (6%)
Frame = +3
Query: 1835 GEGGLSLAIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNDQHIPGSPFTARVT 1894
G+GGL L IEGP +A++ C DN+DGTC V Y P PG Y I V + D+ I SPF+ ++
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQ 182
Query: 1895 GD-DSMRMSHLKVG-----SAADIP----INISETDLSLLTATVVPP-SGREEPCLLKRL 1943
D+ ++ G AA++P ++ + + L T P SG ++ + +
Sbjct: 183 NPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPV 362
Query: 1944 RNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHT 2003
G +++P+ G+ V VK G+ V +SP + + D S+V+VSG G+
Sbjct: 363 EEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGV--DPSKVKVSGPGVRRSVP 536
Query: 2004 FE-PAEFIIDTRDAGYGGLSLSIEGP--SKVDINTEDLEDGTCRVTYCPTEPGNYIINIK 2060
PA+F +DTRDAG L ++ P S + ++ EDGT V Y P + G Y I +K
Sbjct: 537 ASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVK 716
Query: 2061 FADQHVPGSPFSVKVTGEGRVKE-SITRRRRAPSVANIGSHCDLSLKIPEISIQDMTAQV 2119
+ Q VP SPF+V+ T G + IT A V I +++ + +T ++
Sbjct: 717 YDGQDVPRSPFNVEATPLGDASQCRIT--DGAERVIPIEKETVITVDAADAGKGSVTCRI 890
Query: 2120 TSPSGKTHEAEIVEGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQFTVGPLGEGGA 2179
SPSG + +IV+ + T+ I F+P G + + +K+ G VP Q+T + E
Sbjct: 891 RSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDG--QYTAEAVPEDEY 1064
Query: 2180 HKV-------------------RAGGPGLERAEAGVPAEFGIWTREAGAGGLAIAVEGPS 2220
K A G GL + V +F + I G +
Sbjct: 1065 EKYLQSRVVDDLIVADQVDQVNAAPGSGLYQP---VDFQFPVGPIFNFVSASVIMPSGKT 1235
Query: 2221 KAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASPSGDARRLTVSS 2280
ED +DG+ V Y E G +E+ VK+N E I SPF V S ++ +T
Sbjct: 1236 SYP-KIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVDSV--NSGYVTAYG 1406
Query: 2281 LQESGLKVNQPASFAVSLNGA-KGAIDAKVHSPSGALEEC 2319
S V +PA F ++ A G + V PS +C
Sbjct: 1407 PGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKC 1526
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 238/516 (46%), Gaps = 18/516 (3%)
Frame = +3
Query: 285 GQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFE 344
G+G + + +E P EAK+ +++++ T V Y P G + ++VLF + I SPF
Sbjct: 3 GKGGLGLGIEGPV----EAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFS 170
Query: 345 VYVDKSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGMGEVEVVIQDPTG---QKG 401
V + ++ DASKV GPGL+ S AN F + AG ++V DP Q+
Sbjct: 171 VKI-QNPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEA 347
Query: 402 TVEPQLEARGDSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPAACRAIGR 461
+ P E Y+ +Y P EG V V + G P+P SP+ + V +P+ + G
Sbjct: 348 EIVPVEEG----LYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGP 515
Query: 462 GLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEE-RVKQKDLGDGVYGFEYYPTIP 520
G++ + V A F V T+ AG +L+ V+ P G + ++ DG Y Y P
Sbjct: 516 GVR-RSVPASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDL 692
Query: 521 GTYTVTITWGGQNIGRSPFEVKVGTECGNQKVRAWGPGLEGGI-VGKSADFVVEAIGDDV 579
G Y + + + GQ++ RSPF V+ T G+ G E I + K V+A
Sbjct: 693 GVYDIIVKYDGQDVPRSPFNVE-ATPLGDASQCRITDGAERVIPIEKETVITVDAADAGK 869
Query: 580 GTLGFSVEGPSQAKIECD--DKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIR 637
G++ + PS + I+ D D+GDG+ + + PQ AGEY + + + + A+
Sbjct: 870 GSVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAE-- 1043
Query: 638 EAPQDFHPDRVKAR-------GPGLEKTGVA----VNKPAEFTVDAKHAGKAPLRVQVQD 686
P+D + +++R +++ A + +P +F + V
Sbjct: 1044AVPEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNF-VSASVIM 1220
Query: 687 NEGCSVEATVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVK 746
G + ++DN +GT + Y P + H V + I SPF +V + + V
Sbjct: 1221PSGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVDS-VNSGYVT 1397
Query: 747 VYGPGVAKTGLKAHEPTYFTVDCTEAGQGDVSIGIK 782
YGPG++ + +EP FT++ EAG G +++ ++
Sbjct: 1398AYGPGLSHGVV--YEPAVFTINTKEAGAGGLALAVE 1499
Score = 150 bits (379), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 146/485 (30%), Positives = 219/485 (45%), Gaps = 26/485 (5%)
Frame = +3
Query: 252 LNPKKARAYGPGIEPTGNMVKKRAEFTVETRSAGQGEVLVYVEDP-AGHQEEAKVTANND 310
++ K + YGPG++ + A FTV+ R AG+ + V DP +G Q+EA++ +
Sbjct: 189 VDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEE 368
Query: 311 KNRTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFEVYVDKSQGDASKVTAQGPGLEPSGNI 370
+ Y+P G KV V + G+ + SPF + V D SKV GPG+ S
Sbjct: 369 G--LYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGV-DPSKVKVSGPGVRRSVP- 536
Query: 371 ANKTTYFEIFTAGAGMGEVEVVIQDPTGQKGTVEPQLEARGDSTYRCSYQPTMEGVHTVH 430
A+ F + T AG+ ++E ++Q P G ++P + D TY Y P GV+ +
Sbjct: 537 ASLPAQFTVDTRDAGVADLECMVQRPDGS--FIKPYFQNNEDGTYDVIYTPEDLGVYDII 710
Query: 431 VTFAGVPIPRSPYTVTVGQACNPAACRAIGRGLQPKGVRVKETADFKVYTKGAGSGELKV 490
V + G +PRSP+ V + + CR I G + + + +++ V AG G +
Sbjct: 711 VKYDGQDVPRSPFNVEATPLGDASQCR-ITDGAE-RVIPIEKETVITVDAADAGKGSVTC 884
Query: 491 TVKGPKGEE-RVKQKDLGDGVYGFEYYPTIPGTYTVTITWGGQNIGRSPFEVKVGTECGN 549
++ P G + + D GDG + + P G Y + I +GG + + + E
Sbjct: 885 RIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEY 1064
Query: 550 QKVRAWGPGLEGGIVGKSADFVVEA--------------IGDDVGTLGFSVEGP----SQ 591
+K ++ IV D V A +G + SV P S
Sbjct: 1065EK-YLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSGKTSY 1241
Query: 592 AKIECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREAPQDFHPDRVK-- 649
KIE D DG+ VRY P E G + +HV N+E I+ SPF FH D V
Sbjct: 1242PKIE--DNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFF---------FHVDSVNSG 1388
Query: 650 ---ARGPGLEKTGVAVNKPAEFTVDAKHAGKAPLRVQVQDNEGCS-VEATVKDNGNGTYS 705
A GPGL GV V +PA FT++ K AG L + V EG S E DN +GT +
Sbjct: 1389YVTAYGPGLSH-GV-VYEPAVFTINTKEAGAGGLALAV---EGPSKTEIKCVDNQDGTCN 1553
Query: 706 CSYVP 710
SY+P
Sbjct: 1554VSYLP 1568
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 222/530 (41%), Gaps = 22/530 (4%)
Frame = +3
Query: 484 GSGELKVTVKGPKGEERVKQKDLGDGVYGFEYYPTIPGTYTVTITWGGQNIGRSPFEVKV 543
G G L + ++GP E ++K D DG EYYPT PG Y +++ +G + I SPF VK+
Sbjct: 3 GKGGLGLGIEGPV-EAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKI 179
Query: 544 GTECGNQKVRAWGPGLEGGIVGKS--ADFVVEAIGDDVGTLGFSVEGP---SQAKIECDD 598
KV+ +GPGL+ V + A F V+A L + P +Q + E
Sbjct: 180 QNPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVP 359
Query: 599 KGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREAPQDFHPDRVKARGPGLEKT 658
+G Y P+ G+ V V + + SPF + P +VK GPG+ ++
Sbjct: 360 VEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPG---VDPSKVKVSGPGVRRS 530
Query: 659 GVAVNKPAEFTVDAKHAGKAPLRVQVQDNEGCSVEATVKDNGNGTYSCSYVPRKPVKHTA 718
V + PA+FTVD + AG A L VQ +G ++ ++N +GTY Y P +
Sbjct: 531 -VPASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDI 707
Query: 719 MVSWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLKAHEPTYFTVDCTEAGQGDVS 778
+V + G +P SPF V ++ ++ A+ + + T TVD +AG+G V+
Sbjct: 708 IVKYDGQDVPRSPFNVEATPLGDASQCRITDG--AERVIPIEKETVITVDAADAGKGSVT 881
Query: 779 IGIKCAPGVVGPTEAXXXXXXXXXXXXTFTVKYTPCGAGSYTIMVLFADQATPTSPIRVK 838
I+ P+ + TFT+ + P AG Y I + F P +
Sbjct: 882 CRIR------SPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAE 1043
Query: 839 VEPSHDASKVKAEGPGLNRTGVELGKPTHFTVNAKTAGKG---KLDVQF----------- 884
P + K +R +L G G +D QF
Sbjct: 1044AVPEDEYEKYLQ-----SRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSA 1208
Query: 885 SGLAKGDAVRDVDIIDHHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGVSPSLDL 944
S + I D+ D T TV+Y P + G ++V Y + I SPF V +
Sbjct: 1209SVIMPSGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVD---SV 1379
Query: 945 SKIKVSGLGDKVDVGKDQE---FTVKSKGAGGQGKVASKIVSPSGAAVPC 991
+ V+ G + G E FT+ +K AG G +A + PS + C
Sbjct: 1380NSGYVTAYGPGLSHGVVYEPAVFTINTKEAGA-GGLALAVEGPSKTEIKC 1526
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 178/384 (46%), Gaps = 8/384 (2%)
Frame = +3
Query: 2208 GAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA 2267
G GGL + +EGP +A++ +D +DG+C V Y +PG Y++SV F ++ I DSPF V +
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQ 182
Query: 2268 SPSGDARRLTVS--SLQESGLKVNQPASFAVSLNGAKGA-IDAKVHSP-SGALEECYVTE 2323
+P DA ++ L S + N PA F V A A +D P SGA +E +
Sbjct: 183 NPV-DASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVP 359
Query: 2324 IDQDKYAVRFIPRENGIYLIDVKFNGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAGLEGG 2383
+++ Y ++PR G +DVK+ G +P SPF ++V G DP V G G+
Sbjct: 360 VEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLP---GVDPSKVKVSGPGVRRS 530
Query: 2384 VTGS-PAEFIVNTSNAGAGALSVTIDGP--SKVKMDCQECPEG-YRVTYTPMAPGSYLIS 2439
V S PA+F V+T +AG L + P S +K Q +G Y V YTP G Y I
Sbjct: 531 VPASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDII 710
Query: 2440 IKYGGPYHIGGSPFKAKVTGPRLVSNHSLHETSSVFVDSLTKVATVPQHATSGPGPADVS 2499
+KY G + SPF + T L + S + T G
Sbjct: 711 VKYDG-QDVPRSPFNVEAT--------PLGDASQCRI-------------TDG-----AE 809
Query: 2500 KVVAKGLGLSKAYVGQKSNFTVDCSKAGNNMLLVGVHGPRTPCEEILVKHMGSRLYSVSY 2559
+V+ + +++ TVD + AG + + P +I + G +++S+
Sbjct: 810 RVIP---------IEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTISF 962
Query: 2560 LLKDKGEYTLVVKWGDEHIPGSPY 2583
+ + GEY + +K+G +P Y
Sbjct: 963 IPQYAGEYIIEIKFGGNFVPDGQY 1034
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 153/330 (46%), Gaps = 16/330 (4%)
Frame = +3
Query: 2133 EGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQFTV-GPLGEGGAHKVRAGGPGLER 2191
+ + T + + P + G + +SV + + + SPF + P+ A KV+ GPGL+
Sbjct: 63 DNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVD---ASKVKCYGPGLDA 233
Query: 2192 AE--AGVPAEFGIWTREAGAGGLAIAVEGP---SKAEISFEDRKDGSCGVAYVVQEPGDY 2246
+E A +PA F + R+AG L + P ++ E ++G Y+ + G
Sbjct: 234 SEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAEGKC 413
Query: 2247 EVSVKFNEEHIPDSPFVVPVASPSGDARRLTVSS--LQESGLKVNQPASFAVSLNGAKGA 2304
+V VK+ + +P+SPF + V P D ++ VS ++ S + + PA F V A A
Sbjct: 414 KVDVKYGGKPVPNSPFHMQVL-PGVDPSKVKVSGPGVRRS-VPASLPAQFTVDTRDAGVA 587
Query: 2305 -IDAKVHSPSGALEECYVTEIDQDKYAVRFIPRENGIYLIDVKFNGTHIPGSPFKIRVGE 2363
++ V P G+ + Y + Y V + P + G+Y I VK++G +P SPF +
Sbjct: 588 DLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFNVEATP 767
Query: 2364 PGHGGDPGLVSAYGAGLEGGVTGSPAE----FIVNTSNAGAGALSVTIDGPSKVKMDCQE 2419
G + +G P E V+ ++AG G+++ I PS +D
Sbjct: 768 LGDASQCRIT-------DGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDI 926
Query: 2420 CPEG---YRVTYTPMAPGSYLISIKYGGPY 2446
+G + +++ P G Y+I IK+GG +
Sbjct: 927 VDQGDGTFTISFIPQYAGEYIIEIKFGGNF 1016
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 11/260 (4%)
Frame = +3
Query: 271 VKKRAEFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVT 330
++K TV+ AG+G V + P+G + + D TF++ ++P+ G + +
Sbjct: 822 IEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQGDG--TFTISFIPQYAGEYIIE 995
Query: 331 VLFAG----------QHIAKSPFEVYVDKSQGDASKVTAQGPGLEPS-GNIANKTTYFEI 379
+ F G + + + +E Y+ D V Q + + G+ + F+
Sbjct: 996 IKFGGNFVPDGQYTAEAVPEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQ- 1172
Query: 380 FTAGAGMGEVEVVIQDPTGQKGTVEPQLEARGDSTYRCSYQPTMEGVHTVHVTFAGVPIP 439
F G V + P+G+ T P++E D T YQPT G+H +HV + I
Sbjct: 1173 FPVGPIFNFVSASVIMPSGK--TSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQ 1346
Query: 440 RSPYTVTVGQACNPAACRAIGRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEE 499
SP+ V + N A G GL GV V E A F + TK AG+G L + V+GP E
Sbjct: 1347 GSPFFFHV-DSVNSGYVTAYGPGLS-HGV-VYEPAVFTINTKEAGAGGLALAVEGPSKTE 1517
Query: 500 RVKQKDLGDGVYGFEYYPTI 519
+K D DG Y P++
Sbjct: 1518 -IKCVDNQDGTCNVSYLPSV 1574
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 4/193 (2%)
Frame = +3
Query: 2399 GAGALSVTIDGPSKVKMDCQECPEGY-RVTYTPMAPGSYLISIKYGGPYHIGGSPFKAKV 2457
G G L + I+GP + KM C + +G RV Y P PG Y IS+ +G I SPF K+
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDK-PIKDSPFSVKI 179
Query: 2458 TGPRLVSNHSLHETSSVFVDSLTKVATVPQHATSGPGPADVSKVVAKGLGLSKAYVGQK- 2516
P D SKV G GL + V
Sbjct: 180 QNP-----------------------------------VDASKVKCYGPGLDASEVAANL 254
Query: 2517 -SNFTVDCSKAGNNMLLVGVHGPRTPCE-EILVKHMGSRLYSVSYLLKDKGEYTLVVKWG 2574
+ FTVD AG L V P + + E + + LY +Y+ + +G+ + VK+G
Sbjct: 255 PAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAEGKCKVDVKYG 434
Query: 2575 DEHIPGSPYRIMV 2587
+ +P SP+ + V
Sbjct: 435 GKPVPNSPFHMQV 473
>16231
Length = 1393
Score = 260 bits (664), Expect(2) = 1e-89, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 196/288 (68%), Gaps = 5/288 (1%)
Frame = +3
Query: 286 QGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFEV 345
+G+V V + +P G +E +V NND+N T+S YVP + G +KV +LFA + IAKSPF V
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 346 YVDKSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGMGEVEVVIQDPTGQKGTVEP 405
V+ + GDASKVTA GPGLE +G +A K T+FE+F GAG G+V+VVI DP G+K V P
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRP 536
Query: 406 QLEAR--GDSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPAACRAIGRGL 463
++++ D+TY Y +G+H+V+V FAG IP SP+ V V A N AC A GRG+
Sbjct: 537 KVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGV 716
Query: 464 QPKGVRVKETADFKVYTKGAGSGELKVTVKGPKG-EERVKQKDLGDG--VYGFEYYPTIP 520
QP+GVRVK+ ADF V+TKGAG GE+ V + GP G EE+ + K + D V+ Y P+ P
Sbjct: 717 QPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKP 896
Query: 521 GTYTVTITWGGQNIGRSPFEVKVGTECGNQKVRAWGPGLEGGIVGKSA 568
G Y + IT+G Q+I +SPF+++VG K+RA+GPGLEGG+V + A
Sbjct: 897 GNYIINITFGDQHISKSPFKIEVGPY-KESKIRAYGPGLEGGVVQQKA 1037
Score = 90.5 bits (223), Expect(2) = 1e-89, Method: Composition-based stats.
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = +1
Query: 229 SVMTYLSQFPKAKLKPGAPLRPKLNPKKARAYGPGIEPTGNMVKKRAEFTVETRSAGQG 287
S+MTYLSQFP AKLK GAPLRP+LNP + RAYGPG+EP GN V A FTVET SAG+G
Sbjct: 7 SMMTYLSQFPNAKLKAGAPLRPRLNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 139 bits (351), Expect(3) = 6e-60, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 146/288 (50%), Gaps = 8/288 (2%)
Frame = +3
Query: 774 QGDVSIGIKCAPGVVGPTEAXXXXXXXXXXXXTFTVKYTPCGAGSYTIMVLFADQATPTS 833
+GDV + I GV E T++ Y P G Y + +LFA++ S
Sbjct: 177 KGDVEVSILNPKGV----EETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKS 344
Query: 834 PIRVKVE-PSHDASKVKAEGPGLNRTGVELGKPTHFTVNAKTAGKGKLDVQ-FSGLAKGD 891
P V VE + DASKV A GPGL +TGV K T F V K AG GK+DV + D
Sbjct: 345 PFTVTVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKD 524
Query: 892 AVR-DVDIIDHHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGVSPSLDLSKIKVS 950
VR V D TY V+Y+ + QG VNV + G IP SPF V V+P+ + +
Sbjct: 525 NVRPKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYAT 704
Query: 951 GLGDK---VDVGKDQEFTVKSKGAGGQGKVASKIVSPSGAAVPCKVE--PGLGADNSVVR 1005
G G + V V +F V +KGA G G+VA +I+ P G C+++ P V
Sbjct: 705 GRGVQPRGVRVKDRADFYVHTKGA-GDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECV- 878
Query: 1006 FVPREEGPYEVEVTYDGVPVPGSPFPLEAVAPTKPSKVKAFGPGLQGG 1053
+ P + G Y + +T+ + SPF +E V P K SK++A+GPGL+GG
Sbjct: 879 YNPSKPGNYIINITFGDQHISKSPFKIE-VGPYKESKIRAYGPGLEGG 1019
Score = 100 bits (249), Expect(3) = 6e-60, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 1048 PGLQGGNAGSPARFTIDTKXXXXXXXXXXVEGPCEAQLECLDNGDGTCSVSYVPTEPGDY 1107
PG +GG A RFT++T +EGP +AQ+ECLDNGDG+ V Y+PT PG+Y
Sbjct: 1007 PGRRGGAA--EGRFTVETNGETGALGFS-IEGPSQAQIECLDNGDGSADVWYLPTMPGEY 1177
Query: 1108 NINILFADTHIPGSPFKAHVAPC--FDASKVKCSGPGLERA--TAGEVGQFQVDCSSAGS 1163
++IL +D IP SPF A + P FDA KV GPGLE++ + +F VD +AG
Sbjct: 1178 AVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGK 1357
Query: 1164 AELTI 1168
A L I
Sbjct: 1358 APLVI 1372
Score = 33.1 bits (74), Expect(3) = 6e-60, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 741 HPNKVKVYGPGVAKTGLKAHEPTYFTVDCTEAGQG 775
+P +V+ YGPG+ G + P FTV+ AG+G
Sbjct: 79 NPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Frame = +2
Query: 536 RSPFEVKVGTECGNQKVRAWG-PGLEGGIVGKSADFVVEAIGDDVGTLGFSVEGPSQAKI 594
+ P + + G G Q W PG GG F VE G+ G LGFS+EGPSQA+I
Sbjct: 941 QKPLQDRGGPLXGEQDQGLWTRPGRRGGAA--EGRFTVETNGE-TGALGFSIEGPSQAQI 1111
Query: 595 ECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREAPQDFHPDRVKARGPG 654
EC D GDGS DV Y P GEYAVH+LC+ EDI SPFMADI+ A DF ++V A+GPG
Sbjct: 1112 ECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPA-ADFDAEKVIAKGPG 1288
Query: 655 LEKTGVAVNKPAEFTVDAKHAGKAPLRVQVQDNE 688
LEK+GVA NK AEFTVD K AGKAPL + D +
Sbjct: 1289 LEKSGVAPNKWAEFTVDTKAAGKAPLVITGMDTD 1390
Score = 80.1 bits (196), Expect(3) = 6e-33, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 121/297 (40%), Gaps = 19/297 (6%)
Frame = +3
Query: 1550 EGLLAVQITDPEGKPKKTHIQDNHDG--TYTVAYVPDVPGRYTILIKYGGDEIPFSPYRV 1607
+G + V I +P+G + ++ N+D TY+ AYVP + G Y + I + I SP+ V
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1608 RAV-PTGDASKCTVTVSIXXXXXXXXXXPTIQIGEETVITVDTKAAGKGKVTCTVCTPDG 1666
GDASK T + + ++T V K AG GKV + P G
Sbjct: 357 TVEGAAGDASKVTAS-------GPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHG 515
Query: 1667 SXXXXXXXXXXX----GTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTIPERPMVGV- 1721
T+ + Y G + + V F G +PNSPF V +
Sbjct: 516 RKDNVRPKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKAC 695
Query: 1722 ----NGLDVTSLRPFDLVIPFTIKKGEITGEVRM----PSG---KVAQPSITDNKDGTVT 1770
G+ +R D + KG GEV + P G K + D +
Sbjct: 696 YATGRGVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWEC 875
Query: 1771 VRYSPSEAGLHEMDIRYDNMHIPGSPLQFYVDYVNCGHITAYGPGLTHGVVNKPATF 1827
V Y+PS+ G + ++I + + HI SP + V I AYGPGL GVV + A
Sbjct: 876 V-YNPSKPGNYIINITFGDQHISKSPFKIEVGPYKESKIRAYGPGLEGGVVQQKAVL 1043
Score = 69.7 bits (169), Expect(3) = 6e-33, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 1827 FTVNTKDAGE-GGLSLAIEGPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNDQHIP 1885
FTV T GE G L +IEGPS+A+I C DN DG+ V YLP +PG+Y++ + +D+ IP
Sbjct: 1040 FTVETN--GETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIP 1213
Query: 1886 GSPFTARV 1893
SPF A +
Sbjct: 1214 KSPFMADI 1237
Score = 32.3 bits (72), Expect(3) = 6e-33, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 1514 PTHDASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGL 1552
P + ++V+A GPGL G P FT++ AG G+
Sbjct: 70 PRLNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRGM 186
Score = 106 bits (264), Expect(3) = 5e-32, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 127/283 (44%), Gaps = 9/283 (3%)
Frame = +3
Query: 593 KIECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREAPQDFHPDRVKARG 652
++E ++ + + Y P G Y V++L ++ I SPF + A D +V A G
Sbjct: 231 EVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGD--ASKVTASG 404
Query: 653 PGLEKTGVAVNKPAEFTVDAKHAGKAPLRVQVQDNEGC--SVEATVKD--NGNGTYSCSY 708
PGLEKTGV K F V K AG + V + D G +V V+ + + TY Y
Sbjct: 405 PGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYLVEY 584
Query: 709 VPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLKAHEPTYFTVD 768
V H+ V + G IPNSPF V V S+ G GV G++ + F V
Sbjct: 585 VTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPRGVRVKDRADFYVH 764
Query: 769 CTEAGQGDVSIGIKCAPGVVGPTEAXXXXXXXXXXXXTFTVKYTPCGAGSYTIMVLFADQ 828
AG G+V++ I PG V E + Y P G+Y I + F DQ
Sbjct: 765 TKGAGDGEVAVQI-IGPGGV---EEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQ 932
Query: 829 ATPTSPIRVKVEPSHDASKVKAEGPGL-----NRTGVELGKPT 866
SP +++V P + SK++A GPGL + V L +PT
Sbjct: 933 HISKSPFKIEVGP-YKESKIRAYGPGLEGGVVQQKAVLLWRPT 1058
Score = 45.1 bits (105), Expect(3) = 5e-32, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +2
Query: 896 VDIIDHHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGVSPSLDLSKIKVSGLG-- 953
++ +D+ D + V Y+P G V++ + IPKSPF + P+ D KV G
Sbjct: 1109 IECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPG 1288
Query: 954 ---DKVDVGKDQEFTVKSKGAG 972
V K EFTV +K AG
Sbjct: 1289 LEKSGVAPNKWAEFTVDTKAAG 1354
Score = 27.7 bits (60), Expect(3) = 5e-32, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +1
Query: 551 KVRAWGPGLE--GGIVGKSADFVVE 573
+VRA+GPGLE G VG A F VE
Sbjct: 88 RVRAYGPGLEPKGNQVGAPARFTVE 162
Score = 105 bits (263), Expect(2) = 2e-31, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Frame = +3
Query: 256 KARAYGPGIEPTGNMVKKRAEFTVETRSAGQGEVLVYVEDPAGHQEEA--KVTANNDKNR 313
K A GPG+E TG + K+ F V + AG G+V V + DP G ++ KV + DK+
Sbjct: 387 KVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDA 566
Query: 314 TFSVWYVPEVTGTHKVTVLFAGQHIAKSPFEVYVDKSQGDASKVTAQGPGLEPSGNIANK 373
T+ V YV G H V V FAG I SPF V V + +A A G G++P G
Sbjct: 567 TYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPAS-NAKACYATGRGVQPRGVRVKD 743
Query: 374 TTYFEIFTAGAGMGEVEVVIQDPTGQKGTVEPQLEARGDSTYRCSYQPTMEGVHTVHVTF 433
F + T GAG GEV V I P G + + + + C Y P+ G + +++TF
Sbjct: 744 RADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITF 923
Query: 434 AGVPIPRSPYTVTVGQACNPAACRAIGRGLQ 464
I +SP+ + VG + RA G GL+
Sbjct: 924 GDQHISKSPFKIEVG-PYKESKIRAYGPGLE 1013
Score = 50.8 bits (120), Expect(2) = 2e-31, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Frame = +2
Query: 476 FKVYTKGAGSGELKVTVKGPKGEERVKQKDLGDGVYGFEYYPTIPGTYTVTITWGGQNIG 535
F V T G +G L +++GP + +++ D GDG Y PT+PG Y V I ++I
Sbjct: 1040 FTVETNGE-TGALGFSIEGPS-QAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIP 1213
Query: 536 RSPF--EVKVGTECGNQKVRAWGPGLEGGIVG--KSADFVVE 573
+SPF ++K + +KV A GPGLE V K A+F V+
Sbjct: 1214 KSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVD 1339
Score = 111 bits (278), Expect(2) = 2e-29, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 121/267 (45%), Gaps = 1/267 (0%)
Frame = +3
Query: 688 EGCSVEATVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNV-GAGSHPNKVK 746
E C VE ++ N TYSC+YVP + + + I SPF V V GA +KV
Sbjct: 222 ETCEVE--FNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASKVT 395
Query: 747 VYGPGVAKTGLKAHEPTYFTVDCTEAGQGDVSIGIKCAPGVVGPTEAXXXXXXXXXXXXT 806
GPG+ KTG+ A + T+F V AG G V + I G T
Sbjct: 396 ASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHG--RKDNVRPKVQSAPDKDAT 569
Query: 807 FTVKYTPCGAGSYTIMVLFADQATPTSPIRVKVEPSHDASKVKAEGPGLNRTGVELGKPT 866
+ V+Y G +++ V FA P SP V+V P+ +A A G G+ GV +
Sbjct: 570 YLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPRGVRVKDRA 749
Query: 867 HFTVNAKTAGKGKLDVQFSGLAKGDAVRDVDIIDHHDNTYTVKYIPVQQGPVGVNVTYGG 926
F V+ K AG G++ VQ G + + + + Y P + G +N+T+G
Sbjct: 750 DFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGD 929
Query: 927 DHIPKSPFSVGVSPSLDLSKIKVSGLG 953
HI KSPF + V P + SKI+ G G
Sbjct: 930 QHISKSPFKIEVGPYKE-SKIRAYGPG 1007
Score = 38.5 bits (88), Expect(2) = 2e-29, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 643 FHPDRVKARGPGLEKTGVAVNKPAEFTVDAKHAGKAPLR 681
+P RV+A GPGLE G V PA FTV+ AG+ R
Sbjct: 76 LNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRGMWR 192
Score = 89.0 bits (219), Expect(2) = 1e-28, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 125/280 (44%), Gaps = 13/280 (4%)
Frame = +3
Query: 1924 LTATVVPPSGREEPCLLK--RLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVIS 1981
+ +++ P G EE C ++ RN ++VP G + V++ + +A SP V +
Sbjct: 186 VEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTV- 362
Query: 1982 QSEIGDASRVRVSGQGLHEGHTFEPAE--FIIDTRDAGYGGLSLSIEGPS------KVDI 2033
+ GDAS+V SG GL + + F + + AG G + + I P + +
Sbjct: 363 EGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKV 542
Query: 2034 NTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESI-TRRRRAP 2092
+ +D T V Y + G + +N+ FA +P SPF V+V K T R P
Sbjct: 543 QSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQP 722
Query: 2093 SVANIGSHCDLSLKIPEISIQDMTAQVTSPSGKTHEAEI--VEGENHTYCIRFVPAEMGM 2150
+ D + ++ Q+ P G + ++ V + + + P++ G
Sbjct: 723 RGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGN 902
Query: 2151 HTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLE 2190
+ +++ + QH+ SPF+ VGP E K+RA GPGLE
Sbjct: 903 YIINITFGDQHISKSPFKIEVGPYKES---KIRAYGPGLE 1013
Score = 58.5 bits (140), Expect(2) = 1e-28, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Frame = +2
Query: 2201 GIWTREAGAGG----------------LAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPG 2244
G+WTR GG L ++EGPS+A+I D DGS V Y+ PG
Sbjct: 992 GLWTRPGRRGGAAEGRFTVETNGETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPG 1171
Query: 2245 DYEVSVKFNEEHIPDSPFVVPVA-SPSGDARRLTVS--SLQESGLKVNQPASFAVSLNGA 2301
+Y V + ++E IP SPF+ + + DA ++ L++SG+ N+ A F V A
Sbjct: 1172 EYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAA 1351
Score = 97.8 bits (242), Expect(3) = 7e-28, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 122/277 (44%), Gaps = 14/277 (5%)
Frame = +3
Query: 1266 VKARVANPSGNLTDTYVQDCGDG--TYKVEYTPYEEGVHSVDVTYDGXXXXXXXXXXXXT 1323
V+ + NP G V+ D TY Y P EG + V++ +
Sbjct: 186 VEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILF-ANKVIAKSPFTVTV 362
Query: 1324 EGC--DPSRVRVHGPGIQSG--TTNKPNKFTXXXXXXXXXXXXXXXXXPS------EAKM 1373
EG D S+V GPG++ K F P K+
Sbjct: 363 EGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKV 542
Query: 1374 SCMDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVHDVTDASKVKCSGPGLSP 1433
+KD + VEY+ + G +S+NV + G Q+P SPF V V ++A +G G+ P
Sbjct: 543 QSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQP 722
Query: 1434 GMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNADGTQTVN--YVPSREGS 1491
VR F V T AG + V++ GP G+ E + D + Y PS+ G+
Sbjct: 723 RGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGN 902
Query: 1492 YSISVLYGEEEVPRSPFKVKVLPTHDASKVKASGPGL 1528
Y I++ +G++ + +SPFK++V P + SK++A GPGL
Sbjct: 903 YIINITFGDQHISKSPFKIEVGP-YKESKIRAYGPGL 1010
Score = 42.0 bits (97), Expect(3) = 7e-28, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +2
Query: 1564 PKKTHIQ--DNHDGTYTVAYVPDVPGRYTILIKYGGDEIPFSPYRVRAVPTGDASKCTVT 1621
P + I+ DN DG+ V Y+P +PG Y + I ++IP SP+ P D V
Sbjct: 1094 PSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVI 1273
Query: 1622 VSIXXXXXXXXXXPTIQIGEETVITVDTKAAGKGKVTCT 1660
+ + TVDTKAAGK + T
Sbjct: 1274 AK-----GPGLEKSGVAPNKWAEFTVDTKAAGKAPLVIT 1375
Score = 25.0 bits (53), Expect(3) = 7e-28, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 1222 VEPAVDTSGVQCYGPGIEGQGVFREATTEFSVD 1254
+ P ++ + V+ YGPG+E +G A F+V+
Sbjct: 64 LRPRLNPARVRAYGPGLEPKGNQVGAPARFTVE 162
Score = 115 bits (288), Expect(2) = 2e-26, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Frame = +3
Query: 1377 DNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVHDVT-DASKVKCSGPGLSPGM 1435
++++ + S Y+P G Y +N+ + + SPF V V DASKV SGPGL
Sbjct: 246 NDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASKVTASGPGLEKTG 425
Query: 1436 VRANLPQSFQVDTSKAGVAPLQVKVQGPKGL---VEP-VDVVDNADGTQTVNYVPSREGS 1491
V A F+V AG + V + P G V P V + D T V YV +G
Sbjct: 426 VVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYLVEYVTIDQGL 605
Query: 1492 YSISVLYGEEEVPRSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEG 1551
+S++V + ++P SPF V+V P +A A+G G+ GV +F + K AG+G
Sbjct: 606 HSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPRGVRVKDRADFYVHTKGAGDG 785
Query: 1552 LLAVQITDPEGKPKKTHIQDNHDG--TYTVAYVPDVPGRYTILIKYGGDEIPFSPYRVRA 1609
+AVQI P G +K ++ D + Y P PG Y I I +G I SP+++
Sbjct: 786 EVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKIEV 965
Query: 1610 VP 1611
P
Sbjct: 966 GP 971
Score = 24.6 bits (52), Expect(2) = 2e-26, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +1
Query: 1327 DPSRVRVHGPGIQ--SGTTNKPNKFT 1350
+P+RVR +GPG++ P +FT
Sbjct: 79 NPARVRAYGPGLEPKGNQVGAPARFT 156
Score = 84.0 bits (206), Expect(2) = 1e-24, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Frame = +3
Query: 228 HSVMTYL--SQFPKAKLKPGAPLRPKLNPKKARAYGPGIEPTGNMVKKRAEFTVETRSAG 285
HSV + SQ P + G + P N K A G G++P G VK RA+F V T+ AG
Sbjct: 606 HSVNVFFAGSQIPNSPF--GVQVAPASNAKACYATGRGVQPRGVRVKDRADFYVHTKGAG 779
Query: 286 QGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFEV 345
GEV V + P G +E+ ++ D+ + Y P G + + + F QHI+KSPF++
Sbjct: 780 DGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKI 959
Query: 346 YVDKSQGDASKVTAQGPGLE 365
V + SK+ A GPGLE
Sbjct: 960 EVGPYK--ESKIRAYGPGLE 1013
Score = 50.1 bits (118), Expect(2) = 1e-24, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Frame = +2
Query: 383 GAGMGEVEVVIQDPTGQ-----KGTVEPQLEA--RGDSTYRCSYQPTMEGVHTVHVTFAG 435
GA G V TG +G + Q+E GD + Y PTM G + VH+ +
Sbjct: 1022 GAAEGRFTVETNGETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSD 1201
Query: 436 VPIPRSPYTVTVGQACNPAACRAI--GRGLQPKGVRVKETADFKVYTKGAGSGELKVT 491
IP+SP+ + A + A + I G GL+ GV + A+F V TK AG L +T
Sbjct: 1202 EDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVIT 1375
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 143/296 (48%), Gaps = 17/296 (5%)
Frame = +3
Query: 2114 DMTAQVTSPSG--KTHEAEIVEGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQFTV 2171
D+ + +P G +T E E N TY +VP G + V++ + + + SPF TV
Sbjct: 183 DVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTV 362
Query: 2172 GPLGEGGAHKVRAGGPGLERAEAGVPAE----FGIWTREAGAGGLAIAVEGPS------K 2221
G A KV A GPGLE+ GV A F ++ + AG G + + + P +
Sbjct: 363 -EGAAGDASKVTASGPGLEKT--GVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVR 533
Query: 2222 AEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASPSGDARRL--TVS 2279
++ KD + V YV + G + V+V F IP+SPF V VA P+ +A+ T
Sbjct: 534 PKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVA-PASNAKACYATGR 710
Query: 2280 SLQESGLKVNQPASFAVSLNGA-KGAIDAKVHSPSGALEECYVTEI-DQ-DKYAVRFIPR 2336
+Q G++V A F V GA G + ++ P G E+C + ++ DQ + + + P
Sbjct: 711 GVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPS 890
Query: 2337 ENGIYLIDVKFNGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAGLEGGVTGSPAEFI 2392
+ G Y+I++ F HI SPFKI VG + AYG GLEGGV A +
Sbjct: 891 KPGNYIINITFGDQHISKSPFKIEVGPYKESK----IRAYGPGLEGGVVQQKAVLL 1046
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 124/247 (50%), Gaps = 12/247 (4%)
Frame = +3
Query: 2223 EISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASPSGDARRLTVS--S 2280
E+ F + ++ + AYV G Y+V++ F + I SPF V V +GDA ++T S
Sbjct: 231 EVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASKVTASGPG 410
Query: 2281 LQESGLKVNQPASFAVSLNGA-KGAIDAKVHSPSGALEEC---YVTEIDQDK-YAVRFIP 2335
L+++G+ + F V + GA G +D + P G + + D+D Y V ++
Sbjct: 411 LEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYLVEYVT 590
Query: 2336 RENGIYLIDVKFNGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAGLEGGVTGSPAEFIVNT 2395
+ G++ ++V F G+ IP SPF ++V P + G G A+F V+T
Sbjct: 591 IDQGLHSVNVFFAGSQIPNSPFGVQVA-PASNAKACYATGRGVQPRGVRVKDRADFYVHT 767
Query: 2396 SNAGAGALSVTIDGPSKVKMDCQ-----ECPEGYRVTYTPMAPGSYLISIKYGGPYHIGG 2450
AG G ++V I GP V+ CQ + PE + Y P PG+Y+I+I +G HI
Sbjct: 768 KGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGD-QHISK 944
Query: 2451 SPFKAKV 2457
SPFK +V
Sbjct: 945 SPFKIEV 965
Score = 81.3 bits (199), Expect(2) = 8e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 25/277 (9%)
Frame = +3
Query: 1836 EGGLSLAIEGPSKAEISC----TDNQDGTCSVSYLPVLPGDYSILVKYNDQHIPGSPFTA 1891
+G + ++I P E +C ++++ T S +Y+P + G Y + + + ++ I SPFT
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1892 RVTG--DDSMRMSHLKVGSAADIPINISETDLSLLT---------ATVVPPSGREEPCLL 1940
V G D+ +++ G + +T + ++ P GR++
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRP 536
Query: 1941 KRL----RNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQ 1996
K ++ + +V + G H V+V G + +SP V ++ + +A +G+
Sbjct: 537 KVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPAS--NAKACYATGR 710
Query: 1997 GLHEG--HTFEPAEFIIDTRDAGYGGLSLSIEGP----SKVDINTEDLEDGTCRVTYCPT 2050
G+ + A+F + T+ AG G +++ I GP K + + Y P+
Sbjct: 711 GVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPS 890
Query: 2051 EPGNYIINIKFADQHVPGSPFSVKVTGEGRVKESITR 2087
+PGNYIINI F DQH+ SPF ++V G KES R
Sbjct: 891 KPGNYIINITFGDQHISKSPFKIEV---GPYKESKIR 992
Score = 39.7 bits (91), Expect(2) = 8e-21, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +2
Query: 2128 EAEIVEGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGP 2187
+ E ++ + + + ++P G + V + + +P SPF + P + A KV A GP
Sbjct: 1106 QIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGP 1285
Query: 2188 GLERAEAGVP----AEFGIWTREAGAGGLAI 2214
GLE+ +GV AEF + T+ AG L I
Sbjct: 1286 GLEK--SGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 16/299 (5%)
Frame = +3
Query: 974 QGKVASKIVSPSGAAVPCKVEPGLGADNSVVR---FVPREEGPYEVEVTYDGVPVPGSPF 1030
+G V I++P G C+VE D ++ +VP EG Y+V + + + SPF
Sbjct: 177 KGDVEVSILNPKGVEETCEVE--FNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPF 350
Query: 1031 PLEAV-APTKPSKVKAFGPGLQ--GGNAGSPARFTIDTKXXXXXXXXXXVEGP------C 1081
+ A SKV A GPGL+ G A F + K + P
Sbjct: 351 TVTVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNV 530
Query: 1082 EAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVAPCFDASKVKCSGP 1141
+++ + D T V YV + G +++N+ FA + IP SPF VAP +A +G
Sbjct: 531 RPKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGR 710
Query: 1142 GLE--RATAGEVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQDHGDG--THTITYIPL 1197
G++ + F V AG E+ ++I G+ + ++ D Y P
Sbjct: 711 GVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPS 890
Query: 1198 CPGAYTVTIKYGGQPVPNFPSKLQVEPAVDTSGVQCYGPGIEGQGVFREATTEFSVDAR 1256
PG Y + I +G Q + P K++V P + S ++ YGPG+EG V ++A + AR
Sbjct: 891 KPGNYIINITFGDQHISKSPFKIEVGPYKE-SKIRAYGPGLEGGVVQQKAVLLWRPTAR 1064
Score = 70.9 bits (172), Expect(3) = 1e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 26/240 (10%)
Frame = +3
Query: 1680 TFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTI-----------PERPMVGVNGLDVTS 1728
T+ Y G Y + + F + + SPF VT+ P + G+ T
Sbjct: 261 TYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASKVTASGPGLEKTGVVATK 440
Query: 1729 LRPFDLVIPFTIKKGEITGEVRM----PSGKV--AQPSITD--NKDGTVTVRYSPSEAGL 1780
F++ + KG G+V + P G+ +P + +KD T V Y + GL
Sbjct: 441 KTFFEVFV-----KGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYLVEYVTIDQGL 605
Query: 1781 HEMDIRYDNMHIPGSPLQFYVD-YVNCGHITAYGPGLT-HGV-VNKPATFTVNTKDAGEG 1837
H +++ + IP SP V N A G G+ GV V A F V+TK AG+G
Sbjct: 606 HSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPRGVRVKDRADFYVHTKGAGDG 785
Query: 1838 GLSLAIEGPSKAEISC----TDNQDGTCSVSYLPVLPGDYSILVKYNDQHIPGSPFTARV 1893
+++ I GP E C +Q Y P PG+Y I + + DQHI SPF V
Sbjct: 786 EVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKIEV 965
Score = 37.4 bits (85), Expect(3) = 1e-17, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 1924 LTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQS 1983
L ++ PS + CL +G + ++P GE+ VH+ + + + SP I +
Sbjct: 1073 LGFSIEGPSQAQIECLDNG--DGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPA 1246
Query: 1984 EIGDASRVRVSGQGLHEGHTF--EPAEFIIDTRDAGYGGLSLS 2024
DA +V G GL + + AEF +DT+ AG L ++
Sbjct: 1247 ADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVIT 1375
Score = 21.9 bits (45), Expect(3) = 1e-17, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 1638 QIGEETVITVDTKAAGKGKVTCTVCTPDGS 1667
Q+G TV+T +AG+G C T S
Sbjct: 130 QVGAPARFTVETFSAGRGMWRCLFSTLKAS 219
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 20/268 (7%)
Frame = +3
Query: 2019 GGLSLSIEGPSKVDINTE----DLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVK 2074
G + +SI P V+ E + + T Y PT G+Y +NI FA++ + SPF+V
Sbjct: 180 GDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVT 359
Query: 2075 VTGEG----RVKESITRRRRAPSVANIGSHCDLSLKIPEISIQDMTAQVTSPSGKTH--- 2127
V G +V S + VA + ++ +K D+ + P G+
Sbjct: 360 VEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVV--ILDPHGRKDNVR 533
Query: 2128 -EAEIVEGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGG 2186
+ + ++ TY + +V + G+H+V+V + G +P SPF V P A A G
Sbjct: 534 PKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASN--AKACYATG 707
Query: 2187 PGLERAEAGVP--AEFGIWTREAGAGGLAIAVEGPSKAEISFEDRK------DGSCGVAY 2238
G++ V A+F + T+ AG G +A+ + GP E + +K C Y
Sbjct: 708 RGVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWEC--VY 881
Query: 2239 VVQEPGDYEVSVKFNEEHIPDSPFVVPV 2266
+PG+Y +++ F ++HI SPF + V
Sbjct: 882 NPSKPGNYIINITFGDQHISKSPFKIEV 965
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Frame = +2
Query: 1444 FQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNADGTQTVNYVPSREGSYSISVLYGEEEV 1503
F V+T+ L ++GP ++ +DN DG+ V Y+P+ G Y++ +L +E++
Sbjct: 1040 FTVETNGE-TGALGFSIEGPS--QAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDI 1210
Query: 1504 PRSPFKVKVLPT--HDASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITD 1559
P+SPF + P DA KV A GPGL +GV + EFT+D K AG+ L + D
Sbjct: 1211 PKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVITGMD 1384
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 1368 PSEAKMSCMDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVHDVT--DASKVK 1425
PS+A++ C+DN DGS V Y+P G Y++++ +P SPF + DA KV
Sbjct: 1094 PSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVI 1273
Query: 1426 CSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQV 1458
GPGL V N F VDT AG APL +
Sbjct: 1274 AKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 120/300 (40%), Gaps = 14/300 (4%)
Frame = +3
Query: 2302 KGAIDAKVHSPSGALEECYVTEIDQDK---YAVRFIPRENGIYLIDVKFNGTHIPGSPFK 2358
KG ++ + +P G E C V E + D+ Y+ ++P G Y +++ F I SPF
Sbjct: 177 KGDVEVSILNPKGVEETCEV-EFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFT 353
Query: 2359 IRVGEPGHGGDPGLVSAYGAGLE--GGVTGSPAEFIVNTSNAGAGALSVTIDGP----SK 2412
+ V G GD V+A G GLE G V F V AG G + V I P
Sbjct: 354 VTV--EGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDN 527
Query: 2413 VKMDCQECPEG---YRVTYTPMAPGSYLISIKYGGPYHIGGSPFKAKVTGPRLVSNHSLH 2469
V+ Q P+ Y V Y + G + +++ + G I SPF +V SN
Sbjct: 528 VRPKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGS-QIPNSPFGVQVAP---ASN---- 683
Query: 2470 ETSSVFVDSLTKVATVPQHATSGPGPADVSKVVAKGLGLSKAYVGQKSNFTVDCSKAGNN 2529
A +G+ V +++F V AG+
Sbjct: 684 --------------------------AKACYATGRGVQPRGVRVKDRADFYVHTKGAGDG 785
Query: 2530 MLLVGVHGPRTPCEEILVKHMGSR--LYSVSYLLKDKGEYTLVVKWGDEHIPGSPYRIMV 2587
+ V + GP E+ +K + + ++ Y G Y + + +GD+HI SP++I V
Sbjct: 786 EVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKIEV 965
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +2
Query: 277 FTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLFAGQ 336
FTVET G + +E P+ +A++ ++ + + VWY+P + G + V +L + +
Sbjct: 1040 FTVETNGE-TGALGFSIEGPS----QAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDE 1204
Query: 337 HIAKSPFEVYVD-KSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGMGEVEVVIQD 395
I KSPF + + DA KV A+GPGLE SG NK F + T AG + + D
Sbjct: 1205 DIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVITGMD 1384
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +2
Query: 809 VKYTPCGAGSYTIMVLFADQATPTSPIRVKVEPS--HDASKVKAEGPGLNRTGVELGKPT 866
V Y P G Y + +L +D+ P SP ++P+ DA KV A+GPGL ++GV K
Sbjct: 1145 VWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWA 1324
Query: 867 HFTVNAKTAGKGKL 880
FTV+ K AGK L
Sbjct: 1325 EFTVDTKAAGKAPL 1366
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Frame = +2
Query: 1145 RATAGEVGQFQVDCS-SAGSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYT 1203
R A E G+F V+ + G+ +IE S+A ++ D+GDG+ + Y+P PG Y
Sbjct: 1016 RGGAAE-GRFTVETNGETGALGFSIEGPSQA----QIECLDNGDGSADVWYLPTMPGEYA 1180
Query: 1204 VTIKYGGQPVPNFPSKLQVEPAVDTSG--VQCYGPGIEGQGVFREATTEFSVDARA 1257
V I + +P P ++PA D V GPG+E GV EF+VD +A
Sbjct: 1181 VHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKA 1348
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +2
Query: 2019 GGLSLSIEGPSKVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKV 2075
G L SIEGPS+ I D DG+ V Y PT PG Y ++I +D+ +P SPF +
Sbjct: 1067 GALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADI 1237
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Frame = +2
Query: 668 FTVDAKHAGKAPLRVQVQDNE-----GCSVEATVK------DNGNGTYSCSYVPRKPVKH 716
+T + G A R V+ N G S+E + DNG+G+ Y+P P ++
Sbjct: 998 WTRPGRRGGAAEGRFTVETNGETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEY 1177
Query: 717 TAMVSWGGVSIPNSPFRVNV--GAGSHPNKVKVYGPGVAKTGLKAHEPTYFTVDCTEAGQ 774
+ IP SPF ++ A KV GPG+ K+G+ ++ FTVD AG+
Sbjct: 1178 AVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGK 1357
Query: 775 GDVSI 779
+ I
Sbjct: 1358 APLVI 1372
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Frame = +2
Query: 2383 GVTGSPAE--FIVNTSNAGAGALSVTIDGPSKVKMDCQECPEG-YRVTYTPMAPGSYLIS 2439
G G AE F V T N GAL +I+GPS+ +++C + +G V Y P PG Y +
Sbjct: 1010 GRRGGAAEGRFTVET-NGETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVH 1186
Query: 2440 IKYGGPYHIGGSPFKAKVTGPRLVSNHSLHETSSVFVDSLTKVATVPQHATSGPGPADVS 2499
I L S+ + + S F+ + A D
Sbjct: 1187 I---------------------LCSDEDIPK--SPFMADIKPAADF-----------DAE 1264
Query: 2500 KVVAKGLGLSKAYVG--QKSNFTVDCSKAGNNMLLV 2533
KV+AKG GL K+ V + + FTVD AG L++
Sbjct: 1265 KVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 40.4 bits (93), Expect = 0.010, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +1
Query: 833 SPIRVKVEPSHDASKVKAEGPGLNRTGVELGKPTHFTVNAKTAGKGKLDVQFSGL 887
+P+R ++ P+ +V+A GPGL G ++G P FTV +AG+G FS L
Sbjct: 58 APLRPRLNPA----RVRAYGPGLEPKGNQVGAPARFTVETFSAGRGMWRCLFSTL 210
Score = 38.9 bits (89), Expect = 0.027, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 9/47 (19%)
Frame = +1
Query: 1028 SPFP---LEAVAPTKP----SKVKAFGPGLQ--GGNAGSPARFTIDT 1065
S FP L+A AP +P ++V+A+GPGL+ G G+PARFT++T
Sbjct: 25 SQFPNAKLKAGAPLRPRLNPARVRAYGPGLEPKGNQVGAPARFTVET 165
Score = 37.0 bits (84), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 240 AKLKPGAPLRPKLNPKKARAYGPGIEPTGNMVKKRAEFTVETRSAGQGEVLV 291
A +KP A + +K A GPG+E +G K AEFTV+T++AG+ +++
Sbjct: 1229 ADIKPAA----DFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 35.4 bits (80), Expect = 0.33, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +1
Query: 452 NPAACRAIGRGLQPKGVRVKETADFKVYTKGAGSG 486
NPA RA G GL+PKG +V A F V T AG G
Sbjct: 79 NPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 32.7 bits (73), Expect = 2.1, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 353 DASKVTAQGPGLEPSGNIANKTTYF--EIFTAGAGM 386
+ ++V A GPGLEP GN F E F+AG GM
Sbjct: 79 NPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRGM 186
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 1679 GTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTI 1713
G+ D++Y PG+Y + + E +P SPF I
Sbjct: 1133 GSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADI 1237
>17351
Length = 654
Score = 253 bits (646), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 156/216 (72%)
Frame = -1
Query: 2110 ISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQF 2169
I+ D+ A VTSPS T +AEI E E+ Y + FVP E+G+HTVSV+Y H+PGSPFQF
Sbjct: 654 ITSFDLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQF 475
Query: 2170 TVGPLGEGGAHKVRAGGPGLERAEAGVPAEFGIWTREAGAGGLAIAVEGPSKAEISFEDR 2229
TVGPL + G+H V+AGG GLER G PAEF +WTREAG G LAI+VEGPSKA+I F+DR
Sbjct: 474 TVGPLRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDR 295
Query: 2230 KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASPSGDARRLTVSSLQESGLKVN 2289
KDGSC V+Y V EPG+Y V +KFN+ HIPDSPF V ++ +GDA +L V + ++ +
Sbjct: 294 KDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQGNIQAD 115
Query: 2290 QPASFAVSLNGAKGAIDAKVHSPSGALEECYVTEID 2325
P F V NGAKG +DAK+ +PSG ++C++ ID
Sbjct: 114 APYQFMVRKNGAKGELDAKIVAPSGTDDDCFIQAID 7
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 11/215 (5%)
Frame = -1
Query: 1740 IKKGEITGEVRMPSGKVAQPSITDNKDGTVTVRYSPSEAGLHEMDIRYDNMHIPGSPLQF 1799
I ++ V PS I + +DG +V + P E G+H + +RY MHIPGSP QF
Sbjct: 654 ITSFDLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQF 475
Query: 1800 YVDYVN---CGHITAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDN 1856
V + + A G GL GVV +PA F V T++AG G L++++EGPSKA+I D
Sbjct: 474 TVGPLRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDR 295
Query: 1857 QDGTCSVSYLPVLPGDYSILVKYNDQHIPGSPFTARVTGD----DSMRMSHLKVGS-AAD 1911
+DG+C VSY PG+Y + +K+ND+HIP SPF ++ D + + G+ AD
Sbjct: 294 KDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQGNIQAD 115
Query: 1912 IPINI---SETDLSLLTATVVPPSGREEPCLLKRL 1943
P L A +V PSG ++ C ++ +
Sbjct: 114 APYQFMVRKNGAKGELDAKIVAPSGTDDDCFIQAI 10
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 89/153 (58%)
Frame = -1
Query: 1924 LTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQS 1983
L A V PS E ++ + +G + FVPKE G H V V+ + H+ SP +
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1984 EIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTC 2043
+ V+ G GL G EPAEF + TR+AG G L++S+EGPSK DI +D +DG+C
Sbjct: 459 RDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSC 280
Query: 2044 RVTYCPTEPGNYIINIKFADQHVPGSPFSVKVT 2076
V+Y TEPG Y + +KF D+H+P SPF V ++
Sbjct: 279 DVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYIS 181
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Frame = -1
Query: 2307 AKVHSPSGALEECYVTEIDQDKYAVRFIPRENGIYLIDVKFNGTHIPGSPFKIRVGEPGH 2366
A V SPS E+ + EI+ Y+V F+P+E G++ + V+++ HIPGSPF+ VG P
Sbjct: 633 ACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVG-PLR 457
Query: 2367 GGDPGLVSAYGAGLEGGVTGSPAEFIVNTSNAGAGALSVTIDGPSKVKMDCQECPEGY-R 2425
LV A G+GLE GV G PAEF V T AG G+L+++++GPSK ++ ++ +G
Sbjct: 456 DSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSCD 277
Query: 2426 VTYTPMAPGSYLISIKYGGPYHIGGSPFKAKVT 2458
V+Y PG Y + +K+ HI SPFK ++
Sbjct: 276 VSYKVTEPGEYRVGLKFND-RHIPDSPFKVYIS 181
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 110/214 (51%), Gaps = 7/214 (3%)
Frame = -1
Query: 977 VASKIVSPSGA---AVPCKVEPGLGADNSVVRFVPREEGPYEVEVTYDGVPVPGSPFPLE 1033
+A+ + SPS A ++E GL + V FVP+E G + V V Y + +PGSPF
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYS----VHFVPKELGVHTVSVRYSEMHIPGSPFQF- 475
Query: 1034 AVAPTKPSK---VKAFGPGLQGGNAGSPARFTIDTKXXXXXXXXXXVEGPCEAQLECLDN 1090
V P + S VKA G GL+ G G PA F + T+ VEGP +A +E D
Sbjct: 474 TVGPLRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDR 295
Query: 1091 GDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVAP-CFDASKVKCSGPGLERATAG 1149
DG+C VSY TEPG+Y + + F D HIP SPFK +++P DA K++ A
Sbjct: 294 KDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQGNIQAD 115
Query: 1150 EVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQ 1183
QF V + A EL +I + +G + +IQ
Sbjct: 114 APYQFMVRKNGA-KGELDAKIVAPSGTDDDCFIQ 16
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Frame = -1
Query: 485 SGELKVTVKGPKG-EERVKQKDLGDGVYGFEYYPTIPGTYTVTITWGGQNIGRSPFEVKV 543
S +L V P E + +++ DG+Y + P G +TV++ + +I SPF+ V
Sbjct: 648 SFDLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTV 469
Query: 544 G--TECGNQKVRAWGPGLEGGIVGKSADFVVEAIGDDVGTLGFSVEGPSQAKIECDDKGD 601
G + G+ V+A G GLE G+VG+ A+F V G+L SVEGPS+A IE D+ D
Sbjct: 468 GPLRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKD 289
Query: 602 GSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREAPQDFHPDRVKARGPGLEKTGVA 661
GSCDV Y E GEY V + N I SPF I D H V+ + +
Sbjct: 288 GSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQ----FPQGNIQ 121
Query: 662 VNKPAEFTVDAKHAGKAPLRVQV 684
+ P +F V K+ K L ++
Sbjct: 120 ADAPYQFMV-RKNGAKGELDAKI 55
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Frame = -1
Query: 1456 LQVKVQGPKGLVEPVDVVDNADGTQTVNYVPSREGSYSISVLYGEEEVPRSPFKVKVLPT 1515
L V P + E ++ + DG +V++VP G +++SV Y E +P SPF+ V P
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1516 HDASK--VKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNH 1573
D+ VKA G GL V P EF + ++AG G LA+ + P +D
Sbjct: 459 RDSGSHLVKAGGSGLERGVV--GEPAEFNVWTREAGGGSLAISVEGP--SKADIEFKDRK 292
Query: 1574 DGTYTVAYVPDVPGRYTILIKYGGDEIPFSPYRVRAVP-TGDASKCTV 1620
DG+ V+Y PG Y + +K+ IP SP++V P GDA K V
Sbjct: 291 DGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEV 148
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 3/191 (1%)
Frame = -1
Query: 807 FTVKYTPCGAGSYTIMVLFADQATPTSPIRVKVEPSHDASK--VKAEGPGLNRTGVELGK 864
++V + P G +T+ V +++ P SP + V P D+ VKA G GL R GV +G+
Sbjct: 567 YSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVKAGGSGLER-GV-VGE 394
Query: 865 PTHFTVNAKTAGKGKLDVQFSGLAKGDAVRDVDIIDHHDNTYTVKYIPVQQGPVGVNVTY 924
P F V + AG G L + G +K D ++ D D + V Y + G V + +
Sbjct: 393 PAEFNVWTREAGGGSLAISVEGPSKAD----IEFKDRKDGSCDVSYKVTEPGEYRVGLKF 226
Query: 925 GGDHIPKSPFSVGVSPSL-DLSKIKVSGLGDKVDVGKDQEFTVKSKGAGGQGKVASKIVS 983
HIP SPF V +SP D K++V + ++ D + + G +G++ +KIV+
Sbjct: 225 NDRHIPDSPFKVYISPDAGDAHKLEVQQF-PQGNIQADAPYQFMVRKNGAKGELDAKIVA 49
Query: 984 PSGAAVPCKVE 994
PSG C ++
Sbjct: 48 PSGTDDDCFIQ 16
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Frame = -1
Query: 1266 VKARVANPSGNLTDTYVQDCGDGTYKVEYTPYEEGVHSVDVTYDGXXXXXXXXXXXXTEG 1325
+ A V +PS D +Q+ DG Y V + P E GVH+V V Y
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1326 CDPSR--VRVHGPGIQSGTTNKPNKFTXXXXXXXXXXXXXXXXXPSEAKMSCMDNKDGSC 1383
D V+ G G++ G +P +F PS+A + D KDGSC
Sbjct: 459 RDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSC 280
Query: 1384 SVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVH-DVTDASKVKCSGPGLSPGMVRANLPQ 1442
V Y E G Y + + + +P SPFKV + D DA K++ G ++A+ P
Sbjct: 279 DVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQ--QFPQGNIQADAPY 106
Query: 1443 SFQVDTSKAGVAPLQVKVQGPKG 1465
F V + A L K+ P G
Sbjct: 105 QFMVRKNGAK-GELDAKIVAPSG 40
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 2/150 (1%)
Frame = -1
Query: 402 TVEPQLEARGDSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPAA--CRAI 459
T + +++ D Y + P GVHTV V ++ + IP SP+ TVG + + +A
Sbjct: 606 TEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVKAG 427
Query: 460 GRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEERVKQKDLGDGVYGFEYYPTI 519
G GL+ +GV V E A+F V+T+ AG G L ++V+GP + ++ KD DG Y T
Sbjct: 426 GSGLE-RGV-VGEPAEFNVWTREAGGGSLAISVEGPSKAD-IEFKDRKDGSCDVSYKVTE 256
Query: 520 PGTYTVTITWGGQNIGRSPFEVKVGTECGN 549
PG Y V + + ++I SPF+V + + G+
Sbjct: 255 PGEYRVGLKFNDRHIPDSPFKVYISPDAGD 166
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 9/211 (4%)
Frame = -1
Query: 1553 LAVQITDPEGKPKKTHIQDNHDGTYTVAYVPDVPGRYTILIKYGGDEIPFSPYRVRAVPT 1612
LA +T P + IQ+ DG Y+V +VP G +T+ ++Y IP SP++ P
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1613 GDASKCTVTVSIXXXXXXXXXXPTIQIGEETVITVDTKAAGKGKVTCTVCTPDGSXXXXX 1672
D+ V +GE V T+ AG G + +V P S
Sbjct: 459 RDSGSHLVKAGGSGLERGV-------VGEPAEFNVWTREAGGGSLAISVEGP--SKADIE 307
Query: 1673 XXXXXXGTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTIPERPMVG-VNGLDVTSL-- 1729
G+ D+ Y +PG+Y + ++F H+P+SPF+V I P G + L+V
Sbjct: 306 FKDRKDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYI--SPDAGDAHKLEVQQFPQ 133
Query: 1730 ------RPFDLVIPFTIKKGEITGEVRMPSG 1754
P+ ++ KGE+ ++ PSG
Sbjct: 132 GNIQADAPYQFMVRKNGAKGELDAKIVAPSG 40
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 5/196 (2%)
Frame = -1
Query: 693 EATVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVG----AGSHPNKVKVY 748
+A +++ +G YS +VP++ HT V + + IP SPF+ VG +GSH VK
Sbjct: 600 DAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSH--LVKAG 427
Query: 749 GPGVAKTGLKAHEPTYFTVDCTEAGQGDVSIGIKCAPGVVGPTEAXXXXXXXXXXXXTFT 808
G G+ + + EP F V EAG G ++I ++ GP++A +
Sbjct: 426 GSGLERGVVG--EPAEFNVWTREAGGGSLAISVE------GPSKADIEFKDRKDGSCDVS 271
Query: 809 VKYTPCGAGSYTIMVLFADQATPTSPIRVKVEP-SHDASKVKAEGPGLNRTGVELGKPTH 867
K T G Y + + F D+ P SP +V + P + DA K++ + + ++ P
Sbjct: 270 YKVTE--PGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQ--QFPQGNIQADAPYQ 103
Query: 868 FTVNAKTAGKGKLDVQ 883
F V K KG+LD +
Sbjct: 102 FMVR-KNGAKGELDAK 58
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Frame = -1
Query: 244 PGAPLRPKLNPKK------ARAYGPGIEPTGNMVKKRAEFTVETRSAGQGEVLVYVEDPA 297
PG+P + + P + +A G G+E +V + AEF V TR AG G + + VE P+
Sbjct: 495 PGSPFQFTVGPLRDSGSHLVKAGGSGLER--GVVGEPAEFNVWTREAGGGSLAISVEGPS 322
Query: 298 GHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFEVYVDKSQGDASKV 357
+A + + K+ + V Y G ++V + F +HI SPF+VY+ GDA K+
Sbjct: 321 ----KADIEFKDRKDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKL 154
Query: 358 TAQGPGLEPSGNIANKTTYFEIFTAGAGMGEVEVVIQDPTG 398
Q P GNI Y + GE++ I P+G
Sbjct: 153 EVQ---QFPQGNIQADAPYQFMVRKNGAKGELDAKIVAPSG 40
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 80/188 (42%), Gaps = 3/188 (1%)
Frame = -1
Query: 2403 LSVTIDGPSKVKMDC--QECPEG-YRVTYTPMAPGSYLISIKYGGPYHIGGSPFKAKVTG 2459
L+ + PS V D QE +G Y V + P G + +S++Y HI GSPF+ V G
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYS-EMHIPGSPFQFTV-G 466
Query: 2460 PRLVSNHSLHETSSVFVDSLTKVATVPQHATSGPGPADVSKVVAKGLGLSKAYVGQKSNF 2519
P S L V A G GL + VG+ + F
Sbjct: 465 PLRDSGSHL--------------------------------VKAGGSGLERGVVGEPAEF 382
Query: 2520 TVDCSKAGNNMLLVGVHGPRTPCEEILVKHMGSRLYSVSYLLKDKGEYTLVVKWGDEHIP 2579
V +AG L + V GP E + GS VSY + + GEY + +K+ D HIP
Sbjct: 381 NVWTREAGGGSLAISVEGPSKADIEFKDRKDGS--CDVSYKVTEPGEYRVGLKFNDRHIP 208
Query: 2580 GSPYRIMV 2587
SP+++ +
Sbjct: 207 DSPFKVYI 184
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Frame = -1
Query: 293 VEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFEVYVDKSQG 352
V P+ E+A++ D +SV +VP+ G H V+V ++ HI SPF+ V +
Sbjct: 627 VTSPSNVTEDAEIQEIEDG--LYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRD 454
Query: 353 DASK-VTAQGPGLEPSGNIANKTTYFEIFTAGAGMGEVEVVIQDPTGQKGTVEPQLEARG 411
S V A G GLE + + F ++T AG G + + ++ P+ K +E + R
Sbjct: 453 SGSHLVKAGGSGLER--GVVGEPAEFNVWTREAGGGSLAISVEGPS--KADIE--FKDRK 292
Query: 412 DSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPAACRAIGRGLQ--PKG-V 468
D + SY+ T G + V + F IP SP+ V + +P A A +Q P+G +
Sbjct: 291 DGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYI----SPDAGDAHKLEVQQFPQGNI 124
Query: 469 RVKETADFKVYTKGAGSGELKVTVKGPKG 497
+ F V GA GEL + P G
Sbjct: 123 QADAPYQFMVRKNGA-KGELDAKIVAPSG 40
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = -1
Query: 891 DAVRDVDIIDHHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGVSPSLD----LSK 946
+ D +I + D Y+V ++P + G V+V Y HIP SPF V P D L K
Sbjct: 612 NVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVK 433
Query: 947 IKVSGLGDKVDVGKDQEFTVKSKGAGGQGKVASKIVSPSGAAVPCKVEPGLGADNSVVRF 1006
SGL V VG+ EF V ++ AGG G +A + PS A + K D V +
Sbjct: 432 AGGSGLERGV-VGEPAEFNVWTREAGG-GSLAISVEGPSKADIEFKDRKDGSCD---VSY 268
Query: 1007 VPREEGPYEVEVTYDGVPVPGSPFPL 1032
E G Y V + ++ +P SPF +
Sbjct: 267 KVTEPGEYRVGLKFNDRHIPDSPFKV 190
>29446
Length = 1445
Score = 204 bits (519), Expect = 4e-52, Method: Composition-based stats.
Identities = 101/155 (65%), Positives = 125/155 (80%), Gaps = 3/155 (1%)
Frame = +3
Query: 3 ATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKM 62
+TE++LAEDA WK IQ+NTFTRW NEHL+ V+K IA+L++D SDGLRL+AL+EVLS KK
Sbjct: 957 STERELAEDAQWKIIQKNTFTRWANEHLRTVNKAIADLESDFSDGLRLVALIEVLSGKKF 1136
Query: 63 HRKH-NQRPTFRQMQLENVSVALEFL-DRESIKLVSIDSKAIVDGNLKLILGLIWTLILH 120
KH N+RP FR +LENV++ L+FL D E I++V+IDS IVD LKLILGLIWTLILH
Sbjct: 1137 --KHVNKRPNFRTQKLENVTLTLKFLEDDEGIRIVNIDSTDIVDKKLKLILGLIWTLILH 1310
Query: 121 YSISMPMWDEEEDEEAK-KQTPKQRLLGWIQNKLP 154
YSISMPMW+ EE ++ TPKQRLL WIQ+K+P
Sbjct: 1311 YSISMPMWEGEEPTPSEGGPTPKQRLLNWIQSKVP 1415
>19277
Length = 511
Score = 178 bits (451), Expect(2) = 1e-49, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 104/131 (79%), Gaps = 2/131 (1%)
Frame = +2
Query: 1980 ISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLE 2039
+ +SE+G+AS+V+VSG GL EG E EF++DTR+AGYGG+SLSIEGPSK DI D E
Sbjct: 77 VGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNE 256
Query: 2040 DGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGE--GRVKESITRRRRAPSVANI 2097
DGTCRVTY PTEPG YIINIKFADQHVPGSP+SVK+ GE ++ E ITR + A V ++
Sbjct: 257 DGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTKITERITRHKAAADVTHV 436
Query: 2098 GSHCDLSLKIP 2108
GS C+LSLKIP
Sbjct: 437 GSQCELSLKIP 469
Score = 39.7 bits (91), Expect(2) = 1e-49, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +1
Query: 1954 PKETGEHLVHVKKNGQHVASSPIPV 1978
P+ETGEHLV+V +NG+H+A+SP +
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKI 75
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Frame = +2
Query: 1805 NCGHITAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTCSVS 1864
N + G GLT G+ N+ F V+T++AG GG+SL+IEGPSKA+I C DN+DGTC V+
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRVT 277
Query: 1865 YLPVLPGDYSILVKYNDQHIPGSPFTARVTGDDSMRMSH--LKVGSAADIPINISETDLS 1922
Y P PG Y I +K+ DQH+PGSP++ ++ G+ S +++ + +AAD+ S+ +LS
Sbjct: 278 YKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTKITERITRHKAAADVTHVGSQCELS 457
Query: 1923 L 1923
L
Sbjct: 458 L 460
Score = 88.2 bits (217), Expect(2) = 1e-19, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%)
Frame = +2
Query: 2170 TVGPLGEGGAHKVRAGGPGLERAEAGVPAEFGIWTREAGAGGLAIAVEGPSKAEISFEDR 2229
+VG G A KV+ G GL A EF + TREAG GG+++++EGPSKA+I D
Sbjct: 74 SVGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDN 253
Query: 2230 KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 2266
+DG+C V Y EPG Y +++KF ++H+P SP+ V +
Sbjct: 254 EDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 28.9 bits (63), Expect(2) = 1e-19, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 2145 PAEMGMHTVSVKYKGQHVPGSPFQFTVG 2172
P E G H V+V G+H+ SPF+ G
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKICRG 84
Score = 90.1 bits (222), Expect(2) = 2e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 52/87 (59%)
Frame = +2
Query: 1041 SKVKAFGPGLQGGNAGSPARFTIDTKXXXXXXXXXXVEGPCEAQLECLDNGDGTCSVSYV 1100
SKVK G GL G A F +DT+ +EGP +A +EC DN DGTC V+Y
Sbjct: 104 SKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRVTYK 283
Query: 1101 PTEPGDYNINILFADTHIPGSPFKAHV 1127
PTEPG Y INI FAD H+PGSP+ +
Sbjct: 284 PTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 22.7 bits (47), Expect(2) = 2e-18, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 1008 PREEGPYEVEVTYDGVPVPGSPFPL 1032
PRE G + V V +G + SPF +
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKI 75
Score = 73.6 bits (179), Expect(2) = 2e-17, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +2
Query: 2368 GDPGLVSAYGAGLEGGVTGSPAEFIVNTSNAGAGALSVTIDGPSKVKMDCQECPEGY-RV 2426
G+ V G GL G+ EF+V+T AG G +S++I+GPSK ++C + +G RV
Sbjct: 95 GNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRV 274
Query: 2427 TYTPMAPGSYLISIKYGGPYHIGGSPFKAKVTG 2459
TY P PG+Y+I+IK+ H+ GSP+ K+ G
Sbjct: 275 TYKPTEPGTYIINIKF-ADQHVPGSPYSVKIGG 370
Score = 36.2 bits (82), Expect(2) = 2e-17, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 2335 PRENGIYLIDVKFNGTHIPGSPFKIRVGE 2363
PRE G +L++V NG HI SPFKI GE
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKICRGE 87
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = +2
Query: 1327 DPSRVRVHGPGIQSGTTNKPNKFTXXXXXXXXXXXXXXXXXPSEAKMSCMDNKDGSCSVE 1386
+ S+V+V G G+ G N+ N+F PS+A + C DN+DG+C V
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRVT 277
Query: 1387 YIPYEAGTYSLNVTYGGHQVPGSPFKVPV 1415
Y P E GTY +N+ + VPGSP+ V +
Sbjct: 278 YKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%)
Frame = +2
Query: 1417 DVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNA 1476
++ +ASKVK SG GL+ GM AN F VDT +AG + + ++GP ++ DN
Sbjct: 89 ELGNASKVKVSGDGLTEGM--ANEVNEFVVDTREAGYGGMSLSIEGPSKA--DIECHDNE 256
Query: 1477 DGTQTVNYVPSREGSYSISVLYGEEEVPRSPFKVKV 1512
DGT V Y P+ G+Y I++ + ++ VP SP+ VK+
Sbjct: 257 DGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Frame = +2
Query: 545 TECGN-QKVRAWGPGLEGGIVGKSADFVVEAIGDDVGTLGFSVEGPSQAKIECDDKGDGS 603
+E GN KV+ G GL G+ + +FVV+ G + S+EGPS+A IEC D DG+
Sbjct: 86 SELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGT 265
Query: 604 CDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREAPQDFHPDRVKARGPGLEKTGVAVN 663
C V Y P E G Y +++ + + SP+ I P +R+ + T V
Sbjct: 266 CRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTKITERITRHKAAADVTHVG-- 439
Query: 664 KPAEFTVDAKHAGKAPL 680
++ + K G +PL
Sbjct: 440 --SQCELSLKIPGTSPL 484
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%)
Frame = +2
Query: 1132 DASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQDHGDGTHT 1191
+ASKVK SG GL A EV +F VD AG +++ I E A++ D+ DGT
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSI--EGPSKADIECHDNEDGTCR 271
Query: 1192 ITYIPLCPGAYTVTIKYGGQPVPNFPSKLQV 1222
+TY P PG Y + IK+ Q VP P +++
Sbjct: 272 VTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +2
Query: 1517 DASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNHDGT 1576
+ASKVK SG GL T G+ A+ EF +D ++AG G +++ I P + H DN DGT
Sbjct: 98 NASKVKVSGDGL-TEGM-ANEVNEFVVDTREAGYGGMSLSIEGPSKADIECH--DNEDGT 265
Query: 1577 YTVAYVPDVPGRYTILIKYGGDEIPFSPYRVR 1608
V Y P PG Y I IK+ +P SPY V+
Sbjct: 266 CRVTYKPTEPGTYIINIKFADQHVPGSPYSVK 361
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Frame = +2
Query: 830 TPTSPIRVKVEPSH-DASKVKAEGPGLNRTGVELGKPTHFTVNAKTAGKGKLDVQFSGLA 888
+PT+P R E +ASKVK G GL T + F V+ + AG G + + G +
Sbjct: 53 SPTAPSRSVGESELGNASKVKVSGDGL--TEGMANEVNEFVVDTREAGYGGMSLSIEGPS 226
Query: 889 KGDAVRDVDIIDHHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSV--GVSPSLDLSK 946
K D ++ D+ D T V Y P + G +N+ + H+P SP+SV G PS +++
Sbjct: 227 KAD----IECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTKITE 394
Query: 947 --IKVSGLGDKVDVGKDQEFTVKSKG 970
+ D VG E ++K G
Sbjct: 395 RITRHKAAADVTHVGSQCELSLKIPG 472
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = +2
Query: 352 GDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGMGEVEVVIQDPTGQKGTVEPQLEARG 411
G+ASKV G GL + +AN+ F + T AG G + + I+ P+ K +E
Sbjct: 95 GNASKVKVSGDGL--TEGMANEVNEFVVDTREAGYGGMSLSIEGPS--KADIE--CHDNE 256
Query: 412 DSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVG 448
D T R +Y+PT G + +++ FA +P SPY+V +G
Sbjct: 257 DGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIG 367
Score = 47.4 bits (111), Expect(2) = 4e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +2
Query: 2271 GDARRLTVSSLQESGLKVNQPASFAVSLNGA-KGAIDAKVHSPSGALEECYVTEIDQDKY 2329
G+A ++ VS + N+ F V A G + + PS A EC+ E
Sbjct: 95 GNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNE--DGTC 268
Query: 2330 AVRFIPRENGIYLIDVKFNGTHIPGSPFKIRVG 2362
V + P E G Y+I++KF H+PGSP+ +++G
Sbjct: 269 RVTYKPTEPGTYIINIKFADQHVPGSPYSVKIG 367
Score = 23.5 bits (49), Expect(2) = 4e-06, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 2241 QEPGDYEVSVKFNEEHIPDSPFVV 2264
+E G++ V+V N +HI +SPF +
Sbjct: 4 RETGEHLVNVYRNGKHIANSPFKI 75
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%)
Frame = +2
Query: 253 NPKKARAYGPGIEPTGNMVKKRAEFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKN 312
N K + G G+ T M + EF V+TR AG G + + +E P+ +A + +++++
Sbjct: 98 NASKVKVSGDGL--TEGMANEVNEFVVDTREAGYGGMSLSIEGPS----KADIECHDNED 259
Query: 313 RTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFEVYV 347
T V Y P GT+ + + FA QH+ SP+ V +
Sbjct: 260 GTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%)
Frame = +2
Query: 452 NPAACRAIGRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEERVKQKDLGDGVY 511
N + + G GL +G+ E +F V T+ AG G + ++++GP + ++ D DG
Sbjct: 98 NASKVKVSGDGLT-EGM-ANEVNEFVVDTREAGYGGMSLSIEGPSKAD-IECHDNEDGTC 268
Query: 512 GFEYYPTIPGTYTVTITWGGQNIGRSPFEVKVGTE 546
Y PT PGTY + I + Q++ SP+ VK+G E
Sbjct: 269 RVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGE 373
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%)
Frame = +2
Query: 2484 TVPQHATSGPGPADVSKVVAKGLGLSKAYVGQKSNFTVDCSKAGNNMLLVGVHGPRTPCE 2543
T P + + SKV G GL++ + + F VD +AG + + + GP
Sbjct: 59 TAPSRSVGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADI 238
Query: 2544 EILVKHMGSRLYSVSYLLKDKGEYTLVVKWGDEHIPGSPYRIMV 2587
E G+ V+Y + G Y + +K+ D+H+PGSPY + +
Sbjct: 239 ECHDNEDGT--CRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Frame = +2
Query: 728 PNSPFRVNVGAGSHPN--KVKVYGPGVAKTGLKAHEPTYFTVDCTEAGQGDVSIGIKCAP 785
P +P R +VG N KVKV G G+ + G+ A+E F VD EAG G +S+ I+
Sbjct: 56 PTAPSR-SVGESELGNASKVKVSGDGLTE-GM-ANEVNEFVVDTREAGYGGMSLSIE--- 217
Query: 786 GVVGPTEAXXXXXXXXXXXXTFTVKYTPCGAGSYTIMVLFADQATPTSPIRVKV--EPS 842
GP++A T V Y P G+Y I + FADQ P SP VK+ EPS
Sbjct: 218 ---GPSKADIECHDNEDG--TCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPS 379
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +2
Query: 1647 VDTKAAGKGKVTCTVCTPDGSXXXXXXXXXXXGTFDIFYTAPQPGKYVICVRFGGEHVPN 1706
VDT+ AG G ++ ++ P S GT + Y +PG Y+I ++F +HVP
Sbjct: 170 VDTREAGYGGMSLSIEGP--SKADIECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPG 343
Query: 1707 SPFQVTIPERP 1717
SP+ V I P
Sbjct: 344 SPYSVKIGGEP 376
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 1763 DNKDGTVTVRYSPSEAGLHEMDIRYDNMHIPGSPLQFYV 1801
DN+DGT V Y P+E G + ++I++ + H+PGSP +
Sbjct: 248 DNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 37.4 bits (85), Expect(2) = 0.003, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +2
Query: 935 SVGVSPSLDLSKIKVSGLGDKVDVGKD-QEFTVKSKGAGGQGKVASKIVSPSGAAVPCKV 993
SVG S + SK+KVSG G + + EF V ++ A G G ++ I PS A + C
Sbjct: 74 SVGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREA-GYGGMSLSIEGPSKADIECH- 247
Query: 994 EPGLGADNS----VVRFVPREEGPYEVEVTYDGVPVPGSPFPLE 1033
DN V + P E G Y + + + VPGSP+ ++
Sbjct: 248 ------DNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVK 361
Score = 23.5 bits (49), Expect(2) = 0.003, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 912 PVQQGPVGVNVTYGGDHIPKSPFSV 936
P + G VNV G HI SPF +
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKI 75
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 2115 MTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQFTVG 2172
M+ + PS + E + E+ T + + P E G + +++K+ QHVPGSP+ +G
Sbjct: 200 MSLSIEGPSKA--DIECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIG 367
Score = 32.3 bits (72), Expect = 2.3, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 321 PEVTGTHKVTVLFAGQHIAKSPFEVYVDKSQGDASKVTAQGPGL 364
P TG H V V G+HIA SPF++ +G+ + QG GL
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKI----CRGERTWQCQQGQGL 120
>21436
Length = 546
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 120/186 (64%), Gaps = 3/186 (1%)
Frame = -1
Query: 699 NGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLK 758
N +GTY+C Y+P +PVKHT V++GGV++PNSPFRV+V S P+KVK+ GPGV G+K
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTN-GIK 370
Query: 759 AHEPTYFTVDCTEAGQGDVSIGIKCAPGVVGPTEAXXXXXXXXXXXXTFTVKYTPCGAGS 818
PTYFTVDC +AG GDV++G+ G+ P + TFTV+Y P G+
Sbjct: 369 TMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKT------TGNQDGTFTVEYEPKLPGT 208
Query: 819 YTIMVLFADQATPTSPIRVKVEPSHDASKVKAEGPGLNRTGVELGKPTHFTVNAKT---A 875
YT+MV FAD P+SP++VKVEP+ D S ++ +G +R +E P+ F V+A
Sbjct: 207 YTVMVYFADVEVPSSPVKVKVEPNIDVSSIRVDGLD-SRVFIE--APSEFVVDASVLDPK 37
Query: 876 GKGKLD 881
G+G+++
Sbjct: 36 GQGEVE 19
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 1/185 (0%)
Frame = -1
Query: 1090 NGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVAPCFDASKVKCSGPGLERAT-A 1148
N DGT + Y+P P + +++ F +P SPF+ HVA D SKVK SGPG+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1149 GEVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKY 1208
F VDC AG ++ + + G+ V + DGT T+ Y P PG YTV + +
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1209 GGQPVPNFPSKLQVEPAVDTSGVQCYGPGIEGQGVFREATTEFSVDARALTQTGGPHVKA 1268
VP+ P K++VEP +D S ++ G++ + VF EA +EF VDA L G V+A
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIRV--DGLDSR-VFIEAPSEFVVDASVLDPKGQGEVEA 16
Query: 1269 RVANP 1273
+ P
Sbjct: 15 ILTTP 1
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Frame = -1
Query: 1378 NKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVHDVTDASKVKCSGPGLSPGMVR 1437
N+DG+ + Y+P ++++V +GG VP SPF+V V + +D SKVK SGPG++ G ++
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNG-IK 370
Query: 1438 ANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNADGTQTVNYVPSREGSYSISVL 1497
P F VD +AG + V + +G+ PV N DGT TV Y P G+Y++ V
Sbjct: 369 TMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVY 190
Query: 1498 YGEEEVPRSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAK---DAGEGLLA 1554
+ + EVP SP KVKV P D S ++ GL++ V P EF +DA G+G +
Sbjct: 189 FADVEVPSSPVKVKVEPNIDVSSIRVD--GLDSR-VFIEAPSEFVVDASVLDPKGQGEVE 19
Query: 1555 VQITDP 1560
+T P
Sbjct: 18 AILTTP 1
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 82/146 (56%)
Frame = -1
Query: 1475 NADGTQTVNYVPSREGSYSISVLYGEEEVPRSPFKVKVLPTHDASKVKASGPGLNTTGVP 1534
N DGT Y+P R +++SV +G VP SPF+V V D SKVK SGPG+ T G+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGV-TNGIK 370
Query: 1535 ASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAYVPDVPGRYTILIK 1594
P FT+D K AG G +AV +TD G N DGT+TV Y P +PG YT+++
Sbjct: 369 TMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVY 190
Query: 1595 YGGDEIPFSPYRVRAVPTGDASKCTV 1620
+ E+P SP +V+ P D S V
Sbjct: 189 FADVEVPSSPVKVKVEPNIDVSSIRV 112
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Frame = -1
Query: 806 TFTVKYTPCGAGSYTIMVLFADQATPTSPIRVKVEPSHDASKVKAEGPGLNRTGVELGKP 865
T+ +Y P +T+ V F A P SP RV V D SKVK GPG+ G++ P
Sbjct: 534 TYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTN-GIKTMSP 358
Query: 866 THFTVNAKTAGKGKLDVQFSGLAKGDAVR-DVDIIDHHDNTYTVKYIPVQQGPVGVNVTY 924
T+FTV+ K AG G + V GL G + V + D T+TV+Y P G V V +
Sbjct: 357 TYFTVDCKQAGPGDVAV---GLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 925 GGDHIPKSPFSVGVSPSLDLSKIKVSGLGDKVDVGKDQEFTVKSK--GAGGQGKVASKIV 982
+P SP V V P++D+S I+V GL +V + EF V + GQG+V + +
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIRVDGLDSRVFIEAPSEFVVDASVLDPKGQGEVEAILT 7
Query: 983 SP 984
+P
Sbjct: 6 TP 1
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Frame = -1
Query: 1005 RFVPREEGPYEVEVTYDGVPVPGSPFPLEAVAPTKPSKVKAFGPGLQGG-NAGSPARFTI 1063
R++P + V V + GV VP SPF + P+ PSKVK GPG+ G SP FT+
Sbjct: 522 RYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKTMSPTYFTV 343
Query: 1064 DTKXXXXXXXXXXVEG--PCEAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGS 1121
D K + + ++ N DGT +V Y P PG Y + + FAD +P S
Sbjct: 342 DCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFADVEVPSS 163
Query: 1122 PFKAHVAPCFDASKVKCSGPGLERATAGEVGQFQVDCS 1159
P K V P D S ++ G R +F VD S
Sbjct: 162 PVKVKVEPNIDVSSIRVDGLD-SRVFIEAPSEFVVDAS 52
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Frame = -1
Query: 412 DSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPAACRAIGRGLQPKGVRVK 471
D TY C Y P HTV V F GV +P SP+ V V + +P+ + G G+ G++
Sbjct: 540 DGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVT-NGIKTM 364
Query: 472 ETADFKVYTKGAGSGELKVTVKGPKGEER-VKQKDLGDGVYGFEYYPTIPGTYTVTITWG 530
F V K AG G++ V + +G + VK DG + EY P +PGTYTV + +
Sbjct: 363 SPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFA 184
Query: 531 GQNIGRSPFEVKVGTECGNQKVRAWGPGLEGGI-VGKSADFVVEA 574
+ SP +VKV +R GL+ + + ++FVV+A
Sbjct: 183 DVEVPSSPVKVKVEPNIDVSSIRVD--GLDSRVFIEAPSEFVVDA 55
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Frame = -1
Query: 1764 NKDGTVTVRYSPSEAGLHEMDIRYDNMHIPGSPLQFYV-DYVNCGHITAYGPGLTHGV-V 1821
N+DGT RY P H + + + + +P SP + +V + + + GPG+T+G+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1822 NKPATFTVNTKDAGEGGLSLAIEGPSKAEI--SCTDNQDGTCSVSYLPVLPGDYSILVKY 1879
P FTV+ K AG G +++ + ++ T NQDGT +V Y P LPG Y+++V +
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1880 NDQHIPGSPFTARVTGDDSMRMSHLKVGSAADIPINISETDLSLLTATVVPPSGREE 1936
D +P SP +V + ++ +S ++V D + I ++ A+V+ P G+ E
Sbjct: 186 ADVEVPSSPVKVKV--EPNIDVSSIRV-DGLDSRVFIEAPSEFVVDASVLDPKGQGE 25
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Frame = -1
Query: 601 DGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREAPQDFHPDRVKARGPGLEKTGV 660
DG+ RY P ++ V V + SPF + E P D P +VK GPG+ G+
Sbjct: 540 DGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAE-PSD--PSKVKISGPGVTN-GI 373
Query: 661 AVNKPAEFTVDAKHAGKAPLRVQVQDNEGCSVEATVKDNGNGTYSCSYVPRKPVKHTAMV 720
P FTVD K AG + V + D G V N +GT++ Y P+ P +T MV
Sbjct: 372 KTMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMV 193
Query: 721 SWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLKAHEPTYFTVDCT---EAGQGDV 777
+ V +P+SP +V V + ++V G + + P+ F VD + GQG+V
Sbjct: 192 YFADVEVPSSPVKVKVEPNIDVSSIRVDG---LDSRVFIEAPSEFVVDASVLDPKGQGEV 22
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Frame = -1
Query: 1944 RNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEG-H 2002
R+G ++P +H V V G V +SP V ++ E D S+V++SG G+ G
Sbjct: 543 RDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVA--EPSDPSKVKISGPGVTNGIK 370
Query: 2003 TFEPAEFIIDTRDAGYGGLSLSIEGPSKVDI--NTEDLEDGTCRVTYCPTEPGNYIINIK 2060
T P F +D + AG G +++ + +D+ T +DGT V Y P PG Y + +
Sbjct: 369 TMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVY 190
Query: 2061 FADQHVPGSPFSVKV 2075
FAD VP SP VKV
Sbjct: 189 FADVEVPSSPVKVKV 145
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%)
Frame = -1
Query: 310 DKNRTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFEVYVDKSQGDASKVTAQGPGLEPSGN 369
+++ T++ Y+P H V+V F G + SPF V+V + D SKV GPG+ +G
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPS-DPSKVKISGPGVT-NGI 373
Query: 370 IANKTTYFEIFTAGAGMGEVEVVIQDPTGQKGTVEPQLEARGDSTYRCSYQPTMEGVHTV 429
TYF + AG G+V V + D G+ V + D T+ Y+P + G +TV
Sbjct: 372 KTMSPTYFTVDCKQAGPGDVAVGLTD--GRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTV 199
Query: 430 HVTFAGVPIPRSPYTVTVGQACNPAACRAIGRGLQPKGVRVKETADFKVYTKGAGSGELK 489
V FA V +P SP V V + ++ R G D +V+ + +
Sbjct: 198 MVYFADVEVPSSPVKVKVEPNIDVSSIRVDG-------------LDSRVFIEAPSEFVVD 58
Query: 490 VTVKGPKGEERVK 502
+V PKG+ V+
Sbjct: 57 ASVLDPKGQGEVE 19
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%)
Frame = -1
Query: 1572 NHDGTYTVAYVPDVPGRYTILIKYGGDEIPFSPYRVRAVPTGDASKCTVTVSIXXXXXXX 1631
N DGTY Y+P P ++T+ + +GG +P SP+RV D SK ++
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKIS--------GP 391
Query: 1632 XXXPTIQIGEETVITVDTKAAGKGKVTCTVCTPDGSXXXXXXXXXXXGTFDIFYTAPQPG 1691
I+ T TVD K AG G V + G GTF + Y PG
Sbjct: 390 GVTNGIKTMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPG 211
Query: 1692 KYVICVRFGGEHVPNSPFQVTIPERPMVGVNGLDVTSL 1729
Y + V F VP+SP +V + P + V+ + V L
Sbjct: 210 TYTVMVYFADVEVPSSPVKVKV--EPNIDVSSIRVDGL 103
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 3/183 (1%)
Frame = -1
Query: 2138 TYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERA-EAGV 2196
TY R++P HTVSV + G VP SPF+ V + KV+ GPG+ +
Sbjct: 534 TYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSD--PSKVKISGPGVTNGIKTMS 361
Query: 2197 PAEFGIWTREAGAGGLAIAVEGPSKAEISFED--RKDGSCGVAYVVQEPGDYEVSVKFNE 2254
P F + ++AG G +A+ + ++ + +DG+ V Y + PG Y V V F +
Sbjct: 360 PTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFAD 181
Query: 2255 EHIPDSPFVVPVASPSGDARRLTVSSLQESGLKVNQPASFAVSLNGAKGAIDAKVHSPSG 2314
+P SP V V P+ D + V L +S + + P+ F V DA V P G
Sbjct: 180 VEVPSSPVKVKV-EPNIDVSSIRVDGL-DSRVFIEAPSEFVV---------DASVLDPKG 34
Query: 2315 ALE 2317
E
Sbjct: 33 QGE 25
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
Frame = -1
Query: 1287 DGTYKVEYTPYEEGVHSVDVTYDGXXXXXXXXXXXXTEGCDPSRVRVHGPGIQSGT-TNK 1345
DGTY Y P H+V V + G E DPS+V++ GPG+ +G T
Sbjct: 540 DGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKTMS 361
Query: 1346 PNKFTXXXXXX--XXXXXXXXXXXPSEAKMSCMDNKDGSCSVEYIPYEAGTYSLNVTYGG 1403
P FT + + N+DG+ +VEY P GTY++ V +
Sbjct: 360 PTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFAD 181
Query: 1404 HQVPGSPFKVPVHDVTDASKVKCSGPGLSPGMVRANLPQSFQVDTS 1449
+VP SP KV V D S ++ G V P F VD S
Sbjct: 180 VEVPSSPVKVKVEPNIDVSSIRVDG---LDSRVFIEAPSEFVVDAS 52
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Frame = -1
Query: 2329 YAVRFIPRENGIYLIDVKFNGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAGLEGGV-TGS 2387
YA R++P + + V F G +P SPF++ V EP DP V G G+ G+ T S
Sbjct: 531 YACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPS---DPSKVKISGPGVTNGIKTMS 361
Query: 2388 PAEFIVNTSNAGAGALSVTI-DGPSKVKMDCQECPEG-----YRVTYTPMAPGSYLISIK 2441
P F V+ AG G ++V + DG MD G + V Y P PG+Y + +
Sbjct: 360 PTYFTVDCKQAGPGDVAVGLTDGRG---MDVPVKTTGNQDGTFTVEYEPKLPGTYTVMV- 193
Query: 2442 YGGPYHIGGSPFKAKVTGPRLVSNHSLHETSSVFVDSL 2479
Y + SP K KV P + + SS+ VD L
Sbjct: 192 YFADVEVPSSPVKVKVE-PNI-------DVSSIRVDGL 103
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Frame = -1
Query: 901 HHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGVSPSLDLSKIKVSGLG--DKVDV 958
+ D TY +Y+P++ V+V +GG +P SPF V V+ D SK+K+SG G + +
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 959 GKDQEFTVKSKGAGGQGKVASKIVSPSGAAVPCKVEPGLGADNSVVRFVPREEGPYEVEV 1018
FTV K A G G VA + G VP K G V + P+ G Y V V
Sbjct: 366 MSPTYFTVDCKQA-GPGDVAVGLTDGRGMDVPVKTT-GNQDGTFTVEYEPKLPGTYTVMV 193
Query: 1019 TYDGVPVPGSP 1029
+ V VP SP
Sbjct: 192 YFADVEVPSSP 160
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Frame = -1
Query: 2230 KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASPSGDARRLTVSSLQESGLKVN 2289
+DG+ Y+ P + VSV F +P+SPF V VA PS ++ +G+K
Sbjct: 543 RDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKTM 364
Query: 2290 QPASFAVSLNGAKGAIDAKVHSPSG-ALEECYVTEIDQD-KYAVRFIPRENGIYLIDVKF 2347
P F V A G D V G ++ T +QD + V + P+ G Y + V F
Sbjct: 363 SPTYFTVDCKQA-GPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 2348 NGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAGLEGGV-TGSPAEFIVNTS 2396
+P SP K++V EP + + S GL+ V +P+EF+V+ S
Sbjct: 186 ADVEVPSSPVKVKV-EP----NIDVSSIRVDGLDSRVFIEAPSEFVVDAS 52
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Frame = -1
Query: 1679 GTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTI--PERP-MVGVNGLDVTSLRPFDLV 1735
GT+ Y +P K+ + V FGG VPNSPF+V + P P V ++G VT+
Sbjct: 537 GTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKTMSP 358
Query: 1736 IPFTIK-----KGEITGEVRMPSGKVAQPSITDNKDGTVTVRYSPSEAGLHEMDIRYDNM 1790
FT+ G++ + G T N+DGT TV Y P G + + + + ++
Sbjct: 357 TYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFADV 178
Query: 1791 HIPGSPLQFYVD 1802
+P SP++ V+
Sbjct: 177 EVPSSPVKVKVE 142
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Frame = -1
Query: 2424 YRVTYTPMAPGSYLISIKYGGPYHIGGSPFKAKVTGPRLVSNHSLHETSSVFVDSLTKVA 2483
Y Y P+ P + +S+ +GG + SPF+ V P S +
Sbjct: 531 YACRYMPLRPVKHTVSVNFGG-VAVPNSPFRVHVAEPSDPSKVKI--------------- 400
Query: 2484 TVPQHATSGPGPADVSKVVAKGLG-LSKAYVGQKSNFTVDCSKAGNNMLLVGVHGPRTPC 2542
SGPG V G+ +S Y FTVDC +AG + VG+ R
Sbjct: 399 -------SGPG-------VTNGIKTMSPTY------FTVDCKQAGPGDVAVGLTDGR--G 286
Query: 2543 EEILVKHMGSR--LYSVSYLLKDKGEYTLVVKWGDEHIPGSPYRIMV 2587
++ VK G++ ++V Y K G YT++V + D +P SP ++ V
Sbjct: 285 MDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFADVEVPSSPVKVKV 145
>19002
Length = 842
Score = 102 bits (255), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Frame = -2
Query: 46 DGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDG 105
DG L+ LLEV + ++ + + R LENV AL FL + + L ++ + IVDG
Sbjct: 841 DGKMLMKLLEVRVRGEI--ASDXKGKMRIHCLENVDKALTFLHEQRVHLENMGAHDIVDG 668
Query: 106 NLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNK---LPQLPITNFS 162
+ +L LGLIWT+IL + I M +E ++ E K + K LL W Q K P + + NF+
Sbjct: 667 SSRLTLGLIWTIILRFQIQDIMIEEVDNSETK--SAKDALLLWCQMKTAGYPNVNVRNFT 494
Query: 163 RDWQSGRALGALVDSCAPGLCPDWDSWDASKPVNNAREAMQQADDWLGIPQVITPEEIVD 222
W+ G A A++ P L +D S + N + A A+D LG+ ++ PE++
Sbjct: 493 TSWRDGLAFNAIIHKHRPDLV-QYDRLHKSSAIQNLQNAFTVAEDKLGLTALLEPEDVNV 317
Query: 223 PNVDEHSVMTYLSQF 237
DE S++TY+ +
Sbjct: 316 EYPDEKSIITYVVTY 272
>27230
Length = 583
Score = 58.2 bits (139), Expect(2) = 6e-17, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = -2
Query: 1368 PSEAKMSCMDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFK---VPVHDVTDASKV 1424
P ++K++C++ DG+ +V YIP G Y + V++G VPGSPF P D S +
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSI 340
Query: 1425 KCSGPGLSPGMVRANLPQSFQVDTS 1449
SG G+SP V P F VD S
Sbjct: 339 TASGYGISPEGVFIEAPSEFVVDAS 265
Score = 50.1 bits (118), Expect(2) = 6e-17, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = -1
Query: 1472 VVDNA-DGTQTVNYVPSREGSYSISVLYGEEEVPRSPFKVKVLPTHDASKVKASGPGL 1528
+VDN DGT V Y P EG S+ V Y +P SPF+V + +DA++V+A GPGL
Sbjct: 190 LVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYGPGL 17
Score = 55.8 bits (133), Expect(2) = 1e-16, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = -2
Query: 589 PSQAKIECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREAPQDFHPD-- 646
P ++KI C + DG+ +V Y P+ GEY V V + + SPF A I P + PD
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALI--TPSELDPDVS 346
Query: 647 RVKARGPGLEKTGVAVNKPAEFTVDA 672
+ A G G+ GV + P+EF VDA
Sbjct: 345 SITASGYGISPEGVFIEAPSEFVVDA 268
Score = 50.8 bits (120), Expect(2) = 1e-16, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = -1
Query: 689 GCSVEATVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVKVY 748
G ++ V + +GTY Y P + + V++ G+ IP SPF+VN AG N+V+ Y
Sbjct: 208 GRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAY 29
Query: 749 GPGV 752
GPG+
Sbjct: 28 GPGL 17
Score = 68.9 bits (167), Expect(2) = 2e-16, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = -1
Query: 973 GQGKVASKIVSPSGAAVPCKVEPGLGADNSVVRFVPREEGPYEVEVTYDGVPVPGSPFPL 1032
GQG+V + + +PSG + V+ + V + P EEGP ++VTY G+P+PGSPF +
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVD-NMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQV 71
Query: 1033 EAVAPTKPSKVKAFGPGLQGG 1053
AVA ++V+A+GPGL+GG
Sbjct: 70 NAVAGYDANRVRAYGPGLEGG 8
Score = 37.0 bits (84), Expect(2) = 2e-16, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = -2
Query: 896 VDIIDHHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGVSPSL---DLSKIKVSGL 952
++ ++ D T V YIP G V V++G +P SPF+ ++PS D+S I SG
Sbjct: 504 INCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGY 325
Query: 953 G---DKVDVGKDQEFTVKSK 969
G + V + EF V +
Sbjct: 324 GISPEGVFIEAPSEFVVDAS 265
Score = 55.5 bits (132), Expect(2) = 7e-15, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Frame = -2
Query: 1470 VDVVDNADGTQTVNYVPSREGSYSISVLYGEEEVPRSPFKVKVLPTH---DASKVKASGP 1526
++ V+ DGT V Y+P G Y + V +G++ VP SPF + P+ D S + ASG
Sbjct: 504 INCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGY 325
Query: 1527 GLNTTGVPASLPVEFTIDA------KDAGEGLLA 1554
G++ GV P EF +DA KD G L+
Sbjct: 324 GISPEGVFIEAPSEFVVDASVLDP*KDKGRWRLS 223
Score = 45.4 bits (106), Expect(2) = 7e-15, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = -1
Query: 1549 GEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAYVPDVPGRYTILIKYGGDEIPFSPYRVR 1608
G+G + +T P G+ +T + + DGTY V Y P G ++ + Y G IP SP++V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1609 AVPTGDASKC 1618
AV DA++
Sbjct: 67 AVAGYDANRV 38
Score = 52.4 bits (124), Expect(2) = 1e-14, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = -2
Query: 1080 PCEAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVAPCF---DASKV 1136
P ++++ C++ DGT +V+Y+P PG+Y + + D +PGSPF A + P D S +
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSI 340
Query: 1137 KCSGPGL--ERATAGEVGQFQVDCS 1159
SG G+ E +F VD S
Sbjct: 339 TASGYGISPEGVFIEAPSEFVVDAS 265
Score = 47.4 bits (111), Expect(2) = 1e-14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Frame = -1
Query: 1162 GSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQ 1221
G E+ + + +G + + + DGT+ + Y P+ G ++ + Y G P+P P ++
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1222 VEPAVDTSGVQCYGPGIEG 1240
D + V+ YGPG+EG
Sbjct: 67 AVAGYDANRVRAYGPGLEG 11
Score = 54.3 bits (129), Expect(2) = 1e-13, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = -1
Query: 385 GMGEVEVVIQDPTGQKGTVEPQLEARGDSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYT 444
G GEVE ++ P+G+K ++ ++ D TY Y P EG ++ VT+ G+PIP SP+
Sbjct: 247 GQGEVEAILTTPSGRK--LQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQ 74
Query: 445 VTVGQACNPAACRAIGRGLQ 464
V + RA G GL+
Sbjct: 73 VNAVAGYDANRVRAYGPGLE 14
Score = 42.4 bits (98), Expect(2) = 1e-13, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 301 EEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFEVYVDKSQ--GDASKVT 358
E++K+ N + T +V Y+PE G +KV V + + SPF + S+ D S +T
Sbjct: 516 EKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSIT 337
Query: 359 AQGPGLEPSGNIANKTTYF 377
A G G+ P G + F
Sbjct: 336 ASGYGISPEGVFIEAPSEF 280
Score = 44.3 bits (103), Expect(2) = 8e-10, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = -1
Query: 900 DHHDNTYTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGVSPSLDLSKIKVSGLG 953
+ D TY V Y P+++GP ++VTY G IP SPF V D ++++ G G
Sbjct: 181 NMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYGPG 20
Score = 39.7 bits (91), Expect(2) = 8e-10, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -2
Query: 806 TFTVKYTPCGAGSYTIMVLFADQATPTSPIRVKVEPSH---DASKVKAEGPGLNRTGVEL 862
T V Y P G Y + V D+ P SP + PS D S + A G G++ GV +
Sbjct: 477 TVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGVFI 298
Query: 863 GKPTHFTVNAK 873
P+ F V+A
Sbjct: 297 EAPSEFVVDAS 265
Score = 47.0 bits (110), Expect(2) = 1e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -1
Query: 484 GSGELKVTVKGPKGEE-RVKQKDLGDGVYGFEYYPTIPGTYTVTITWGGQNIGRSPFEVK 542
G GE++ + P G + + ++ DG Y Y P G ++ +T+ G I SPF+V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 543 VGTECGNQKVRAWGPGLEGGI 563
+VRA+GPGLEGG+
Sbjct: 67 AVAGYDANRVRAYGPGLEGGL 5
Score = 36.6 bits (83), Expect(2) = 1e-09, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -2
Query: 412 DSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQA-CNP--AACRAIGRGLQPKGV 468
D T +Y P G + V V+ P+P SP+T + + +P ++ A G G+ P+GV
Sbjct: 483 DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGV 304
Query: 469 RVKETADFKV 478
++ ++F V
Sbjct: 303 FIEAPSEFVV 274
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 53/115 (46%)
Frame = -1
Query: 1229 SGVQCYGPGIEGQGVFREATTEFSVDARALTQTGGPHVKARVANPSGNLTDTYVQDCGDG 1288
SG +C GP ++GQG V+A + PSG T V + DG
Sbjct: 277 SGRECVGP-LKGQG----------------------EVEAILTTPSGRKLQTLVDNMKDG 167
Query: 1289 TYKVEYTPYEEGVHSVDVTYDGXXXXXXXXXXXXTEGCDPSRVRVHGPGIQSGTT 1343
TY V YTP EEG S+DVTY G G D +RVR +GPG++ G T
Sbjct: 166 TYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYGPGLEGGLT 2
Score = 51.2 bits (121), Expect(2) = 4e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = -1
Query: 1080 PCEAQLECL-DN-GDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVAPCFDASKVK 1137
P +L+ L DN DGT V Y P E G ++++ + IPGSPF+ + +DA++V+
Sbjct: 214 PSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVR 35
Query: 1138 CSGPGLE 1144
GPGLE
Sbjct: 34 AYGPGLE 14
Score = 30.0 bits (66), Expect(2) = 4e-09, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Frame = -2
Query: 1004 VRFVPREEGPYEVEVTYDGVPVPGSPFPLEAVAPTKP----SKVKAFGPGL--QGGNAGS 1057
V ++P G Y+V+V++ PVPGSPF + P++ S + A G G+ +G +
Sbjct: 468 VTYIPEFPGEYKVKVSHGDKPVPGSPF-TALITPSELDPDVSSITASGYGISPEGVFIEA 292
Query: 1058 PARFTID 1064
P+ F +D
Sbjct: 291 PSEFVVD 271
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Frame = -1
Query: 2206 EAGAGGLAIAVEGPSKAEISFED--RKDGSCG----VAYVVQEPGD--YEVSVKFNEEHI 2257
E G L IAV+GP K + + R +G C V++ +Q G+ + S + H
Sbjct: 559 ETRVGDLDIAVDGPGKIQDKLRE*XRWNGQCDLHT*VSWGIQGEGEPRGQASTRITL-HC 383
Query: 2258 PDSPFVVPVASP------SGDARRLTVSSLQESGLKVNQPASFAVSLNGAKGAIDAKVHS 2311
P F A P S R +T S+ ++V L G +G ++A + +
Sbjct: 382 PHYTF*---AGP*CQQHNSVWLRNITRGSVH*GTVRVCSGRECVGPLKG-QGEVEAILTT 215
Query: 2312 PSGALEECYVTEIDQDKYAVRFIPRENGIYLIDVKFNGTHIPGSPFKIRVGEPGHGGDPG 2371
PSG + V + Y V + P E G +DV + G IPGSPF++ G D
Sbjct: 214 PSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVA---GYDAN 44
Query: 2372 LVSAYGAGLEGGVT 2385
V AYG GLEGG+T
Sbjct: 43 RVRAYGPGLEGGLT 2
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = -2
Query: 1187 DGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQVEPAV---DTSGVQCYGPGIEGQGV 1243
DGT +TYIP PG Y V + +G +PVP P + P+ D S + G GI +GV
Sbjct: 483 DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGV 304
Query: 1244 FREATTEFSVDARAL 1258
F EA +EF VDA L
Sbjct: 303 FIEAPSEFVVDASVL 259
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -1
Query: 1742 KGEITGEVRMPSGKVAQPSITDNKDGTVTVRYSPSEAGLHEMDIRYDNMHIPGSPLQF-Y 1800
+GE+ + PSG+ Q + + KDGT V Y+P E G +D+ Y + IPGSP Q
Sbjct: 244 QGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNA 65
Query: 1801 VDYVNCGHITAYGPGLTHGV 1820
V + + AYGPGL G+
Sbjct: 64 VAGYDANRVRAYGPGLEGGL 5
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = -2
Query: 1846 PSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNDQHIPGSPFTARVT 1894
P K++I+C + DGT +V+Y+P PG+Y + V + D+ +PGSPFTA +T
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT 373
Score = 38.5 bits (88), Expect(2) = 1e-07, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -2
Query: 1551 GLLAVQITDPEGKPKKTHIQDNHDGTYTVAYVPDVPGRYTILIKYGGDEIPFSPYRVRAV 1610
G+ + DPE K + + DGT V Y+P+ PG Y + + +G +P SP+
Sbjct: 546 GIWI*LLMDPEKS--KINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT 373
Query: 1611 PT 1612
P+
Sbjct: 372 PS 367
Score = 38.1 bits (87), Expect(2) = 1e-07, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = -1
Query: 1653 GKGKVTCTVCTPDGSXXXXXXXXXXXGTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVT 1712
G+G+V + TP G GT+ + YT + G + V + G +P SPFQV
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1713 IPERPMVGVNGLDVTSLRPF 1732
V G D +R +
Sbjct: 67 -------AVAGYDANRVRAY 29
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = -1
Query: 1368 PSEAKMSCM-DN-KDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVHDVTDASKVK 1425
PS K+ + DN KDG+ V Y P E G SL+VTY G +PGSPF+V DA++V+
Sbjct: 214 PSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVR 35
Query: 1426 CSGPGLSPGM 1435
GPGL G+
Sbjct: 34 AYGPGLEGGL 5
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = -1
Query: 2114 DMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQFTVGP 2173
++ A +T+PSG+ + + ++ TY + + P E G ++ V YKG +PGSPFQ V
Sbjct: 238 EVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQ--VNA 65
Query: 2174 LGEGGAHKVRAGGPGLE 2190
+ A++VRA GPGLE
Sbjct: 64 VAGYDANRVRAYGPGLE 14
Score = 39.7 bits (91), Expect(2) = 5e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = -2
Query: 1945 NGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIG-DASRVRVSGQGLH-EGH 2002
+G V ++++P+ GE+ V V + V SP +I+ SE+ D S + SG G+ EG
Sbjct: 483 DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGV 304
Query: 2003 TFE-PAEFIID 2012
E P+EF++D
Sbjct: 303 FIEAPSEFVVD 271
Score = 34.3 bits (77), Expect(2) = 5e-07, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 2030 KVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVK 2074
K+ ++++DGT V Y P E G +++ + +PGSPF V
Sbjct: 202 KLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Score = 36.6 bits (83), Expect(2) = 4e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 589 PSQAKIE--CDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIREAPQDFHPD 646
PS K++ D+ DG+ V Y P E G ++ V I SPF + A + +
Sbjct: 214 PSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN---AVAGYDAN 44
Query: 647 RVKARGPGLE 656
RV+A GPGLE
Sbjct: 43 RVRAYGPGLE 14
Score = 31.2 bits (69), Expect(2) = 4e-05, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = -2
Query: 500 RVKQKDLGDGVYGFEYYPTIPGTYTVTITWGGQNIGRSPFEV-----KVGTECGNQKVRA 554
++ + DG Y P PG Y V ++ G + + SPF ++ + +
Sbjct: 507 KINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASG 328
Query: 555 WGPGLEGGIVGKSADFVVEA 574
+G EG + ++FVV+A
Sbjct: 327 YGISPEGVFIEAPSEFVVDA 268
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = -1
Query: 285 GQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLFAGQHIAKSPFE 344
GQGEV + P+G + + V +N K+ T+ V Y P G + V + G I SPF+
Sbjct: 247 GQGEVEAILTTPSGRKLQTLV--DNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQ 74
Query: 345 VYVDKSQGDASKVTAQGPGLE 365
V DA++V A GPGLE
Sbjct: 73 VNAVAGY-DANRVRAYGPGLE 14
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = -2
Query: 2028 PSKVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVT 2076
P K IN + +DGT VTY P PG Y + + D+ VPGSPF+ +T
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT 373
Score = 34.3 bits (77), Expect(2) = 1e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -1
Query: 1835 GEGGLSLAIEGPSKAEI-SCTDN-QDGTCSVSYLPVLPGDYSILVKYNDQHIPGSPFTAR 1892
G+G + + PS ++ + DN +DGT V Y P+ G S+ V Y IPGSPF
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1893 -VTGDDSMRM 1901
V G D+ R+
Sbjct: 67 AVAGYDANRV 38
Score = 31.6 bits (70), Expect(2) = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Frame = -2
Query: 1766 DGTVTVRYSPSEAGLHEMDIRYDNMHIPGSPLQFYVDYV----NCGHITAYGPGLT-HGV 1820
DGTV V Y P G +++ + + + +PGSP + + ITA G G++ GV
Sbjct: 483 DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGV 304
Query: 1821 -VNKPATFTVNT------KDAGEGGLS 1840
+ P+ F V+ KD G LS
Sbjct: 303 FIEAPSEFVVDASVLDP*KDKGRWRLS 223
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 44/118 (37%), Gaps = 3/118 (2%)
Frame = -2
Query: 2410 PSKVKMDCQECPEG-YRVTYTPMAPGSYLISIKYGGPYHIGGSPFKAKVTGPRLVSNHSL 2468
P K K++C +G VTY P PG Y + + +G + GSPF A +T L
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGD-KPVPGSPFTALITPSEL------ 361
Query: 2469 HETSSVFVDSLTKVATVPQHATSGPGPADVSKVVAKGLGLSK--AYVGQKSNFTVDCS 2524
DVS + A G G+S ++ S F VD S
Sbjct: 360 --------------------------DPDVSSITASGYGISPEGVFIEAPSEFVVDAS 265
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 2325 DQDKYAVRFIPRENGIYLIDVKFNGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAGL--EG 2382
D V +IP G Y + V +PGSPF + D ++A G G+ EG
Sbjct: 486 DDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEG 307
Query: 2383 GVTGSPAEFIVNTS 2396
+P+EF+V+ S
Sbjct: 306 VFIEAPSEFVVDAS 265
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -2
Query: 701 NGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGS---HPNKVKVYGPGVAKTGL 757
+GT + +Y+P P ++ VS G +P SPF + + + G G++ G+
Sbjct: 483 DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGV 304
Query: 758 KAHEPTYFTVDCT 770
P+ F VD +
Sbjct: 303 FIEAPSEFVVDAS 265
>05081
Length = 981
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = -1
Query: 2497 DVSKVVAKGLGLSKAYVGQKSNFTVDCSKAGNNMLLVGVHGPR-TPCEEILVKHMGSRLY 2555
D SKVVAKG GL KA+ + F VD AG +L VG+ P P E+ VK + Y
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 2556 SVSYLLKDKGEYTLVVKWGDEHIPGSPY 2583
+++Y + + G++ L VKWGD+ IPGSP+
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = -1
Query: 1986 GDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPS---KVDINTEDLEDGT 2042
GDAS+V GQGL + T F +D +DAG L + + PS + +++ + + +
Sbjct: 960 GDASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTS 781
Query: 2043 CRVTYCPTEPGNYIINIKFADQHVPGSPF 2071
+ Y TE G++++++K+ D +PGSPF
Sbjct: 780 YTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -1
Query: 1805 NCGHITAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPS---KAEISCTDNQDGTC 1861
+ + A G GL N+ TF V+ KDAGE L + + PS +AE+S + +
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 1862 SVSYLPVLPGDYSILVKYNDQHIPGSPF 1889
+++Y GD+ + VK+ D IPGSPF
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = -1
Query: 1517 DASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPK-KTHIQDNHDG 1575
DASKV A G GL + F +D KDAGE LL V + P GKP+ + ++ +
Sbjct: 957 DASKVVAKGQGLKKA--FTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNT 784
Query: 1576 TYTVAYVPDVPGRYTILIKYGGDEIPFSPY 1605
+YT+ Y G + + +K+G D+IP SP+
Sbjct: 783 SYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = -1
Query: 1420 DASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEP-VDVVDNADG 1478
DASKV G GL N Q+FQVD AG A LQV + P G E + V +
Sbjct: 957 DASKVVAKGQGLKKAF--TNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNT 784
Query: 1479 TQTVNYVPSREGSYSISVLYGEEEVPRSPF 1508
+ T+NY + G + + V +G++++P SPF
Sbjct: 783 SYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = -1
Query: 1132 DASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSEAGLP-AEVYIQDHGDGTH 1190
DASKV G GL++A + FQVD AG A L + + + +G P AE+ ++ + ++
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 1191 TITYIPLCPGAYTVTIKYGGQPVPNFP 1217
TI Y G + + +K+G +P P
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSP 697
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Frame = -1
Query: 2176 EGGAHKVRAGGPGLERAEAGVPAEFGIWTREAGAGGLAIAVEGPS---KAEISFEDRKDG 2232
G A KV A G GL++A F + ++AG L + + PS +AE+S + +
Sbjct: 963 RGDASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNT 784
Query: 2233 SCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVV-------------PVASPSGDARRL 2276
S + Y V E GD+ + VK+ ++ IP SPFV+ PV P G+ + L
Sbjct: 783 SYTINYKVTEIGDHVLHVKWGDDDIPGSPFVLST*TA*FPPETSFPVNKPCGENKLL 613
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%)
Frame = -1
Query: 347 VDKSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGMGEVEVVIQDPTGQKGTVEPQ 406
+ + +GDASKV A+G GL+ + N+ F++ AG ++V + P+G K E
Sbjct: 975 IRRFRGDASKVVAKGQGLKKA--FTNRLQTFQVDVKDAGEALLQVGMIAPSG-KPEAELS 805
Query: 407 LEARGDSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVT 446
++ +++Y +Y+ T G H +HV + IP SP+ ++
Sbjct: 804 VKKTTNTSYTINYKVTEIGDHVLHVKWGDDDIPGSPFVLS 685
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -1
Query: 647 RVKARGPGLEKTGVAVNKPAEFTVDAKHAGKAPLRVQVQDNEGC-SVEATVKDNGNGTYS 705
+V A+G GL+K N+ F VD K AG+A L+V + G E +VK N +Y+
Sbjct: 948 KVVAKGQGLKKA--FTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYT 775
Query: 706 CSYVPRKPVKHTAMVSWGGVSIPNSPF 732
+Y + H V WG IP SPF
Sbjct: 774 INYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = -1
Query: 1327 DPSRVRVHGPGIQSGTTNKPNKFTXXXXXXXXXXXXXXXXXPS---EAKMSCMDNKDGSC 1383
D S+V G G++ TN+ F PS EA++S + S
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 1384 SVEYIPYEAGTYSLNVTYGGHQVPGSPF 1411
++ Y E G + L+V +G +PGSPF
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -1
Query: 1041 SKVKAFGPGLQGGNAGSPARFTIDTKXXXXXXXXXXVEGPC---EAQLECLDNGDGTCSV 1097
SKV A G GL+ F +D K + P EA+L + + ++
Sbjct: 951 SKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTI 772
Query: 1098 SYVPTEPGDYNINILFADTHIPGSPF 1123
+Y TE GD+ +++ + D IPGSPF
Sbjct: 771 NYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 38.1 bits (87), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Frame = -1
Query: 844 DASKVKAEGPGLNRTGVELGKPTHFTVNAKTAGKGKLDVQFSGLAKGDAVRDVDIIDHHD 903
DASKV A+G GL + + F V+ K AG+ L V G ++ + +
Sbjct: 957 DASKVVAKGQGLKKAFTN--RLQTFQVDVKDAGEALLQVGMIA-PSGKPEAELSVKKTTN 787
Query: 904 NTYTVKYIPVQQGPVGVNVTYGGDHIPKSPF 934
+YT+ Y + G ++V +G D IP SPF
Sbjct: 786 TSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = -1
Query: 2105 LKIPEISIQD-----MTAQVTSPSGK-THEAEIVEGENHTYCIRFVPAEMGMHTVSVKYK 2158
L+ ++ ++D + + +PSGK E + + N +Y I + E+G H + VK+
Sbjct: 900 LQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTINYKVTEIGDHVLHVKWG 721
Query: 2159 GQHVPGSPF 2167
+PGSPF
Sbjct: 720 DDDIPGSPF 694
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 1914 INISETDLSLLTATVVPPSGREEPCL-LKRLRNGHVGISFVPKETGEHLVHVKKNGQHVA 1972
+++ + +LL ++ PSG+ E L +K+ N I++ E G+H++HVK +
Sbjct: 885 VDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTINYKVTEIGDHVLHVKWGDDDIP 706
Query: 1973 SSPI 1976
SP
Sbjct: 705 GSPF 694
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = -1
Query: 455 ACRAIGRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKG--EERVKQKDLGDGVYG 512
A + + +G K F+V K AG L+V + P G E + K + Y
Sbjct: 954 ASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYT 775
Query: 513 FEYYPTIPGTYTVTITWGGQNIGRSPF 539
Y T G + + + WG +I SPF
Sbjct: 774 INYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = -1
Query: 2271 GDARRLTVSSLQESGLK---VNQPASFAVSLNGA-KGAIDAKVHSPSGALE-ECYVTEID 2325
GDA ++ GLK N+ +F V + A + + + +PSG E E V +
Sbjct: 960 GDASKVVAKG---QGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTT 790
Query: 2326 QDKYAVRFIPRENGIYLIDVKFNGTHIPGSPF 2357
Y + + E G +++ VK+ IPGSPF
Sbjct: 789 NTSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
>19147
Length = 474
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +1
Query: 86 FLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRL 145
++ + +KLVSI ++ IVDGN+K+ LG+IWT+IL ++I +D ++ T K+ L
Sbjct: 49 YIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAI--------QDITVEELTAKEGL 204
Query: 146 LGWIQNKLP---QLPITNFSRDWQSGRALGALVDSCAPGL 182
L W Q K + + NF ++ G A AL+ P L
Sbjct: 205 LLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPEL 324
>19154
Length = 512
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Frame = +2
Query: 1742 KGEITGEVRMPSGKVAQPSITDNKDGTVTVRYSPSEAGLHEMDIRYDNMHIPGSPLQFYV 1801
K E T + PSG+ +T+ + Y PSE+G H + + Y+++ +PGSP +
Sbjct: 104 KCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLELPGSP---FT 274
Query: 1802 DYVNCGHI-TAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGP-SKAEISCTDNQDG 1859
++ G + AYG GL G +K A F ++ + G S+ ++GP S A+ S DG
Sbjct: 275 QEISEGVLPPAYGEGLHRGEEDKAAIFYIDARGL-TGEPSVQVDGPNSIAKCSIEAQPDG 451
Query: 1860 TCSVSYLPV 1868
SV+Y+PV
Sbjct: 452 QYSVTYIPV 478
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Frame = +2
Query: 2097 IGSHCDLSLKIPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGMHTVSVK 2156
+ + D S++ + T ++ SPSG++ ++ E + Y I + P+E G H + +
Sbjct: 59 LANWLDFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLT 238
Query: 2157 YKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFGIWTREAGAGGLAIAV 2216
Y +PGSPF + EG A G GL R E A F I R G ++ V
Sbjct: 239 YNSLELPGSPF---TQEISEGVLPP--AYGEGLHRGEEDKAAIFYIDAR-GLTGEPSVQV 400
Query: 2217 EGP-SKAEISFEDRKDGSCGVAYVVQEPG 2244
+GP S A+ S E + DG V Y+ E G
Sbjct: 401 DGPNSIAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +2
Query: 2308 KVHSPSGALEECYVTEIDQDKYAVRFIPRENGIYLIDVKFNGTHIPGSPFKIRVGEPGHG 2367
++ SPSG VTE Y + + P E+G + I + +N +PGSPF + E
Sbjct: 122 RIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLELPGSPFTQEISE---- 289
Query: 2368 GDPGLVSAYGAGLEGGVTGSPAEFIVNTSNAGAGALSVTIDGPSKV-KMDCQECPEG-YR 2425
L AYG GL G A F ++ + G SV +DGP+ + K + P+G Y
Sbjct: 290 --GVLPPAYGEGLHRGEEDKAAIFYID-ARGLTGEPSVQVDGPNSIAKCSIEAQPDGQYS 460
Query: 2426 VTYTPMAPGS 2435
VTY P+ GS
Sbjct: 461 VTYIPVEVGS 490
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Frame = +2
Query: 963 EFTVKSKGAGGQGKVASKIVSPSGAAVPCKV-EPGLGADNSVVRFVPREEGPYEVEVTYD 1021
+F+V++ +G + + +IVSPSG +VP V E N + + P E G + + +TY+
Sbjct: 74 DFSVETSRSG-KCEQTVRIVSPSGQSVPVDVTETSTYGYN--ITYQPSESGQHRIFLTYN 244
Query: 1022 GVPVPGSPFPLEAVAPTKPSKVKAFGPGLQGGNAGSPARFTIDTKXXXXXXXXXXVEGPC 1081
+ +PGSPF E P A+G GL G A F ID + V+GP
Sbjct: 245 SLELPGSPFTQEISEGVLP---PAYGEGLHRGEEDKAAIFYIDAR-GLTGEPSVQVDGPN 412
Query: 1082 E-AQLECLDNGDGTCSVSYVPTEPG 1105
A+ DG SV+Y+P E G
Sbjct: 413 SIAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%)
Frame = +2
Query: 1444 FQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNADGTQTVNYVPSREGSYSISVLYGEEEV 1503
F V+TS++G V++ P G PVDV + + + Y PS G + I + Y E+
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLEL 256
Query: 1504 PRSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGK 1563
P SPF ++ + A G GL+ G + F IDA+ G +VQ+ P
Sbjct: 257 PGSPFTQEI---SEGVLPPAYGEGLH-RGEEDKAAI-FYIDARGL-TGEPSVQVDGPNSI 418
Query: 1564 PKKTHIQDNHDGTYTVAYVP 1583
K I+ DG Y+V Y+P
Sbjct: 419 -AKCSIEAQPDGQYSVTYIP 475
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Frame = +2
Query: 1911 DIPINISETDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQH 1970
D + S + T +V PSG+ P + I++ P E+G+H + + N
Sbjct: 74 DFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLE 253
Query: 1971 VASSPIPVVISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSK 2030
+ SP IS+ + A G+GLH G + A F ID R G S+ ++GP+
Sbjct: 254 LPGSPFTQEISEGVLPPA-----YGEGLHRGEEDKAAIFYIDARGLT-GEPSVQVDGPNS 415
Query: 2031 V-DINTEDLEDGTCRVTYCPTEPGN 2054
+ + E DG VTY P E G+
Sbjct: 416 IAKCSIEAQPDGQYSVTYIPVEVGS 490
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%)
Frame = +2
Query: 377 FEIFTAGAGMGEVEVVIQDPTGQKGTVEPQLEARGDSTYRCSYQPTMEGVHTVHVTFAGV 436
F + T+ +G E V I P+GQ V+ + Y +YQP+ G H + +T+ +
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVD--VTETSTYGYNITYQPSESGQHRIFLTYNSL 250
Query: 437 PIPRSPYTVTVGQACNPAACRAIGRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPK 496
+P SP+T + + P A G GL +G K A F + +G +GE V V GP
Sbjct: 251 ELPGSPFTQEISEGVLPP---AYGEGLH-RGEEDK-AAIFYIDARGL-TGEPSVQVDGPN 412
Query: 497 GEERVKQKDLGDGVYGFEYYP 517
+ + DG Y Y P
Sbjct: 413 SIAKCSIEAQPDGQYSVTYIP 475
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Frame = +2
Query: 475 DFKVYTKGAGSGELKVTVKGPKGEER-VKQKDLGDGVYGFEYYPTIPGTYTVTITWGGQN 533
DF V T +G E V + P G+ V + Y Y P+ G + + +T+
Sbjct: 74 DFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLE 253
Query: 534 IGRSPFEVKVGTECGNQKVR--AWGPGLEGGIVGKSADFVVEAIGDDVGTLGFSVEGP-S 590
+ SPF ++ ++ V A+G GL G K+A F ++A G G V+GP S
Sbjct: 254 LPGSPFTQEI-----SEGVLPPAYGEGLHRGEEDKAAIFYIDARG-LTGEPSVQVDGPNS 415
Query: 591 QAKIECDDKGDGSCDVRYWPQEAG 614
AK + + DG V Y P E G
Sbjct: 416 IAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 55/145 (37%)
Frame = +2
Query: 1250 EFSVDARALTQTGGPHVKARVANPSGNLTDTYVQDCGDGTYKVEYTPYEEGVHSVDVTYD 1309
+FSV+ +++G R+ +PSG V + Y + Y P E G H + +TY+
Sbjct: 74 DFSVET---SRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYN 244
Query: 1310 GXXXXXXXXXXXXTEGCDPSRVRVHGPGIQSGTTNKPNKFTXXXXXXXXXXXXXXXXXPS 1369
+EG P +G G+ G +K F S
Sbjct: 245 SLELPGSPFTQEISEGVLPP---AYGEGLHRGEEDKAAIFYIDARGLTGEPSVQVDGPNS 415
Query: 1370 EAKMSCMDNKDGSCSVEYIPYEAGT 1394
AK S DG SV YIP E G+
Sbjct: 416 IAKCSIEAQPDGQYSVTYIPVEVGS 490
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%)
Frame = +2
Query: 1096 SVSYVPTEPGDYNINILFADTHIPGSPFKAHVAPCFDASKVKCSGPGLERATAGEVGQFQ 1155
+++Y P+E G + I + + +PGSPF ++ + G GL R + F
Sbjct: 188 NITYQPSESGQHRIFLTYNSLELPGSPFTQEIS---EGVLPPAYGEGLHRGEEDKAAIFY 358
Query: 1156 VDCSSAGSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGA 1201
+D + E ++++ + A+ I+ DG +++TYIP+ G+
Sbjct: 359 IDARGL-TGEPSVQVDGPNSI-AKCSIEAQPDGQYSVTYIPVEVGS 490
Score = 37.7 bits (86), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 1539 VEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAYVPDVPGRYTILIKYGGD 1598
++F+++ +G+ V+I P G+ + + Y + Y P G++ I + Y
Sbjct: 71 LDFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSL 250
Query: 1599 EIPFSPY 1605
E+P SP+
Sbjct: 251 ELPGSPF 271
Score = 37.0 bits (84), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 1827 FTVNTKDAGEGGLSLAIEGPS--KAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNDQHI 1884
F+V T +G+ ++ I PS + T+ +++Y P G + I + YN +
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLEL 256
Query: 1885 PGSPFTARVT 1894
PGSPFT ++
Sbjct: 257 PGSPFTQEIS 286
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%)
Frame = +2
Query: 1384 SVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVHDVTDASKVKCSGPGLSPGMVRANLPQS 1443
++ Y P E+G + + +TY ++PGSPF ++++ G GL G +
Sbjct: 188 NITYQPSESGQHRIFLTYNSLELPGSPF---TQEISEGVLPPAYGEGLHRG--EEDKAAI 352
Query: 1444 FQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNADGTQTVNYVPSREGS 1491
F +D P V+V GP + + + DG +V Y+P GS
Sbjct: 353 FYIDARGLTGEP-SVQVDGPNSIAK-CSIEAQPDGQYSVTYIPVEVGS 490
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +2
Query: 270 MVKKRAEFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKV 329
M+ +F+VET +G+ E V + P+G VT + +++ Y P +G H++
Sbjct: 56 MLANWLDFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYG--YNITYQPSESGQHRI 229
Query: 330 TVLFAGQHIAKSPF 343
+ + + SPF
Sbjct: 230 FLTYNSLELPGSPF 271
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 2390 EFIVNTSNAGAGALSVTIDGPS--KVKMDCQECPE-GYRVTYTPMAPGSYLISIKYGGPY 2446
+F V TS +G +V I PS V +D E GY +TY P G + I + Y
Sbjct: 74 DFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNS-L 250
Query: 2447 HIGGSPFKAKVT 2458
+ GSPF +++
Sbjct: 251 ELPGSPFTQEIS 286
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 2008 EFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTC--RVTYCPTEPGNYIINIKFADQH 2065
+F ++T +G ++ I PS + + E T +TY P+E G + I + +
Sbjct: 74 DFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLE 253
Query: 2066 VPGSPFSVKVT 2076
+PGSPF+ +++
Sbjct: 254 LPGSPFTQEIS 286
>09100
Length = 930
Score = 57.4 bits (137), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = +1
Query: 10 EDAPWKKIQQ--NTFTRWCNEHLKCV--SKRIANLQTDLSDGLRLIALLEVLSQKKMHRK 65
E W + QQ + + W N LK + I +L+ D+ DG+ ++ ++S++++
Sbjct: 433 ESRTWIEPQQQLSAYMAWINSQLKKKPGAHLIEDLRHDMRDGVVFADVIHIVSKQQIPGI 612
Query: 66 HNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHY 121
N T +M+ +NV L F+ + IK+ I S+ IV+GNLK ++ LI L HY
Sbjct: 613 QNVPTTLDEMR-QNVDRVLHFMTQNRIKMHRISSRDIVEGNLKAVMRLILALAAHY 777
>29755
Length = 460
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 36/45 (80%)
Frame = +3
Query: 2543 EEILVKHMGSRLYSVSYLLKDKGEYTLVVKWGDEHIPGSPYRIMV 2587
+E+ VK++GS Y+++Y +K +G Y L+V+WGDE+IPGSP+ + V
Sbjct: 3 DELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 1679 GTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTI 1713
G ++I YT Q G Y++ VR+G E++P SPF V +
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 38.5 bits (88), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 693 EATVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNV 736
E TVK G+G Y+ +Y ++ + +V WG +IP SPF V+V
Sbjct: 6 ELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 1478 GTQTVNYVPSREGSYSISVLYGEEEVPRSPFKVKVL 1513
G +NY ++GSY + V +G+E +P SPF V V+
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI 140
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 2041 GTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKV 2075
G + Y + G+Y++ +++ D+++PGSPF+V V
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 2223 EISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPV 2266
E++ + G + Y V++ G Y + V++ +E+IP SPF V V
Sbjct: 6 ELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 1859 GTCSVSYLPVLPGDYSILVKYNDQHIPGSPFTARVTGD 1896
G +++Y G Y ++V++ D++IPGSPF V D
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI*D 146
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 1091 GDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVAPCFDASKVKCS 1139
G G +++Y + G Y + + + D +IPGSPF V F A+ + +
Sbjct: 27 GSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI*DFPAAHLDLT 173
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 2317 EECYVTEIDQDKYAVRFIPRENGIYLIDVKFNGTHIPGSPFKIRV 2361
+E V + +Y + + ++ G Y++ V++ +IPGSPF + V
Sbjct: 3 DELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 504 KDLGDGVYGFEYYPTIPGTYTVTITWGGQNIGRSPFEVKV 543
K +G G Y Y G+Y + + WG +NI SPF V V
Sbjct: 18 KYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 1381 GSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPV 1415
G ++ Y + G+Y L V +G +PGSPF V V
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 906 YTVKYIPVQQGPVGVNVTYGGDHIPKSPFSVGV-----SPSLDLSKIKVS 950
Y + Y QQG + V +G ++IP SPF+V V + LDL+ V+
Sbjct: 39 YNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI*DFPAAHLDLTNSSVA 188
>35059
Length = 669
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Frame = +2
Query: 2007 AEFIIDTRDAGYGGLSLSIEGPS-KVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQH 2065
AEF++D R AG G + + ++G + ++ ++ R TY P PG +++ + +++
Sbjct: 137 AEFVVDGRRAGPGEVRVELKGVRISLPVHITPIKYDRYRCTYTPAFPGGFLLYVYWSNIL 316
Query: 2066 VPGSPFSVKVTGEGRVKE-SITRRRRAPSVANIGSHCDLSLKIPEISIQDMTAQVTSPSG 2124
VPG P V VT +G V +T +A GS + + + + +
Sbjct: 317 VPGCPHKVTVTSKGDVSXVKVTGEGLKGGIA--GSELRVFVDNKRGWSRGGNSDMFDTPT 490
Query: 2125 KTHEAEIVEGENHTYCIRFVPAEMGMHTVSVKYKGQHVPGSPFQ 2168
+ E + + + P H + V+Y GQHVPGSP +
Sbjct: 491 RGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Frame = +2
Query: 2320 YVTEIDQDKYAVRFIPRENGIYLIDVKFNGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAG 2379
++T I D+Y + P G +L+ V ++ +PG P K+ V GD V G G
Sbjct: 221 HITPIKYDRYRCTYTPAFPGGFLLYVYWSNILVPGCPHKVTVTSK---GDVSXVKVTGEG 391
Query: 2380 LEGGVTGSPAE-FIVNTSNAGAGALSVTIDGPSK--VKMDCQECPEGYRVTYTPMAPGSY 2436
L+GG+ GS F+ N G S D P++ + + + V P + +
Sbjct: 392 LKGGIAGSELRVFVDNKRGWSRGGNSDMFDTPTRGTSGREAERLSPLHAVYPCPTSADKH 571
Query: 2437 LISIKYGGPYHIGGSPFK 2454
L+ ++Y G H+ GSP +
Sbjct: 572 LLQVRYDG-QHVPGSPLR 622
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +2
Query: 1951 SFVPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHT-FEPAEF 2009
++ P G L++V + V P V ++ GD S V+V+G+GL G E F
Sbjct: 257 TYTPAFPGGFLLYVYWSNILVPGCPHKVTVTSK--GDVSXVKVTGEGLKGGIAGSELRVF 430
Query: 2010 IIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCRVTY-CPTEPGNYIINIKFADQHVPG 2068
+ + R GG S + P++ E Y CPT +++ +++ QHVPG
Sbjct: 431 VDNKRGWSRGGNSDMFDTPTRGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVPG 610
Query: 2069 SPF 2071
SP
Sbjct: 611 SPL 619
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%)
Frame = +2
Query: 666 AEFTVDAKHAGKAPLRVQVQDNEGCSVEATVKDNGNGTYSCSYVPRKPVKHTAMVSWGGV 725
AEF VD + AG +RV+++ S+ + Y C+Y P P V W +
Sbjct: 137 AEFVVDGRRAGPGEVRVELKGVR-ISLPVHITPIKYDRYRCTYTPAFPGGFLLYVYWSNI 313
Query: 726 SIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLKAHEPTYF 765
+P P +V V + + VKV G G+ K G+ E F
Sbjct: 314 LVPGCPHKVTVTSKGDVSXVKVTGEGL-KGGIAGSELRVF 430
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 6/168 (3%)
Frame = +2
Query: 963 EFTVKSKGAG-GQGKVASKIVSPSGAAVPCKVEPGLGADNSVVRFVPREEGPYEVEVTYD 1021
EF V + AG G+ +V K V S +P + P + D + P G + + V +
Sbjct: 140 EFVVDGRRAGPGEVRVELKGVRIS---LPVHITP-IKYDRYRCTYTPAFPGGFLLYVYWS 307
Query: 1022 GVPVPGSPFPLEAVAPTKPSKVKAFGPGLQGGNAGSPARFTIDTKXXXXXXXXXXV---- 1077
+ VPG P + + S VK G GL+GG AGS R +D K +
Sbjct: 308 NILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWSRGGNSDMFDTP 487
Query: 1078 -EGPCEAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFK 1124
G + E L +V PT + + + + H+PGSP +
Sbjct: 488 TRGTSGREAERLSP---LHAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 6/177 (3%)
Frame = +2
Query: 370 IANKTTYFEIFTAG--AGMGEVEVVIQDPTGQKGTVEPQLEARGDSTYRCSYQPTMEGVH 427
IA T E G AG GEV V ++ G + ++ + YRC+Y P G
Sbjct: 116 IARATVQAEFVVDGRRAGPGEVRVELK---GVRISLPVHITPIKYDRYRCTYTPAFPGGF 286
Query: 428 TVHVTFAGVPIPRSPYTVTVGQACNPAACRAIGRGLQPKGVRVKETADF----KVYTKGA 483
++V ++ + +P P+ VTV + + + G GL+ G+ E F + +++G
Sbjct: 287 LLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLK-GGIAGSELRVFVDNKRGWSRGG 463
Query: 484 GSGELKVTVKGPKGEERVKQKDLGDGVYGFEYYPTIPGTYTVTITWGGQNIGRSPFE 540
S +G G E + L VY PT + + + + GQ++ SP
Sbjct: 464 NSDMFDTPTRGTSGREAERLSPL-HAVYPC---PTSADKHLLQVRYDGQHVPGSPLR 622
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 76/204 (37%), Gaps = 8/204 (3%)
Frame = +2
Query: 2389 AEFIVNTSNAGAGALSVTIDGPSKVKMDCQECP---EGYRVTYTPMAPGSYLISIKYGGP 2445
AEF+V+ AG G + V + G ++ + P + YR TYTP PG +L+ + Y
Sbjct: 137 AEFVVDGRRAGPGEVRVELKG-VRISLPVHITPIKYDRYRCTYTPAFPGGFLLYV-YWSN 310
Query: 2446 YHIGGSPFKAKVTGPRLVSNHSLHETSSVFVDSLTKVATVPQHATSGPGPADVSKVVAKG 2505
+ G P K VT DVS V G
Sbjct: 311 ILVPGCPHKVTVTSK-----------------------------------GDVSXVKVTG 385
Query: 2506 LGLSKAYVGQKSNFTVD----CSKAGN-NMLLVGVHGPRTPCEEILVKHMGSRLYSVSYL 2560
GL G + VD S+ GN +M G E L S L++V
Sbjct: 386 EGLKGGIAGSELRVFVDNKRGWSRGGNSDMFDTPTRGTSGREAERL-----SPLHAVYPC 550
Query: 2561 LKDKGEYTLVVKWGDEHIPGSPYR 2584
++ L V++ +H+PGSP R
Sbjct: 551 PTSADKHLLQVRYDGQHVPGSPLR 622
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 1/186 (0%)
Frame = +2
Query: 274 RAEFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLF 333
+AEF V+ R AG GEV V ++ G + V K + Y P G + V +
Sbjct: 134 QAEFVVDGRRAGPGEVRVELK---GVRISLPVHITPIKYDRYRCTYTPAFPGGFLLYVYW 304
Query: 334 AGQHIAKSPFEVYVDKSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGMGEVEVVI 393
+ + P +V V S+GD S V G GL+ G ++ F G G +
Sbjct: 305 SNILVPGCPHKVTV-TSKGDVSXVKVTGEGLK-GGIAGSELRVFVDNKRGWSRGGNSDMF 478
Query: 394 QDPTGQKGTVEPQLEARGDSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACN- 452
PT E + + + Y C PT H + V + G +P SP ++
Sbjct: 479 DTPTRGTSGREAERLSPLHAVYPC---PTSADKHLLQVRYDGQHVPGSPLRP*ESESLQM 649
Query: 453 PAACRA 458
PA CR
Sbjct: 650 PARCRC 667
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 49/122 (40%)
Frame = +2
Query: 1098 SYVPTEPGDYNINILFADTHIPGSPFKAHVAPCFDASKVKCSGPGLERATAGEVGQFQVD 1157
+Y P PG + + + +++ +PG P K V D S VK +G GL+ AG + VD
Sbjct: 257 TYTPAFPGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVD 436
Query: 1158 CSSAGSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFP 1217
S ++ + H + P + + ++Y GQ VP P
Sbjct: 437 NKRGWSRGGNSDMFDTPTRGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVPGSP 616
Query: 1218 SK 1219
+
Sbjct: 617 LR 622
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 1142 GLERATAGEVGQFQVDCSSAGSAELTIEICS-EAGLPAEVYIQDHGDGTHTITYIPLCPG 1200
G E A A +F VD AG E+ +E+ LP V+I + TY P PG
Sbjct: 107 GAEIARATVQAEFVVDGRRAGPGEVRVELKGVRISLP--VHITPIKYDRYRCTYTPAFPG 280
Query: 1201 AYTVTIKYGGQPVPNFPSKLQVEPAVDTSGVQCYGPGIEG 1240
+ + + + VP P K+ V D S V+ G G++G
Sbjct: 281 GFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKG 400
Score = 37.7 bits (86), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 14/166 (8%)
Frame = +2
Query: 1825 ATFTVNTKDAGEGGLSLAIEGPS-KAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNDQH 1883
A F V+ + AG G + + ++G + T + +Y P PG + + V +++
Sbjct: 137 AEFVVDGRRAGPGEVRVELKGVRISLPVHITPIKYDRYRCTYTPAFPGGFLLYVYWSNIL 316
Query: 1884 IPGSPFTARVT--GDDS---MRMSHLKVGSA-ADIPINISET-------DLSLLTATVVP 1930
+PG P VT GD S + LK G A +++ + + + +
Sbjct: 317 VPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWSRGGNSDMFDTPTRG 496
Query: 1931 PSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPI 1976
SGRE +RL H + P +HL+ V+ +GQHV SP+
Sbjct: 497 TSGREA----ERLSPLHA-VYPCPTSADKHLLQVRYDGQHVPGSPL 619
Score = 33.9 bits (76), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 1775 PSEAGLHEMDIRYDNMHIPGSPLQ 1798
P+ A H + +RYD H+PGSPL+
Sbjct: 551 PTSADKHLLQVRYDGQHVPGSPLR 622
Score = 33.9 bits (76), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +2
Query: 1387 YIPYEAGTYSLNVTYGGHQVPGSPFKVPVHDVTDASKVKCSGPGLSPGMVRANL 1440
Y P G + L V + VPG P KV V D S VK +G GL G+ + L
Sbjct: 260 YTPAFPGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSEL 421
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +2
Query: 2504 KGLGLSKAYVGQKSNFTVDCSKAGNNMLLVGVHGPRTPCEEILVKHMGSRLYSVSYLLKD 2563
KG +++A V ++ F VD +AG + V + G R + + + Y +Y
Sbjct: 104 KGAEIARATV--QAEFVVDGRRAGPGEVRVELKGVRISLP-VHITPIKYDRYRCTYTPAF 274
Query: 2564 KGEYTLVVKWGDEHIPGSPYRIMV 2587
G + L V W + +PG P+++ V
Sbjct: 275 PGGFLLYVYWSNILVPGCPHKVTV 346
>09711
Length = 3041
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Frame = +1
Query: 18 QQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEV----LSQKKMHRKHNQRPTFR 73
++ T+ W N VS + +L +DL DGL + L + L +K + R
Sbjct: 850 EEKTYRNWMNS--LGVSPFVHHLYSDLYDGLIIFQLYDYIQPGLVDWSKVKKKFNKLKAR 1023
Query: 74 QMQLENVSVALEF---LDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDE 130
++EN + A+E + +KLV I + I+DGN L LGL+W L+ Y++++
Sbjct: 1024 FERIENCNYAVELGPQVKLVKVKLVGIAGQDILDGNPVLTLGLVWQLMRAYTLAIL---- 1191
Query: 131 EEDEEAKKQTPKQRLLGWIQNKLPQLP-ITNFS-RDWQSGRALGALVDSCAPGLCPDWDS 188
+ E K ++ W+ +K+ + I+ F R G + ++++ PG+ +WD+
Sbjct: 1192 SKITENNKPISDNEIITWVNSKIKKDDRISGFQDRKLNDGVIVARVIEAIKPGIV-NWDN 1368
Query: 189 WDAS-----KPVNNAREAMQQADDWLGIPQVITPEEIVD 222
D S + NAR A+ A +G PE+IV+
Sbjct: 1369 IDCSARDYQDRLTNARYAIGLARK-IGAGVYALPEDIVE 1482
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Frame = +1
Query: 18 QQNTFTRWCNEHLK----CVSKRIANLQTD-------LSDGLRLIALL-EVLSQKKMHRK 65
+Q F W N HL C K + L D ++DG+ L L+ +S R
Sbjct: 52 EQKAFAEWINRHLSDXPDC--KHLLPLDADGTQLFGQMADGVLLCKLINHSVSNTIDERT 225
Query: 66 HNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLI---LHYS 122
N++ + EN+++A+ V+I + + G L+LGL+W +I L
Sbjct: 226 INKQNLSLYRRHENLTLAVNSAGAIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLSD 405
Query: 123 ISMP--------MWDEEEDEEAKKQTPKQRLLGWIQNKLPQL----PITNFSRDWQSGRA 170
I++ + D E E+ + +P+Q LL W+ L + I NF D + A
Sbjct: 406 INLAHHPGLVNLLLDGETIEDLIRLSPEQILLRWVNYHLNRAGCDRQIXNFGEDIKDSEA 585
Query: 171 LGALVDSCAP 180
L+ +P
Sbjct: 586 YTHLLKQISP 615
>17613
Length = 1108
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +2
Query: 90 ESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWI 149
+ +KLVSI ++ IVDGN+K+ LG+IWT+IL ++I +D ++ T K+ LL W
Sbjct: 59 KGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAI--------QDITVEELTAKEGLLLWC 214
Query: 150 QNK 152
Q K
Sbjct: 215 QRK 223
>04951
Length = 2852
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Frame = +1
Query: 76 QLENVSVALEF---LDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEE 132
++EN A++ + +KLV I K I DGN L LGL+W L+ Y++++ +
Sbjct: 4 KIENCEYAVQLGPQMKVCKMKLVGIGGKDIHDGNPVLTLGLVWQLMRAYTLAIL----SK 171
Query: 133 DEEAKKQTPKQRLLGWIQNKLPQLPITNFSRD--WQSGRALGALVDSCAPGLCPDWDSW- 189
E KK ++ W+ +K+ + +D G + +++S PG+ +W++
Sbjct: 172 LTEDKKPIQDSEIVDWVNSKVKKDERIGSFQDSKLNDGVIVAKVIESIKPGIV-NWENIN 348
Query: 190 -DASKP---VNNAREAMQQADDWLGIPQVITPEEIVD 222
+AS+P + NAR A+ A +G PE+IV+
Sbjct: 349 PNASEPDDRLANARYAIGLARK-IGAGVYALPEDIVE 456
>18202
Length = 424
Score = 40.0 bits (92), Expect = 0.012, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 64/132 (48%)
Frame = -1
Query: 22 FTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVS 81
+ W N L V+ + N+ + + +G L L++VL+ + Q + + Q +
Sbjct: 379 YLSWANSVLCEVNSSVENVSS-IQEGRVLCELIDVLAPEAGLLDKVQ-ASGKSGQRAFIY 206
Query: 82 VALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTP 141
AL+ + IK+V ++ I+DG++K +L ++W LIL+Y I + +
Sbjct: 205 AALDHMKNHGIKIV-FSTQDIMDGDIKSLLDVMWLLILNYGIH---FIGNNSFQRSVGAG 38
Query: 142 KQRLLGWIQNKL 153
K+ LL W Q +L
Sbjct: 37 KKNLLDWCQGEL 2
>32088
Length = 1928
Score = 36.6 bits (83), Expect = 0.13, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 21/160 (13%)
Frame = +1
Query: 15 KKIQQNTFTRWCNEHLK----C-----VSKRIANLQTDLSDGLRLIALL-EVLSQKKMHR 64
K +Q F W N HLK C V++ +L + DG+ L L+ +S R
Sbjct: 1255 KDGEQKAFAAWINRHLKDDPDCKHLMEVNEEGDDLFKKVGDGILLCKLINHSVSNTIDER 1434
Query: 65 KHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLIL----- 119
N+ + EN+++A+ V+I + + G L+LGL+W +I
Sbjct: 1435 AINKSNLNVYHRHENLTLAVNSAGSIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLS 1614
Query: 120 ------HYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNKL 153
H + + + E E+ + +P++ LL W+ L
Sbjct: 1615 DINLAHHPGLVNLLREGETIEDFMRLSPEEILLRWVNYHL 1734
>11866
Length = 893
Score = 32.0 bits (71), Expect = 3.0, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -3
Query: 414 TYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPAACRAIGRGLQPKGVRVKET 473
T CS + + + T+ A +P+ RSP T+T+ CN A + R QP + K+
Sbjct: 213 TLSCSTRLGITALSTIPTLAASLPVNRSPNTITL---CNVWAALILAR*WQPLWAKGKQE 43
Query: 474 AD 475
D
Sbjct: 42 VD 37
>02928
Length = 1057
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +3
Query: 705 SCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLKAHEPTY 764
SC VP +P + S G R A HP ++++ P V K G++ E +Y
Sbjct: 483 SCQLVPAEPPEQPVCRSLGAQ-------RHQSPACVHPPRLRLSDPAVHKAGVQGQEASY 641
Query: 765 FT 766
FT
Sbjct: 642 FT 647
>31031
Length = 423
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 2030 KVDINTEDLEDGTCRVTYCP-TEPGNYIINIKFADQHVPGSPFSVK 2074
++ ++ D DG V P ++P + +++IK DQHV SP+ +K
Sbjct: 163 RMRVDVLDRHDGVYIVRLKPFSDPEHIVVSIKHNDQHVAHSPYQIK 300
Score = 31.2 bits (69), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 871 NAKTAGKGKLDVQFSGLAKGDAVR-DVDIIDHHDNTYTVKYIPVQQ-GPVGVNVTYGGDH 928
N T G+ Q S G VR VD++D HD Y V+ P + V++ + H
Sbjct: 94 NHLTDSVGEGAFQVSVTQNGQRVRMRVDVLDRHDGVYIVRLKPFSDPEHIVVSIKHNDQH 273
Query: 929 IPKSPFSV 936
+ SP+ +
Sbjct: 274 VAHSPYQI 297
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 14/100 (14%)
Frame = +1
Query: 1807 GHITAYGPGLTHGVVNKPATF----TVNTK------DAGEGGLSLAIEGPS---KAEISC 1853
G + +GPGL N P + V+TK GEG +++ + +
Sbjct: 4 GGYSGWGPGLK-SHFNVPVRYFYIQAVDTKGNHLTDSVGEGAFQVSVTQNGQRVRMRVDV 180
Query: 1854 TDNQDGTCSVSYLPVL-PGDYSILVKYNDQHIPGSPFTAR 1892
D DG V P P + +K+NDQH+ SP+ +
Sbjct: 181 LDRHDGVYIVRLKPFSDPEHIVVSIKHNDQHVAHSPYQIK 300
>20490
Length = 597
Score = 31.6 bits (70), Expect = 4.8, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 1703 HVPNSPFQVTIPERPMVGVNGLDVTSLRPFDL 1734
H P +P +++PE P + +N DVT L ++L
Sbjct: 36 HTPTTPEAISLPETPRILINDADVTDLSDWNL 131
>30961
Length = 1032
Score = 31.2 bits (69), Expect = 5.6, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -1
Query: 144 RLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWD---SWDASKPVNNAR 199
RLL +++ P L +TN S W S + + C P + +W +S V AR
Sbjct: 444 RLLPYLRQSPPALNLTNPSASWSSANTMRTVTTECXPAATSSSNV*ATWASSTTVRKAR 268
>37715
Length = 468
Score = 30.4 bits (67), Expect = 8.9, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 2543 EEILVKHMGSRLYSVSYLLKDKGEYTLVVKWGDEHIPGSPY--RIM 2586
E ILV +G + VS L D G + +V GD H+ G + R+M
Sbjct: 159 ENILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVM 22
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31560675|ref|NP_032470.2| kinesin family member 3B
[Mus musculus]
(747 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
33215 426 e-119
34477 177 1e-44
12048 170 2e-42
02896 150 3e-36
28434 145 8e-35
13148 127 1e-29
38050 86 2e-26
11818 109 3e-24
14618 107 2e-23
15043 106 3e-23
34899 95 5e-20
17748 64 2e-10
36593 52 6e-07
38061 39 0.011
>33215
Length = 696
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/226 (89%), Positives = 217/226 (96%)
Frame = +1
Query: 144 YLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSV 203
YLEIYQEEIRDLLSKDQ+KRLELK RPDTGVYVKDLSSFVTKSV+EIEHVMNVGNQNRSV
Sbjct: 1 YLEIYQEEIRDLLSKDQSKRLELKXRPDTGVYVKDLSSFVTKSVREIEHVMNVGNQNRSV 180
Query: 204 GATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLK 263
GATNMNEHSSRSHAIF+IT+ECSE+G DGENHIRVGKLN+VDLAGSERQAKTGA G+RLK
Sbjct: 181 GATNMNEHSSRSHAIFIITVECSEIGADGENHIRVGKLNMVDLAGSERQAKTGATGDRLK 360
Query: 264 EATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYN 323
EATKINLSLSAL NVISALVD K+THIPYRDSKLTRLLQDSLGGN+KT MVAN+GPASYN
Sbjct: 361 EATKINLSLSALSNVISALVDAKTTHIPYRDSKLTRLLQDSLGGNSKTTMVANIGPASYN 540
Query: 324 VEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKAQL 369
+ETLTTLRYANRAK+IKNKP++NEDPKDALLREFQ+EI RLK QL
Sbjct: 541 FDETLTTLRYANRAKSIKNKPKINEDPKDALLREFQDEINRLKNQL 678
>34477
Length = 811
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 111/142 (78%), Gaps = 1/142 (0%)
Frame = +3
Query: 229 GLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKST 288
G DGE H+RVGKL+LVDLAGSERQAKTGA G+RLKEATKINLSLS LGNVIS + G+
Sbjct: 165 GGDGEQHVRVGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVIS-VPGGRQE 341
Query: 289 HI-PYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVN 347
H P ++ + G +TVMVAN+GPA YN +ET++TLRYANRAKNIKNK ++N
Sbjct: 342 HTHPLQELQAHSPAAGLPGRQLQTVMVANMGPADYNYDETISTLRYANRAKNIKNKAKIN 521
Query: 348 EDPKDALLREFQEEIARLKAQL 369
EDPKDALLR+FQ+EI L+ QL
Sbjct: 522 EDPKDALLRQFQKEIEELRKQL 587
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 86/137 (62%)
Frame = +1
Query: 174 VYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGE 233
VYVKDLS+FV + +++ +M +GN+NRSVG+TNMN HSSRSHAIF +T+ECSE G G
Sbjct: 1 VYVKDLSAFVVNNADDMDRIMTLGNKNRSVGSTNMNMHSSRSHAIFTVTVECSEKGATGS 180
Query: 234 NHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYR 293
+ G + + Q ++ + +LVDGKSTHIPYR
Sbjct: 181 SMYVWANCTWWTWXGQRDKPRQEPQASA*RKRPRSTCLCQLWAM*YRSLVDGKSTHIPYR 360
Query: 294 DSKLTRLLQDSLGGNAK 310
+SKLTRLLQDSLGGN+K
Sbjct: 361 NSKLTRLLQDSLGGNSK 411
>12048
Length = 1162
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 158/296 (53%), Gaps = 10/296 (3%)
Frame = +2
Query: 57 FTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAY---GQTGTGKTYTMEGVRGDP 113
F FD +D KQ ++ P + S F T+ Y + G GKT+T+ G
Sbjct: 284 FRFDKCFDQ--KQTKMKCSRM*PSL-S*TTSFKATMGQYSLMARRGGGKTFTITGGAERY 454
Query: 114 EKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLS-KDQTKRLE------L 166
RG+IP S +I+ ++ + V SYLEIY + DLL K + +LE L
Sbjct: 455 MDRGLIPRSLSYIYEQTEKNPELSFTVHISYLEIYNDSGYDLLDPKHEAAKLEDLPKVNL 634
Query: 167 KERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECS 226
E D +++++LS S +E +++ +G+ NR + T MN+ SSRSH IF I I
Sbjct: 635 LEDSDQNIHLRNLSVHQANSEEEALNLLFLGDTNRMIAETPMNQASSRSHCIFTIHITTR 814
Query: 227 EVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGK 286
E G IR K +LVDLAGSER AKT G+ L EA IN SL L VI AL +
Sbjct: 815 ETG---SATIRRAKYHLVDLAGSERVAKTNVNGQLLTEARYINSSLHFLELVIIALSEKS 985
Query: 287 STHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKN 342
H+PYR+S +T +L+DSLGGN T M+A N++E+++T R+A R IKN
Sbjct: 986 RQHVPYRNSMMTSVLRDSLGGNCMTTMIATCSMEKRNMDESISTCRFAQRVAMIKN 1153
>02896
Length = 2076
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 124/198 (62%), Gaps = 2/198 (1%)
Frame = +1
Query: 174 VYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGE 233
++ + L+S + ++ +E +++ G NRS+ A ++N SSRSH IF + +E S +
Sbjct: 10 LWSRGLASHLAQNEEEALNLLFEGETNRSIAAHSLNRMSSRSHCIFTVYLE-SRSRVQSS 186
Query: 234 NHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYR 293
V KLN VDLAGSER K+ ++G+ + EA IN SLS L V+ AL D HIP+R
Sbjct: 187 AKYTVSKLNFVDLAGSERIGKSKSEGKMVTEAMYINKSLSFLEQVVIALADKNRDHIPFR 366
Query: 294 DSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNE--DPK 351
SKLT L+DS+GGN TV++ANV +EET++TLR+A R + N+P +NE DP
Sbjct: 367 QSKLTHYLKDSIGGNCNTVLIANVWGERAQLEETVSTLRFATRMMCVANEPAINEVYDPA 546
Query: 352 DALLREFQEEIARLKAQL 369
L+++ Q EI LKA+L
Sbjct: 547 -LLVKKLQREINHLKAEL 597
>28434
Length = 777
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/115 (66%), Positives = 88/115 (76%), Gaps = 3/115 (2%)
Frame = +2
Query: 245 DLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDG--KSTHIPYRDSKLTRLLQ 302
DLAGSER +T A+G+R KE IN L ALGNVISAL + K HIPYRDSKLTRLLQ
Sbjct: 62 DLAGSERAKRTRAEGDRFKEGVNINRGLLALGNVISALGEDVQKRGHIPYRDSKLTRLLQ 241
Query: 303 DSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPK-DALLR 356
DSLGGN+ T+MVA V PA N+EETL TLRYA+RA+ IKNKP +N DP+ D +LR
Sbjct: 242 DSLGGNSHTLMVACVSPADSNMEETLNTLRYADRARKIKNKPVINRDPQSDEILR 406
>13148
Length = 653
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
Frame = -3
Query: 93 FAYGQTGTGKTYTMEGVRGDPEKRGVIPNSFDHIFTHI-SRSQNQQYLVRASYLEIYQEE 151
F KT+TMEGV G+ +G+IP IF +I +N ++ ++ SY EIY ++
Sbjct: 528 FCLWSNVQWKTHTMEGVLGNESLQGIIPRIVQDIFNYIYGMDENLEFHIKVSYFEIYMDK 349
Query: 152 IRDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEH 211
IRDLL +T L + E + YVK + S +E+ V++ G NR V TNMNEH
Sbjct: 348 IRDLLDVTKTN-LSVHEDKNRVPYVKGCTERFVSSPEEVMEVVDEGKSNRHVAVTNMNEH 172
Query: 212 SSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLS 271
SSRSH++F+I ++ V + + H GKL LVDLAGSE+ +KTGA+G L EA IN S
Sbjct: 171 SSRSHSVFLIHVKQENVDSEKKLH---GKLYLVDLAGSEKVSKTGAEGAVLDEAKNINRS 1
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = -1
Query: 55 KTFTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGK 102
K F FD V N Q +Y T +P+V VL G+NGTIFAYGQT +GK
Sbjct: 641 KVFMFDKVLKPNVTQEYVYTVTAKPIVADVLSGYNGTIFAYGQTSSGK 498
>38050
Length = 809
Score = 71.2 bits (173), Expect(2) = 2e-26, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 50/96 (52%)
Frame = -2
Query: 164 LELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITI 223
L +++ P G Y L S ++IE M G NR+V ATNMN SSR+H I IT
Sbjct: 733 LRIRQHPKNGFYADGLQVVPVVSYEDIEKKMEAGTTNRTVAATNMNATSSRAHTIVGITF 554
Query: 224 ECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQG 259
GE + +NLVDLAGSER TGA G
Sbjct: 553 MQKFKNAAGEETTKSALINLVDLAGSERADSTGATG 446
Score = 67.0 bits (162), Expect(2) = 2e-26, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = -1
Query: 259 GERLKEATKINLSLSALGNVISALVD---GKSTHIPYRDSKLTRLLQDSLGGNAK 310
G+RLKE IN SLS LGN ISAL D GK+ +P+RDS LT+LL+++LGG A+
Sbjct: 449 GDRLKEGAAINQSLSCLGNCISALADKAGGKNVKVPFRDSALTKLLKNALGGTAR 285
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 50/69 (72%)
Frame = -3
Query: 301 LQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQE 360
++ G N+KT+MVA + PA N EETL+TLRYA+RAK IK K VNEDP D L+RE QE
Sbjct: 315 IEKCTGWNSKTIMVAALSPADINYEETLSTLRYADRAKQIKTKAMVNEDPTDKLIRELQE 136
Query: 361 EIARLKAQL 369
E +LKA L
Sbjct: 135 ENDKLKAML 109
>11818
Length = 657
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 105/182 (57%), Gaps = 6/182 (3%)
Frame = -1
Query: 100 TGKTYTMEGVRG-----DPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRD 154
+GKTYTM G D + G+IP +F I+ + + V SYLEIY E++ D
Sbjct: 657 SGKTYTMGGCYDAALSHDDDLVGIIPRILGDLFNGIAERSDYTFKVTVSYLEIYNEDLLD 478
Query: 155 LLS-KDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSS 213
LL Q + L ++E + + +K L S+++ ++ G ++R+ GAT MN+ SS
Sbjct: 477 LLCLPSQRQPLSIREEMNGEIKIKGLKEVEVGSLEDTLMCLSQGARSRTTGATAMNDTSS 298
Query: 214 RSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLS 273
RSHAIF + IE S+ D +H + K +LVDLAGSER KT A+G+R KE +N++++
Sbjct: 297 RSHAIFTVHIEKSKKE-DMNDHC-IAKFHLVDLAGSERAKKTRAEGDRFKEG--VNITVA 130
Query: 274 AL 275
L
Sbjct: 129 CL 124
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = -3
Query: 259 GERLKEATKINLSLSALGNVISALVDG--KSTHIPYRDSKLTRLLQDSLGGNAKTV 312
G +++ K L ALGNVISAL + K HIPYRDSKLTRLLQDSLGGN+ T+
Sbjct: 169 GRQIQRRCKHYRGLLALGNVISALGEDVQKRGHIPYRDSKLTRLLQDSLGGNSHTL 2
>14618
Length = 724
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 97/162 (59%), Gaps = 6/162 (3%)
Frame = -2
Query: 57 FTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTME-GVRGDPEK 115
F+FD V+ + Q ++++E LV S L G+N IFAYGQTG+GKTYTME G+ GD +
Sbjct: 483 FSFDRVFHPDNTQQDVFEE-ISQLVQSALDGYNVCIFAYGQTGSGKTYTMEGGLVGDEDT 307
Query: 116 RGVIPNSFDHIFTHISRSQNQ--QYLVRASYLEIYQEEIRDLLSKDQTKRLELKER---P 170
+G+IP + IF+ Q++ QY S++EIY E I DLLS ++ K ++ + R
Sbjct: 306 KGMIPRAVSQIFSTARELQDKGWQYKFTTSFVEIYNEMIGDLLSSNKXKNVKHEIRMAGR 127
Query: 171 DTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHS 212
D V V +L++ S EI ++ ++NR+V AT NE S
Sbjct: 126 DNNVAVTNLTTVDVTSQHEIAKLLRQASENRAVAATKCNERS 1
>15043
Length = 973
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Frame = +2
Query: 197 GNQNRSVGATNMNEHSSRSHAIFVITIE-----CSEVGLDGENHIRVGKLNLVDLAGSER 251
G + R +GAT++ H +R+HA+F IT+E S+VG+ + LV+LAG E
Sbjct: 26 GRRARRMGATDIKAHRARAHAVFTITVEQKERQSSKVGVRAN-------IMLVELAGCEA 184
Query: 252 QAKTGAQGERLKEATKINLSLSALGNVISALVDGK--STHIPYRDSKLTRLLQDSLGGNA 309
T KI + NV+ AL D K H+PYR+S +TRLLQD+LGGNA
Sbjct: 185 ADATDP---------KILAGTQGVVNVLKALGDSKQIGGHVPYRESLVTRLLQDTLGGNA 337
Query: 310 KTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKAQL 369
T+M+ V P + + T + L+Y AK +KN R+N D ++ E +++I+RL+ ++
Sbjct: 338 MTLMLVTVSPLDKSYQTTQSALQYGQFAKTVKNHARMNLDDTQDIIAEMRQDISRLRDKI 517
>34899
Length = 564
Score = 95.1 bits (235), Expect(2) = 5e-20, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 91/160 (56%)
Frame = +3
Query: 58 TFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGVRGDPEKRG 117
+ D Y +AK ++Y E +V L+G+N TI A+G TG+GK++ M G+ ++ G
Sbjct: 3 SLDGAYGPDAKNGQIYQEKCDSMVQRALEGYNVTIMAFGATGSGKSFLMN---GNDQEIG 173
Query: 118 VIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVK 177
V P +F H+ + N++ +V AS++EI E++ DLL+ + + +++ G++V
Sbjct: 174 VAPMVIQQLFQHLRQRSNKESMVTASFVEILDEKMTDLLNP-HNRPMAVRQHVIKGIFVD 350
Query: 178 DLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHA 217
LS V ++ +E+ + G + R +GAT++ H +R A
Sbjct: 351 GLSEMVARTGEELSQLYEQGRRARRMGATDIKAHRARYDA 470
Score = 21.2 bits (43), Expect(2) = 5e-20, Method: Compositional matrix adjust.
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +1
Query: 213 SRSHAIFVITIE 224
+++HA+F IT+E
Sbjct: 517 TKAHAVFTITVE 552
>17748
Length = 621
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Frame = -3
Query: 83 SVLQGFNGTIFAYGQTGTGKTYTMEG-----VRGDPEKRGVIPNSFDHIFTHISRSQNQQ 137
++ +G+N T+ AYGQTG+GKT++M G ++ D E G+IP +F I +
Sbjct: 379 ALFKGYNATVLAYGQTGSGKTFSMGGCYEASLKLDEEAMGIIPRIIKDLFNGIQERPDHT 200
Query: 138 YLVRASYLEIYQEEIRDLLSK-DQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNV 196
+ V SYLEIY EE+ BLL Q + L ++E + + +K L SV + ++
Sbjct: 199 FKVTVSYLEIYNEELLBLLCPLSQRQPLTIREELNGEIKIKGLKEVTVGSVDDTLDCLSQ 20
Query: 197 GNQNRS 202
G Q R+
Sbjct: 19 GAQLRT 2
>36593
Length = 466
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +1
Query: 296 KLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRA 337
KLT LLQ+SLGGN+KT+M NV P N ETL +LR+A +
Sbjct: 1 KLTYLLQNSLGGNSKTLMFVNVSPKEENFSETLNSLRFATKV 126
>38061
Length = 206
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -3
Query: 313 MVANVGPASYNVEETLTTLRYANRAKNI 340
+VA V PA N+EETL TLRYA+RA+ I
Sbjct: 84 LVACVSPADSNMEETLNTLRYADRARKI 1
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6753620|ref|NP_034158.1| DEAD/H (Asp-Glu-Ala-Asp/His)
box polypeptide 3, X-linked [Mus musculus]
(662 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01517 424 e-119
00621 290 1e-78
17544 277 9e-75
04883 222 3e-58
09327 219 4e-57
01062 208 6e-54
09316 167 2e-41
33025 159 2e-40
02054 95 5e-33
00739 130 1e-30
00162 118 2e-30
02498 78 3e-30
07310 125 6e-29
22006 103 2e-22
30136 101 7e-22
14337 99 7e-21
19525 96 4e-20
19640 93 1e-19
34295 83 3e-16
12995 82 5e-16
19172 81 1e-15
00617 78 1e-14
11160 65 8e-13
39583 71 2e-12
11624 70 2e-12
17708 69 6e-12
19151 63 4e-10
12121 62 6e-10
10649 55 7e-08
31220 55 9e-08
03381 54 2e-07
08036 53 3e-07
31899 52 9e-07
11423 44 2e-04
06438 44 2e-04
33083 43 4e-04
34134 41 0.001
01797 41 0.002
31113 39 0.005
01821 36 0.056
18180 33 0.48
33543 32 1.0
>01517
Length = 2605
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/252 (82%), Positives = 227/252 (90%), Gaps = 2/252 (0%)
Frame = +2
Query: 328 VDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPK 387
VDMMERGKIG+D C YLVLDEADRMLDMGFEPQIRRIVE+DTMPP G R T+MFSATFPK
Sbjct: 2 VDMMERGKIGMDHCNYLVLDEADRMLDMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPK 181
Query: 388 EIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNA--TGKDSLTL 445
EIQ+LARDFLD YIFLAVGRVGSTSENITQKVVWVEE +KRSFLLDLL A TG +SLTL
Sbjct: 182 EIQLLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEPEKRSFLLDLLMASGTGPESLTL 361
Query: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
VFVETKKGADSLE FL +E Y TSIHGDRSQR+RE+AL F++G PILVATAVAARGL
Sbjct: 362 VFVETKKGADSLEQFLMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVAARGL 541
Query: 506 DISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQ 565
DI NV+HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN++N NI +D+LDLL EA Q
Sbjct: 542 DIPNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNIARDMLDLLTEANQ 721
Query: 566 EVPSWLENMAFE 577
EVPSWLE++A++
Sbjct: 722 EVPSWLESLAYD 757
>00621
Length = 2263
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 240/421 (57%), Gaps = 21/421 (4%)
Frame = +1
Query: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
+D + G P I + + ++G IM I+ Y PTP+Q AIPI + RD++
Sbjct: 205 EDYNISCKGGRIPNPIRFWKESDLGADIMEVIDRVGYKEPTPIQMQAIPIGLQNRDIIGV 384
Query: 224 AQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
A+TGSGKTAAFL+P+L I +++ + R Q P +++LAPTRELA QI
Sbjct: 385 AETGSGKTAAFLIPLLVWI---------QSLPKIERLEDADQGPYAVILAPTRELAQQIE 537
Query: 284 EEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
EE RKF +R V GG +Q L++GC +++ATPGR++D++E + L+ C Y
Sbjct: 538 EETRKFGEGLGIRVVSVIGGISREEQGFKLQQGCEVVIATPGRMIDVLENRYLVLNQCTY 717
Query: 344 LVLDEADRMLDMGFEPQIRRIVE---------------------QDTMPPKGVRHTMMFS 382
+V+DEADRM++MGFEP++R+I++ Q+ R T+MF+
Sbjct: 718 VVMDEADRMINMGFEPEVRKILDYLPVSNQKPDNDDAEDDLKMLQNFKSKHKYRQTVMFT 897
Query: 383 ATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDS 442
AT P +++ LAR FL + +G VG E + Q V + E +KR L+++LNA G D
Sbjct: 898 ATMPPQVERLARTFLRRPTVVYIGNVGKPVERVEQIVYMLTESEKRKKLIEVLNA-GVDP 1074
Query: 443 LTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 502
++FV KKGAD L L G+ T++HG + Q RE AL + G I+VAT VA
Sbjct: 1075PIIIFVNQKKGADVLAKSLEKMGFNATTLHGGKGQEQREYALASLKGGAKDIMVATDVAG 1254
Query: 503 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVE 562
RG+DI +V V+N+D+ IE+Y HRIGRTGR G G + +F + + + DL L++
Sbjct: 1255RGIDIKDVSLVLNYDMARTIEDYTHRIGRTGRAGKEGTSITFLTKEDSMVFYDLKQLMLS 1434
Query: 563 A 563
+
Sbjct: 1435S 1437
>17544
Length = 1047
Score = 277 bits (709), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 163/201 (81%), Gaps = 1/201 (0%)
Frame = +2
Query: 119 FERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPH 178
+ R N + C + ++DWS PLP + RLEQELF G NTGINF+KY+DIPVEATG++ PPH
Sbjct: 449 YNRWDNRQDCQQDGKEDWSVPLPQNSRLEQELFGGNNTGINFDKYEDIPVEATGDSPPPH 628
Query: 179 IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPI 238
I SF + +GEII NI L++Y +PTPVQK A+PI+ KRDLMACAQTGSGKTAAFLLPI
Sbjct: 629 INSFEECTLGEIIRNNIVLSKYNKPTPVQKFALPIVLGKRDLMACAQTGSGKTAAFLLPI 808
Query: 239 LSQIYADGPG-EALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 297
L+Q+Y +GP EAL+ + G RRK YPI+L+LAPTRELA QIY+EARKF+YRSR+RP
Sbjct: 809 LNQVYENGPTPEALQQNQSRGY--RRKMYPIALILAPTRELASQIYDEARKFAYRSRLRP 982
Query: 298 CVVYGGAEIGQQIRDLERGCH 318
CVVYGGA+IG Q+RDL++GCH
Sbjct: 983 CVVYGGADIGAQMRDLDKGCH 1045
>04883
Length = 1155
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/270 (44%), Positives = 163/270 (60%), Gaps = 1/270 (0%)
Frame = +3
Query: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
+ +G P I +F++V + +M + +T PTP+Q + P+ +DL+ AQTG
Sbjct: 324 ISVSGKFVPNPILTFTEVNFPDYVMNQVRRNSWTAPTPIQSQSWPVAMAGKDLVGIAQTG 503
Query: 228 SGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
SGKT AF+LP + I Y R PI L L PTRELA Q+ E A+
Sbjct: 504 SGKTLAFMLPAIVHINHQA-------------YLERGDGPIVLALVPTRELAQQVQEVAQ 644
Query: 288 KFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLD 347
+F + SRVR VYGGA G Q+RDLERG + +ATPGRL+D +E + L C YLVLD
Sbjct: 645 EFGHASRVRSVCVYGGAPRGPQLRDLERGAEICIATPGRLIDFLESNRTNLRRCTYLVLD 824
Query: 348 EADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGR 407
EADRMLDMGFEPQIR+I+EQ + R T+M+SAT+PKE++ LA DF+DEY+ + +G
Sbjct: 825 EADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVRKLAEDFIDEYVQVNIGA 992
Query: 408 VGSTS-ENITQKVVWVEEIDKRSFLLDLLN 436
+ T+ NI Q + E +K L+ LLN
Sbjct: 993 LELTANHNILQIIDVCMEHEKEDKLVKLLN 1082
>09327
Length = 1087
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Frame = +2
Query: 271 VLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDM 330
+L PTRELA Q+ E A +F + SRVR VYGGA+ G Q+R+L+RG + +ATPGRL+D
Sbjct: 20 LLVPTRELAQQVQEVAVEFGHSSRVRSVCVYGGAQRGPQLRELDRGAEICIATPGRLIDF 199
Query: 331 MERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 390
+E + L C YLVLDEADRMLDMGFEPQIR+IVEQ + P R T+M+SAT+PKE++
Sbjct: 200 LESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQ--IRPD--RQTLMWSATWPKEVR 367
Query: 391 MLARDFLDEYIFLAVGRVGSTS-ENITQKVVWVEEIDKRSFLLDLLN--ATGKDSLTLVF 447
LA DF+ EY + +G + T+ NI Q + + +K L+ LLN K++ TL+F
Sbjct: 368 KLAEDFIMEYTQINIGALQLTANHNILQIIDVCMDHEKEEKLVKLLNEIMQEKENRTLIF 547
Query: 448 VETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
VETK+ D + + +G+ IHGD+SQ++R+ L+ FR+G+ P+L+AT VA+RGL
Sbjct: 548 VETKRKCDDIHRRMKRDGWPVLCIHGDKSQQERDWVLNDFRNGRCPVLLATDVASRGL 721
>01062
Length = 2138
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 210/404 (51%), Gaps = 4/404 (0%)
Frame = -3
Query: 157 GINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKE 216
+ FE +D+ V T F ++ + E ++ I + +P+ +Q+ A+ I +
Sbjct: 2118 AVEFETSEDVEVTPT----------FDNMGIREELLRGIYAYGFEKPSAIQQRAVKPIVK 1969
Query: 217 KRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTR 276
RD++A AQ+G+GKTA F + +L + LR + +L+L+PTR
Sbjct: 1968 GRDVIAQAQSGTGKTATFSISVLQCLDIQ-----LRETQ-------------ALILSPTR 1843
Query: 277 ELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKI 336
ELA QI + V+ GG IG+ IR L+ G H++ TPGR+ DM++R +
Sbjct: 1842 ELATQIQKVMLALGDYMNVQCHSCIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIKRRNL 1663
Query: 337 GLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDF 396
K ++LDEAD ML+ GF+ QI + +PP ++ SAT P EI + F
Sbjct: 1662 RTRSIKMMILDEADEMLNKGFKEQIYDVYRY--LPPAT--QVILISATLPHEILEMTNKF 1495
Query: 397 LDEYIFLAVGRVGSTSENITQKVVWVE----EIDKRSFLLDLLNATGKDSLTLVFVETKK 452
+ + I + V R T E I Q V VE + D L D L T ++F TK+
Sbjct: 1494 MTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ----AVIFCNTKR 1327
Query: 453 GADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKH 512
D L + + + +S+HGD Q++RE + FR+G S +L+ T V ARG+D+ V
Sbjct: 1326 KVDWLTEKMREANFTVSSMHGDMPQKEREAIMKVFRAGDSRVLITTDVWARGIDVQQVSL 1147
Query: 513 VINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDL 556
VIN+DLP++ E Y+HRIGR+GR G G+A +F +I I +D+
Sbjct: 1146 VINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDI 1015
>09316
Length = 2312
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 187/385 (48%), Gaps = 4/385 (1%)
Frame = +2
Query: 169 EATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGS 228
+ G H F D + ++ I + P+ VQ IP D++ A++G
Sbjct: 812 DVKGTYVSIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQHECIPQAILSMDVLCQAKSGM 991
Query: 229 GKTAAFLLPILSQIY-ADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
GKTA F+L L Q+ DG L V+A TRELA QI +E
Sbjct: 992 GKTAVFVLATLQQLEPVDGQVSVL-------------------VMAHTRELAFQISKEYE 1114
Query: 288 KFS-YRSRVRPCVVYGGAEIGQQIRDLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLV 345
+FS Y + V+ V +GG + + L + C H++V TPGRL + + + L K+ +
Sbjct: 1115 RFSKYMNNVKIAVFFGGMSVKKDEEVLSKNCPHIVVGTPGRLHALAKANNLNLKKIKHFI 1294
Query: 346 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 405
LDE D+ML + +RR V++ + MMFSAT KEI+ + + F+ + + + V
Sbjct: 1295 LDECDKMLA---DLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPICKKFMQDPMEVYV 1465
Query: 406 GRVGS-TSENITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHE 464
T + Q +++ +K L +LL+ + + ++FV++ +L L +
Sbjct: 1466 DDDSKLTLHGLQQHYCKLKDNEKNRKLFELLDVLEFNQV-IIFVKSVPRCMALSQLLLEQ 1642
Query: 465 GYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEE 524
+ +IH +Q +R QF+ + ILVAT + RG+DI V V N+D+P D +
Sbjct: 1643 NFPAIAIHRQMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 1822
Query: 525 YVHRIGRTGRVGNLGLATSFFNERN 549
Y+HR+ R GR G GLA +F ++ N
Sbjct: 1823 YLHRVARAGRFGTKGLAITFVSDEN 1897
>33025
Length = 558
Score = 159 bits (403), Expect(2) = 2e-40, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 107/158 (67%)
Frame = +3
Query: 282 IYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC 341
IY EA KFS + V P VVYG + Q + +G +L+V TPGRL+D + I L C
Sbjct: 3 IYGEAYKFSRGTDVHPSVVYGATDRRYQKSRIMKGANLVVGTPGRLLDFIGDQTISLGKC 182
Query: 342 KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI 401
+YL+LDEADRMLDMGFEP+IR++V+ MPPK R T+MFSATF ++IQ LA DFL++Y+
Sbjct: 183 QYLILDEADRMLDMGFEPEIRKLVDTHGMPPKTQRQTLMFSATFKEDIQRLAGDFLNDYL 362
Query: 402 FLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATG 439
F+ VG VG ++TQ + V+ + KR L ++LN G
Sbjct: 363 FITVGIVGGACSDVTQTFLEVDRLQKRDHLCEILNEMG 476
Score = 24.6 bits (52), Expect(2) = 2e-40, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 445 LVFVETKKGADSLEDFLYHEGY 466
LVFV K+ AD L +L GY
Sbjct: 490 LVFVGQKRNADFLASYLSQSGY 555
>02054
Length = 1110
Score = 95.1 bits (235), Expect(2) = 5e-33, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 97/178 (54%)
Frame = -3
Query: 392 LARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETK 451
L R L + + + V T + + Q +++ K ++L+ +LN +S +VF T
Sbjct: 784 LQRASLRDPVKVEVSNKYQTVDTLQQSYLFIPAKYKDAYLVSILNELAGNSF-MVFCSTC 608
Query: 452 KGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVK 511
+ L + G+ +HG SQ R +L++F+S IL+AT VA+RGLDI +V
Sbjct: 607 ANTQRVALLLRNLGFTAIPLHGQMSQAKRLGSLNKFKSKDRSILIATDVASRGLDIPHVD 428
Query: 512 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPS 569
V+N D+P+ ++Y+HR+GRT R G G A +F ++ ++ + + + L+ + E P+
Sbjct: 427 VVLNLDIPTHSKDYMHRVGRTARAGRSGRAITFVSQYDVELYQRIEHLIGKKLSEYPT 254
Score = 65.1 bits (157), Expect(2) = 5e-33, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = -2
Query: 283 YEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFC 341
+E+A FS VR +V G ++ Q L + H+++ATPGRLVD +E K L
Sbjct: 1085 WEKALAFS----VR*LLV--GIDMSTQALMLGKKPHIIIATPGRLVDHLENTKGFSLRAL 924
Query: 342 KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEI 389
K+LV+DEADR+LDM F+ ++ +I++ +P + R+T +FSAT ++
Sbjct: 923 KFLVMDEADRILDMNFQDEVDKILK--VIPRE--RNTYLFSATMTNKV 792
>00739
Length = 1313
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Frame = +3
Query: 305 EIGQQIRDLERGCHLLVATPGRLVDMMER-GKIGLDFCKYLVLDEADRMLDMGFEPQIRR 363
++ +Q +DL H++++TPGRL D ++ L K+LV+DEADR+LD F Q+
Sbjct: 6 DMMKQGQDLAVKPHIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDDNFGAQLEP 185
Query: 364 IVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVE 423
I+ + +P R T++FSAT + L L++ +T + + + V V
Sbjct: 186 ILTR--LP--SARQTLLFSATLSPTVNALRDSVLNKPFVWIQQSERATVDELQEDYVLVP 353
Query: 424 EIDKRSFLLDLLNATGKD---SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR 480
K ++++ +L+ KD S ++F T K A L L ++C +H QR R
Sbjct: 354 ASMKDAYMVHILDHWLKDHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFR 533
Query: 481 EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL 540
+L +F+S ++ IL++T VA+RGLDI V +IN ++P+ +YVHR+GRT R G G
Sbjct: 534 LSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDYVHRVGRTARAGRCGQ 713
Query: 541 ATSFFNERNINITKDL 556
+ S E +I + K +
Sbjct: 714 SISLVTEFDIKLIKSI 761
>00162
Length = 2322
Score = 118 bits (295), Expect(2) = 2e-30, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Frame = +3
Query: 269 SLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLV 328
+L++ PTRELA QIYE K +V GG + ++ + + ++++ T GRL+
Sbjct: 144 ALIITPTRELAFQIYEVLNKIRTFHDFSANLVIGGKFMWRETHLMGKT-NIVICTVGRLL 320
Query: 329 DMMERGK-IGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPK 387
+E + + K LVLDEADR++D F + I+ +PP R T++FSAT
Sbjct: 321 HHLESTQAFDVSELKVLVLDEADRIMDSKFAQDMDSIMSH--LPP---RQTLLFSATQTM 485
Query: 388 EIQMLARDFLDEYIFLAVGRVGS--TSENITQKVVWVEEIDKRSFLLDLLNATGKDSLTL 445
++ LAR L + +++V R T + Q + E +K S L L + + +
Sbjct: 486 SVKTLARLSLKDPSYVSVDRHAEYVTPTGLEQSYIVCELHEKLSLLYSFLKNHPNNKI-M 662
Query: 446 VFVETKKGADSLEDFLYHE--GYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAAR 503
VF++T K A + + E G + +HG Q R + +F + IL+ T +A R
Sbjct: 663 VFLQTCKQARYVHTVIKRERPGMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACR 842
Query: 504 GLDISNVKHVINFDLPSDIEEYVHRIGRTGR 534
GLD V VI D P D+ Y+HR GRT R
Sbjct: 843 GLDFPAVNWVIQLDCPVDVNTYIHRAGRTAR 935
Score = 33.5 bits (75), Expect(2) = 2e-30, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 219 DLMACAQTGSGKTAAFLLPILSQI 242
D++ A+TGSGKT AFL+PIL +
Sbjct: 38 DVLGAAKTGSGKTLAFLIPILETL 109
>02498
Length = 1955
Score = 77.8 bits (190), Expect(2) = 3e-30, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Frame = +3
Query: 401 IFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSL--TLVFVETKKGADSLE 458
+ +++ R + +NI Q +++ + + L N G S+ +++F + A L
Sbjct: 738 VIISLKREEESLDNIKQ--YYIDCNSQEEKYVALCNIYGSISVGQSMIFCHKRSTAAWLA 911
Query: 459 DFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDL 518
+ + + +A + G+ + R + +FR GK +L+ T V+ARG+D+ V V+NFDL
Sbjct: 912 ERMTADHHAVGLLTGELTIEQRAAIIKRFREGKEKVLITTNVSARGIDVEMVTVVVNFDL 1091
Query: 519 P------SDIEEYVHRIGRTGRVGNLGLATSFF-NERNINITKDL 556
P D E Y+HRIGRTGR G G+A + N R++ I + +
Sbjct: 1092PVTQDWRPDCETYLHRIGRTGRFGKNGIAINMVDNSRSMAIMRSI 1226
Score = 72.8 bits (177), Expect(2) = 3e-30, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 12/245 (4%)
Frame = +1
Query: 165 DIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPII--KEKRDLM 221
DI V N P + ++SF + + ++ + + P+ +Q+ A+PI+ +++
Sbjct: 85 DIEVLRKDPNSPLYSVKSFEALNLKPQLLKGVYDMGFNAPSKIQETALPILLADPPVNMI 264
Query: 222 ACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQ 281
A +Q+G+GKTAAF+L +LS R + +P L LAPT ELA+Q
Sbjct: 265 AQSQSGTGKTAAFVLTMLS------------------RVDISQTFPQCLCLAPTYELALQ 390
Query: 282 IYEEARKFS-------YRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERG 334
I E K S R VR V G + +QI ++ TPG ++D R
Sbjct: 391 IGEVIEKMSKHMTGLEIRYAVRGERVNRGEVLSEQI---------VIGTPGTVMDWSHRF 543
Query: 335 K-IGLDFCKYLVLDEADRMLDM-GFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML 392
K + L+ + VLDEAD M+ M G + Q RI ++ + G + ++FSAT+ + +
Sbjct: 544 KALPLEKLRVFVLDEADVMISMQGHQDQSTRIQKRLS---SGCQ-MLLFSATYDQVVMQF 711
Query: 393 ARDFL 397
A+ +
Sbjct: 712 AQRII 726
>07310
Length = 712
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 119/219 (54%)
Frame = +2
Query: 326 RLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 385
R++D+M + + D C LVLDEAD++L F+ + I+ +PP+ R +++SATF
Sbjct: 2 RILDLMNKRLVKPDTCGILVLDEADKLLSQDFKGMLDNIIAH--LPPQ--RQILLYSATF 169
Query: 386 PKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSLTL 445
P ++ + +L + + T + +TQ +V+E ++ L+ L + + + ++
Sbjct: 170 PLSVEQFMKKYLKNPYEINLME-ELTLKGVTQYYAFVQE-KQKVHCLNTLFSKLQINQSI 343
Query: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
+F + + + L + GY+C IH +Q+ R H FR G LV + + RG+
Sbjct: 344 IFCNSTQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGI 523
Query: 506 DISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 544
DI V VINFD P E Y+HRIGR+GR G+LG+A +
Sbjct: 524 DIQAVNVVINFDFPKHAETYLHRIGRSGRYGHLGVAINL 640
>22006
Length = 3414
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 89/153 (58%)
Frame = +2
Query: 203 PTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGR 262
PTP+Q+ IP+I E +D++A A+TGSGKTAAFL+P+L + +K + G
Sbjct: 3005 PTPIQRKTIPVIMEGKDMVAMARTGSGKTAAFLVPMLER------------LKMHSSKGA 3148
Query: 263 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVA 322
R +L+L+PTRELA+Q + ++ +R V+ GG + Q L + +++A
Sbjct: 3149 R-----ALILSPTRELALQTLKFTKELGKFLDLRAAVILGGDRMEDQFSALHQNPDIIIA 3313
Query: 323 TPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 355
TPGRL+ ++ K L Y+V DEADR+ +M
Sbjct: 3314 TPGRLLHVLVEMKKSLKEVIYVVFDEADRLFEM 3412
>30136
Length = 524
Score = 101 bits (252), Expect = 7e-22, Method: Composition-based stats.
Identities = 58/160 (36%), Positives = 85/160 (53%)
Frame = +2
Query: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
D+ + G P I+ F++ + + ++ I Y PTP+Q PI + +
Sbjct: 86 DEHEITVRGQAANP-IQDFAEAYLPDYVIKEIRRQGYKSPTPIQAQGWPIAMSGANFVGI 262
Query: 224 AQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
A+TGSGKT ++LP + I P + R + PI+LVLAPTRELA QI
Sbjct: 263 AKTGSGKTLGYILPAIVHINNQQPLQ-------------RGEGPIALVLAPTRELAQQIQ 403
Query: 284 EEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVAT 323
+ A +F S VR V+GGA G Q+RDL+RGC +++AT
Sbjct: 404 QVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 523
>14337
Length = 693
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 75/127 (59%)
Frame = +2
Query: 445 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 504
LVFV++K+ A L + + +IH D+ Q +R+ + F G+ +LV T + RG
Sbjct: 68 LVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDATVRAFTEGRVWVLVCTELMGRG 247
Query: 505 LDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAK 564
+D + VIN+D P++ Y+HRIGRTGR G G A +FF E+++ + + +++ EA
Sbjct: 248 IDFKGINLVINYDFPTNAVSYIHRIGRTGRAGVPGRAITFFTEQDVTHLRSIANIIKEAG 427
Query: 565 QEVPSWL 571
EVP ++
Sbjct: 428 CEVPEYM 448
>19525
Length = 585
Score = 96.3 bits (238), Expect = 4e-20, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Frame = +2
Query: 270 LVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVD 329
LVL PTRELAVQ+Y+ ++ S +++ C+ GG +I Q L ++VATPGRL+D
Sbjct: 23 LVLVPTRELAVQVYQVGQQISQYTKISICLAAGGLDIKGQEAALRLCPDIVVATPGRLID 202
Query: 330 MMERG-KIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKE 388
+ + + LVLDEADRMLD F Q+ I+ R TM+FSAT
Sbjct: 203 HLHNAPNFTIAHVEILVLDEADRMLDEYFAAQMTEIIRMCNFQ----RQTMLFSATMSDA 370
Query: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV---EEIDKRSFLLDLLNATGKDSLTL 445
+Q LA L E + + V + + + Q+ V + +E D+ + + L++ T D +
Sbjct: 371 VQDLASVSLKEAVKVFVNQNTDIALGLQQEFVRIRENKEGDREAIVSSLVSRTFCDK-CM 547
Query: 446 VFVETK 451
VF++TK
Sbjct: 548 VFLQTK 565
>19640
Length = 456
Score = 92.8 bits (229), Expect(2) = 1e-19, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = -1
Query: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
+F T++ D L + + +++HGD QRDRE + QFRSG S +L+ T + ARG+
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 506 DISNVKHVINFDLPSDIEEYVHRIGRTG 533
D+ V VIN+DLPS+ E Y+HRIGR G
Sbjct: 276 DVQQVSLVINYDLPSNRENYIHRIGRGG 193
Score = 22.3 bits (46), Expect(2) = 1e-19, Method: Compositional matrix adjust.
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = -3
Query: 534 RVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENM 574
R G G+A +F + + I KD+ +E+P+ + ++
Sbjct: 193 RFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADL 71
>34295
Length = 694
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%)
Frame = -1
Query: 444 TLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAAR 503
++F TKK L L + +HG Q++R AL +F+S L+AT VAAR
Sbjct: 535 VMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLIATDVAAR 356
Query: 504 GLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEA 563
GLDI +V+ VIN LP +EY+HR+GRT R G G+A S F +D L+LL
Sbjct: 355 GLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGVAISIF-----RFPRD-LELLGAI 194
Query: 564 KQEVPSWLENMAFEHH 579
++E+ + L + H
Sbjct: 193 EEEINTKLTEHPIDEH 146
>12995
Length = 1072
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +3
Query: 426 DKRSFLLDLL-NATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEAL 484
DK + LL LL + ++ LT+VFV TK + L L G ACT I+ Q R+ +
Sbjct: 81 DKEAMLLYLLRDVISENDLTVVFVATKHHVEYLNTLLTKCGIACTYIYSSLDQTARKIHV 260
Query: 485 HQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 544
+F + +++ T +AARG+DI + +V+NF P+ + +VHR+GR R G G A S
Sbjct: 261 AKFTHKQVKVMLVTDLAARGIDIPQLDNVVNFHFPAKAKLFVHRVGRVARAGRSGTAYSL 440
>19172
Length = 484
Score = 80.9 bits (198), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Frame = -1
Query: 395 DFLDEYIFLAVGRVG-STSENITQKVVWVEEIDKRSFLLDLLNATG--KDSLTLVFVETK 451
+FL+ YI + +G + S + NI Q V +E +K + L+ LL ++ T++FVETK
Sbjct: 484 EFLNNYIQVNIGSLSLSANHNILQIVDVCDESEKIAKLIQLLTQISGENETKTIIFVETK 305
Query: 452 KGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVK 511
K D + + +G+ +IHGD+SQ++R+ L FR+G+ ILVAT VAARGL +
Sbjct: 304 KRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLG----E 137
Query: 512 HVINFDLPS 520
+ F LP+
Sbjct: 136 FFVAFALPA 110
>00617
Length = 1505
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%)
Frame = -3
Query: 466 YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEY 525
++C +H QR R +L +F+S ++ IL++T VA+RGLDI V +IN ++P+ +Y
Sbjct: 1482 FSCAVLHSMIPQRFRLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIPNRPRDY 1303
Query: 526 VHRIGRTGRVGNLGLATSFFNERNINITKDL 556
VHR+GRT R G G + S E +I + K +
Sbjct: 1302 VHRVGRTARAGRCGQSISLVTEFDIKLIKSI 1210
>11160
Length = 646
Score = 64.7 bits (156), Expect(2) = 8e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 18/195 (9%)
Frame = -1
Query: 302 GGAEIGQQI-RDLERGCHLLVATPGRLVDMMERGKIGLDFC------KYLVLDEADRMLD 354
GG I + ++ G +L+ATPGRL D+ R + G + + LVLDEADR+LD
Sbjct: 646 GGVSCSHDISKFMKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLLD 467
Query: 355 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG----- 409
MGFE I I+ PK +R T +FSAT E++ L R L + + V
Sbjct: 466 MGFEASINTILGH---LPK-LRRTGLFSATQTDEVENLIRAGLRNPLRVTVKEKKLAGEA 299
Query: 410 --STSENITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGAD----SLEDFLYH 463
T ++ + VE +K S L+ L +D L L+F T D L L H
Sbjct: 298 DQRTPSTLSNYYMIVEAEEKFSQLVKFLKTHHRDKL-LLFFSTCACVDYFSMCLTQLLKH 122
Query: 464 EGYACTSIHGDRSQR 478
SIH Q+
Sbjct: 121 --MQVLSIHSKMKQK 83
Score = 27.3 bits (59), Expect(2) = 8e-13, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -3
Query: 476 SQRDREE---ALHQFRSGKSPILVATAVAARGLD 506
SQ+D E +FRS S +LV T V ARG+D
Sbjct: 104 SQQDEAEEKPVFAKFRSITSGLLVCTDVMARGVD 3
>39583
Length = 234
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = -3
Query: 480 REEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVG 536
R EAL +F+ G+ +L+AT +A+RGLDI VK VINF +PS ++ YVHR+GRT R G
Sbjct: 172 RLEALKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTLKHYVHRVGRTARAG 2
>11624
Length = 2257
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = -1
Query: 480 REEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLG 539
R++ L QF GK +LV + ARG+D+ NVK+VI++D P I+ Y+HR+GRT R G G
Sbjct: 784 RKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNPPYIKTYIHRVGRTARAGRAG 605
Query: 540 LATSFFNERNINITKDLL 557
A S ++ K ++
Sbjct: 604 TAISLLEKKEFFHFKQMM 551
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Frame = -3
Query: 218 RDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 277
RD+ A TGSGKT A+ LPI ++ +K+ R + ++++ P R+
Sbjct: 1814 RDICVSAPTGSGKTLAYTLPI------------IQCLKQ-----RMVPHVRAVIVLPVRD 1686
Query: 278 LAVQIYEEARKFSYRSRVRPCVVYG----GAEIGQQIRDLERGCH-----LLVATPGRLV 328
LA Q+Y+ + + ++ +V G E ++ G + +LVATPGRLV
Sbjct: 1685 LAEQVYQVFCHYCADTPLKVGIVVGKTVFNVEQDTLVKKRYGGVYHSVIDILVATPGRLV 1506
Query: 329 DMMERGK-IGLDFCKYLVLDEADRMLD 354
D + L ++LV+DEADRM++
Sbjct: 1505 DHINSTPGFDLSHLRFLVIDEADRMME 1425
>17708
Length = 882
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%)
Frame = +1
Query: 218 RDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 277
RDLM A+TGSGKT AFL+P + +Y L+ M NG ++++PTRE
Sbjct: 553 RDLMGAAKTGSGKTLAFLIPAIELMY------KLKFMPRNGTG--------CIIISPTRE 690
Query: 278 LAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMME 332
L++Q + + ++ GG +++ L++G +++VATPGRL+D ++
Sbjct: 691 LSMQTFNVLTELLKYHHHTFGLIMGGVNRHDEVKKLKKGVNIIVATPGRLLDHLQ 855
>19151
Length = 625
Score = 62.8 bits (151), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Frame = -3
Query: 494 ILVATAVAARGLDISNVKHVINFDLP------SDIEEYVHRIGRTGRVGNLGLATSFFN- 546
+L+ T V +RG+DI V V+NFDLP +D E Y+HRIGRTGR G G+A + +
Sbjct: 620 VLITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIAINLIDG 441
Query: 547 ERNINITK 554
E+++N+ +
Sbjct: 440 EKSMNVCR 417
>12121
Length = 465
Score = 62.4 bits (150), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = -3
Query: 319 LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 362
+ +ATPGRL+D +E + L C YLVLDEADRMLDMGF P R
Sbjct: 463 ICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFXPP*R 332
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -2
Query: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
+ +G P I +F + + + +M I +T PTP+Q + PI +DL+ AQTG
Sbjct: 188 ITLSGRYLPNPILTFEEANLPDYVMSQIHRNNWTSPTPIQSQSWPIAMSGKDLVGIAQTG 9
Query: 228 SG 229
SG
Sbjct: 8 SG 3
>10649
Length = 472
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +1
Query: 465 GYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEE 524
G + +HG Q R + +F + IL+ T +A RGLD V VI D P D+
Sbjct: 64 GMSVLVLHGGIPQLRRLDIYREFCRKQHVILITTDLACRGLDFPAVNWVIQLDCPVDVNT 243
Query: 525 YVHRIGRTGR 534
Y+HR GRT R
Sbjct: 244 YIHRAGRTAR 273
>31220
Length = 818
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +2
Query: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITK 554
A+RG+D V +VINFD P D+ Y+HR GRT R N G SF + + + I +
Sbjct: 161 ASRGIDFQGVNNVINFDFPLDVTSYIHRAGRTARGNNTGSVLSFVSVKELPINQ 322
>03381
Length = 1206
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 505 LDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAK 564
LDI +++ V+N+D+ DI+ + HR+GRTGR G G A + +++ L+ L A
Sbjct: 3 LDIPHIRTVVNYDVARDIDTHTHRVGRTGRAGEKGSAYTLITDKDKEFAPLLVRNLEGAN 182
Query: 565 QEVPSWLENMA 575
Q P L ++A
Sbjct: 183 QTPPPALLDLA 215
>08036
Length = 1226
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +3
Query: 502 ARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLV 561
ARG+D NV +VINF+ P ++ Y+HR+GRT R G A S + R+ N + ++
Sbjct: 612 ARGIDFQNVSNVINFEFPKTVDAYIHRVGRTARGDKQGCALSLIS-RHENDQFEAVEEAQ 788
Query: 562 EAKQEVPSWLENMAF 576
+ ++ PS + F
Sbjct: 789 KTDKDSPSVFKPFMF 833
>31899
Length = 453
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%)
Frame = -1
Query: 182 FSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQ 241
F+ + + + ++ ++ + RP+P+Q AIP+ + DL+ A++G+GKT F
Sbjct: 339 FASLLLSKPVLNGLKNAGFERPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVF------- 181
Query: 242 IYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
++ A++ R Q LVLAPTRE+A+QI+E
Sbjct: 180 --------SVVALEGIETTARSTQV---LVLAPTREIALQIWE 85
>11423
Length = 1434
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = -2
Query: 511 KHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLL 557
K+VI++D P I+ Y+HR+GRT R G G A S ++ K ++
Sbjct: 1397 KYVISYDNPPYIKTYIHRVGRTARAGRAGTAISLLEKKEFFHFKQMM 1257
>06438
Length = 989
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 496 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 534
+ +A RGLD V VI D P D+ Y+HR GRT R
Sbjct: 25 LTVTLACRGLDFPAVNWVIQLDCPVDVNTYIHRAGRTAR 141
>33083
Length = 1931
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 503 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGR-VGNLGLATSFFNERNINITKDLLDLLV 561
RGLDI V ++ +D P + +EY+HR+GRT R G+ G A + K L V
Sbjct: 1 RGLDIPQVDWIVQYDPPDESKEYIHRVGRTARGEGSSGKALLLLQPEELGFLKFLRAAKV 180
Query: 562 EAKQEVPSW 570
+ ++ +W
Sbjct: 181 KVQEMDFNW 207
>34134
Length = 271
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 31/65 (47%)
Frame = +3
Query: 211 IPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISL 270
+PI RD + AQTGSGKT +F+LP + I E R PI+L
Sbjct: 84 VPIAMSGRDCVGIAQTGSGKTLSFILPAIVHINHQPTLE-------------RGDGPIAL 224
Query: 271 VLAPT 275
VL PT
Sbjct: 225 VLVPT 239
>01797
Length = 1448
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = -3
Query: 440 KDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR---SGKSPILV 496
+DS L+F + + D LED+ + G+ + G DR++++ +F S K ++
Sbjct: 573 QDSRVLIFSQMTRMLDILEDYCFWRGFDYCRLDGSTPHEDRQKSILEFNAPDSSKFVFML 394
Query: 497 ATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVG 536
+T G++++ VI +D + + + + R R+G
Sbjct: 393 STRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIG 274
>31113
Length = 500
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Frame = +3
Query: 445 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP---ILVATAVA 501
LVF + +ED+L + G + G DR + L F SP L++T
Sbjct: 78 LVFCQMTSLMSIMEDYLMYRGIRYLRLDGMTKSEDRGQLLEMFNRKDSPYFLFLLSTRAG 257
Query: 502 ARGLDISNVKHVINFDLPSD--------IEEYVHRIGRTGRVGNLGLAT 542
GL++ VI FD SD ++ HRIG+ V L L T
Sbjct: 258 GLGLNLQTADTVIIFD--SDWNPHQDLQAQDRAHRIGQKNEVRVLRLMT 398
>01821
Length = 910
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 495 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 534
LV+T V GLDI +V ++ +D V R+GRTGR
Sbjct: 13 LVSTCVGEEGLDIGDVDLIVCYDAHKSPVRLVQRMGRTGR 132
>18180
Length = 1017
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = -3
Query: 431 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSG 490
LL L A D L+F + D ++D+L + GY + G +R A+ F
Sbjct: 421 LLKWLQAN--DHKVLLFSQMTHMLDIVQDYLGYRGYTYERLDGSVRGEERFLAVQNFNQN 248
Query: 491 KSP--ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVG 536
L++T +GL+++ VI D + + + R R+G
Sbjct: 247 DETFVFLLSTKAGGQGLNLTAADTVIFIDSDFNPQNDLQAAARAHRIG 104
>33543
Length = 471
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 525 YVHRIGRTGRVGNLGLATSF 544
Y+HR+GR GR G GLA +F
Sbjct: 6 YLHRVGRAGRFGTRGLAITF 65
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6755809|ref|NP_035732.1| talin 1 [Mus musculus]
(2541 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09133 397 e-119
30501 78 5e-14
08616 61 5e-09
17332 59 3e-08
17228 37 0.077
>09133
Length = 1844
Score = 397 bits (1019), Expect(2) = e-119, Method: Compositional matrix adjust.
Identities = 251/482 (52%), Positives = 312/482 (64%), Gaps = 18/482 (3%)
Frame = +1
Query: 2037 AAGSQEKLAQAAQSSVATITRLADVVKLGAASLGAEDPETQVVLINAVKDVAKALGDLIS 2096
AA +QE+LA AAQ++V TITRLADVVK+GA SLG E PE QV+LINAVKDVA AL DLIS
Sbjct: 103 AASNQEQLAAAAQAAVKTITRLADVVKIGAGSLGPEQPEAQVLLINAVKDVASALSDLIS 282
Query: 2097 ATKAAAGKVGDDPAVWQLKNSAKVMVTNVTSLLKTVKAVEDEATKGTRALEATTEHIRQE 2156
ATK A+GK DPA+ LK+SAKVMVTNVTSLLKTVK+VEDEA +GTRALE+T E I QE
Sbjct: 283 ATKNASGKPVSDPAMLHLKDSAKVMVTNVTSLLKTVKSVEDEAVRGTRALESTIEAIGQE 462
Query: 2157 LAVFC----------------SPEPPAKTSTPEDFIRMTKGITMATAKAVAAGNSCRQED 2200
+ SP P P R+ + +AT + V +S
Sbjct: 463 VKALTPRTTFLARQRQKI*SDSPSP*-----PWQLPRL---LPLAT-RVVRKISSL---- 603
Query: 2201 VIATANLSRRAIADMLRACKEAAFHPEVAPDVRLRALHYGRECANGYLELLDHVLLTLQK 2260
L R+ I ++ K A +++ RAL+ GR A Y ELL++V + +
Sbjct: 604 ---PPTLGRKCIFELFGVIK-GAAATAETAEIKKRALNAGRSAAMTYKELLENVHQVVLR 771
Query: 2261 PNPDLKQQLTGHSKRVAGSVTELIQAAEAMKGTEWVDPEDPTVIXXXXXXXXXXXXXXXX 2320
P + +Q L S++VA +VTEL+Q+AE +KGT+WVDP+DPTVI
Sbjct: 772 PTQEGRQNLALVSRKVANAVTELVQSAEVIKGTDWVDPDDPTVIAENELLSAASSIEAAA 951
Query: 2321 XXXXXXXPRAKPKEADESLNFEEQILEXXXXXXXXXXXXXXXXXXXQRELVAQGKVGA-I 2379
PR K+ADESLNF+EQILE QRELVAQGKV +
Sbjct: 952 KKLSQLKPRQAAKKADESLNFDEQILEAAKSIAAATAALVKSASAAQRELVAQGKVSSTF 1131
Query: 2380 PANALD-DGQWSQGLISAARMVAAATNNLCEAANAAVQGHASQEKLISSAKQVAASTAQL 2438
+A+D DGQWSQGLISAARMVAAAT++LCEAANA VQGHAS+EKLI+SAK+VA STAQL
Sbjct: 1132 TRHAVDEDGQWSQGLISAARMVAAATHSLCEAANAMVQGHASEEKLIASAKEVAGSTAQL 1311
Query: 2439 LVACKVKADQDSEAMKRLQAAGNAVKRASDNLVKAAQKAAAFEDQENETVVVKEKMVGGI 2498
L+ACKVKAD S AM+RLQAAGNAVKRAS+ LV+AAQ+ +++E E++ V ++MVGGI
Sbjct: 1312 LMACKVKADPGSVAMQRLQAAGNAVKRASEALVRAAQQERDVQEEE-ESLTVNKRMVGGI 1488
Query: 2499 AQ 2500
AQ
Sbjct: 1489 AQ 1494
Score = 52.8 bits (125), Expect(2) = e-119, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +2
Query: 2003 TLNREGAETFADHREGILKTAKVLVEDTKVLV 2034
TLN EG ETFAD RE ILKTAK LVEDTK LV
Sbjct: 2 TLNPEGDETFADQRENILKTAKALVEDTKTLV 97
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +1
Query: 1479 QSLGEPGCTQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTAN 1538
++ E G ++SAA +VA T +LC + A+A ++ + + SAKEVA STA
Sbjct: 1138 HAVDEDGQWSQGLISAARMVAAATHSLCEA---ANAMVQGHASEEKLIASAKEVAGSTAQ 1308
Query: 1539 LVKTIK 1544
L+ K
Sbjct: 1309 LLMACK 1326
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 1467 FARANQAIQMACQSLGEPGCTQAQVL--SAATIVAKHTSALCNSCRLASARTANPTAKRQ 1524
R +++ SLG P +AQVL +A VA S L ++ + AS + + A
Sbjct: 157 ITRLADVVKIGAGSLG-PEQPEAQVLLINAVKDVASALSDLISATKNASGKPVSDPAMLH 333
Query: 1525 FVQSAKEVANSTANLVKTIKALDGDFTEENRA 1556
SAK + + +L+KT+K+++ + RA
Sbjct: 334 LKDSAKVMVTNVTSLLKTVKSVEDEAVRGTRA 429
>30501
Length = 638
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Frame = -1
Query: 2330 AKPKEADESLNFE--EQILEXXXXXXXXXXXXXXXXXXXQRELVAQGKVGAIPANAL--D 2385
+K +E D + E E+ILE Q+E+V+ K G AN
Sbjct: 503 SKSRENDNKIKLEVNEKILEACTSLMECIKILILKSRALQKEIVSSQK-GNASANEFYKR 327
Query: 2386 DGQWSQGLISAARMVAAATNNLCEAANAAVQGHASQE-KLISSAKQVAASTAQLLVACKV 2444
+ QWS GLISA++ VA A N L EAAN AV + Q +LI +A+++AA T QL++A KV
Sbjct: 326 NSQWSDGLISASKSVAKAANYLVEAANNAVNSDSXQNFELIVAAQEIAACTVQLVIASKV 147
Query: 2445 KADQDSEAMKRLQAAGNAVKRAS 2467
KA+++SE + L AA V +A+
Sbjct: 146 KANRNSENLTNLTAASRNVTKAT 78
>08616
Length = 2833
Score = 61.2 bits (147), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Frame = +2
Query: 263 KDFL-PKEYVKQKGE---RKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEK 318
+DF+ P+ + K K + ++I +AH N +MS +EAK+ Y+K +SL +G+++F +
Sbjct: 992 EDFIAPRFFKKIKSKAIVQRIMEAHANVREMSLMEAKMAYIKAWQSLPEFGITYF----R 1159
Query: 319 MKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAAS--PKSFTLDFGDYQDG 376
+K N LLG+ V+R+D T + I+ W ++ W + +S LDF D Q
Sbjct: 1160 IKMANSKKEELLGVASNRVIRMDLNTGDSIKTWRYNLLQTWHVNWENESVILDFED-QKV 1336
Query: 377 YYSVQTTEGEQIAQLIAGYI 396
+S + + I GYI
Sbjct: 1337 TFSPLECSCKTAHEFIGGYI 1396
Score = 48.5 bits (114), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +2
Query: 173 WLDHGRTLREQGVEEHETLLLRRKFF-YSDQNVDSRDPVQLNLLYVQARDDILNGSHPVS 231
WLD R+L EQGV+E++ ++L+ KF+ + D N DP+++N +Y QA+ +++ +
Sbjct: 188 WLDSSRSLMEQGVQENDFIMLKFKFYNFYDLN-PKYDPIRINQIYEQAKWALISEEIDCT 364
Query: 232 FDKACEFAG--FQCQIQFG 248
++ FA FQ Q+Q G
Sbjct: 365 EEEMMVFAALQFQSQLQSG 421
>17332
Length = 473
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +2
Query: 149 KTLLRDEKKMEKLKQKLHTDD-----------ELNWLDHGRTLREQ--GVEEHETLLLRR 195
K +L EK E L LH D + +WLD ++L Q G + L
Sbjct: 41 KGILLQEKVCELLN--LHEKDYFGLRFIDASGQTHWLDGNKSLSSQLKGCQTPHKLYFGV 214
Query: 196 KFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKH 255
KF+ +D R+ + L ++Q + DIL G PV+FD+A E + Q + G + ++H
Sbjct: 215 KFYAADP-CKLREEITRYLFFLQVKQDILQGRLPVTFDEASELCAYAVQSELGDFDPRQH 391
Query: 256 KAGFLDLKDFLPKEYVKQKGERKIFQAHK 284
G++ F+P + ++ ER++ H+
Sbjct: 392 TDGYVSEFCFIPNQ--TEELERRVAGLHR 472
>17228
Length = 487
Score = 37.4 bits (85), Expect = 0.077, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +3
Query: 216 YVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKD-FLPKEYVK-- 272
+ Q + L G H V+ ++A + A +++F + H F D+ LP+ + +
Sbjct: 132 FPQEVPNFLRGYHKVTGEEAVKMAALLYRVRFS--QDATHFTKFSDIAPAILPRGFPETG 305
Query: 273 --QKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKM 319
++ + +KN S + R++++A S TYG FF VK++M
Sbjct: 306 LLDDVKKAVEAEYKNSTGSSPDSVRERFLQMAVSWPTYGCVFFEVKQRM 452
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|82802064|ref|XP_284175.5| PREDICTED: filamin C, gamma
isoform 1 [Mus musculus]
(2726 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13043 427 e-119
16231 251 6e-83
17351 258 3e-68
29446 204 5e-52
19277 180 4e-51
21436 147 5e-35
27230 75 1e-25
19002 101 4e-21
05081 88 6e-17
29755 64 1e-09
19147 63 2e-09
19154 62 4e-09
35059 57 1e-07
09100 53 2e-06
17613 53 2e-06
04951 50 2e-05
09711 49 3e-05
32088 40 0.015
18202 34 0.64
02928 34 0.70
31031 32 4.5
>13043
Length = 1574
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/534 (44%), Positives = 315/534 (58%), Gaps = 2/534 (0%)
Frame = +3
Query: 1391 PSEAKMSCKDNKDGSCTVEYIPFTPGDYDVNITFGGQPIPGSPFRXXXXXXXXXXXXXCS 1450
P EAKM C DN+DG+C VEY P PG YD+++ FG +PI SPF C
Sbjct: 36 PVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKVKCY 215
Query: 1451 GPGL-GTGVRARVPQTFTVDCSQAGRAPLQVAVLGP-TGVAEPVEVRDNGDGTHTVHYTP 1508
GPGL + V A +P FTVD AG APL V P +G + E+ +G + Y P
Sbjct: 216 GPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMP 395
Query: 1509 ATDGPYTVAVKYADQEVPRSPFKIKVLPSHDASKVRASGPGLNASGIPASLPVEFTIDAR 1568
+G V VKY + VP SPF ++VLP D SKV+ SGPG+ S +PASLP +FT+D R
Sbjct: 396 RAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRS-VPASLPAQFTVDTR 572
Query: 1569 DAGQGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFR 1628
DAG L + P+G K ++N DGTY V Y P+ G Y I +KY G ++P SPF
Sbjct: 573 DAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFN 752
Query: 1629 IHALPTGDASKCLVTVSIGGHGLGACLGPRIQIGEETVITVDAKAAGKGKVTCTVSTPDG 1688
+ A P GDAS+C +T G + I I +ETVITVDA AGKG VTC + +P G
Sbjct: 753 VEATPLGDASQCRIT--DGAERV-------IPIEKETVITVDAADAGKGSVTCRIRSPSG 905
Query: 1689 AELDVDVVENHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVLACDPLPHVEEPAEM 1748
+++D+D+V+ DGTF I + G+Y+I I+FGG +P+ + A +P +E +
Sbjct: 906 SDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEA---VPE-DEYEKY 1073
Query: 1749 LQMRQPYAPLRPGTCPTHWATXXXXXXXXXLESMLRPFNLVIPFTVQKGELTGEVRMPSG 1808
LQ R A + +P + P ++ V MPSG
Sbjct: 1074 LQSRV--------VDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSG 1229
Query: 1809 KTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRHVSAYGP 1868
KT+ P I DN+DGT+TVRY PTE GLH++ +KY+ I GSP F+VD++NS +V+AYGP
Sbjct: 1230 KTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVDSVNSGYVTAYGP 1409
Query: 1869 GLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSYLPT 1922
GLSHG+V +PA FTI TK+AG GGL+LAVEGPSK EI C DN+DGTC VSYLP+
Sbjct: 1410 GLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLPS 1571
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 269/541 (49%), Gaps = 18/541 (3%)
Frame = +3
Query: 603 GTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPA 662
G LG IEGP +AK++CDD DG+C V Y+PT+PG+Y + V+ D+ I+DSPF IQ
Sbjct: 9 GGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQ-N 185
Query: 663 PPDCFPDKVKAFGPGLEPTGCIVDRPAEFTIDARAAGKGDLKLYAQD-ADGCPIDIKVIP 721
P D KVK +GPGL+ + + PA FT+DAR AG+ L + D G + +++P
Sbjct: 186 PVDA--SKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVP 359
Query: 722 NGDGTFRCSYVPTKPIKHTIIVSWGGVNVPKSPFRVNVGEGSHPERVKVYGPGVEKTGLK 781
+G ++ +Y+P K + V +GG VP SPF + V G P +VKV GPGV ++ +
Sbjct: 360 VEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRS-VP 536
Query: 782 ANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPVEAXXXXXXXXXXXXTFTVKYTPPGAGH 841
A+ P FTVD +AG D ++C V P + T+ V YTP G
Sbjct: 537 ASLPAQFTVDTRDAGVAD----LECM--VQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGV 698
Query: 842 YTIMVLFANQEIPASPFHIKVDPSHDASKVKAEGPGLSRTGVEVGKPTHFTVLTKGAGKA 901
Y I+V + Q++P SPF+++ P DAS+ + G R + + K T TV AGK
Sbjct: 699 YDIIVKYDGQDVPRSPFNVEATPLGDASQCRITD-GAERV-IPIEKETVITVDAADAGKG 872
Query: 902 KLDVHFAGAAKGEAVRDFEIIDNHDYSYTVKYTAVQQGNMAVTVTYGGDPVPKSPFVVNV 961
+ + + D +I+D D ++T+ + G + + +GG+ VP +
Sbjct: 873 SVTCRIRSPSGSDI--DIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEA 1046
Query: 962 APPLDLSKVKVQGLNSKVA---VGQEQAFSVNTRGAGGQGQ--------------LDVRM 1004
P + K L S+V + +Q VN G Q + +
Sbjct: 1047 VPEDEYEKY----LQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASV 1214
Query: 1005 TSPSRRPIPCKLEPGGGAEAQAVRYMPPEEGPYKVDITYDGHPVPGSPFAVEGVLPPDPS 1064
PS + K+E VRY P E G +++ + Y+ + GSPF V +
Sbjct: 1215 IMPSGKTSYPKIEDNRDGTV-TVRYQPTETGLHELHVKYNNECIQGSPFFFH-VDSVNSG 1388
Query: 1065 KVCAYGPGLKGGLVGTPAPFSIDTKXXXXXXXXXXVEGPCEAKIECQDNGDGSCAVSYLP 1124
V AYGPGL G+V PA F+I+TK VEGP + +I+C DN DG+C VSYLP
Sbjct: 1389 YVTAYGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLP 1568
Query: 1125 T 1125
+
Sbjct: 1569 S 1571
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 250/537 (46%), Gaps = 29/537 (5%)
Frame = +3
Query: 1100 VEGPCEAKIECQDNGDGSCAVSYLPTEPGEYTINILFAEAHIPGSPFKATIQPVFDPSKV 1159
+EGP EAK++C DN DG+C V Y PT+PG+Y I++LF + I SPF IQ D SKV
Sbjct: 27 IEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKV 206
Query: 1160 RASGPGLERGK--AGEAATFTVDCSEAGEAELTIEILSD-AGVKAEVLIQNNADGTYHIT 1216
+ GPGL+ + A A FTVD +AGEA L + +G + E I +G Y T
Sbjct: 207 KCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQAT 386
Query: 1217 YSPAFPGTYTITIKYGGHPIPKFPTRVHVQPAVDTSGIKVSGPGVEPHGVLREVTTEFTV 1276
Y P G + +KYGG P+P P + V P VD S +KVSGPGV V + +FTV
Sbjct: 387 YMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVR-RSVPASLPAQFTV 563
Query: 1277 DARSLTATGGNHVTARVLNPSGAKTDTYVTDNGDGTYRVQYTAYEEGVHLVEVLYDEVAV 1336
D R G + V P G+ Y +N DGTY V YT + GV+ + V YD V
Sbjct: 564 DTRD---AGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDV 734
Query: 1337 PKSPFRVGVTEGCDPTRVRAFGPGLEGGLVNKANRFTVXXXXXXXXXXXXXXXXP--SEA 1394
P+SPF V T D ++ R + K TV P S+
Sbjct: 735 PRSPFNVEATPLGDASQCRITDGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDI 914
Query: 1395 KMSCKDNKDGSCTVEYIPFTPGDYDVNITFGGQPIPGSPFRXXXXXXXXXXXXXCSGPGL 1454
+ D DG+ T+ +IP G+Y + I FGG +P +
Sbjct: 915 DIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKY------- 1073
Query: 1455 GTGVRARVPQTFTV--DCSQAGRAP--------------------LQVAVLGPTGVAEPV 1492
+++RV V Q AP + +V+ P+G
Sbjct: 1074 ---LQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSGKTSYP 1244
Query: 1493 EVRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVLPSHDASKVRASGPGLNA 1552
++ DN DGT TV Y P G + + VKY ++ + SPF V S ++ V A GPGL+
Sbjct: 1245 KIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHV-DSVNSGYVTAYGPGLSH 1421
Query: 1553 SGIPASLPVEFTIDARDAGQGLLTVQILDPEGKPKKANIR--DNGDGTYTVSYLPDM 1607
+ P FTI+ ++AG G L + + EG P K I+ DN DGT VSYLP +
Sbjct: 1422 GVV--YEPAVFTINTKEAGAGGLALAV---EG-PSKTEIKCVDNQDGTCNVSYLPSV 1574
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 167/515 (32%), Positives = 244/515 (47%), Gaps = 25/515 (4%)
Frame = +3
Query: 923 DNHDYSYTVKYTAVQQGNMAVTVTYGGDPVPKSPFVVNVAPPLDLSKVKVQGLN---SKV 979
DN D + V+Y + G ++V +G P+ SPF V + P+D SKVK G S+V
Sbjct: 63 DNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKVKCYGPGLDASEV 242
Query: 980 AVGQEQAFSVNTRGAGGQGQLDVRMTSP-SRRPIPCKLEPGGGAEAQAVRYMPPEEGPYK 1038
A F+V+ R AG + LDV T P S ++ P QA YMP EG K
Sbjct: 243 AANLPAVFTVDARDAG-EAPLDVTFTDPLSGAQQEAEIVPVEEGLYQAT-YMPRAEGKCK 416
Query: 1039 VDITYDGHPVPGSPFAVEGVLPPDPSKVCAYGPGLKGGL-VGTPAPFSIDTKXXXXXXXX 1097
VD+ Y G PVP SPF ++ + DPSKV GPG++ + PA F++DT+
Sbjct: 417 VDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRSVPASLPAQFTVDTRDAGVADLE 596
Query: 1098 XXVEGPCEAKIE--CQDNGDGSCAVSYLPTEPGEYTINILFAEAHIPGSPFKATIQPVFD 1155
V+ P + I+ Q+N DG+ V Y P + G Y I + + +P SPF P+ D
Sbjct: 597 CMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFNVEATPLGD 776
Query: 1156 PSKVRASGPGLERGKAGEAAT-FTVDCSEAGEAELTIEILSDAGVKAEVLIQNNADGTYH 1214
S+ R + G ER E T TVD ++AG+ +T I S +G ++ I + DGT+
Sbjct: 777 ASQCRITD-GAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQGDGTFT 953
Query: 1215 ITYSPAFPGTYTITIKYGGHPIPKFPTRVHVQP-----------------AVDTSGIKVS 1257
I++ P + G Y I IK+GG+ +P P D +
Sbjct: 954 ISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYLQSRVVDDLIVADQVDQVNA 1133
Query: 1258 GPGVEPHGVLREVTTEFTVDARSLTATGGNHVTARVLNPSGAKTDTYVTDNGDGTYRVQY 1317
PG G+ + V +F V N V+A V+ PSG + + DN DGT V+Y
Sbjct: 1134 APG---SGLYQPVDFQFPVGPIF------NFVSASVIMPSGKTSYPKIEDNRDGTVTVRY 1286
Query: 1318 TAYEEGVHLVEVLYDEVAVPKSPFRVGVTEGCDPTRVRAFGPGLEGGLVNKANRFTVXXX 1377
E G+H + V Y+ + SPF V + + V A+GPGL G+V + FT+
Sbjct: 1287 QPTETGLHELHVKYNNECIQGSPFFFHV-DSVNSGYVTAYGPGLSHGVVYEPAVFTINTK 1463
Query: 1378 XXXXXXXXXXXXXPSEAKMSCKDNKDGSCTVEYIP 1412
PS+ ++ C DN+DG+C V Y+P
Sbjct: 1464 EAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLP 1568
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 241/542 (44%), Gaps = 25/542 (4%)
Frame = +3
Query: 1588 KANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPTGDASKCLVTVSIG 1647
K DN DGT V Y P G+Y I++ +G I SPF + DASK V
Sbjct: 48 KMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASK----VKCY 215
Query: 1648 GHGLGACLGPRIQIGEETVITVDAKAAGKGKVTCTVSTP-DGAELDVDVVENHDGTFDIY 1706
G GL A + V TVDA+ AG+ + T + P GA+ + ++V +G +
Sbjct: 216 GPGLDAS---EVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQAT 386
Query: 1707 YTAPEPGKYVITIRFGGEHIPNSPFHVLACDPLPHVEEPAEMLQMRQPYAPLRPGTCPTH 1766
Y GK + +++GG+ +PNSPFH+ LP V+ P+++ P + P
Sbjct: 387 YMPRAEGKCKVDVKYGGKPVPNSPFHMQV---LPGVD-PSKVKVSGPGVRRSVPASLPAQ 554
Query: 1767 WATXXXXXXXXXLESMLRPFNLVIPFTVQKGELTGEVRMPSGKTARPNITDNKDGTITVR 1826
+ LE M V+ P G +P +N+DGT V
Sbjct: 555 FTVDTRDAGVADLECM--------------------VQRPDGSFIKPYFQNNEDGTYDVI 674
Query: 1827 YAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRHVSAYGPGLSHGM-VNKPATFTIVT 1885
Y P + G++ + +KYDG +P SP + G + + K T+
Sbjct: 675 YTPEDLGVYDIIVKYDGQDVPRSPFNVEATPLGDASQCRITDGAERVIPIEKETVITVDA 854
Query: 1886 KDAGEGGLSLAVEGPSKAEITCK--DNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPF 1943
DAG+G ++ + PS ++I D DGT T+S++P G+Y I ++F +P +
Sbjct: 855 ADAGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQY 1034
Query: 1944 TAKITGDDSM----------------RTSQLNV----GTSTDVSLKITEGDLSQL-TASI 1982
TA+ +D + Q+N G V + G + +AS+
Sbjct: 1035 TAEAVPEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASV 1214
Query: 1983 RAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHVVSVRKSGKHVTNSPFKILVGPSEIGDA 2042
PSG ++ + + + + P E G H + V+ + + + SPF V G
Sbjct: 1215 IMPSGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVDSVNSG-- 1388
Query: 2043 SKVRVWGKGLSEGQTFQVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDMEDGTCKVTYC 2102
V +G GLS G ++ A F ++T+ AG GGL L++EGPSK +I C D +DGTC V+Y
Sbjct: 1389 -YVTAYGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYL 1565
Query: 2103 PT 2104
P+
Sbjct: 1566 PS 1571
Score = 191 bits (484), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 208/450 (46%), Gaps = 25/450 (5%)
Frame = +3
Query: 1307 DNGDGTYRVQYTAYEEGVHLVEVLYDEVAVPKSPFRVGVTEGCDPTRVRAFGPGLEGGLV 1366
DN DGT RV+Y + G + + VL+ + + SPF V + D ++V+ +GPGL+ V
Sbjct: 63 DNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKVKCYGPGLDASEV 242
Query: 1367 --NKANRFTVXXXXXXXXXXXXXXXXP---SEAKMSCKDNKDGSCTVEYIPFTPGDYDVN 1421
N FTV P ++ + ++G Y+P G V+
Sbjct: 243 AANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAEGKCKVD 422
Query: 1422 ITFGGQPIPGSPFRXXXXXXXXXXXXXCSGPGLGTGVRARVPQTFTVDCSQAGRAPLQVA 1481
+ +GG+P+P SPF SGPG+ V A +P FTVD AG A L+
Sbjct: 423 VKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRSVPASLPAQFTVDTRDAGVADLECM 602
Query: 1482 VLGPTGVAEPVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVLPSHDAS 1541
V P G ++N DGT+ V YTP G Y + VKY Q+VPRSPF ++ P DAS
Sbjct: 603 VQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFNVEATPLGDAS 782
Query: 1542 KVRASGPGLNASGIPASLPVE----FTIDARDAGQGLLTVQILDPEGKPKKANIRDNGDG 1597
+ R + G +P+E T+DA DAG+G +T +I P G +I D GDG
Sbjct: 783 QCRIT------DGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQGDG 944
Query: 1598 TYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPTGDASKCLVTVSIGGHGLGACLGP 1657
T+T+S++P +G Y I IK+GG+ +P + A+P + K L + +
Sbjct: 945 TFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYLQSRVVDD--------- 1097
Query: 1658 RIQIGEETVITVDAKAAGKGK----------------VTCTVSTPDGAELDVDVVENHDG 1701
I + V V+A A G G V+ +V P G + +N DG
Sbjct: 1098 --LIVADQVDQVNA-APGSGLYQPVDFQFPVGPIFNFVSASVIMPSGKTSYPKIEDNRDG 1268
Query: 1702 TFDIYYTAPEPGKYVITIRFGGEHIPNSPF 1731
T + Y E G + + +++ E I SPF
Sbjct: 1269 TVTVRYQPTETGLHELHVKYNNECIQGSPF 1358
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 233/532 (43%), Gaps = 36/532 (6%)
Frame = +3
Query: 2071 GYGGLGLSIEGPSKVDINCEDMEDGTCKVTYCPTEPGTYIINIKFADKHVPGSPFTVKVT 2130
G GGLGL IEGP + + C+D DGTC+V Y PT+PG Y I++ F DK + SPF+VK+
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQ 182
Query: 2131 G---------EGRMKESITRRRQAPSIATIGST------CDLNLKIPGNWFQMVSAQERL 2175
G ++ P++ T+ + D+ P + Q + +
Sbjct: 183 NPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPV 362
Query: 2176 TRTFTRSSHTYTRTERTEISKTRGGETKREVRVEESTQVGGDPFPA-VFGDFLGRERLGS 2234
++++ + ++ GG+ G DP V G + R S
Sbjct: 363 EEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRSVPAS 542
Query: 2235 FGSITRQQEGEASSQDMTAQVTSPSGKTEAAEIVEGEDSAYSVRFVPQEMGPHTVTVKYR 2294
+ +A D+ V P G ED Y V + P+++G + + VKY
Sbjct: 543 LPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYD 722
Query: 2295 GQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLERGVAGVPAE----FSIWTREAGAGGLSI 2350
GQ VP SPF PLG+ ++ G + +P E ++ +AG G ++
Sbjct: 723 GQDVPRSPFNVEATPLGDASQCRITDGAERV------IPIEKETVITVDAADAGKGSVTC 884
Query: 2351 AVEGPSKAEIAFE--DRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASLSDD 2408
+ PS ++I + D+ DG+ +S++ Q G+Y + IKF +PD + +
Sbjct: 885 RIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEY 1064
Query: 2409 ARRLTVTSLQET-------------GLKVNQPASFAVQLNGARGVIDARVHTPSGAVEEC 2455
+ L + + G + QP F + + A V PSG
Sbjct: 1065 EKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSGKTSYP 1244
Query: 2456 YVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQAGDPGLVSAYGPG 2515
+ + T+R+ P E G+H + VK+N I GSPF V + + G V+AYGPG
Sbjct: 1245 KIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHV----DSVNSGYVTAYGPG 1412
Query: 2516 LEGGTTGVSSEFIVNTQNAGSGALSVTIDGPSKVQLDCRECPEGHV-VTYTP 2566
L G + F +NT+ AG+G L++ ++GPSK ++ C + +G V+Y P
Sbjct: 1413 LSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLP 1568
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 222/490 (45%), Gaps = 22/490 (4%)
Frame = +3
Query: 267 APVRSKQLNP---KKAIAYGPGIEPQGNTVLQPAHFTVQTVDAGVGEVLVYIEDP-EGHT 322
+P K NP K YGPG++ PA FTV DAG + V DP G
Sbjct: 159 SPFSVKIQNPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQ 338
Query: 323 EEAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAGQNIERSPFEVNVGMALGDANKVSAR 382
+EA++VP ++ Y +Y+P+ G KV V + G+ + SPF + V + D +KV
Sbjct: 339 QEAEIVPV--EEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGV-DPSKVKVS 509
Query: 383 GPGLEPVGNVANKPTYFDIYTAGAGTGDVAVVIVDPQGRRDTVEVALEDKGDNTFRCTYR 442
GPG+ A+ P F + T AG D+ ++ P G ++ ++ D T+ Y
Sbjct: 510 GPGVR-RSVPASLPAQFTVDTRDAGVADLECMVQRPDGS--FIKPYFQNNEDGTYDVIYT 680
Query: 443 PVMEGPHTVHVAFAGAPITRSPFPVHVAEACNPNACRASGRGLQPKGVRVKEVADFKVFT 502
P G + + V + G + RSPF V + + CR + + + +++ V
Sbjct: 681 PEDLGVYDIIVKYDGQDVPRSPFNVEATPLGDASQCRITDGA--ERVIPIEKETVITVDA 854
Query: 503 KGAGSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYAIPRSPF 562
AG G + ++ P G++ + + + GDG F + P G+Y++ I +GG +P +
Sbjct: 855 ADAGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQY 1034
Query: 563 EVQVSPEAGAQKV---RAWGPGLETGQVG-----------KSADFVVEAIGTEVGTLGFS 608
+ PE +K R + QV + DF +G + S
Sbjct: 1035TAEAVPEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQF-PVGPIFNFVSAS 1211
Query: 609 IEGP----SQAKIECDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPP 664
+ P S KIE D DG+ VRY PTE G + +HV ++E I+ SPF H+
Sbjct: 1212VIMPSGKTSYPKIE--DNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVD---- 1373
Query: 665 DCFPDKVKAFGPGLEPTGCIVDRPAEFTIDARAAGKGDLKLYAQDADGCPIDIKVIPNGD 724
V A+GPGL + +V PA FTI+ + AG G L L + +IK + N D
Sbjct: 1374SVNSGYVTAYGPGL--SHGVVYEPAVFTINTKEAGAGGLALAVEGP--SKTEIKCVDNQD 1541
Query: 725 GTFRCSYVPT 734
GT SY+P+
Sbjct: 1542GTCNVSYLPS 1571
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 225/510 (44%), Gaps = 28/510 (5%)
Frame = +3
Query: 324 EAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAGQNIERSPFEVNVGMALGDANKVSARG 383
EAK+ ++++D T V Y P G + ++VLF + I+ SPF V + + DA+KV G
Sbjct: 42 EAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPV-DASKVKCYG 218
Query: 384 PGLEPVGNVANKPTYFDIYTAGAGTGDVAVVIVDP-QGRRDTVEVALEDKGDNTFRCTYR 442
PGL+ AN P F + AG + V DP G + E+ ++G ++ TY
Sbjct: 219 PGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEG--LYQATYM 392
Query: 443 PVMEGPHTVHVAFAGAPITRSPFPVHVAEACNPNACRASGRGLQPKGVRVKEVADFKVFT 502
P EG V V + G P+ SPF + V +P+ + SG G++ + V A F V T
Sbjct: 393 PRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVR-RSVPASLPAQFTVDT 569
Query: 503 KGAGSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYAIPRSPF 562
+ AG +L+ V+ P G+ + DG ++ Y P G Y + + + G +PRSPF
Sbjct: 570 RDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPF 749
Query: 563 EVQVSPEAGAQKVRAWGPGLETGQVGKSADFVVEAIGTEVGTLGFSIEGPSQAKIECD-- 620
V+ +P A + R + K V+A G++ I PS + I+ D
Sbjct: 750 NVEATPLGDASQCRITDGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIV 929
Query: 621 DKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKVKAFGPGLEP 680
D+GDG+ + + P GEY + + + D + A + P D + ++
Sbjct: 930 DQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTA--EAVPEDEYEKYLQ-------- 1079
Query: 681 TGCIVDRPAEFTIDARAAGKGDLKLYAQDADGCPIDIK--------------VIPNG--- 723
+ + D +D A G LY P+D + ++P+G
Sbjct: 1080SRVVDDLIVADQVDQVNAAPGS-GLYQ------PVDFQFPVGPIFNFVSASVIMPSGKTS 1238
Query: 724 --------DGTFRCSYVPTKPIKHTIIVSWGGVNVPKSPFRVNVGEGSHPERVKVYGPGV 775
DGT Y PT+ H + V + + SPF +V + + V YGPG+
Sbjct: 1239YPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHV-DSVNSGYVTAYGPGL 1415
Query: 776 EKTGLKANEPTYFTVDCSEAGQGDVSIGIK 805
+ EP FT++ EAG G +++ ++
Sbjct: 1416SHGVVY--EPAVFTINTKEAGAGGLALAVE 1499
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 154/546 (28%), Positives = 230/546 (42%), Gaps = 20/546 (3%)
Frame = +3
Query: 506 GSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYAIPRSPFEVQ 565
G G L + ++GP E +K + DG EYYP PGKY +++ +G I SPF V+
Sbjct: 3 GKGGLGLGIEGP--VEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVK 176
Query: 566 VSPEAGAQKVRAWGPGLETGQVGKS--ADFVVEAIGTEVGTLGFSIEGP---SQAKIECD 620
+ A KV+ +GPGL+ +V + A F V+A L + P +Q + E
Sbjct: 177 IQNPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIV 356
Query: 621 DKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKVKAFGPGLEP 680
+G Y P G+ V V + + +SPF H+Q P P KVK GPG+
Sbjct: 357 PVEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPF--HMQ-VLPGVDPSKVKVSGPGVRR 527
Query: 681 TGCIVDRPAEFTIDARAAGKGDLKLYAQDADGCPIDIKVIPNGDGTFRCSYVPTKPIKHT 740
+ PA+FT+D R AG DL+ Q DG I N DGT+ Y P +
Sbjct: 528 S-VPASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYD 704
Query: 741 IIVSWGGVNVPKSPFRVNVGEGSHPERVKVYGPGVEKTGLKANEPTYFTVDCSEAGQGDV 800
IIV + G +VP+SPF V + ++ G E+ + + T TVD ++AG+G V
Sbjct: 705 IIVKYDGQDVPRSPFNVEATPLGDASQCRITD-GAERV-IPIEKETVITVDAADAGKGSV 878
Query: 801 SIGIKCAPGVVGPVEAXXXXXXXXXXXXTFTVKYTPPGAGHYTIMVLFANQEIPASPFHI 860
+ I+ G + TFT+ + P AG Y I + F +P +
Sbjct: 879 TCRIRSPSG------SDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTA 1040
Query: 861 KVDPSHDASKVKAEGPGLSRT--GVEVGKPTHFTVLTKGAGKAK-LDVHFAGAAKGEAVR 917
+ P + K SR + V G+G + +D F V
Sbjct: 1041 EAVPEDEYEKYLQ-----SRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVS 1205
Query: 918 DFEII-----------DNHDYSYTVKYTAVQQGNMAVTVTYGGDPVPKSPFVVNVAPPLD 966
I+ DN D + TV+Y + G + V Y + + SPF +V ++
Sbjct: 1206 ASVIMPSGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVD-SVN 1382
Query: 967 LSKVKVQGLNSKVAVGQEQA-FSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGGGAEAQ 1025
V G V E A F++NT+ AG G L + + PS+ I C G
Sbjct: 1383 SGYVTAYGPGLSHGVVYEPAVFTINTKEAGA-GGLALAVEGPSKTEIKCVDNQDGTCN-- 1553
Query: 1026 AVRYMP 1031
V Y+P
Sbjct: 1554 -VSYLP 1568
Score = 127 bits (318), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 130/256 (50%), Gaps = 14/256 (5%)
Frame = +3
Query: 1889 GEGGLSLAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKIT 1948
G+GGL L +EGP +A++ C DN+DGTC V Y PT PG Y I V F DK I SPF+ KI
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQ 182
Query: 1949 G--DDS--------MRTSQLNVGTSTDVSLKITEGDLSQLTASIRAP-SGNEEPCLLKRL 1997
D S + S++ ++ + + L + P SG ++ + +
Sbjct: 183 NPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPV 362
Query: 1998 PNRHIGISFTPKEVGEHVVSVRKSGKHVTNSPFKILVGPSEIGDASKVRVWGKGLSEGQT 2057
++ P+ G+ V V+ GK V NSPF + V P D SKV+V G G+
Sbjct: 363 EEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGV--DPSKVKVSGPGVRRSVP 536
Query: 2058 FQV-AEFIVDTRNAGYGGLGLSIEGP--SKVDINCEDMEDGTCKVTYCPTEPGTYIINIK 2114
+ A+F VDTR+AG L ++ P S + ++ EDGT V Y P + G Y I +K
Sbjct: 537 ASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVK 716
Query: 2115 FADKHVPGSPFTVKVT 2130
+ + VP SPF V+ T
Sbjct: 717 YDGQDVPRSPFNVEAT 764
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 157/353 (44%), Gaps = 21/353 (5%)
Frame = +3
Query: 1811 ARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYV-DAINSRHVSAYGPG 1869
A+ DN+DGT V Y PT+ G + + + + I SP + + +++ V YGPG
Sbjct: 45 AKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKVKCYGPG 224
Query: 1870 LSHGMV--NKPATFTIVTKDAGEGGLSLAVEGP---SKAEITCKDNKDGTCTVSYLPTAP 1924
L V N PA FT+ +DAGE L + P ++ E ++G +Y+P A
Sbjct: 225 LDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAE 404
Query: 1925 GDYSIIVRFDDKHIPGSPFTAKIT-GDDSMRTSQLNVGTSTDVSLKITEGDLSQLTASIR 1983
G + V++ K +P SPF ++ G D + G V + +Q T R
Sbjct: 405 GKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRSVPASLP----AQFTVDTR 572
Query: 1984 APSGNEEPCLLKR---------LPNRHIG---ISFTPKEVGEHVVSVRKSGKHVTNSPFK 2031
+ C+++R N G + +TP+++G + + V+ G+ V SPF
Sbjct: 573 DAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFN 752
Query: 2032 ILVGPSEIGDASKVRVWGKGLSEGQTFQVAEFIVDTRNAGYGGLGLSIEGPS--KVDINC 2089
+ P +GDAS+ R+ + VD +AG G + I PS +DI+
Sbjct: 753 VEATP--LGDASQCRITDGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDI 926
Query: 2090 EDMEDGTCKVTYCPTEPGTYIINIKFADKHVPGSPFTVKVTGEGRMKESITRR 2142
D DGT +++ P G YII IKF VP +T + E ++ + R
Sbjct: 927 VDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYLQSR 1085
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 172/381 (45%), Gaps = 7/381 (1%)
Frame = +3
Query: 2344 GAGGLSIAVEGPSKAEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVA 2403
G GGL + +EGP +A++ +D +DG+C V Y +PG Y++S+ F D+ I DSPF V +
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQ 182
Query: 2404 SLSDDAR-RLTVTSLQETGLKVNQPASFAVQLNGA-RGVIDARVHTP-SGAVEECYVSEL 2460
+ D ++ + L + + N PA F V A +D P SGA +E + +
Sbjct: 183 NPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPV 362
Query: 2461 DSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQAGDPGLVSAYGPGLEGGT 2520
+ + ++P G +DVK+ G +P SPF ++V DP V GPG+
Sbjct: 363 EEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQV---LPGVDPSKVKVSGPGVRRSV 533
Query: 2521 -TGVSSEFIVNTQNAGSGALSVTIDGP--SKVQLDCRECPEG-HVVTYTPMAPGNYLIAI 2576
+ ++F V+T++AG L + P S ++ + +G + V YTP G Y I +
Sbjct: 534 PASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIV 713
Query: 2577 KYGGPQHIVGSPFKAKVTGPRLSGGHSLHETSTVLVETVTKXXXXXXXXXXXIPKFSSDA 2636
KY G Q + SPF + T L + S + + A
Sbjct: 714 KYDG-QDVPRSPFNVEAT--------PLGDASQC--------------------RITDGA 806
Query: 2637 SKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVT 2696
+V+ + ++ TVD + AG + + P ++ + G+ + ++
Sbjct: 807 ERVIP---------IEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTIS 959
Query: 2697 YTVKEKGDYILIVKWGDESVP 2717
+ + G+YI+ +K+G VP
Sbjct: 960 FIPQYAGEYIIEIKFGGNFVP 1022
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 109/264 (41%), Gaps = 7/264 (2%)
Frame = +3
Query: 2467 IRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQAGDPGLVSAYGPGLEGGTTGVS-- 2524
+ + P + G + I V F I SPF +++ D V YGPGL+ +
Sbjct: 87 VEYYPTKPGKYDISVLFGDKPIKDSPFSVKI---QNPVDASKVKCYGPGLDASEVAANLP 257
Query: 2525 SEFIVNTQNAGSGALSVTIDGP-SKVQLDCRECP--EG-HVVTYTPMAPGNYLIAIKYGG 2580
+ F V+ ++AG L VT P S Q + P EG + TY P A G + +KYGG
Sbjct: 258 AVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAEGKCKVDVKYGG 437
Query: 2581 PQHIVGSPFKAKVTGPRLSGGHSLHETSTVLVETVTKXXXXXXXXXXXIPKFSSDASKVV 2640
+ + SPF +V L G D SKV
Sbjct: 438 -KPVPNSPFHMQV----LPG---------------------------------VDPSKVK 503
Query: 2641 TRGPGLSQAF-VGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTV 2699
GPG+ ++ FTVD AG + V P + Y ++ + Y+V YT
Sbjct: 504 VSGPGVRRSVPASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTP 683
Query: 2700 KEKGDYILIVKWGDESVPGSPFKV 2723
++ G Y +IVK+ + VP SPF V
Sbjct: 684 EDLGVYDIIVKYDGQDVPRSPFNV 755
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 115/262 (43%), Gaps = 18/262 (6%)
Frame = +3
Query: 299 FTVQTVDAGVGEVLVYIEDPEGHTEEAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAG- 357
TV DAG G V I P G + +V + D T+ +S++P+ AG + + + F G
Sbjct: 840 ITVDAADAGKGSVTCRIRSPSGSDIDIDIV--DQGDGTFTISFIPQYAGEYIIEIKFGGN 1013
Query: 358 ---------QNIERSPFEVNVGMALGD----ANKV----SARGPGLEPVGNVANKPTYFD 400
+ + +E + + D A++V +A G GL +P F
Sbjct: 1014 FVPDGQYTAEAVPEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGL-------YQPVDFQ 1172
Query: 401 IYTAGAGTGDVAVVIVDPQGRRDTVEVALEDKGDNTFRCTYRPVMEGPHTVHVAFAGAPI 460
+ G V+ ++ P G+ T +ED D T Y+P G H +HV + I
Sbjct: 1173 -FPVGPIFNFVSASVIMPSGK--TSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECI 1343
Query: 461 TRSPFPVHVAEACNPNACRASGRGLQPKGVRVKEVADFKVFTKGAGSGELKVTVKGPKGT 520
SPF HV ++ N A G GL GV V E A F + TK AG+G L + V+GP T
Sbjct: 1344 QGSPFFFHV-DSVNSGYVTAYGPGLS-HGV-VYEPAVFTINTKEAGAGGLALAVEGPSKT 1514
Query: 521 EEPVKVREAGDGVFECEYYPVV 542
E +K + DG Y P V
Sbjct: 1515 E--IKCVDNQDGTCNVSYLPSV 1574
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 79/195 (40%), Gaps = 4/195 (2%)
Frame = +3
Query: 2535 GSGALSVTIDGPSKVQLDCRECPEGHV-VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKV 2593
G G L + I+GP + ++ C + +G V Y P PG Y I++ +G + I SPF K+
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGD-KPIKDSPFSVKI 179
Query: 2594 TGPRLSGGHSLHETSTVLVETVTKXXXXXXXXXXXIPKFSSDASKVVTRGPGLSQAFVGQ 2653
P DASKV GPGL + V
Sbjct: 180 QNP-------------------------------------VDASKVKCYGPGLDASEVAA 248
Query: 2654 K--NSFTVDCSKAGTNMMMVGVHGPKTPCE-EVYVKHMGNRVYNVTYTVKEKGDYILIVK 2710
FTVD AG + V P + + E + + +Y TY + +G + VK
Sbjct: 249 NLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAEGKCKVDVK 428
Query: 2711 WGDESVPGSPFKVNV 2725
+G + VP SPF + V
Sbjct: 429 YGGKPVPNSPFHMQV 473
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Frame = +3
Query: 274 LNPKKAIAYGPGIEPQGNTVLQPAHFTVQTVDAGVGEVLVYIEDPEGHTEEAKVVPNNDK 333
+N AYGPG+ V +PA FT+ T +AG G + + +E P E K V N +
Sbjct: 1377 VNSGYVTAYGPGL--SHGVVYEPAVFTINTKEAGAGGLALAVEGP--SKTEIKCVDN--Q 1538
Query: 334 DRTYAVSYVPKV 345
D T VSY+P V
Sbjct: 1539 DGTCNVSYLPSV 1574
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 2633 SSDASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGP 2676
S ++ V GPGLS V + FT++ +AG + + V GP
Sbjct: 1374 SVNSGYVTAYGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGP 1505
>16231
Length = 1393
Score = 251 bits (641), Expect(2) = 6e-83, Method: Compositional matrix adjust.
Identities = 140/288 (48%), Positives = 190/288 (65%), Gaps = 5/288 (1%)
Frame = +3
Query: 309 GEVLVYIEDPEGHTEEAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAGQNIERSPFEVN 368
G+V V I +P+G E +V NND++ TY+ +YVP + G +KV +LFA + I +SPF V
Sbjct: 180 GDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVT 359
Query: 369 VGMALGDANKVSARGPGLEPVGNVANKPTYFDIYTAGAGTGDVAVVIVDPQGRRDTVEVA 428
V A GDA+KV+A GPGLE G VA K T+F+++ GAG G V VVI+DP GR+D V
Sbjct: 360 VEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPK 539
Query: 429 LE---DKGDNTFRCTYRPVMEGPHTVHVAFAGAPITRSPFPVHVAEACNPNACRASGRGL 485
++ DK D T+ Y + +G H+V+V FAG+ I SPF V VA A N AC A+GRG+
Sbjct: 540 VQSAPDK-DATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGV 716
Query: 486 QPKGVRVKEVADFKVFTKGAGSGELKVTVKGPKGTEEPVKVREAGDG--VFECEYYPVVP 543
QP+GVRVK+ ADF V TKGAG GE+ V + GP G EE ++++ D V+EC Y P P
Sbjct: 717 QPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKP 896
Query: 544 GKYVVTITWGGYAIPRSPFEVQVSPEAGAQKVRAWGPGLETGQVGKSA 591
G Y++ IT+G I +SPF+++V P K+RA+GPGLE G V + A
Sbjct: 897 GNYIINITFGDQHISKSPFKIEVGPYK-ESKIRAYGPGLEGGVVQQKA 1037
Score = 77.8 bits (190), Expect(2) = 6e-83, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +1
Query: 250 SVMTYLSQFPKAKLKPGAPVRSKQLNPKKAIAYGPGIEPQGNTVLQPAHFTVQTVDAGVG 309
S+MTYLSQFP AKLK GAP+R + LNP + AYGPG+EP+GN V PA FTV+T AG G
Sbjct: 7 SMMTYLSQFPNAKLKAGAPLRPR-LNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 141 bits (356), Expect(3) = 1e-47, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 11/282 (3%)
Frame = +3
Query: 409 GDVAVVIVDPQGRRDTVEVALEDKGDNTFRCTYRPVMEGPHTVHVAFAGAPITRSPFPVH 468
GDV V I++P+G +T EV + + T+ C Y P MEG + V++ FA I +SPF V
Sbjct: 180 GDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVT 359
Query: 469 VAEAC-NPNACRASGRGLQPKGVRVKEVADFKVFTKGAGSGELKVTVKGPKGTEEPV--K 525
V A + + ASG GL+ GV + F+VF KGAG+G++ V + P G ++ V K
Sbjct: 360 VEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPK 539
Query: 526 VREA--GDGVFECEYYPVVPGKYVVTITWGGYAIPRSPFEVQVSPEAGAQKVRAWGPGLE 583
V+ A D + EY + G + V + + G IP SPF VQV+P + A+ A G G++
Sbjct: 540 VQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQ 719
Query: 584 TG--QVGKSADFVVEAIGTEVGTLGFSIEGPSQAKIECDDKG----DGSCDVRYWPTEPG 637
+V ADF V G G + I GP + +C K + Y P++PG
Sbjct: 720 PRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPG 899
Query: 638 EYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKVKAFGPGLE 679
Y +++ D+ I SPF + P K++A+GPGLE
Sbjct: 900 NYIINITFGDQHISKSPFKIEVGPYK----ESKIRAYGPGLE 1013
Score = 56.6 bits (135), Expect(3) = 1e-47, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +2
Query: 717 IKVIPNGDGTFRCSYVPTKPIKHTIIVSWGGVNVPKSPFRVNVGEGS--HPERVKVYGPG 774
I+ + NGDG+ Y+PT P ++ + + ++PKSPF ++ + E+V GPG
Sbjct: 1109 IECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPG 1288
Query: 775 VEKTGLKANEPTYFTVDCSEAGQGDVSI 802
+EK+G+ N+ FTVD AG+ + I
Sbjct: 1289 LEKSGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 33.5 bits (75), Expect(3) = 1e-47, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 378 KVSARGPGLEPVGNVANKPTYFDIYTAGAGTG 409
+V A GPGLEP GN P F + T AG G
Sbjct: 88 RVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 95.1 bits (235), Expect(3) = 4e-39, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 113/263 (42%), Gaps = 13/263 (4%)
Frame = +3
Query: 1186 EAELTIEILSDAGVK--AEVLIQNNADGTYHITYSPAFPGTYTITIKYGGHPIPKFPTRV 1243
+ ++ + IL+ GV+ EV N+ + TY Y P G Y + I + I K P V
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1244 HVQPAV-DTSGIKVSGPGVEPHGVLREVTTEFTVDARSLTATGGNHVTARVLNPSGAKTD 1302
V+ A D S + SGPG+E GV+ T F V + G V +L+P G K +
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVK---GAGNGKVDVVILDPHGRKDN 527
Query: 1303 T----YVTDNGDGTYRVQYTAYEEGVHLVEVLYDEVAVPKSPFRVGVTEGCDPTRVRAFG 1358
+ D TY V+Y ++G+H V V + +P SPF V V + A G
Sbjct: 528 VRPKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATG 707
Query: 1359 PGLE--GGLVNKANRFTVXXXXXXXXXXXXXXXXPSEAKMSCKDNK--DGSCTVE--YIP 1412
G++ G V F V P + C+ K D E Y P
Sbjct: 708 RGVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNP 887
Query: 1413 FTPGDYDVNITFGGQPIPGSPFR 1435
PG+Y +NITFG Q I SPF+
Sbjct: 888 SKPGNYIINITFGDQHISKSPFK 956
Score = 73.9 bits (180), Expect(3) = 4e-39, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +2
Query: 1466 FTVDCSQAGRAPLQVAVLGPTGVAEPVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEV 1525
FTV+ + A L ++ GP+ +E DNGDG+ V Y P G Y V + +D+++
Sbjct: 1040 FTVETNGETGA-LGFSIEGPSQAQ--IECLDNGDGSADVWYLPTMPGEYAVHILCSDEDI 1210
Query: 1526 PRSPFKIKVLPS--HDASKVRASGPGLNASGIPASLPVEFTIDARDAGQGLLTVQILD 1581
P+SPF + P+ DA KV A GPGL SG+ + EFT+D + AG+ L + +D
Sbjct: 1211 PKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVITGMD 1384
Score = 34.3 bits (77), Expect(3) = 4e-39, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 1139 AHIPGSPFKA--TIQPVFDPSKVRASGPGLER--GKAGEAATFTVDCSEAGEA 1187
+ P + KA ++P +P++VRA GPGLE + G A FTV+ AG
Sbjct: 25 SQFPNAKLKAGAPLRPRLNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 112 bits (279), Expect(3) = 6e-38, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 133/290 (45%), Gaps = 3/290 (1%)
Frame = +3
Query: 700 KGDLKLYAQDADGCPIDIKVIPNGDG--TFRCSYVPTKPIKHTIIVSWGGVNVPKSPFRV 757
KGD+++ + G +V N D T+ C+YVPT + + + + + KSPF V
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 758 NV-GEGSHPERVKVYGPGVEKTGLKANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPVEA 816
V G +V GPG+EKTG+ A + T+F V AG G V + I G V
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRP 536
Query: 817 XXXXXXXXXXXXTFTVKYTPPGAGHYTIMVLFANQEIPASPFHIKVDPSHDASKVKAEGP 876
T+ V+Y G +++ V FA +IP SPF ++V P+ +A A G
Sbjct: 537 KVQSAPDKDA--TYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGR 710
Query: 877 GLSRTGVEVGKPTHFTVLTKGAGKAKLDVHFAGAAKGEAVRDFEIIDNHDYSYTVKYTAV 936
G+ GV V F V TKGAG ++ V G E + + + + Y
Sbjct: 711 GVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPS 890
Query: 937 QQGNMAVTVTYGGDPVPKSPFVVNVAPPLDLSKVKVQGLNSKVAVGQEQA 986
+ GN + +T+G + KSPF + V P SK++ G + V Q++A
Sbjct: 891 KPGNYIINITFGDQHISKSPFKIEVG-PYKESKIRAYGPGLEGGVVQQKA 1037
Score = 44.3 bits (103), Expect(3) = 6e-38, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1
Query: 661 PAPPDCFPDKVKAFGPGLEPTGCIVDRPAEFTIDARAAGKG 701
P P P +V+A+GPGLEP G V PA FT++ +AG+G
Sbjct: 61 PLRPRLNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 42.7 bits (99), Expect(3) = 6e-38, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +2
Query: 984 EQAFSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGGGAEAQAVRYMPPEEGPYKVDITY 1043
E F+V T G G L + PS+ I C L+ G G+ V Y+P G Y V I
Sbjct: 1031 EGRFTVETNGE--TGALGFSIEGPSQAQIEC-LDNGDGS--ADVWYLPTMPGEYAVHILC 1195
Query: 1044 DGHPVPGSPFAVEGVLPP---DPSKVCAYGPGL-KGGLV-GTPAPFSIDTK 1089
+P SPF + + P D KV A GPGL K G+ A F++DTK
Sbjct: 1196 SDEDIPKSPFMAD-IKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTK 1345
Score = 110 bits (274), Expect(2) = 5e-34, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Frame = +3
Query: 278 KAIAYGPGIEPQGNTVLQPAHFTVQTVDAGVGEVLVYIEDPEGHTEEA--KVVPNNDKDR 335
K A GPG+E G + F V AG G+V V I DP G + KV DKD
Sbjct: 387 KVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDA 566
Query: 336 TYAVSYVPKVAGLHKVTVLFAGQNIERSPFEVNVGMALGDANKVSARGPGLEPVGNVANK 395
TY V YV GLH V V FAG I SPF V V A +A A G G++P G
Sbjct: 567 TYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPA-SNAKACYATGRGVQPRGVRVKD 743
Query: 396 PTYFDIYTAGAGTGDVAVVIVDPQGRRDTVEVALEDKGDNTFRCTYRPVMEGPHTVHVAF 455
F ++T GAG G+VAV I+ P G + ++ + C Y P G + +++ F
Sbjct: 744 RADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITF 923
Query: 456 AGAPITRSPFPVHVAEACNPNACRASGRGLQPKGVRVKEVADFK 499
I++SPF + V + RA G GL+ V+ K V ++
Sbjct: 924 GDQHISKSPFKIEVGPY-KESKIRAYGPGLEGGVVQQKAVLLWR 1052
Score = 55.5 bits (132), Expect(2) = 5e-34, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Frame = +2
Query: 498 FKVFTKGAGSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYAI 557
F V T G +G L +++GP ++ ++ + GDG + Y P +PG+Y V I I
Sbjct: 1040 FTVETNGE-TGALGFSIEGP--SQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDI 1210
Query: 558 PRSPFEVQVSPEA--GAQKVRAWGPGLETGQVG--KSADFVVE 596
P+SPF + P A A+KV A GPGLE V K A+F V+
Sbjct: 1211 PKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVD 1339
Score = 111 bits (277), Expect(3) = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 122/277 (44%), Gaps = 15/277 (5%)
Frame = +3
Query: 1289 VTARVLNPSGAKTDTYVTDNGDG--TYRVQYTAYEEGVHLVEVLYDEVAVPKSPFRVGVT 1346
V +LNP G + V N D TY Y EG + V +L+ + KSPF V V
Sbjct: 186 VEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTV- 362
Query: 1347 EGC--DPTRVRAFGPGLE--GGLVNKANRFTVXXXXXXXXXXXXXXXXPS------EAKM 1396
EG D ++V A GPGLE G + K F V P K+
Sbjct: 363 EGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKV 542
Query: 1397 SCKDNKDGSCTVEYIPFTPGDYDVNITFGGQPIPGSPFRXXXXXXXXXXXXXCSGPGLG- 1455
+KD + VEY+ G + VN+ F G IP SPF +G G+
Sbjct: 543 QSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQP 722
Query: 1456 TGVRARVPQTFTVDCSQAGRAPLQVAVLGPTGVAEPVEVRDNGDGTHTVH--YTPATDGP 1513
GVR + F V AG + V ++GP GV E +++ D Y P+ G
Sbjct: 723 RGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGN 902
Query: 1514 YTVAVKYADQEVPRSPFKIKVLPSHDASKVRASGPGL 1550
Y + + + DQ + +SPFKI+V P + SK+RA GPGL
Sbjct: 903 YIINITFGDQHISKSPFKIEVGP-YKESKIRAYGPGL 1010
Score = 46.6 bits (109), Expect(3) = 2e-33, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 1586 PKKANIR--DNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPTGDASKCLVT 1643
P +A I DNGDG+ V YLP M G Y + I ++IP SPF P D V
Sbjct: 1094 PSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVI 1273
Query: 1644 VSIGGHGLGACLGPRIQIGEETVITVDAKAAGKGKVTCT 1682
G GL + + TVD KAAGK + T
Sbjct: 1274 AK--GPGLEKS---GVAPNKWAEFTVDTKAAGKAPLVIT 1375
Score = 26.2 bits (56), Expect(3) = 2e-33, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 1235 PIPKFPTRVHVQPAVDTSGIKVSGPGVEPHGVLREVTTEFTVDARS 1280
P K ++P ++ + ++ GPG+EP G FTV+ S
Sbjct: 34 PNAKLKAGAPLRPRLNPARVRAYGPGLEPKGNQVGAPARFTVETFS 171
Score = 140 bits (353), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Frame = +3
Query: 1475 RAPLQVAVLGPTGVAEPVEVRDNGDG--THTVHYTPATDGPYTVAVKYADQEVPRSPFKI 1532
+ ++V++L P GV E EV N D T++ Y P +G Y V + +A++ + +SPF +
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1533 KVL-PSHDASKVRASGPGLNASGIPASLPVEFTIDARDAGQGLLTVQILDPEGKPKKANI 1591
V + DASKV ASGPGL +G+ A+ F + + AG G + V ILDP G +K N+
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHG--RKDNV 530
Query: 1592 R------DNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPTGDASKCLVTVS 1645
R + D TY V Y+ G +++ + + G +IP SPF + P +A C T
Sbjct: 531 RPKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYAT-- 704
Query: 1646 IGGHGLGACLGPR-IQIGEETVITVDAKAAGKGKVTCTVSTPDGAE--LDVDVVENHDGT 1702
G + PR +++ + V K AG G+V + P G E + V +
Sbjct: 705 ------GRGVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEV 866
Query: 1703 FDIYYTAPEPGKYVITIRFGGEHIPNSPFHV 1733
++ Y +PG Y+I I FG +HI SPF +
Sbjct: 867 WECVYNPSKPGNYIINITFGDQHISKSPFKI 959
Score = 93.2 bits (230), Expect(2) = 3e-31, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 24/293 (8%)
Frame = +3
Query: 1796 KGELTGEVRMPSG--KTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQF 1853
KG++ + P G +T ++++ T + Y PT +G +++ I + I SP
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1854 YVD--AINSRHVSAYGPGLSH-GMV-NKPATFTIVTKDAGEGGLSLAVEGPS------KA 1903
V+ A ++ V+A GPGL G+V K F + K AG G + + + P +
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRP 536
Query: 1904 EITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKITGDDSMRTSQ------ 1957
++ +KD T V Y+ G +S+ V F IP SPF ++ + +
Sbjct: 537 KVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGV 716
Query: 1958 ----LNVGTSTDVSLKITEGDLSQLTASIRAPSGNEEPCLLKRLPNR--HIGISFTPKEV 2011
+ V D + ++ I P G EE C LK++P++ + P +
Sbjct: 717 QPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKP 896
Query: 2012 GEHVVSVRKSGKHVTNSPFKILVGPSEIGDASKVRVWGKGLSEGQTFQVAEFI 2064
G +++++ +H++ SPFKI VGP + SK+R +G GL G Q A +
Sbjct: 897 GNYIINITFGDQHISKSPFKIEVGPYK---ESKIRAYGPGLEGGVVQQKAVLL 1046
Score = 62.8 bits (151), Expect(2) = 3e-31, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = +2
Query: 2063 FIVDTRNAGYGGLGLSIEGPSKVDINCEDMEDGTCKVTYCPTEPGTYIINIKFADKHVPG 2122
F V+T N G LG SIEGPS+ I C D DG+ V Y PT PG Y ++I +D+ +P
Sbjct: 1040 FTVET-NGETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPK 1216
Query: 2123 SPFTVKV 2129
SPF +
Sbjct: 1217 SPFMADI 1237
Score = 121 bits (303), Expect(2) = 7e-31, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 135/280 (48%), Gaps = 11/280 (3%)
Frame = +3
Query: 1100 VEGPCEAKIECQDNGDGSCAVSYLPTEPGEYTINILFAEAHIPGSPFKATIQ-PVFDPSK 1158
VE CE + N SCA Y+PT G Y +NILFA I SPF T++ D SK
Sbjct: 216 VEETCEVEFNNDRNLTYSCA--YVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASK 389
Query: 1159 VRASGPGLERGKAGEAAT----FTVDCSEAGEAELTIEILSDAG----VKAEVLIQNNAD 1210
V ASGPGLE K G AT F V AG ++ + IL G V+ +V + D
Sbjct: 390 VTASGPGLE--KTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKD 563
Query: 1211 GTYHITYSPAFPGTYTITIKYGGHPIPKFPTRVHVQPAVDTSGIKVSGPGVEPHGVLREV 1270
TY + Y G +++ + + G IP P V V PA + +G GV+P GV +
Sbjct: 564 ATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPRGVRVKD 743
Query: 1271 TTEFTVDARSLTATGGNHVTARVLNPSGAKTDTYVTDNGDG--TYRVQYTAYEEGVHLVE 1328
+F V + G V +++ P G + + D + Y + G +++
Sbjct: 744 RADFYVHTK---GAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIIN 914
Query: 1329 VLYDEVAVPKSPFRVGVTEGCDPTRVRAFGPGLEGGLVNK 1368
+ + + + KSPF++ V +++RA+GPGLEGG+V +
Sbjct: 915 ITFGDQHISKSPFKIEVGP-YKESKIRAYGPGLEGGVVQQ 1031
Score = 33.5 bits (75), Expect(2) = 7e-31, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Frame = +1
Query: 1062 DPSKVCAYGPGL--KGGLVGTPAPFSIDT 1088
+P++V AYGPGL KG VG PA F+++T
Sbjct: 79 NPARVRAYGPGLEPKGNQVGAPARFTVET 165
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +2
Query: 559 RSPFEVQVSPEAGAQKVRAWGPGLETGQVGKSAD--FVVEAIGTEVGTLGFSIEGPSQAK 616
+ P + + P G Q W G+ G +A+ F VE G E G LGFSIEGPSQA+
Sbjct: 941 QKPLQDRGGPLXGEQDQGLW---TRPGRRGGAAEGRFTVETNG-ETGALGFSIEGPSQAQ 1108
Query: 617 IECDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKVKAFGP 676
IEC D GDGS DV Y PT PGEYAVH++C DEDI SPF+A I+PA D +KV A GP
Sbjct: 1109 IECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPA-ADFDAEKVIAKGP 1285
Query: 677 GLEPTGCIVDRPAEFTIDARAAGKGDLKLYAQDAD 711
GLE +G ++ AEFT+D +AAGK L + D D
Sbjct: 1286 GLEKSGVAPNKWAEFTVDTKAAGKAPLVITGMDTD 1390
Score = 106 bits (265), Expect(2) = 1e-25, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Frame = +3
Query: 1393 EAKMSCKDNKDGSCTVEYIPFTPGDYDVNITFGGQPIPGSPFRXXXXXXX-XXXXXXCSG 1451
E + + N SC Y+P G Y VNI F + I SPF SG
Sbjct: 231 EVEFNNDRNLTYSCA--YVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASKVTASG 404
Query: 1452 PGL-GTGVRARVPQTFTVDCSQAGRAPLQVAVLGPTG----VAEPVEVRDNGDGTHTVHY 1506
PGL TGV A F V AG + V +L P G V V+ + D T+ V Y
Sbjct: 405 PGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYLVEY 584
Query: 1507 TPATDGPYTVAVKYADQEVPRSPFKIKVLPSHDASKVRASGPGLNASGIPASLPVEFTID 1566
G ++V V +A ++P SPF ++V P+ +A A+G G+ G+ +F +
Sbjct: 585 VTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPRGVRVKDRADFYVH 764
Query: 1567 ARDAGQGLLTVQILDPEGKPKKANIRDNGDG--TYTVSYLPDMSGRYTITIKYGGDEIPY 1624
+ AG G + VQI+ P G +K ++ D + Y P G Y I I +G I
Sbjct: 765 TKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISK 944
Query: 1625 SPFRIHALP 1633
SPF+I P
Sbjct: 945 SPFKIEVGP 971
Score = 30.8 bits (68), Expect(2) = 1e-25, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = +1
Query: 1350 DPTRVRAFGPGLE--GGLVNKANRFTV 1374
+P RVRA+GPGLE G V RFTV
Sbjct: 79 NPARVRAYGPGLEPKGNQVGAPARFTV 159
Score = 100 bits (248), Expect(2) = 2e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 134/293 (45%), Gaps = 15/293 (5%)
Frame = +3
Query: 900 KAKLDVHFAGAAKGEAVRDFEIIDNHDYSYTVKYTAVQQGNMAVTVTYGGDPVPKSPFVV 959
K ++V E + E ++ + +Y+ Y +G+ V + + + KSPF V
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 960 NVAPPL-DLSKVKVQG---LNSKVAVGQEQAFSVNTRGAGGQGQLDVRMTSPSRRPIPCK 1015
V D SKV G + V ++ F V +GAG G++DV + P R +
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAG-NGKVDVVILDPHGRKDNVR 533
Query: 1016 LEPGGGAEAQA---VRYMPPEEGPYKVDITYDGHPVPGSPFAVEGVLPPDPSKVC-AYGP 1071
+ + A V Y+ ++G + V++ + G +P SPF V+ V P +K C A G
Sbjct: 534 PKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQ-VAPASNAKACYATGR 710
Query: 1072 GL--KGGLVGTPAPFSIDTKXXXXXXXXXXVEGPCEAKIECQ-----DNGDGSCAVSYLP 1124
G+ +G V A F + TK + GP + +CQ D + V Y P
Sbjct: 711 GVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECV-YNP 887
Query: 1125 TEPGEYTINILFAEAHIPGSPFKATIQPVFDPSKVRASGPGLERGKAGEAATF 1177
++PG Y INI F + HI SPFK + P + SK+RA GPGLE G + A
Sbjct: 888 SKPGNYIINITFGDQHISKSPFKIEVGP-YKESKIRAYGPGLEGGVVQQKAVL 1043
Score = 36.6 bits (83), Expect(2) = 2e-25, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 843 TIMVLFANQEIPA-SPFHIKVDPSHDASKVKAEGPGLSRTGVEVGKPTHFTVLTKGAGKA 901
T + F N ++ A +P +++P+ +V+A GPGL G +VG P FTV T AG+
Sbjct: 16 TYLSQFPNAKLKAGAPLRPRLNPA----RVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 133/268 (49%), Gaps = 24/268 (8%)
Frame = +3
Query: 2358 AEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASLSDDARRLTVTS- 2416
E+ F + ++ + +YV G Y+V+I F ++ I SPF V V + DA ++T +
Sbjct: 228 CEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASKVTASGP 407
Query: 2417 -LQETGLKVNQPASFAVQLNGA-RGVIDARVHTPSGA---VEECYVSELDSDK-HTIRFI 2470
L++TG+ + F V + GA G +D + P G V S D D + + ++
Sbjct: 408 GLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYLVEYV 587
Query: 2471 PHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQAGDPGLVSAYGPGLE--GGTTGVSSEFI 2528
+ G+HS++V F G+ IP SPF ++V S A A G G++ G ++F
Sbjct: 588 TIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNA---KACYATGRGVQPRGVRVKDRADFY 758
Query: 2529 VNTQNAGSGALSVTIDGPSKVQLDCR-----ECPEGHVVTYTPMAPGNYLIAIKYGGPQH 2583
V+T+ AG G ++V I GP V+ C+ + PE Y P PGNY+I I +G QH
Sbjct: 759 VHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGD-QH 935
Query: 2584 IVGSPFKAKV----------TGPRLSGG 2601
I SPFK +V GP L GG
Sbjct: 936 ISKSPFKIEVGPYKESKIRAYGPGLEGG 1019
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 132/284 (46%), Gaps = 14/284 (4%)
Frame = +3
Query: 2250 DMTAQVTSPSGKTEAAEIVEGEDS--AYSVRFVPQEMGPHTVTVKYRGQHVPGSPFQFTV 2307
D+ + +P G E E+ D YS +VP G + V + + + + SPF TV
Sbjct: 183 DVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTV 362
Query: 2308 GPLGEGGAHKVRAGGTGLERG--VAGVPAEFSIWTREAGAGGLSIAVEGPS------KAE 2359
G A KV A G GLE+ VA F ++ + AG G + + + P + +
Sbjct: 363 -EGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPK 539
Query: 2360 IAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASLSD-DARRLTVTSLQ 2418
+ KD + V YV + G + V++ F IP+SPF V VA S+ A T +Q
Sbjct: 540 VQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQ 719
Query: 2419 ETGLKVNQPASFAVQLNGA-RGVIDARVHTPSGAVEECYVSELDSDKHTIRFI--PHENG 2475
G++V A F V GA G + ++ P G E+C + ++ + P + G
Sbjct: 720 PRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPG 899
Query: 2476 VHSIDVKFNGAHIPGSPFKIRVGEQSQAGDPGLVSAYGPGLEGG 2519
+ I++ F HI SPFKI VG ++ + AYGPGLEGG
Sbjct: 900 NYIINITFGDQHISKSPFKIEVGPYKESK----IRAYGPGLEGG 1019
Score = 87.4 bits (215), Expect(2) = 7e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Frame = +3
Query: 1890 EGGLSLAVEGPSKAEITCK----DNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTA 1945
+G + +++ P E TC+ ++++ T + +Y+PT G Y + + F +K I SPFT
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1946 KI---TGDDSMRTSQ--------LNVGTSTDVSLKITEGDLSQLTASIRAPSGNEEPCL- 1993
+ GD S T+ + T + + ++ I P G ++
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRP 536
Query: 1994 -LKRLPNRHIG--ISFTPKEVGEHVVSVRKSGKHVTNSPFKILVGPSEIGDASKVRVWGK 2050
++ P++ + + + G H V+V +G + NSPF + V P+ +A G+
Sbjct: 537 KVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPAS--NAKACYATGR 710
Query: 2051 GLSEG--QTFQVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDM----EDGTCKVTYCPT 2104
G+ + A+F V T+ AG G + + I GP V+ C+ + + Y P+
Sbjct: 711 GVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPS 890
Query: 2105 EPGTYIINIKFADKHVPGSPFTVKVTGEGRMKESITR 2141
+PG YIINI F D+H+ SPF ++V G KES R
Sbjct: 891 KPGNYIINITFGDQHISKSPFKIEV---GPYKESKIR 992
Score = 30.4 bits (67), Expect(2) = 7e-20, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 1848 GSPLQFYVDAINSRHVSAYGPGLS--HGMVNKPATFTIVTKDAGEG 1891
G+PL+ +N V AYGPGL V PA FT+ T AG G
Sbjct: 55 GAPLR---PRLNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 62.0 bits (149), Expect(2) = 9e-20, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Frame = +2
Query: 2346 GGLSIAVEGPSKAEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASL 2405
G L ++EGPS+A+I D DGS V Y+ PG+Y V I +DE IP SPF+ +
Sbjct: 1067 GALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPA 1246
Query: 2406 SD-DARRLTVT--SLQETGLKVNQPASFAVQLNGA 2437
+D DA ++ L+++G+ N+ A F V A
Sbjct: 1247 ADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAA 1351
Score = 55.5 bits (132), Expect(2) = 9e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 112/286 (39%), Gaps = 29/286 (10%)
Frame = +3
Query: 2073 GGLGLSIEGPSKVDINCE----DMEDGTCKVTYCPTEPGTYIINIKFADKHVPGSPFTVK 2128
G + +SI P V+ CE + + T Y PT G Y +NI FA+K + SPFTV
Sbjct: 180 GDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVT 359
Query: 2129 VTGEGRMKESITRR----RQAPSIATIGSTCDLNLKIPGNWFQMV-----SAQERLTRTF 2179
V G +T + +AT + ++ +K GN V ++ R
Sbjct: 360 VEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPK 539
Query: 2180 TRSSHTYTRTERTEISKTRGGETKREVRVEESTQVGGDPF----------PAVFGDFLGR 2229
+S+ T E G V S Q+ PF A + G
Sbjct: 540 VQSAPDKDATYLVEYVTIDQGLHSVNVFFAGS-QIPNSPFGVQVAPASNAKACYATGRGV 716
Query: 2230 E----RLGSFGSITRQQEGEASSQDMTAQVTSPSGKTEAAEI--VEGEDSAYSVRFVPQE 2283
+ R+ +G A ++ Q+ P G E ++ V + + + P +
Sbjct: 717 QPRGVRVKDRADFYVHTKG-AGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSK 893
Query: 2284 MGPHTVTVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLERGV 2329
G + + + + QH+ SPF+ VGP E K+RA G GLE GV
Sbjct: 894 PGNYIINITFGDQHISKSPFKIEVGPYKES---KIRAYGPGLEGGV 1022
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Frame = +2
Query: 1100 VEGPCEAKIECQDNGDGSCAVSYLPTEPGEYTINILFAEAHIPGSPFKATIQPV--FDPS 1157
+EGP +A+IEC DNGDGS V YLPT PGEY ++IL ++ IP SPF A I+P FD
Sbjct: 1085 IEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAE 1264
Query: 1158 KVRASGPGLERGKAG--EAATFTVDCSEAGEAELTI 1191
KV A GPGLE+ + A FTVD AG+A L I
Sbjct: 1265 KVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 65.5 bits (158), Expect(2) = 7e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Frame = +3
Query: 211 DPNQPVQNAREAMQQADDWLGVPQVIAPEEIVDPNVDEHSVMTYL--SQFPKAKLKPGAP 268
DP+ N R +Q A D V E V + HSV + SQ P + P
Sbjct: 504 DPHGRKDNVRPKVQSAPDKDATYLV----EYVTIDQGLHSVNVFFAGSQIPNS---PFGV 662
Query: 269 VRSKQLNPKKAIAYGPGIEPQGNTVLQPAHFTVQTVDAGVGEVLVYIEDPEGHTEEAKVV 328
+ N K A G G++P+G V A F V T AG GEV V I P G E+ ++
Sbjct: 663 QVAPASNAKACYATGRGVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLK 842
Query: 329 PNNDKDRTYAVSYVPKVAGLHKVTVLFAGQNIERSPFEVNVGMALGDANKVSARGPGLE 387
D+ + Y P G + + + F Q+I +SPF++ VG +K+ A GPGLE
Sbjct: 843 KVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKIEVGPY--KESKIRAYGPGLE 1013
Score = 48.9 bits (115), Expect(2) = 7e-19, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +2
Query: 425 VEVALEDKGDNTFRCTYRPVMEGPHTVHVAFAGAPITRSPFPVHVAEACNPNACR--ASG 482
++ D GD + Y P M G + VH+ + I +SPF + A + +A + A G
Sbjct: 1103 AQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKG 1282
Query: 483 RGLQPKGVRVKEVADFKVFTKGAGSGELKVT 513
GL+ GV + A+F V TK AG L +T
Sbjct: 1283 PGLEKSGVAPNKWAEFTVDTKAAGKAPLVIT 1375
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 16/304 (5%)
Frame = +3
Query: 2438 RGVIDARVHTPSGAVEECYVSELDSDK---HTIRFIPHENGVHSIDVKFNGAHIPGSPFK 2494
+G ++ + P G E C V E ++D+ ++ ++P G + +++ F I SPF
Sbjct: 177 KGDVEVSILNPKGVEETCEV-EFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFT 353
Query: 2495 IRVGEQSQAGDPGLVSAYGPGLEGGTTGVSSE----FIVNTQNAGSGALSVTIDGP---- 2546
+ V + AGD V+A GPGLE TGV + F V + AG+G + V I P
Sbjct: 354 VTV--EGAAGDASKVTASGPGLE--KTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRK 521
Query: 2547 SKVQLDCRECPEG---HVVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTGPRLSGGHS 2603
V+ + P+ ++V Y + G + + + + G Q I SPF +V
Sbjct: 522 DNVRPKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQ-IPNSPFGVQVA--------- 671
Query: 2604 LHETSTVLVETVTKXXXXXXXXXXXIPKFSSDASKVVTRGPGLSQAFVGQKNSFTVDCSK 2663
P ++ A RG V + F V
Sbjct: 672 --------------------------PASNAKACYATGRGVQPRGVRVKDRADFYVHTKG 773
Query: 2664 AGTNMMMVGVHGPKTPCEEVYVKHMGNR--VYNVTYTVKEKGDYILIVKWGDESVPGSPF 2721
AG + V + GP E+ +K + ++ V+ Y + G+YI+ + +GD+ + SPF
Sbjct: 774 AGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPF 953
Query: 2722 KVNV 2725
K+ V
Sbjct: 954 KIEV 965
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 1881 FTIVTKDAGE-GGLSLAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIP 1939
FT+ T GE G L ++EGPS+A+I C DN DG+ V YLPT PG+Y++ + D+ IP
Sbjct: 1040 FTVETN--GETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIP 1213
Query: 1940 GSPFTAKI 1947
SPF A I
Sbjct: 1214 KSPFMADI 1237
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +2
Query: 832 VKYTPPGAGHYTIMVLFANQEIPASPFHIKVDPS--HDASKVKAEGPGLSRTGVEVGKPT 889
V Y P G Y + +L ++++IP SPF + P+ DA KV A+GPGL ++GV K
Sbjct: 1145 VWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWA 1324
Query: 890 HFTVLTKGAGKAKL 903
FTV TK AGKA L
Sbjct: 1325 EFTVDTKAAGKAPL 1366
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Frame = +2
Query: 1359 PGLEGGLVNKANRFTVXXXXXXXXXXXXXXXXPSEAKMSCKDNKDGSCTVEYIPFTPGDY 1418
PG GG RFTV PS+A++ C DN DGS V Y+P PG+Y
Sbjct: 1007 PGRRGGAAE--GRFTVETNGETGALGFSIEG-PSQAQIECLDNGDGSADVWYLPTMPGEY 1177
Query: 1419 DVNITFGGQPIPGSPFRXXX--XXXXXXXXXXCSGPGL-GTGVRARVPQTFTVDCSQAGR 1475
V+I + IP SPF GPGL +GV FTVD AG+
Sbjct: 1178 AVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGK 1357
Query: 1476 APLQV 1480
APL +
Sbjct: 1358 APLVI 1372
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Frame = +2
Query: 1168 RGKAGEAATFTVDCS-EAGEAELTIEILSDAGVKAEVLIQNNADGTYHITYSPAFPGTYT 1226
RG A E FTV+ + E G +IE S +A++ +N DG+ + Y P PG Y
Sbjct: 1016 RGGAAEG-RFTVETNGETGALGFSIEGPS----QAQIECLDNGDGSADVWYLPTMPGEYA 1180
Query: 1227 ITIKYGGHPIPKFPTRVHVQPAVDTSGIKV--SGPGVEPHGVLREVTTEFTVDARS 1280
+ I IPK P ++PA D KV GPG+E GV EFTVD ++
Sbjct: 1181 VHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKA 1348
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +2
Query: 298 HFTVQTVDAGVGEVLVYIEDPEGHTEEAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAG 357
FTV+T + G + IE P +A++ ++ D + V Y+P + G + V +L +
Sbjct: 1037 RFTVET-NGETGALGFSIEGPS----QAQIECLDNGDGSADVWYLPTMPGEYAVHILCSD 1201
Query: 358 QNIERSPFEVNVGMALG-DANKVSARGPGLEPVGNVANKPTYFDIYTAGAGTGDVAVVIV 416
++I +SPF ++ A DA KV A+GPGLE G NK F + T AG + + +
Sbjct: 1202 EDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVITGM 1381
Query: 417 D 417
D
Sbjct: 1382 D 1384
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 76/189 (40%), Gaps = 3/189 (1%)
Frame = +2
Query: 2486 AHIPGSPFKIRVGEQSQAGDPGLVSAYGPGLEGGTTGVSSEFIVNTQNAGSGALSVTIDG 2545
AH+ P + R G D GL + PG GG F V T N +GAL +I+G
Sbjct: 932 AHLQ-KPLQDRGGPLXGEQDQGLWTR--PGRRGGA--AEGRFTVET-NGETGALGFSIEG 1093
Query: 2546 PSKVQLDCRECPEGHV-VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTGPRLSGGHSL 2604
PS+ Q++C + +G V Y P PG Y + I + I SPF A +
Sbjct: 1094 PSQAQIECLDNGDGSADVWYLPTMPGEYAVHI-LCSDEDIPKSPFMADIK---------- 1240
Query: 2605 HETSTVLVETVTKXXXXXXXXXXXIPKFSSDASKVVTRGPGLSQAFVG--QKNSFTVDCS 2662
P DA KV+ +GPGL ++ V + FTVD
Sbjct: 1241 -------------------------PAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTK 1345
Query: 2663 KAGTNMMMV 2671
AG +++
Sbjct: 1346 AAGKAPLVI 1372
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +2
Query: 890 HFTVLTKGAGKAKLDVHFAGAAKGEAVRDFEIIDNHDYSYTVKYTAVQQGNMAVTVTYGG 949
FTV T G A + +G + E +DN D S V Y G AV +
Sbjct: 1037 RFTVETNGETGA-----LGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSD 1201
Query: 950 DPVPKSPFVVNVAPPLDLSKVKV----QGL-NSKVAVGQEQAFSVNTRGAG 995
+ +PKSPF+ ++ P D KV GL S VA + F+V+T+ AG
Sbjct: 1202 EDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAG 1354
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +2
Query: 1274 FTVDARSLTATGGNHVTARVLNPSGAKTDTYVTDNGDGTYRVQYTAYEEGVHLVEVLYDE 1333
FTV+ T G + PS A+ + DNGDG+ V Y G + V +L +
Sbjct: 1040 FTVETNGETGALGFSIE----GPSQAQIECL--DNGDGSADVWYLPTMPGEYAVHILCSD 1201
Query: 1334 VAVPKSPFRVGVTEGC--DPTRVRAFGPGLEGGLV--NKANRFTV 1374
+PKSPF + D +V A GPGLE V NK FTV
Sbjct: 1202 EDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTV 1336
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 1689 AELDVDVVENHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVLACDPLPHVEEPAEM 1748
++ ++ ++N DG+ D++Y PG+Y + I E IP SPF D P + AE
Sbjct: 1097 SQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMA---DIKPAADFDAEK 1267
Query: 1749 LQMRQPYAPLRPGTCPTHWA 1768
+ + P + G P WA
Sbjct: 1268 VIAKGP-GLEKSGVAPNKWA 1324
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Frame = +2
Query: 1792 FTVQK----GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIP 1847
FTV+ G L + PS A+ DN DG+ V Y PT G + + I IP
Sbjct: 1040 FTVETNGETGALGFSIEGPS--QAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIP 1213
Query: 1848 GSPLQFYVD---AINSRHVSAYGPGLSHGMV--NKPATFTIVTKDAGEGGLSL 1895
SP + ++ V A GPGL V NK A FT+ TK AG+ L +
Sbjct: 1214 KSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +2
Query: 1971 TEGDLSQLTASIRAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHVVSVRKSGKHVTNSPF 2030
T G+ L SI PS + CL + + + P GE+ V + S + + SPF
Sbjct: 1052 TNGETGALGFSIEGPSQAQIECLDNG--DGSADVWYLPTMPGEYAVHILCSDEDIPKSPF 1225
Query: 2031 KILVGPSEIGDASKVRVWGKGLSEGQTF--QVAEFIVDTRNAG 2071
+ P+ DA KV G GL + + AEF VDT+ AG
Sbjct: 1226 MADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAG 1354
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = +2
Query: 2228 GRERLGSFGSITRQQEGEASSQDMTAQVTSPSGKTEAAEIVEGEDSAYSVRFVPQEMGPH 2287
GR + G T + GE + + + PS E ++ D + V ++P G +
Sbjct: 1010 GRRGGAAEGRFTVETNGETGA--LGFSIEGPS--QAQIECLDNGDGSADVWYLPTMPGEY 1177
Query: 2288 TVTVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLER-GVA-GVPAEFSIWTREAGA 2345
V + + +P SPF + P + A KV A G GLE+ GVA AEF++ T+ AG
Sbjct: 1178 AVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGK 1357
Query: 2346 GGLSI 2350
L I
Sbjct: 1358 APLVI 1372
Score = 37.0 bits (84), Expect = 0.100, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 764 HPERVKVYGPGVEKTGLKANEPTYFTVDCSEAGQG 798
+P RV+ YGPG+E G + P FTV+ AG+G
Sbjct: 79 NPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 34.3 bits (77), Expect = 0.78, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 1536 PSHDASKVRASGPGLNASGIPASLPVEFTIDARDAGQGL 1574
P + ++VRA GPGL G P FT++ AG+G+
Sbjct: 70 PRLNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRGM 186
Score = 32.7 bits (73), Expect = 2.3, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 2490 GSPFKIRVGEQSQAGDPGLVSAYGPGLE--GGTTGVSSEFIVNTQNAGSG 2537
G+P + R+ +P V AYGPGLE G G + F V T +AG G
Sbjct: 55 GAPLRPRL-------NPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
>17351
Length = 654
Score = 258 bits (658), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 161/217 (74%)
Frame = -1
Query: 2247 SSQDMTAQVTSPSGKTEAAEIVEGEDSAYSVRFVPQEMGPHTVTVKYRGQHVPGSPFQFT 2306
+S D+ A VTSPS TE AEI E ED YSV FVP+E+G HTV+V+Y H+PGSPFQFT
Sbjct: 651 TSFDLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFT 472
Query: 2307 VGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPSKAEIAFEDRK 2366
VGPL + G+H V+AGG+GLERGV G PAEF++WTREAG G L+I+VEGPSKA+I F+DRK
Sbjct: 471 VGPLRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRK 292
Query: 2367 DGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASLSDDARRLTVTSLQETGLKVNQ 2426
DGSC VSY V EPG+Y V +KFND HIPDSPF V ++ + DA +L V + ++ +
Sbjct: 291 DGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQGNIQADA 112
Query: 2427 PASFAVQLNGARGVIDARVHTPSGAVEECYVSELDSD 2463
P F V+ NGA+G +DA++ PSG ++C++ +D +
Sbjct: 111 PYQFMVRKNGAKGELDAKIVAPSGTDDDCFIQAIDGE 1
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 11/211 (5%)
Frame = -1
Query: 1798 ELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDA 1857
+L V PS T I + +DG +V + P E G+H + ++Y HIPGSP QF V
Sbjct: 642 DLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGP 463
Query: 1858 IN---SRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGT 1914
+ S V A G GL G+V +PA F + T++AG G L+++VEGPSKA+I KD KDG+
Sbjct: 462 LRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGS 283
Query: 1915 CTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKITGD-------DSMRTSQLNVGTSTDVS 1967
C VSY T PG+Y + ++F+D+HIP SPF I+ D + + Q N+
Sbjct: 282 CDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQGNIQADAPYQ 103
Query: 1968 LKITE-GDLSQLTASIRAPSGNEEPCLLKRL 1997
+ + G +L A I APSG ++ C ++ +
Sbjct: 102 FMVRKNGAKGELDAKIVAPSGTDDDCFIQAI 10
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 91/153 (59%)
Frame = -1
Query: 1978 LTASIRAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHVVSVRKSGKHVTNSPFKILVGPS 2037
L A + +PS E ++ + + + F PKE+G H VSVR S H+ SPF+ VGP
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 2038 EIGDASKVRVWGKGLSEGQTFQVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDMEDGTC 2097
+ V+ G GL G + AEF V TR AG G L +S+EGPSK DI +D +DG+C
Sbjct: 459 RDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSC 280
Query: 2098 KVTYCPTEPGTYIINIKFADKHVPGSPFTVKVT 2130
V+Y TEPG Y + +KF D+H+P SPF V ++
Sbjct: 279 DVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYIS 181
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 109/205 (53%), Gaps = 4/205 (1%)
Frame = -1
Query: 507 SGELKVTVKGPKGTEEPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYAIPRSPFEVQV 566
S +L V P E +++E DG++ + P G + V++ + IP SPF+ V
Sbjct: 648 SFDLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTV 469
Query: 567 SP--EAGAQKVRAWGPGLETGQVGKSADFVVEAIGTEVGTLGFSIEGPSQAKIECDDKGD 624
P ++G+ V+A G GLE G VG+ A+F V G+L S+EGPS+A IE D+ D
Sbjct: 468 GPLRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKD 289
Query: 625 GSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKVKAFGPGLEPTGCI 684
GSCDV Y TEPGEY V + +D I DSPF +I P D +V+ F P G I
Sbjct: 288 GSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQF-----PQGNI 124
Query: 685 -VDRPAEFTIDARAA-GKGDLKLYA 707
D P +F + A G+ D K+ A
Sbjct: 123 QADAPYQFMVRKNGAKGELDAKIVA 49
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Frame = -1
Query: 2443 ARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQ 2502
A V +PS E+ + E++ +++ F+P E GVH++ V+++ HIPGSPF+ VG
Sbjct: 633 ACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRD 454
Query: 2503 AGDPGLVSAYGPGLEGGTTGVSSEFIVNTQNAGSGALSVTIDGPSKVQLDCRECPEGHV- 2561
+G LV A G GLE G G +EF V T+ AG G+L+++++GPSK ++ ++ +G
Sbjct: 453 SGS-HLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSCD 277
Query: 2562 VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTGPRLSGGHSL 2604
V+Y PG Y + +K+ +HI SPFK ++ P H L
Sbjct: 276 VSYKVTEPGEYRVGLKFND-RHIPDSPFKVYIS-PDAGDAHKL 154
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 108/201 (53%), Gaps = 4/201 (1%)
Frame = -1
Query: 1109 ECQDNGDGSCAVSYLPTEPGEYTINILFAEAHIPGSPFKATIQPVFDPSK--VRASGPGL 1166
E Q+ DG +V ++P E G +T+++ ++E HIPGSPF+ T+ P+ D V+A G GL
Sbjct: 594 EIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVKAGGSGL 415
Query: 1167 ERGKAGEAATFTVDCSEAGEAELTIEILSDAGVKAEVLIQNNADGTYHITYSPAFPGTYT 1226
ERG GE A F V EAG L I + + KA++ ++ DG+ ++Y PG Y
Sbjct: 414 ERGVVGEPAEFNVWTREAGGGSLAISV--EGPSKADIEFKDRKDGSCDVSYKVTEPGEYR 241
Query: 1227 ITIKYGGHPIPKFPTRVHVQP-AVDTSGIKVSGPGVEPHGVLR-EVTTEFTVDARSLTAT 1284
+ +K+ IP P +V++ P A D ++V P G ++ + +F V R A
Sbjct: 240 VGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQ---FPQGNIQADAPYQFMV--RKNGAK 76
Query: 1285 GGNHVTARVLNPSGAKTDTYV 1305
G + A+++ PSG D ++
Sbjct: 75 G--ELDAKIVAPSGTDDDCFI 19
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Frame = -1
Query: 1026 AVRYMPPEEGPYKVDITYDGHPVPGSPFAVE-GVLPPDPSK-VCAYGPGLKGGLVGTPAP 1083
+V ++P E G + V + Y +PGSPF G L S V A G GL+ G+VG PA
Sbjct: 564 SVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVKAGGSGLERGVVGEPAE 385
Query: 1084 FSIDTKXXXXXXXXXXVEGPCEAKIECQDNGDGSCAVSYLPTEPGEYTINILFAEAHIPG 1143
F++ T+ VEGP +A IE +D DGSC VSY TEPGEY + + F + HIP
Sbjct: 384 FNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSCDVSYKVTEPGEYRVGLKFNDRHIPD 205
Query: 1144 SPFKATIQP 1152
SPFK I P
Sbjct: 204 SPFKVYISP 178
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Frame = -1
Query: 1478 LQVAVLGPTGVAEPVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVLPS 1537
L V P+ V E E+++ DG ++VH+ P G +TV+V+Y++ +P SPF+ V P
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1538 HDASK--VRASGPGLNASGIPASLPVEFTIDARDAGQGLLTVQILDPEGKPKKANI--RD 1593
D+ V+A G GL + P EF + R+AG G L + + EG P KA+I +D
Sbjct: 459 RDSGSHLVKAGGSGLERGVV--GEPAEFNVWTREAGGGSLAISV---EG-PSKADIEFKD 298
Query: 1594 NGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALP-TGDASKCLV 1642
DG+ VSY G Y + +K+ IP SPF+++ P GDA K V
Sbjct: 297 RKDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEV 148
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Frame = -1
Query: 1289 VTARVLNPSGAKTDTYVTDNGDGTYRVQYTAYEEGVHLVEVLYDEVAVPKSPFR--VGVT 1346
+ A V +PS D + + DG Y V + E GVH V V Y E+ +P SPF+ VG
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1347 EGCDPTRVRAFGPGLEGGLVNKANRFTVXXXXXXXXXXXXXXXXPSEAKMSCKDNKDGSC 1406
V+A G GLE G+V + F V PS+A + KD KDGSC
Sbjct: 459 RDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSC 280
Query: 1407 TVEYIPFTPGDYDVNITFGGQPIPGSPFR 1435
V Y PG+Y V + F + IP SPF+
Sbjct: 279 DVSYKVTEPGEYRVGLKFNDRHIPDSPFK 193
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%)
Frame = -1
Query: 1575 LTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPT 1634
L + P + A I++ DG Y+V ++P G +T++++Y IP SPF+ P
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1635 GDASKCLVTVSIGGHGLGACLGPRIQIGEETVITVDAKAAGKGKVTCTVSTPDGAELDVD 1694
D+ LV GG GL R +GE V + AG G + +V P A D++
Sbjct: 459 RDSGSHLVKA--GGSGL-----ERGVVGEPAEFNVWTREAGGGSLAISVEGPSKA--DIE 307
Query: 1695 VVENHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHV 1733
+ DG+ D+ Y EPG+Y + ++F HIP+SPF V
Sbjct: 306 FKDRKDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKV 190
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 3/191 (1%)
Frame = -1
Query: 830 FTVKYTPPGAGHYTIMVLFANQEIPASPFHIKVDPSHDASK--VKAEGPGLSRTGVEVGK 887
++V + P G +T+ V ++ IP SPF V P D+ VKA G GL R GV VG+
Sbjct: 567 YSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVKAGGSGLER-GV-VGE 394
Query: 888 PTHFTVLTKGAGKAKLDVHFAGAAKGEAVRDFEIIDNHDYSYTVKYTAVQQGNMAVTVTY 947
P F V T+ AG L + G +K D E D D S V Y + G V + +
Sbjct: 393 PAEFNVWTREAGGGSLAISVEGPSKA----DIEFKDRKDGSCDVSYKVTEPGEYRVGLKF 226
Query: 948 GGDPVPKSPFVVNVAPPL-DLSKVKVQGLNSKVAVGQEQAFSVNTRGAGGQGQLDVRMTS 1006
+P SPF V ++P D K++VQ + + + + R G +G+LD ++ +
Sbjct: 225 NDRHIPDSPFKVYISPDAGDAHKLEVQQF-PQGNIQADAPYQFMVRKNGAKGELDAKIVA 49
Query: 1007 PSRRPIPCKLE 1017
PS C ++
Sbjct: 48 PSGTDDDCFIQ 16
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Frame = -1
Query: 315 IEDPEGHTEEAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAGQNIERSPFEVNVG-MAL 373
+ P TE+A++ +D Y+V +VPK G+H V+V ++ +I SPF+ VG +
Sbjct: 627 VTSPSNVTEDAEI--QEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRD 454
Query: 374 GDANKVSARGPGLEPVGNVANKPTYFDIYTAGAGTGDVAVVIVDPQGRRDTVEVALEDKG 433
++ V A G GLE V +P F+++T AG G +A+ + P ++ +D+
Sbjct: 453 SGSHLVKAGGSGLER--GVVGEPAEFNVWTREAGGGSLAISVEGPS----KADIEFKDRK 292
Query: 434 DNTFRCTYRPVMEGPHTVHVAFAGAPITRSPFPVHVAEACNPNACRASGRGLQ--PKG-V 490
D + +Y+ G + V + F I SPF V+++ P+A A +Q P+G +
Sbjct: 291 DGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYIS----PDAGDAHKLEVQQFPQGNI 124
Query: 491 RVKEVADFKVFTKGAGSGELKVTVKGPKGTEE 522
+ F V GA GEL + P GT++
Sbjct: 123 QADAPYQFMVRKNGA-KGELDAKIVAPSGTDD 31
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 5/186 (2%)
Frame = -1
Query: 724 DGTFRCSYVPTKPIKHTIIVSWGGVNVPKSPFRVNVG----EGSHPERVKVYGPGVEKTG 779
DG + +VP + HT+ V + +++P SPF+ VG GSH VK G G+E+
Sbjct: 576 DGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSH--LVKAGGSGLERGV 403
Query: 780 LKANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPVEAXXXXXXXXXXXXTFTVKYTPPGA 839
+ EP F V EAG G ++I ++ GP +A + K T P
Sbjct: 402 V--GEPAEFNVWTREAGGGSLAISVE------GPSKADIEFKDRKDGSCDVSYKVTEP-- 253
Query: 840 GHYTIMVLFANQEIPASPFHIKVDP-SHDASKVKAEGPGLSRTGVEVGKPTHFTVLTKGA 898
G Y + + F ++ IP SPF + + P + DA K++ + + ++ P F V GA
Sbjct: 252 GEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQ--QFPQGNIQADAPYQFMVRKNGA 79
Query: 899 GKAKLD 904
K +LD
Sbjct: 78 -KGELD 64
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Frame = -1
Query: 1893 LSLAVEGPSKA--EITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI--- 1947
L+ V PS + ++ +DG +V ++P G +++ VR+ + HIPGSPF +
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1948 --TGDDSMRT--SQLN---VGTSTDVSLKITEGDLSQLTASIRAPSGNEEPCLLKRLPNR 2000
+G ++ S L VG + ++ E L S+ PS + K +
Sbjct: 459 RDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKAD--IEFKDRKDG 286
Query: 2001 HIGISFTPKEVGEHVVSVRKSGKHVTNSPFKILVGPSEIGDASKVRVWGKGLSEGQTFQV 2060
+S+ E GE+ V ++ + +H+ +SPFK+ + P + GDA K+ V Q
Sbjct: 285 SCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISP-DAGDAHKLEVQQFPQGNIQADAP 109
Query: 2061 AEFIVDTRNAGYGGLGLSIEGPSKVDINC 2089
+F+V +N G L I PS D +C
Sbjct: 108 YQFMV-RKNGAKGELDAKIVAPSGTDDDC 25
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Frame = -1
Query: 1188 ELTIEILSDAGVKAEVLIQNNADGTYHITYSPAFPGTYTITIKYGGHPIPKFPTRVHVQP 1247
+L + S + V + IQ DG Y + + P G +T++++Y IP P + V P
Sbjct: 642 DLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGP 463
Query: 1248 AVDTSG--IKVSGPGVEPHGVLREVTTEFTVDARSLTATGGNHVTARVLNPSGAKTDTYV 1305
D+ +K G G+E GV+ E EF V R GG + V PS K D
Sbjct: 462 LRDSGSHLVKAGGSGLE-RGVVGE-PAEFNVWTRE---AGGGSLAISVEGPS--KADIEF 304
Query: 1306 TDNGDGTYRVQYTAYEEGVHLVEVLYDEVAVPKSPFRVGVT 1346
D DG+ V Y E G + V + +++ +P SPF+V ++
Sbjct: 303 KDRKDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYIS 181
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 3/190 (1%)
Frame = -1
Query: 2539 LSVTIDGPSKVQLDC--RECPEG-HVVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTG 2595
L+ + PS V D +E +G + V + P G + ++++Y HI GSPF+ V
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYS-EMHIPGSPFQFTVGP 463
Query: 2596 PRLSGGHSLHETSTVLVETVTKXXXXXXXXXXXIPKFSSDASKVVTRGPGLSQAFVGQKN 2655
R SG H V G GL + VG+
Sbjct: 462 LRDSGSH-----------------------------------LVKAGGSGLERGVVGEPA 388
Query: 2656 SFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDES 2715
F V +AG + + V GP ++ K + +V+Y V E G+Y + +K+ D
Sbjct: 387 EFNVWTREAGGGSLAISVEGPSKA--DIEFKDRKDGSCDVSYKVTEPGEYRVGLKFNDRH 214
Query: 2716 VPGSPFKVNV 2725
+P SPFKV +
Sbjct: 213 IPDSPFKVYI 184
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Frame = -1
Query: 624 DGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKVKAFGPGLEPTGC 683
DG V + P E G + V V + I SPF + P D VKA G GLE
Sbjct: 576 DGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLR-DSGSHLVKAGGSGLERG-- 406
Query: 684 IVDRPAEFTIDARAAGKGDLKLYAQDADGCPIDIKVIPNGDGTFRCSYVPTKPIKHTIIV 743
+V PAEF + R AG G L + + I+ K DG+ SY T+P ++ + +
Sbjct: 405 VVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFK--DRKDGSCDVSYKVTEPGEYRVGL 232
Query: 744 SWGGVNVPKSPFRVNV---GEGSHPERVKVYGPGVEKTGLKANEPTYFTV 790
+ ++P SPF+V + +H V+ + G ++A+ P F V
Sbjct: 231 KFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQG----NIQADAPYQFMV 94
>29446
Length = 1445
Score = 204 bits (518), Expect = 5e-52, Method: Composition-based stats.
Identities = 100/154 (64%), Positives = 121/154 (78%), Gaps = 2/154 (1%)
Frame = +3
Query: 24 STEKDLAEDAPWKKIQQNTFTRWCNEHLKCVGKRLTDLQRDLSDGLRLIALLEVLSQKRM 83
STE++LAEDA WK IQ+NTFTRW NEHL+ V K + DL+ D SDGLRL+AL+EVLS K+
Sbjct: 957 STERELAEDAQWKIIQKNTFTRWANEHLRTVNKAIADLESDFSDGLRLVALIEVLSGKK- 1133
Query: 84 YRKFHPRPNFRQMKLENVSVALEFLE-REHIKLVSIDSKAIVDGNLKLILGLIWTLILHY 142
++ + RPNFR KLENV++ L+FLE E I++V+IDS IVD LKLILGLIWTLILHY
Sbjct: 1134 FKHVNKRPNFRTQKLENVTLTLKFLEDDEGIRIVNIDSTDIVDKKLKLILGLIWTLILHY 1313
Query: 143 SISMPMWEDEDDEDAR-KQTPKQRLLGWIQNKVP 175
SISMPMWE E+ + TPKQRLL WIQ+KVP
Sbjct: 1314 SISMPMWEGEEPTPSEGGPTPKQRLLNWIQSKVP 1415
>19277
Length = 511
Score = 180 bits (456), Expect(2) = 4e-51, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 105/132 (79%), Gaps = 2/132 (1%)
Frame = +2
Query: 2034 VGPSEIGDASKVRVWGKGLSEGQTFQVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDME 2093
VG SE+G+ASKV+V G GL+EG +V EF+VDTR AGYGG+ LSIEGPSK DI C D E
Sbjct: 77 VGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNE 256
Query: 2094 DGTCKVTYCPTEPGTYIINIKFADKHVPGSPFTVKVTGE--GRMKESITRRRQAPSIATI 2151
DGTC+VTY PTEPGTYIINIKFAD+HVPGSP++VK+ GE ++ E ITR + A + +
Sbjct: 257 DGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTKITERITRHKAAADVTHV 436
Query: 2152 GSTCDLNLKIPG 2163
GS C+L+LKIPG
Sbjct: 437 GSQCELSLKIPG 472
Score = 42.4 bits (98), Expect(2) = 4e-51, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +1
Query: 2008 PKEVGEHVVSVRKSGKHVTNSPFKILVG 2035
P+E GEH+V+V ++GKH+ NSPFKI G
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKICRG 84
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 81/123 (65%), Gaps = 11/123 (8%)
Frame = +2
Query: 1859 NSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVS 1918
N+ V G GL+ GM N+ F + T++AG GG+SL++EGPSKA+I C DN+DGTC V+
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRVT 277
Query: 1919 YLPTAPGDYSIIVRFDDKHIPGSPFTAKITGDDSMRTSQ-----------LNVGTSTDVS 1967
Y PT PG Y I ++F D+H+PGSP++ KI G+ S + ++ +VG+ ++S
Sbjct: 278 YKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTKITERITRHKAAADVTHVGSQCELS 457
Query: 1968 LKI 1970
LKI
Sbjct: 458 LKI 466
Score = 95.9 bits (237), Expect(2) = 4e-22, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 65/97 (67%)
Frame = +2
Query: 2306 TVGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPSKAEIAFEDR 2365
+VG G A KV+ G GL G+A EF + TREAG GG+S+++EGPSKA+I D
Sbjct: 74 SVGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDN 253
Query: 2366 KDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPV 2402
+DG+C V+Y EPG Y ++IKF D+H+P SP+ V +
Sbjct: 254 EDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 29.6 bits (65), Expect(2) = 4e-22, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 2281 PQEMGPHTVTVKYRGQHVPGSPFQFTVG 2308
P+E G H V V G+H+ SPF+ G
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKICRG 84
Score = 76.3 bits (186), Expect(2) = 7e-18, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Frame = +2
Query: 2500 QSQAGDPGLVSAYGPGLEGGTTGVSSEFIVNTQNAGSGALSVTIDGPSKVQLDCRECPEG 2559
+S+ G+ V G GL G +EF+V+T+ AG G +S++I+GPSK ++C + +G
Sbjct: 83 ESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDG 262
Query: 2560 HV-VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTGPRLSGGHSLHETSTVLVETVTK 2617
VTY P PG Y+I IK+ QH+ GSP+ K+ G E ST + E +T+
Sbjct: 263 TCRVTYKPTEPGTYIINIKF-ADQHVPGSPYSVKIGG----------EPSTKITERITR 406
Score = 35.0 bits (79), Expect(2) = 7e-18, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 2471 PHENGVHSIDVKFNGAHIPGSPFKIRVGEQS 2501
P E G H ++V NG HI SPFKI GE++
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKICRGERT 93
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 52/89 (58%)
Frame = +2
Query: 1062 DPSKVCAYGPGLKGGLVGTPAPFSIDTKXXXXXXXXXXVEGPCEAKIECQDNGDGSCAVS 1121
+ SKV G GL G+ F +DT+ +EGP +A IEC DN DG+C V+
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRVT 277
Query: 1122 YLPTEPGEYTINILFAEAHIPGSPFKATI 1150
Y PTEPG Y INI FA+ H+PGSP+ I
Sbjct: 278 YKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 73.9 bits (180), Expect(2) = 4e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +2
Query: 1337 PKSPFR-VGVTEGCDPTRVRAFGPGLEGGLVNKANRFTVXXXXXXXXXXXXXXXXPSEAK 1395
P +P R VG +E + ++V+ G GL G+ N+ N F V PS+A
Sbjct: 56 PTAPSRSVGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKAD 235
Query: 1396 MSCKDNKDGSCTVEYIPFTPGDYDVNITFGGQPIPGSPF 1434
+ C DN+DG+C V Y P PG Y +NI F Q +PGSP+
Sbjct: 236 IECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPY 352
Score = 21.2 bits (43), Expect(2) = 4e-13, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 1321 EEGVHLVEVLYDEVAVPKSPFRV 1343
E G HLV V + + SPF++
Sbjct: 7 ETGEHLVNVYRNGKHIANSPFKI 75
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%)
Frame = +2
Query: 572 AQKVRAWGPGLETGQVGKSADFVVEAIGTEVGTLGFSIEGPSQAKIECDDKGDGSCDVRY 631
A KV+ G GL G + +FVV+ G + SIEGPS+A IEC D DG+C V Y
Sbjct: 101 ASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRVTY 280
Query: 632 WPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKV 671
PTEPG Y +++ D+ + SP+ I P +++
Sbjct: 281 KPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTKITERI 400
Score = 66.2 bits (160), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%)
Frame = +2
Query: 1155 DPSKVRASGPGLERGKAGEAATFTVDCSEAGEAELTIEILSDAGVKAEVLIQNNADGTYH 1214
+ SKV+ SG GL G A E F VD EAG +++ I + KA++ +N DGT
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSI--EGPSKADIECHDNEDGTCR 271
Query: 1215 ITYSPAFPGTYTITIKYGGHPIPKFPTRVHV 1245
+TY P PGTY I IK+ +P P V +
Sbjct: 272 VTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 26.6 bits (57), Expect(2) = 2e-12, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 1124 PTEPGEYTINILFAEAHIPGSPFK 1147
P E GE+ +N+ HI SPFK
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFK 72
Score = 60.8 bits (146), Expect(2) = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +2
Query: 1450 SGPGLGTGVRARVPQTFTVDCSQAGRAPLQVAVLGPTGVAEPVEVRDNGDGTHTVHYTPA 1509
SG GL G+ V + F VD +AG + +++ GP+ +E DN DGT V Y P
Sbjct: 119 SGDGLTEGMANEVNE-FVVDTREAGYGGMSLSIEGPS--KADIECHDNEDGTCRVTYKPT 289
Query: 1510 TDGPYTVAVKYADQEVPRSPFKIKV 1534
G Y + +K+ADQ VP SP+ +K+
Sbjct: 290 EPGTYIINIKFADQHVPGSPYSVKI 364
Score = 21.2 bits (43), Expect(2) = 3e-09, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 1412 PFTPGDYDVNITFGGQPIPGSPFR 1435
P G++ VN+ G+ I SPF+
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFK 72
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%)
Frame = +2
Query: 2635 DASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYN 2694
+ASKV G GL++ + N F VD +AG M + + GP E + G
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDG--TCR 271
Query: 2695 VTYTVKEKGDYILIVKWGDESVPGSPFKVNV 2725
VTY E G YI+ +K+ D+ VPGSP+ V +
Sbjct: 272 VTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +2
Query: 1539 DASKVRASGPGLNASGIPASLPVEFTIDARDAGQGLLTVQILDPEGKPKKANI--RDNGD 1596
+ASKV+ SG GL A+ EF +D R+AG G +++ I EG P KA+I DN D
Sbjct: 98 NASKVKVSGDGLTEG--MANEVNEFVVDTREAGYGGMSLSI---EG-PSKADIECHDNED 259
Query: 1597 GTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRI 1629
GT V+Y P G Y I IK+ +P SP+ +
Sbjct: 260 GTCRVTYKPTEPGTYIINIKFADQHVPGSPYSV 358
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%)
Frame = +2
Query: 1635 GDASKCLVTVSIGGHGLGACLGPRIQIGEETVITVDAKAAGKGKVTCTVSTPDGAELDVD 1694
G+ASK V + G GL + + VD + AG G ++ ++ P A D++
Sbjct: 95 GNASK----VKVSGDGLTEGMANEVN-----EFVVDTREAGYGGMSLSIEGPSKA--DIE 241
Query: 1695 VVENHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHV 1733
+N DGT + Y EPG Y+I I+F +H+P SP+ V
Sbjct: 242 CHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSV 358
Score = 52.0 bits (123), Expect(2) = 5e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%)
Frame = +2
Query: 670 KVKAFGPGLEPTGCIVDRPAEFTIDARAAGKGDLKLYAQDADGCPIDIKVIPNGDGTFRC 729
KVK G GL T + + EF +D R AG G + L + DI+ N DGT R
Sbjct: 107 KVKVSGDGL--TEGMANEVNEFVVDTREAGYGGMSLSIEGPS--KADIECHDNEDGTCRV 274
Query: 730 SYVPTKPIKHTIIVSWGGVNVPKSPFRVNVG 760
+Y PT+P + I + + +VP SP+ V +G
Sbjct: 275 TYKPTEPGTYIINIKFADQHVPGSPYSVKIG 367
Score = 22.3 bits (46), Expect(2) = 5e-07, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 633 PTEPGEYAVHVICDDEDIRDSPF 655
P E GE+ V+V + + I +SPF
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPF 69
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%)
Frame = +2
Query: 453 VAFAGAPITRSPFPVHVAEACNPNACRASGRGLQPKGVRVKEVADFKVFTKGAGSGELKV 512
+A A T V +E N + + SG GL +G+ EV +F V T+ AG G + +
Sbjct: 35 IAMASTSPTAPSRSVGESELGNASKVKVSGDGLT-EGM-ANEVNEFVVDTREAGYGGMSL 208
Query: 513 TVKGPKGTEEPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYAIPRSPFEVQVSPE 569
+++GP + ++ + DG Y P PG Y++ I + +P SP+ V++ E
Sbjct: 209 SIEGPSKAD--IECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGE 373
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +2
Query: 751 PKSPFRVNVGEGS--HPERVKVYGPGVEKTGLKANEPTYFTVDCSEAGQGDVSIGIKCAP 808
P +P R +VGE + +VKV G G+ T ANE F VD EAG G +S+ I+
Sbjct: 56 PTAPSR-SVGESELGNASKVKVSGDGL--TEGMANEVNEFVVDTREAGYGGMSLSIE--- 217
Query: 809 GVVGPVEAXXXXXXXXXXXXTFTVKYTPPGAGHYTIMVLFANQEIPASPFHIKV 862
GP +A T K T PG Y I + FA+Q +P SP+ +K+
Sbjct: 218 ---GPSKADIECHDNEDGTCRVTYKPTEPGT--YIINIKFADQHVPGSPYSVKI 364
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%)
Frame = +2
Query: 1250 DTSGIKVSGPGVEPHGVLREVTTEFTVDARSLTATGGNHVTARVLNPSGAKTDTYVTDNG 1309
+ S +KVSG G+ G+ EV EF VD R G ++ + PS K D DN
Sbjct: 98 NASKVKVSGDGL-TEGMANEVN-EFVVDTRE---AGYGGMSLSIEGPS--KADIECHDNE 256
Query: 1310 DGTYRVQYTAYEEGVHLVEVLYDEVAVPKSPFRVGV 1345
DGT RV Y E G +++ + + + VP SP+ V +
Sbjct: 257 DGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Frame = +2
Query: 373 LGDANKVSARGPGLEPVGNVANKPTYFDIYTAGAGTGDVAVVIVDPQGRRDTVEVALEDK 432
LG+A+KV G GL +AN+ F + T AG G +++ I P ++ D
Sbjct: 92 LGNASKVKVSGDGLTE--GMANEVNEFVVDTREAGYGGMSLSIEGPS----KADIECHDN 253
Query: 433 GDNTFRCTYRPVMEGPHTVHVAFAGAPITRSPFPVHV 469
D T R TY+P G + +++ FA + SP+ V +
Sbjct: 254 EDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 966 DLSKVKVQGLNSKVAVGQE-QAFSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGGGAEA 1024
+ SKVKV G + E F V+TR AG G + + + PS+ I C G
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAG-YGGMSLSIEGPSKADIECHDNEDGTCR- 271
Query: 1025 QAVRYMPPEEGPYKVDITYDGHPVPGSPFAVE 1056
V Y P E G Y ++I + VPGSP++V+
Sbjct: 272 --VTYKPTEPGTYIINIKFADQHVPGSPYSVK 361
Score = 40.4 bits (93), Expect(2) = 6e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +2
Query: 2408 DARRLTVTSLQETGLKVNQPASFAVQLNGA-RGVIDARVHTPSGAVEECYVSELDSDKHT 2466
+A ++ V+ T N+ F V A G + + PS A EC+ D++ T
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECH----DNEDGT 265
Query: 2467 IR--FIPHENGVHSIDVKFNGAHIPGSPFKIRVG 2498
R + P E G + I++KF H+PGSP+ +++G
Sbjct: 266 CRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIG 367
Score = 23.5 bits (49), Expect(2) = 6e-04, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 2377 QEPGDYEVSIKFNDEHIPDSPFVV 2400
+E G++ V++ N +HI +SPF +
Sbjct: 4 RETGEHLVNVYRNGKHIANSPFKI 75
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 1817 DNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYV 1855
DN+DGT V Y PTE G + + IK+ H+PGSP +
Sbjct: 248 DNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 2245 EASSQDMTAQVTSPSGKTEAAEIVEGEDSAYSVRFVPQEMGPHTVTVKYRGQHVPGSPFQ 2304
EA M+ + PS E + ED V + P E G + + +K+ QHVPGSP+
Sbjct: 182 EAGYGGMSLSIEGPS--KADIECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYS 355
Query: 2305 FTVG 2308
+G
Sbjct: 356 VKIG 367
>21436
Length = 546
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 110/172 (63%)
Frame = -1
Query: 722 NGDGTFRCSYVPTKPIKHTIIVSWGGVNVPKSPFRVNVGEGSHPERVKVYGPGVEKTGLK 781
N DGT+ C Y+P +P+KHT+ V++GGV VP SPFRV+V E S P +VK+ GPGV G+K
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTN-GIK 370
Query: 782 ANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPVEAXXXXXXXXXXXXTFTVKYTPPGAGH 841
PTYFTVDC +AG GDV++G+ G+ PV+ TFTV+Y P G
Sbjct: 369 TMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKT------TGNQDGTFTVEYEPKLPGT 208
Query: 842 YTIMVLFANQEIPASPFHIKVDPSHDASKVKAEGPGLSRTGVEVGKPTHFTV 893
YT+MV FA+ E+P+SP +KV+P+ D S ++ +G SR +E P+ F V
Sbjct: 207 YTVMVYFADVEVPSSPVKVKVEPNIDVSSIRVDGLD-SRVFIE--APSEFVV 61
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 96/185 (51%)
Frame = -1
Query: 1401 NKDGSCTVEYIPFTPGDYDVNITFGGQPIPGSPFRXXXXXXXXXXXXXCSGPGLGTGVRA 1460
N+DG+ Y+P P + V++ FGG +P SPFR SGPG+ G++
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1461 RVPQTFTVDCSQAGRAPLQVAVLGPTGVAEPVEVRDNGDGTHTVHYTPATDGPYTVAVKY 1520
P FTVDC QAG + V + G+ PV+ N DGT TV Y P G YTV V +
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1521 ADQEVPRSPFKIKVLPSHDASKVRASGPGLNASGIPASLPVEFTIDARDAGQGLLTVQIL 1580
AD EVP SP K+KV P+ D S +R GL+ S + P EF +DA +L
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIRVD--GLD-SRVFIEAPSEFVVDA----------SVL 46
Query: 1581 DPEGK 1585
DP+G+
Sbjct: 45 DPKGQ 31
Score = 120 bits (300), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 1/185 (0%)
Frame = -1
Query: 1113 NGDGSCAVSYLPTEPGEYTINILFAEAHIPGSPFKATIQPVFDPSKVRASGPGLERG-KA 1171
N DG+ A Y+P P ++T+++ F +P SPF+ + DPSKV+ SGPG+ G K
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1172 GEAATFTVDCSEAGEAELTIEILSDAGVKAEVLIQNNADGTYHITYSPAFPGTYTITIKY 1231
FTVDC +AG ++ + + G+ V N DGT+ + Y P PGTYT+ + +
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1232 GGHPIPKFPTRVHVQPAVDTSGIKVSGPGVEPHGVLREVTTEFTVDARSLTATGGNHVTA 1291
+P P +V V+P +D S I+V G V E +EF VDA L G V A
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIRVDGLDSR---VFIEAPSEFVVDASVLDPKGQGEVEA 16
Query: 1292 RVLNP 1296
+ P
Sbjct: 15 ILTTP 1
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Frame = -1
Query: 1497 NGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVLPSHDASKVRASGPGLNASGIP 1556
N DGT+ Y P +TV+V + VP SPF++ V D SKV+ SGPG+ +GI
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVT-NGIK 370
Query: 1557 ASLPVEFTIDARDAGQGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIK 1616
P FT+D + AG G + V + D G N DGT+TV Y P + G YT+ +
Sbjct: 369 TMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVY 190
Query: 1617 YGGDEIPYSPFRIHALPTGDASKCLVTVSIGGHGLGACLGPRIQIGEETVITVDAKA--- 1673
+ E+P SP ++ P D S SI GL + R+ I + VDA
Sbjct: 189 FADVEVPSSPVKVKVEPNIDVS------SIRVDGLDS----RVFIEAPSEFVVDASVLDP 40
Query: 1674 AGKGKVTCTVSTP 1686
G+G+V ++TP
Sbjct: 39 KGQGEVEAILTTP 1
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 74/146 (50%)
Frame = -1
Query: 434 DNTFRCTYRPVMEGPHTVHVAFAGAPITRSPFPVHVAEACNPNACRASGRGLQPKGVRVK 493
D T+ C Y P+ HTV V F G + SPF VHVAE +P+ + SG G+ G++
Sbjct: 540 DGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVT-NGIKTM 364
Query: 494 EVADFKVFTKGAGSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYPVVPGKYVVTITWG 553
F V K AG G++ V + +G + PVK DG F EY P +PG Y V + +
Sbjct: 363 SPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFA 184
Query: 554 GYAIPRSPFEVQVSPEAGAQKVRAWG 579
+P SP +V+V P +R G
Sbjct: 183 DVEVPSSPVKVKVEPNIDVSSIRVDG 106
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 3/182 (1%)
Frame = -1
Query: 829 TFTVKYTPPGAGHYTIMVLFANQEIPASPFHIKVDPSHDASKVKAEGPGLSRTGVEVGKP 888
T+ +Y P +T+ V F +P SPF + V D SKVK GPG++ G++ P
Sbjct: 534 TYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTN-GIKTMSP 358
Query: 889 THFTVLTKGAGKAKLDVHFAGAAKGEAVR-DFEIIDNHDYSYTVKYTAVQQGNMAVTVTY 947
T+FTV K AG + V G G + + N D ++TV+Y G V V +
Sbjct: 357 TYFTVDCKQAGPGDVAV---GLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 948 GGDPVPKSPFVVNVAPPLDLSKVKVQGLNSKVAVGQEQAFSVNTR--GAGGQGQLDVRMT 1005
VP SP V V P +D+S ++V GL+S+V + F V+ GQG+++ +T
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIRVDGLDSRVFIEAPSEFVVDASVLDPKGQGEVEAILT 7
Query: 1006 SP 1007
+P
Sbjct: 6 TP 1
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 75/151 (49%)
Frame = -1
Query: 1208 NADGTYHITYSPAFPGTYTITIKYGGHPIPKFPTRVHVQPAVDTSGIKVSGPGVEPHGVL 1267
N DGTY Y P P +T+++ +GG +P P RVHV D S +K+SGPGV +G+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVT-NGIK 370
Query: 1268 REVTTEFTVDARSLTATGGNHVTARVLNPSGAKTDTYVTDNGDGTYRVQYTAYEEGVHLV 1327
T FTVD + G V + + G T N DGT+ V+Y G + V
Sbjct: 369 TMSPTYFTVDCKQ---AGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTV 199
Query: 1328 EVLYDEVAVPKSPFRVGVTEGCDPTRVRAFG 1358
V + +V VP SP +V V D + +R G
Sbjct: 198 MVYFADVEVPSSPVKVKVEPNIDVSSIRVDG 106
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%)
Frame = -1
Query: 1594 NGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPTGDASKCLVTVSIGGHGLGA 1653
N DGTY Y+P ++T+++ +GG +P SPFR+H D SK V I G G+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSK----VKISGPGVTN 379
Query: 1654 CLGPRIQIGEETVITVDAKAAGKGKVTCTVSTPDGAELDVDVVENHDGTFDIYYTAPEPG 1713
I+ T TVD K AG G V ++ G ++ V N DGTF + Y PG
Sbjct: 378 G----IKTMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPG 211
Query: 1714 KYVITIRFGGEHIPNSPFHV 1733
Y + + F +P+SP V
Sbjct: 210 TYTVMVYFADVEVPSSPVKV 151
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
Frame = -1
Query: 624 DGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKVKAFGPGLEPTGC 683
DG+ RY P P ++ V V + +SPF H+ P D P KVK GPG+ G
Sbjct: 540 DGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVA-EPSD--PSKVKISGPGVT-NGI 373
Query: 684 IVDRPAEFTIDARAAGKGDLKLYAQDADGCPIDIKVIPNGDGTFRCSYVPTKPIKHTIIV 743
P FT+D + AG GD+ + D G + +K N DGTF Y P P +T++V
Sbjct: 372 KTMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMV 193
Query: 744 SWGGVNVPKSPFRVNVGEGSHPERVKVYGPGVEKTGLKANEPTYFTVDCS---EAGQGDV 800
+ V VP SP +V V ++V G + + P+ F VD S GQG+V
Sbjct: 192 YFADVEVPSSPVKVKVEPNIDVSSIRVDG---LDSRVFIEAPSEFVVDASVLDPKGQGEV 22
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Frame = -1
Query: 1026 AVRYMPPEEGPYKVDITYDGHPVPGSPFAVEGVLPPDPSKVCAYGPGLKGGL-VGTPAPF 1084
A RYMP + V + + G VP SPF V P DPSKV GPG+ G+ +P F
Sbjct: 528 ACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKTMSPTYF 349
Query: 1085 SIDTKXXXXXXXXXXVEGP--CEAKIECQDNGDGSCAVSYLPTEPGEYTINILFAEAHIP 1142
++D K + + ++ N DG+ V Y P PG YT+ + FA+ +P
Sbjct: 348 TVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFADVEVP 169
Query: 1143 GSPFKATIQPVFDPSKVRASGPGLERGKAGEA-ATFTVDCS 1182
SP K ++P D S +R GL+ EA + F VD S
Sbjct: 168 SSPVKVKVEPNIDVSSIRVD--GLDSRVFIEAPSEFVVDAS 52
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Frame = -1
Query: 1818 NKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYV-DAINSRHVSAYGPGLSHGM-V 1875
N+DGT RY P H + + + G +P SP + +V + + V GPG+++G+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1876 NKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKD--NKDGTCTVSYLPTAPGDYSIIVRF 1933
P FT+ K AG G +++ + ++ K N+DGT TV Y P PG Y+++V F
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1934 DDKHIPGSPFTAKI 1947
D +P SP K+
Sbjct: 186 ADVEVPSSPVKVKV 145
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 84/191 (43%)
Frame = -1
Query: 332 DKDRTYAVSYVPKVAGLHKVTVLFAGQNIERSPFEVNVGMALGDANKVSARGPGLEPVGN 391
++D TYA Y+P H V+V F G + SPF V+V D +KV GPG+ G
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEP-SDPSKVKISGPGVTN-GI 373
Query: 392 VANKPTYFDIYTAGAGTGDVAVVIVDPQGRRDTVEVALEDKGDNTFRCTYRPVMEGPHTV 451
PTYF + AG GDVAV + D GR V V D TF Y P + G +TV
Sbjct: 372 KTMSPTYFTVDCKQAGPGDVAVGLTD--GRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTV 199
Query: 452 HVAFAGAPITRSPFPVHVAEACNPNACRASGRGLQPKGVRVKEVADFKVFTKGAGSGELK 511
V FA + SP V V + ++ R G D +VF + +
Sbjct: 198 MVYFADVEVPSSPVKVKVEPNIDVSSIRVDG-------------LDSRVFIEAPSEFVVD 58
Query: 512 VTVKGPKGTEE 522
+V PKG E
Sbjct: 57 ASVLDPKGQGE 25
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Frame = -1
Query: 2006 FTPKEVGEHVVSVRKSGKHVTNSPFKILVGPSEIGDASKVRVWGKGLSEG-QTFQVAEFI 2064
+ P +H VSV G V NSPF++ V +E D SKV++ G G++ G +T F
Sbjct: 519 YMPLRPVKHTVSVNFGGVAVPNSPFRVHV--AEPSDPSKVKISGPGVTNGIKTMSPTYFT 346
Query: 2065 VDTRNAGYGGLGLSIEGPSKVDINCEDM--EDGTCKVTYCPTEPGTYIINIKFADKHVPG 2122
VD + AG G + + + +D+ + +DGT V Y P PGTY + + FAD VP
Sbjct: 345 VDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFADVEVPS 166
Query: 2123 SPFTVKV 2129
SP VKV
Sbjct: 165 SPVKVKV 145
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 70/167 (41%), Gaps = 3/167 (1%)
Frame = -1
Query: 1308 NGDGTYRVQYTAYEEGVHLVEVLYDEVAVPKSPFRVGVTEGCDPTRVRAFGPGLEGGLVN 1367
N DGTY +Y H V V + VAVP SPFRV V E DP++V+ GPG+ G+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1368 KA-NRFTVXXXXXXXXXXXXXXXXPSEAKMSCKD--NKDGSCTVEYIPFTPGDYDVNITF 1424
+ FTV + K N+DG+ TVEY P PG Y V + F
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1425 GGQPIPGSPFRXXXXXXXXXXXXXCSGPGLGTGVRARVPQTFTVDCS 1471
+P SP + GL + V P F VD S
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIRVD--GLDSRVFIEAPSEFVVDAS 52
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 7/190 (3%)
Frame = -1
Query: 2271 EDSAYSVRFVPQEMGPHTVTVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLERGVA 2330
D Y+ R++P HTV+V + G VP SPF+ V + KV+ G G+ G+
Sbjct: 543 RDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSD--PSKVKISGPGVTNGIK 370
Query: 2331 GV-PAEFSIWTREAGAGGLSIAVEGPSKAEIAFED--RKDGSCGVSYVVQEPGDYEVSIK 2387
+ P F++ ++AG G +++ + ++ + +DG+ V Y + PG Y V +
Sbjct: 369 TMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVY 190
Query: 2388 FNDEHIPDSPFVVPVASLSDDARRLTVTSLQETGLK----VNQPASFAVQLNGARGVIDA 2443
F D +P SP V V + V+S++ GL + P+ F V+DA
Sbjct: 189 FADVEVPSSPVKVKVEP------NIDVSSIRVDGLDSRVFIEAPSEF---------VVDA 55
Query: 2444 RVHTPSGAVE 2453
V P G E
Sbjct: 54 SVLDPKGQGE 25
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = -1
Query: 924 NHDYSYTVKYTAVQQGNMAVTVTYGGDPVPKSPFVVNVAPPLDLSKVKVQ--GLNSKVAV 981
N D +Y +Y ++ V+V +GG VP SPF V+VA P D SKVK+ G+ + +
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 982 GQEQAFSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGGGAEAQAVRYMPPEEGPYKVDI 1041
F+V+ + A G G + V +T +P K G V Y P G Y V +
Sbjct: 366 MSPTYFTVDCKQA-GPGDVAVGLTDGRGMDVPVKTT-GNQDGTFTVEYEPKLPGTYTVMV 193
Query: 1042 TYDGHPVPGSPFAVE 1056
+ VP SP V+
Sbjct: 192 YFADVEVPSSPVKVK 148
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 3/165 (1%)
Frame = -1
Query: 2564 YTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTGPRLSGGHSLHETSTVLVETVTKXXXXXX 2623
Y P+ P + +++ +GG + SPF+ V P
Sbjct: 519 YMPLRPVKHTVSVNFGG-VAVPNSPFRVHVAEP--------------------------- 424
Query: 2624 XXXXXIPKFSSDASKVVTRGPGLSQAFVGQKNS-FTVDCSKAGTNMMMVGVHGPKTPCEE 2682
SD SKV GPG++ + FTVDC +AG + VG+ + +
Sbjct: 423 ----------SDPSKVKISGPGVTNGIKTMSPTYFTVDCKQAGPGDVAVGLTDGR--GMD 280
Query: 2683 VYVKHMGNR--VYNVTYTVKEKGDYILIVKWGDESVPGSPFKVNV 2725
V VK GN+ + V Y K G Y ++V + D VP SP KV V
Sbjct: 279 VPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFADVEVPSSPVKVKV 145
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 3/162 (1%)
Frame = -1
Query: 1698 NHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVLACDPLPHVEEPAEMLQMRQPYAP 1757
N DGT+ Y P K+ +++ FGG +PNSPF V HV EP++ +++
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRV-------HVAEPSDPSKVKISGPG 388
Query: 1758 LRPG---TCPTHWATXXXXXXXXXLESMLRPFNLVIPFTVQKGELTGEVRMPSGKTARPN 1814
+ G PT++ P ++ + T +G + +P T
Sbjct: 387 VTNGIKTMSPTYFTVDCKQAG---------PGDVAVGLTDGRG-----MDVPVKTTG--- 259
Query: 1815 ITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVD 1856
N+DGT TV Y P G + + + + +P SP++ V+
Sbjct: 258 ---NQDGTFTVEYEPKLPGTYTVMVYFADVEVPSSPVKVKVE 142
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Frame = -1
Query: 2365 RKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPVASLSDDARRLTVTSLQETGLKV 2424
+DG+ Y+ P + VS+ F +P+SPF V VA SD ++ G+K
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 2425 NQPASFAVQLNGARGVIDARVHTPSGAVEECYVSELDSDK--HTIRFIPHENGVHSIDVK 2482
P F V A G D V G + V + T+ + P G +++ V
Sbjct: 366 MSPTYFTVDCKQA-GPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVY 190
Query: 2483 FNGAHIPGSPFKIRV 2497
F +P SP K++V
Sbjct: 189 FADVEVPSSPVKVKV 145
>27230
Length = 583
Score = 74.7 bits (182), Expect(2) = 1e-25, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 48/81 (59%)
Frame = -1
Query: 1285 GGNHVTARVLNPSGAKTDTYVTDNGDGTYRVQYTAYEEGVHLVEVLYDEVAVPKSPFRVG 1344
G V A + PSG K T V + DGTY V YT EEG ++V Y + +P SPF+V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1345 VTEGCDPTRVRAFGPGLEGGL 1365
G D RVRA+GPGLEGGL
Sbjct: 67 AVAGYDANRVRAYGPGLEGGL 5
Score = 62.8 bits (151), Expect(2) = 1e-25, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = -2
Query: 1200 KAEVLIQNNADGTYHITYSPAFPGTYTITIKYGGHPIPKFPTRVHVQPAV---DTSGIKV 1256
K+++ N DGT ++TY P FPG Y + + +G P+P P + P+ D S I
Sbjct: 513 KSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITA 334
Query: 1257 SGPGVEPHGVLREVTTEFTVDARSL 1281
SG G+ P GV E +EF VDA L
Sbjct: 333 SGYGISPEGVFIEAPSEFVVDASVL 259
Score = 61.6 bits (148), Expect(2) = 2e-17, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = -2
Query: 612 PSQAKIECDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKV 671
P ++KI C + DG+ +V Y P PGEY V V D+ + SPF A I P+ D +
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSI 340
Query: 672 KAFGPGLEPTGCIVDRPAEFTIDAR 696
A G G+ P G ++ P+EF +DA
Sbjct: 339 TASGYGISPEGVFIEAPSEFVVDAS 265
Score = 47.8 bits (112), Expect(2) = 2e-17, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = -1
Query: 699 GKGDLKLYAQDADGCPIDIKVIPNGDGTFRCSYVPTKPIKHTIIVSWGGVNVPKSPFRVN 758
G+G+++ G + V DGT+ Y P + ++ V++ G+ +P SPF+VN
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 759 VGEGSHPERVKVYGPGVE 776
G RV+ YGPG+E
Sbjct: 67 AVAGYDANRVRAYGPGLE 14
Score = 55.8 bits (133), Expect(2) = 7e-17, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = -1
Query: 1474 GRAPLQVAVLGPTGVAEPVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIK 1533
G+ ++ + P+G V + DGT+ V YTP +GP ++ V Y +P SPF++
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1534 VLPSHDASKVRASGPGL 1550
+ +DA++VRA GPGL
Sbjct: 67 AVAGYDANRVRAYGPGL 17
Score = 52.0 bits (123), Expect(2) = 7e-17, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -2
Query: 1391 PSEAKMSCKDNKDGSCTVEYIPFTPGDYDVNITFGGQPIPGSPFRXXXXXXXX---XXXX 1447
P ++K++C + DG+ V YIP PG+Y V ++ G +P+PGSPF
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSI 340
Query: 1448 XCSGPGLG-TGVRARVPQTFTVDCS 1471
SG G+ GV P F VD S
Sbjct: 339 TASGYGISPEGVFIEAPSEFVVDAS 265
Score = 53.1 bits (126), Expect(2) = 7e-16, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = -2
Query: 1103 PCEAKIECQDNGDGSCAVSYLPTEPGEYTINILFAEAHIPGSPFKATIQPV-FDP--SKV 1159
P ++KI C + DG+ V+Y+P PGEY + + + +PGSPF A I P DP S +
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSI 340
Query: 1160 RASGPGLE-RGKAGEAAT-FTVDCS 1182
ASG G+ G EA + F VD S
Sbjct: 339 TASGYGISPEGVFIEAPSEFVVDAS 265
Score = 51.2 bits (121), Expect(2) = 7e-16, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = -1
Query: 1185 GEAELTIEILSDAGVKAEVLIQNNADGTYHITYSPAFPGTYTITIKYGGHPIPKFPTRVH 1244
G+ E+ + + +G K + L+ N DGTY + Y+P G ++ + Y G PIP P +V+
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1245 VQPAVDTSGIKVSGPGVE 1262
D + ++ GPG+E
Sbjct: 67 AVAGYDANRVRAYGPGLE 14
Score = 50.8 bits (120), Expect(2) = 1e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = -2
Query: 1499 DGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVLPSH---DASKVRASGPGLNASGI 1555
DGT V Y P G Y V V + D+ VP SPF + PS D S + ASG G++ G+
Sbjct: 483 DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGV 304
Query: 1556 PASLPVEFTIDAR 1568
P EF +DA
Sbjct: 303 FIEAPSEFVVDAS 265
Score = 42.4 bits (98), Expect(2) = 1e-12, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = -1
Query: 1571 GQGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIH 1630
GQG + + P G+ + + + DGTY V Y P G ++ + Y G IP SPF+++
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1631 ALPTGDASKC 1640
A+ DA++
Sbjct: 67 AVAGYDANRV 38
Score = 56.2 bits (134), Expect(2) = 1e-11, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = -1
Query: 407 GTGDVAVVIVDPQGRRDTVEVALEDKGDNTFRCTYRPVMEGPHTVHVAFAGAPITRSPFP 466
G G+V ++ P GR+ ++ +++ D T+ Y P+ EGP ++ V + G PI SPF
Sbjct: 247 GQGEVEAILTTPSGRK--LQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQ 74
Query: 467 VHVAEACNPNACRASGRGLQ 486
V+ + N RA G GL+
Sbjct: 73 VNAVAGYDANRVRAYGPGLE 14
Score = 34.3 bits (77), Expect(2) = 1e-11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 323 EEAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAGQNIERSPFEVNVGMAL--GDANKVS 380
E++K+ N D T V+Y+P+ G +KV V + + SPF + + D + ++
Sbjct: 516 EKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSIT 337
Query: 381 ARGPGLEPVGNVANKPTYF 399
A G G+ P G P+ F
Sbjct: 336 ASGYGISPEGVFIEAPSEF 280
Score = 52.0 bits (123), Expect(2) = 3e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = -1
Query: 506 GSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYAIPRSPFEVQ 565
G GE++ + P G + V DG + Y P+ G + +T+ G IP SPF+V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 566 VSPEAGAQKVRAWGPGLETG 585
A +VRA+GPGLE G
Sbjct: 67 AVAGYDANRVRAYGPGLEGG 8
Score = 36.6 bits (83), Expect(2) = 3e-11, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = -2
Query: 414 VIVDPQGRRDTVEVALEDKGDNTFRCTYRPVMEGPHTVHVAFAGAPITRSPFPVHVAEA- 472
+++DP+ + + + D T TY P G + V V+ P+ SPF + +
Sbjct: 531 LLMDPEKSK----INCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSE 364
Query: 473 CNPN--ACRASGRGLQPKGVRVKEVADFKV 500
+P+ + ASG G+ P+GV ++ ++F V
Sbjct: 363 LDPDVSSITASGYGISPEGVFIEAPSEFVV 274
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = -1
Query: 996 GQGQLDVRMTSPSRRPIPCKLEPGGGAEAQAVRYMPPEEGPYKVDITYDGHPVPGSPFAV 1055
GQG+++ +T+PS R + ++ V Y P EEGP +D+TY G P+PGSPF V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDG-TYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQV 71
Query: 1056 EGVLPPDPSKVCAYGPGLKGGL 1077
V D ++V AYGPGL+GGL
Sbjct: 70 NAVAGYDANRVRAYGPGLEGGL 5
Score = 47.4 bits (111), Expect(2) = 3e-10, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -1
Query: 1115 DGSCAVSYLPTEPGEYTINILFAEAHIPGSPFKATIQPVFDPSKVRASGPGLERG 1169
DG+ V Y P E G ++++ + IPGSPF+ +D ++VRA GPGLE G
Sbjct: 172 DGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYGPGLEGG 8
Score = 37.7 bits (86), Expect(2) = 3e-10, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = -2
Query: 1027 VRYMPPEEGPYKVDITYDGHPVPGSPFA---VEGVLPPDPSKVCAYGPGL--KGGLVGTP 1081
V Y+P G YKV +++ PVPGSPF L PD S + A G G+ +G + P
Sbjct: 468 VTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGVFIEAP 289
Query: 1082 APFSID 1087
+ F +D
Sbjct: 288 SEFVVD 271
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Frame = -1
Query: 2335 EFSIWTRE-AGAGGLSIAVEGPSKAEIAFED--RKDGSCG----VSYVVQEPGD--YEVS 2385
EF + RE G L IAV+GP K + + R +G C VS+ +Q G+ + S
Sbjct: 583 EFVVDAREETRVGDLDIAVDGPGKIQDKLRE*XRWNGQCDLHT*VSWGIQGEGEPRGQAS 404
Query: 2386 IKFNDEHIPDSPF-VVPVASLSDDA--RRLTVTSLQETGLKVNQPASFAVQLNGARGVID 2442
+ H P F P + R +T S+ ++V L G +G ++
Sbjct: 403 TRIT-LHCPHYTF*AGP*CQQHNSVWLRNITRGSVH*GTVRVCSGRECVGPLKG-QGEVE 230
Query: 2443 ARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQ 2502
A + TPSG + V + + + + P E G S+DV + G IPGSPF++ +
Sbjct: 229 AILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQV----NAV 62
Query: 2503 AG-DPGLVSAYGPGLEGGTT 2521
AG D V AYGPGLEGG T
Sbjct: 61 AGYDANRVRAYGPGLEGGLT 2
Score = 43.5 bits (101), Expect(2) = 6e-10, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = -1
Query: 1675 GKGKVTCTVSTPDGAELDVDVVENHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVL 1734
G+G+V ++TP G +L V DGT+ + YT E G + + + G IP SPF V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1735 AC 1736
A
Sbjct: 67 AV 62
Score = 40.4 bits (93), Expect(2) = 6e-10, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Frame = -2
Query: 1573 GLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHAL 1632
G+ ++DPE K N + DGT V+Y+P+ G Y + + +G +P SPF
Sbjct: 546 GIWI*LLMDPEKS--KINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT 373
Query: 1633 PTGDASKCLVTVSIGGHGL 1651
P+ + + +++ G+G+
Sbjct: 372 PS-ELDPDVSSITASGYGI 319
Score = 43.1 bits (100), Expect(2) = 1e-09, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -1
Query: 921 IIDN-HDYSYTVKYTAVQQGNMAVTVTYGGDPVPKSPFVVNVAPPLDLSKVKVQG 974
++DN D +Y V YT +++G ++ VTY G P+P SPF VN D ++V+ G
Sbjct: 190 LVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYG 26
Score = 40.4 bits (93), Expect(2) = 1e-09, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -2
Query: 829 TFTVKYTPPGAGHYTIMVLFANQEIPASPFHIKVDPSH---DASKVKAEGPGLSRTGVEV 885
T V Y P G Y + V ++ +P SPF + PS D S + A G G+S GV +
Sbjct: 477 TVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGVFI 298
Query: 886 GKPTHFTV 893
P+ F V
Sbjct: 297 EAPSEFVV 274
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -1
Query: 1796 KGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQF-Y 1854
+GE+ + PSG+ + + + KDGT V Y P E+G + + Y G IPGSP Q
Sbjct: 244 QGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNA 65
Query: 1855 VDAINSRHVSAYGPGLSHGM 1874
V ++ V AYGPGL G+
Sbjct: 64 VAGYDANRVRAYGPGLEGGL 5
Score = 38.5 bits (88), Expect(2) = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -2
Query: 2002 IGISFTPKEVGEHVVSVRKSGKHVTNSPFKILVGPSEIG-DASKVRVWGKGLSEGQTFQV 2060
+ +++ P+ GE+ V V K V SPF L+ PSE+ D S + G G+S F
Sbjct: 474 VNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGVFIE 295
Query: 2061 A--EFIVD 2066
A EF+VD
Sbjct: 294 APSEFVVD 271
Score = 36.6 bits (83), Expect(2) = 3e-07, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 2084 KVDINCEDMEDGTCKVTYCPTEPGTYIINIKFADKHVPGSPFTVK 2128
K+ ++M+DGT V Y P E G +++ + +PGSPF V
Sbjct: 202 KLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = -1
Query: 2250 DMTAQVTSPSGKTEAAEIVEGEDSAYSVRFVPQEMGPHTVTVKYRGQHVPGSPFQFTVGP 2309
++ A +T+PSG+ + +D Y V + P E GP ++ V Y+G +PGSPFQ V
Sbjct: 238 EVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQ--VNA 65
Query: 2310 LGEGGAHKVRAGGTGLERGV 2329
+ A++VRA G GLE G+
Sbjct: 64 VAGYDANRVRAYGPGLEGGL 5
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = -2
Query: 1900 PSKAEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKIT 1948
P K++I C + DGT V+Y+P PG+Y + V DK +PGSPFTA IT
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT 373
Score = 40.8 bits (94), Expect(2) = 5e-07, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -1
Query: 829 TFTVKYTPPGAGHYTIMVLFANQEIPASPFHIKVDPSHDASKVKAEGPGL 878
T+ V YTP G ++ V + IP SPF + +DA++V+A GPGL
Sbjct: 166 TYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYGPGL 17
Score = 33.1 bits (74), Expect(2) = 5e-07, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = -2
Query: 717 IKVIPNGDGTFRCSYVPTKPIKHTIIVSWGGVNVPKSPFRVNVGEGS-HPE--RVKVYGP 773
I + DGT +Y+P P ++ + VS G VP SPF + P+ + G
Sbjct: 504 INCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGY 325
Query: 774 GVEKTGLKANEPTYFTVDCS 793
G+ G+ P+ F VD S
Sbjct: 324 GISPEGVFIEAPSEFVVDAS 265
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = -2
Query: 2082 PSKVDINCEDMEDGTCKVTYCPTEPGTYIINIKFADKHVPGSPFTVKVT 2130
P K INC + +DGT VTY P PG Y + + DK VPGSPFT +T
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT 373
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 43/81 (53%)
Frame = -1
Query: 307 GVGEVLVYIEDPEGHTEEAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAGQNIERSPFE 366
G GEV + P G + V +N KD TY V Y P G + V + G I SPF+
Sbjct: 247 GQGEVEAILTTPSGRKLQTLV--DNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQ 74
Query: 367 VNVGMALGDANKVSARGPGLE 387
VN +A DAN+V A GPGLE
Sbjct: 73 VNA-VAGYDANRVRAYGPGLE 14
Score = 40.8 bits (94), Expect(2) = 1e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 1391 PSEAKM-SCKDN-KDGSCTVEYIPFTPGDYDVNITFGGQPIPGSPFRXXXXXXXXXXXXX 1448
PS K+ + DN KDG+ V Y P G +++T+ G PIPGSPF+
Sbjct: 214 PSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVR 35
Query: 1449 CSGPGLGTGV 1458
GPGL G+
Sbjct: 34 AYGPGLEGGL 5
Score = 28.5 bits (62), Expect(2) = 1e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = -2
Query: 1293 VLNPSGAKTDTYVTDNGDGTYRVQYTAYEEGVHLVEVLYDEVAVPKSPFRVGVTEG-CDP 1351
+++P +K + D DGT V Y G + V+V + + VP SPF +T DP
Sbjct: 528 LMDPEKSKINCVNXD--DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDP 355
Query: 1352 --TRVRAFGPGL--EGGLVNKANRFTV 1374
+ + A G G+ EG + + F V
Sbjct: 354 DVSSITASGYGISPEGVFIEAPSEFVV 274
Score = 32.7 bits (73), Expect(2) = 2e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = -2
Query: 531 DGVFECEYYPVVPGKYVVTITWGGYAIPRSPFEVQVSP---EAGAQKVRAWGPGL--ETG 585
DG Y P PG+Y V ++ G +P SPF ++P + + A G G+ E
Sbjct: 483 DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGV 304
Query: 586 QVGKSADFVVEA 597
+ ++FVV+A
Sbjct: 303 FIEAPSEFVVDA 268
Score = 32.7 bits (73), Expect(2) = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 612 PSQAKIE--CDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPD 669
PS K++ D+ DG+ V Y P E G ++ V I SPF + A +
Sbjct: 214 PSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN---AVAGYDAN 44
Query: 670 KVKAFGPGLE 679
+V+A+GPGLE
Sbjct: 43 RVRAYGPGLE 14
Score = 33.9 bits (76), Expect(2) = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -1
Query: 1889 GEGGLSLAVEGPSKAEI-TCKDN-KDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAK 1946
G+G + + PS ++ T DN KDGT V Y P G S+ V + IPGSPF
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1947 -ITGDDSMR 1954
+ G D+ R
Sbjct: 67 AVAGYDANR 41
Score = 31.2 bits (69), Expect(2) = 2e-04, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Frame = -2
Query: 1809 KTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDA------INSRH 1862
+ ++ N + DGT+ V Y P G +++ + + +PGSP + ++S
Sbjct: 516 EKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSIT 337
Query: 1863 VSAYGPGLSHGMVNKPATFTI 1883
S YG + P+ F +
Sbjct: 336 ASGYGISPEGVFIEAPSEFVV 274
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = -1
Query: 1977 QLTASIRAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHVVSVRKSGKHVTNSPFKILVGP 2036
++ A + PSG + L+ + + + +TP E G + V G + SPF+ V
Sbjct: 238 EVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQ--VNA 65
Query: 2037 SEIGDASKVRVWGKGLSEGQT 2057
DA++VR +G GL G T
Sbjct: 64 VAGYDANRVRAYGPGLEGGLT 2
Score = 34.3 bits (77), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 2546 PSKVQLDCRECPEGHV-VTYTPMAPGNYLIAIKYGGPQHIVGSPFKAKVTGPRL 2598
P K +++C +G V VTY P PG Y + + +G + + GSPF A +T L
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGD-KPVPGSPFTALITPSEL 361
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 1693 VDVVENHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVL 1734
++ V DGT ++ Y PG+Y + + G + +P SPF L
Sbjct: 504 INCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTAL 379
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -1
Query: 2682 EVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVN 2724
+ V +M + Y V YT E+G L V + +PGSPF+VN
Sbjct: 196 QTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 2694 NVTYTVKEKGDYILIVKWGDESVPGSPF 2721
NVTY + G+Y + V GD+ VPGSPF
Sbjct: 471 NVTYIPEFPGEYKVKVSHGDKPVPGSPF 388
>19002
Length = 842
Score = 101 bits (252), Expect = 4e-21, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Frame = -2
Query: 67 DGLRLIALLEVLSQKRMYRKFHPRPNFRQMKLENVSVALEFLEREHIKLVSIDSKAIVDG 126
DG L+ LLEV + + + R LENV AL FL + + L ++ + IVDG
Sbjct: 841 DGKMLMKLLEVRVRGEIASDX--KGKMRIHCLENVDKALTFLHEQRVHLENMGAHDIVDG 668
Query: 127 NLKLILGLIWTLILHYSISMPMWEDEDDEDARKQTPKQRLLGWIQNKV---PQLPITNFN 183
+ +L LGLIWT+IL + I M E+ D+ + + + K LL W Q K P + + NF
Sbjct: 667 SSRLTLGLIWTIILRFQIQDIMIEEVDNSETK--SAKDALLLWCQMKTAGYPNVNVRNFT 494
Query: 184 RDWQDGKALGALVDNCAPGLCPDWEAWDPNQPVQNAREAMQQADDWLGVPQVIAPEEIVD 243
W+DG A A++ P L ++ + +QN + A A+D LG+ ++ PE++
Sbjct: 493 TSWRDGLAFNAIIHKHRPDLV-QYDRLHKSSAIQNLQNAFTVAEDKLGLTALLEPEDVNV 317
Query: 244 PNVDEHSVMTYLSQF 258
DE S++TY+ +
Sbjct: 316 EYPDEKSIITYVVTY 272
>05081
Length = 981
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = -1
Query: 2629 IPKFSSDASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPK-TPCEEVYVKH 2687
I +F DASKVV +G GL +AF + +F VD AG ++ VG+ P P E+ VK
Sbjct: 975 IRRFRGDASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKK 796
Query: 2688 MGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPF 2721
N Y + Y V E GD++L VKWGD+ +PGSPF
Sbjct: 795 TTNTSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = -1
Query: 1539 DASKVRASGPGLNASGIPASLPVEFTIDARDAGQGLLTVQILDPEGKPK-KANIRDNGDG 1597
DASKV A G GL + + F +D +DAG+ LL V ++ P GKP+ + +++ +
Sbjct: 957 DASKVVAKGQGLKKA--FTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNT 784
Query: 1598 TYTVSYLPDMSGRYTITIKYGGDEIPYSPF 1627
+YT++Y G + + +K+G D+IP SPF
Sbjct: 783 SYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = -1
Query: 1859 NSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPS---KAEITCKDNKDGTC 1915
++ V A G GL N+ TF + KDAGE L + + PS +AE++ K + +
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 1916 TVSYLPTAPGDYSIIVRFDDKHIPGSPF 1943
T++Y T GD+ + V++ D IPGSPF
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = -1
Query: 2040 GDASKVRVWGKGLSEGQTFQVAEFIVDTRNAGYGGLGLSIEGPS---KVDINCEDMEDGT 2096
GDASKV G+GL + T ++ F VD ++AG L + + PS + +++ + + +
Sbjct: 960 GDASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTS 781
Query: 2097 CKVTYCPTEPGTYIINIKFADKHVPGSPFTV 2127
+ Y TE G +++++K+ D +PGSPF +
Sbjct: 780 YTINYKVTEIGDHVLHVKWGDDDIPGSPFVL 688
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -1
Query: 1449 CSGPGLGTGVRARVPQTFTVDCSQAGRAPLQVAVLGPTGVAEP-VEVRDNGDGTHTVHYT 1507
G GL R+ QTF VD AG A LQV ++ P+G E + V+ + ++T++Y
Sbjct: 939 AKGQGLKKAFTNRL-QTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTINYK 763
Query: 1508 PATDGPYTVAVKYADQEVPRSPF 1530
G + + VK+ D ++P SPF
Sbjct: 762 VTEIGDHVLHVKWGDDDIPGSPF 694
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Frame = -1
Query: 2312 EGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPS---KAEIAFEDRKDG 2368
G A KV A G GL++ F + ++AG L + + PS +AE++ + +
Sbjct: 963 RGDASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNT 784
Query: 2369 SCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVV 2400
S ++Y V E GD+ + +K+ D+ IP SPFV+
Sbjct: 783 SYTINYKVTEIGDHVLHVKWGDDDIPGSPFVL 688
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = -1
Query: 1155 DPSKVRASGPGLERGKAGEAATFTVDCSEAGEAELTIEILSDAGV-KAEVLIQNNADGTY 1213
D SKV A G GL++ TF VD +AGEA L + +++ +G +AE+ ++ + +Y
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 1214 HITYSPAFPGTYTITIKYGGHPIPKFP 1240
I Y G + + +K+G IP P
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSP 697
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -1
Query: 1062 DPSKVCAYGPGLKGGLVGTPAPFSIDTKXXXXXXXXXXVEGPC---EAKIECQDNGDGSC 1118
D SKV A G GLK F +D K + P EA++ + + S
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 1119 AVSYLPTEPGEYTINILFAEAHIPGSPF 1146
++Y TE G++ +++ + + IPGSPF
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%)
Frame = -1
Query: 867 DASKVKAEGPGLSRTGVEVGKPTHFTVLTKGAGKAKLDVHFAGAAKGEAVRDFEIIDNHD 926
DASKV A+G GL + + F V K AG+A L V A G+ + + +
Sbjct: 957 DASKVVAKGQGLKKAFTN--RLQTFQVDVKDAGEALLQVGMI-APSGKPEAELSVKKTTN 787
Query: 927 YSYTVKYTAVQQGNMAVTVTYGGDPVPKSPFVVN 960
SYT+ Y + G+ + V +G D +P SPFV++
Sbjct: 786 TSYTINYKVTEIGDHVLHVKWGDDDIPGSPFVLS 685
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = -1
Query: 1350 DPTRVRAFGPGLEGGLVNKANRFTVXXXXXXXXXXXXXXXXPS---EAKMSCKDNKDGSC 1406
D ++V A G GL+ N+ F V PS EA++S K + S
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 1407 TVEYIPFTPGDYDVNITFGGQPIPGSPF 1434
T+ Y GD+ +++ +G IPGSPF
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%)
Frame = -1
Query: 374 GDANKVSARGPGLEPVGNVANKPTYFDIYTAGAGTGDVAVVIVDPQGRRDTVEVALEDKG 433
GDA+KV A+G GL+ N+ F + AG + V ++ P G+ + E++++
Sbjct: 960 GDASKVVAKGQGLKKA--FTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEA-ELSVKKTT 790
Query: 434 DNTFRCTYRPVMEGPHTVHVAFAGAPITRSPF 465
+ ++ Y+ G H +HV + I SPF
Sbjct: 789 NTSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 38.1 bits (87), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = -1
Query: 2231 RLGSFGSITRQQEGEASSQDMTAQVTSPSGKTEA-AEIVEGEDSAYSVRFVPQEMGPHTV 2289
RL +F + + GEA Q + +PSGK EA + + +++Y++ + E+G H +
Sbjct: 903 RLQTF-QVDVKDAGEALLQ---VGMIAPSGKPEAELSVKKTTNTSYTINYKVTEIGDHVL 736
Query: 2290 TVKYRGQHVPGSPF 2303
VK+ +PGSPF
Sbjct: 735 HVKWGDDDIPGSPF 694
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -1
Query: 480 ASGRGLQPKGVRVKEVADFKVFTKGAGSGELKVTVKGPKGT-EEPVKVREAGDGVFECEY 538
A G+GL K + F+V K AG L+V + P G E + V++ + + Y
Sbjct: 939 AKGQGL--KKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTINY 766
Query: 539 YPVVPGKYVVTITWGGYAIPRSPF 562
G +V+ + WG IP SPF
Sbjct: 765 KVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Frame = -1
Query: 572 AQKVRAWGPGLETGQVGKSADFVVEAIGTEVGTLGFSIEGPS---QAKIECDDKGDGSCD 628
A KV A G GL+ + F V+ L + PS +A++ + S
Sbjct: 954 ASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYT 775
Query: 629 VRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPA---PPDCFP 668
+ Y TE G++ +HV D+DI SPF+ A P FP
Sbjct: 774 INYKVTEIGDHVLHVKWGDDDIPGSPFVLST*TA*FPPETSFP 646
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -1
Query: 670 KVKAFGPGLEPTGCIVDRPAEFTIDARAAGKGDLKLYAQDADGCP-IDIKVIPNGDGTFR 728
KV A G GL+ +R F +D + AG+ L++ G P ++ V + ++
Sbjct: 948 KVVAKGQGLKK--AFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYT 775
Query: 729 CSYVPTKPIKHTIIVSWGGVNVPKSPF 755
+Y T+ H + V WG ++P SPF
Sbjct: 774 INYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -1
Query: 966 DLSKV--KVQGLNSKVAVGQEQAFSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGGGAE 1023
D SKV K QGL K + Q F V+ + AG + L V M +PS +P
Sbjct: 957 DASKVVAKGQGLK-KAFTNRLQTFQVDVKDAG-EALLQVGMIAPSGKPEAELSVKKTTNT 784
Query: 1024 AQAVRYMPPEEGPYKVDITYDGHPVPGSPFAV 1055
+ + Y E G + + + + +PGSPF +
Sbjct: 783 SYTINYKVTEIGDHVLHVKWGDDDIPGSPFVL 688
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = -1
Query: 2421 GLK---VNQPASFAVQLNGA-RGVIDARVHTPSGAVE-ECYVSELDSDKHTIRFIPHENG 2475
GLK N+ +F V + A ++ + PSG E E V + + +TI + E G
Sbjct: 927 GLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTINYKVTEIG 748
Query: 2476 VHSIDVKFNGAHIPGSPF 2493
H + VK+ IPGSPF
Sbjct: 747 DHVLHVKWGDDDIPGSPF 694
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 1978 LTASIRAPSGNEEPCL-LKRLPNRHIGISFTPKEVGEHVVSVRKSGKHVTNSPF 2030
L + APSG E L +K+ N I++ E+G+HV+ V+ + SPF
Sbjct: 855 LQVGMIAPSGKPEAELSVKKTTNTSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
>29755
Length = 460
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 39/45 (86%)
Frame = +3
Query: 2681 EEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDESVPGSPFKVNV 2725
+E+ VK++G+ YN+ YTVK++G Y+LIV+WGDE++PGSPF V+V
Sbjct: 3 DELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 38.9 bits (89), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 1904 EITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKITGD 1950
E+T K G ++Y G Y +IVR+ D++IPGSPF + D
Sbjct: 6 ELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI*D 146
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 1701 GTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHV 1733
G ++I YT + G Y++ +R+G E+IP SPF V
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAV 131
Score = 37.7 bits (86), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 1490 EPVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVL 1535
+ + V+ G G + ++YT G Y + V++ D+ +P SPF + V+
Sbjct: 3 DELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI 140
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +3
Query: 929 YTVKYTAVQQGNMAVTVTYGGDPVPKSPFVVNV-----APPLDLSKVKV 972
Y + YT QQG+ + V +G + +P SPF V+V A LDL+ V
Sbjct: 39 YNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI*DFPAAHLDLTNSSV 185
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 2095 GTCKVTYCPTEPGTYIINIKFADKHVPGSPFTVKV 2129
G + Y + G+Y++ +++ D+++PGSPF V V
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 2368 GSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVPV 2402
G ++Y V++ G Y + +++ DE+IP SPF V V
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 33.9 bits (76), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 723 GDGTFRCSYVPTKPIKHTIIVSWGGVNVPKSPFRVNV 759
G G + +Y + + +IV WG N+P SPF V+V
Sbjct: 27 GSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 522 EPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYAIPRSPFEVQV 566
+ + V+ G G + Y G Y++ + WG IP SPF V V
Sbjct: 3 DELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
>19147
Length = 474
Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +1
Query: 107 FLEREHIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDARKQTPKQRL 166
++ + +KLVSI ++ IVDGN+K+ LG+IWT+IL ++I D + T K+ L
Sbjct: 49 YIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQ--------DITVEELTAKEGL 204
Query: 167 LGWIQNKVP---QLPITNFNRDWQDGKALGALVDNCAPGL 203
L W Q K + + NF+ ++DG A AL+ P L
Sbjct: 205 LLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPEL 324
>19154
Length = 512
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = +2
Query: 987 FSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGGGAEAQAVRYMPPEEGPYKVDITYDGH 1046
FSV T +G Q VR+ SPS + +P + + Y P E G +++ +TY+
Sbjct: 77 FSVETSRSGKCEQ-TVRIVSPSGQSVPVDVTETS-TYGYNITYQPSESGQHRIFLTYNSL 250
Query: 1047 PVPGSPFA---VEGVLPPDPSKVCAYGPGLKGGLVGTPAPFSIDTKXXXXXXXXXXVEGP 1103
+PGSPF EGVLPP AYG GL G A F ID + V+GP
Sbjct: 251 ELPGSPFTQEISEGVLPP------AYGEGLHRGEEDKAAIFYIDAR-GLTGEPSVQVDGP 409
Query: 1104 CE-AKIECQDNGDGSCAVSYLPTEPG 1128
AK + DG +V+Y+P E G
Sbjct: 410 NSIAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Frame = +2
Query: 497 DFKVFTKGAGSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYA 556
DF V T +G E V + P G PV V E + Y P G++ + +T+
Sbjct: 74 DFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLE 253
Query: 557 IPRSPFEVQVSPEAGAQKVRAWGPGLETGQVGKSADFVVEAIGTEVGTLGFSIEGP-SQA 615
+P SPF ++S A+G GL G+ K+A F ++A G G ++GP S A
Sbjct: 254 LPGSPFTQEISEGVLPP---AYGEGLHRGEEDKAAIFYIDARGL-TGEPSVQVDGPNSIA 421
Query: 616 KIECDDKGDGSCDVRYWPTEPG 637
K + + DG V Y P E G
Sbjct: 422 KCSIEAQPDGQYSVTYIPVEVG 487
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = +2
Query: 1796 KGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYV 1855
K E T + PSG++ ++T+ + Y P+E G H++ + Y+ +PGSP F
Sbjct: 104 KCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLELPGSP--FTQ 277
Query: 1856 DAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGP-SKAEITCKDNKDGT 1914
+ AYG GL G +K A F I + G S+ V+GP S A+ + + DG
Sbjct: 278 EISEGVLPPAYGEGLHRGEEDKAAIFYIDARGL-TGEPSVQVDGPNSIAKCSIEAQPDGQ 454
Query: 1915 CTVSYLPTAPG 1925
+V+Y+P G
Sbjct: 455 YSVTYIPVEVG 487
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Frame = +2
Query: 2250 DMTAQVTSPSGKTEAAEIVEGEDSAYSVRFVPQEMGPHTVTVKYRGQHVPGSPFQFTVGP 2309
+ T ++ SPSG++ ++ E Y++ + P E G H + + Y +PGSPF
Sbjct: 110 EQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLELPGSPF---TQE 280
Query: 2310 LGEGGAHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGP-SKAEIAFEDRKDG 2368
+ EG A G GL RG A F I R G S+ V+GP S A+ + E + DG
Sbjct: 281 ISEGVLPP--AYGEGLHRGEEDKAAIFYIDAR-GLTGEPSVQVDGPNSIAKCSIEAQPDG 451
Query: 2369 SCGVSYVVQEPG 2380
V+Y+ E G
Sbjct: 452 QYSVTYIPVEVG 487
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Frame = +2
Query: 2444 RVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQA 2503
R+ +PSG V+E + + I + P E+G H I + +N +PGSPF + E
Sbjct: 122 RIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLELPGSPFTQEISEGV-- 295
Query: 2504 GDPGLVSAYGPGLEGGTTGVSSEFIVNTQNAGSGALSVTIDGPSKV-QLDCRECPEG-HV 2561
L AYG GL G ++ F ++ + +G SV +DGP+ + + P+G +
Sbjct: 296 ----LPPAYGEGLHRGEEDKAAIFYIDARGL-TGEPSVQVDGPNSIAKCSIEAQPDGQYS 460
Query: 2562 VTYTPMAPGN 2571
VTY P+ G+
Sbjct: 461 VTYIPVEVGS 490
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Frame = +2
Query: 1466 FTVDCSQAGRAPLQVAVLGPTGVAEPVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEV 1525
F+V+ S++G+ V ++ P+G + PV+V + + + Y P+ G + + + Y E+
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLEL 256
Query: 1526 PRSPFKIK----VLPSHDASKVRASGPGLNASGIPASLPVEFTIDARDAGQGLLTVQILD 1581
P SPF + VLP A G GL+ F IDAR G +VQ+
Sbjct: 257 PGSPFTQEISEGVLPP-------AYGEGLHRG--EEDKAAIFYIDARGL-TGEPSVQVDG 406
Query: 1582 PEGKPKKANIRDNGDGTYTVSYLP 1605
P K +I DG Y+V+Y+P
Sbjct: 407 PNSI-AKCSIEAQPDGQYSVTYIP 475
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Frame = +2
Query: 1965 DVSLKITEGDLSQLTASIRAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHVVSVRKSGKH 2024
D S++ + + T I +PSG P + I++ P E G+H + + +
Sbjct: 74 DFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLE 253
Query: 2025 VTNSPFKILVGPSEIGDASKVRVWGKGLSEGQTFQVAEFIVDTRNAGYGGLGLSIEGPSK 2084
+ SPF EI + +G+GL G+ + A F +D R G + ++GP+
Sbjct: 254 LPGSPFT-----QEISEGVLPPAYGEGLHRGEEDKAAIFYIDARGLT-GEPSVQVDGPNS 415
Query: 2085 V-DINCEDMEDGTCKVTYCPTEPGT 2108
+ + E DG VTY P E G+
Sbjct: 416 IAKCSIEAQPDGQYSVTYIPVEVGS 490
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +2
Query: 1120 VSYLPTEPGEYTINILFAEAHIPGSPFKATI-QPVFDPSKVRASGPGLERGKAGEAATFT 1178
++Y P+E G++ I + + +PGSPF I + V P A G GL RG+ +AA F
Sbjct: 191 ITYQPSESGQHRIFLTYNSLELPGSPFTQEISEGVLPP----AYGEGLHRGEEDKAAIFY 358
Query: 1179 VDCSEAGEAELTIEILSDAGVKAEVLIQNNADGTYHITYSPAFPGT 1224
+D + E ++++ + A+ I+ DG Y +TY P G+
Sbjct: 359 ID-ARGLTGEPSVQVDGPNSI-AKCSIEAQPDGQYSVTYIPVEVGS 490
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Frame = +2
Query: 1561 VEFTIDARDAGQGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGD 1620
++F+++ +G+ TV+I+ P G+ ++ + Y ++Y P SG++ I + Y
Sbjct: 71 LDFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSL 250
Query: 1621 EIPYSPF 1627
E+P SPF
Sbjct: 251 ELPGSPF 271
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%)
Frame = +2
Query: 399 FDIYTAGAGTGDVAVVIVDPQGRRDTVEVALEDKGDNTFRCTYRPVMEGPHTVHVAFAGA 458
F + T+ +G + V IV P G+ +V V + + + TY+P G H + + +
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQ--SVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSL 250
Query: 459 PITRSPFPVHVAEACNPNACRASGRGLQPKGVRVKEVADFKVFTKGAGSGELKVTVKGPK 518
+ SPF ++E P A G GL +G K A F + +G +GE V V GP
Sbjct: 251 ELPGSPFTQEISEGVLPP---AYGEGLH-RGEEDK-AAIFYIDARGL-TGEPSVQVDGPN 412
Query: 519 GTEEPVKVREAGDGVFECEYYPVVPGK 545
+ + DG + Y PV G
Sbjct: 413 SIAK-CSIEAQPDGQYSVTYIPVEVGS 490
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 1667 ITVDAKAAGKGKVTCTVSTPDGAELDVDVVENHDGTFDIYYTAPEPGKYVITIRFGGEHI 1726
+V+ +GK + T + +P G + VDV E ++I Y E G++ I + + +
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLEL 256
Query: 1727 PNSPF 1731
P SPF
Sbjct: 257 PGSPF 271
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 2657 FTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDESV 2716
F+V+ S++G V + P V V YN+TY E G + + + + +
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLEL 256
Query: 2717 PGSPFKVNV 2725
PGSPF +
Sbjct: 257 PGSPFTQEI 283
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 1874 MVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTC--TVSYLPTAPGDYSIIV 1931
M+ F++ T +G+ ++ + PS + + T ++Y P+ G + I +
Sbjct: 56 MLANWLDFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFL 235
Query: 1932 RFDDKHIPGSPFTAKIT 1948
++ +PGSPFT +I+
Sbjct: 236 TYNSLELPGSPFTQEIS 286
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 2062 EFIVDTRNAGYGGLGLSIEGPSKVDINCEDMEDGTC--KVTYCPTEPGTYIINIKFADKH 2119
+F V+T +G + I PS + + E T +TY P+E G + I + +
Sbjct: 74 DFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLE 253
Query: 2120 VPGSPFTVKVT 2130
+PGSPFT +++
Sbjct: 254 LPGSPFTQEIS 286
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Frame = +2
Query: 891 FTVLTKGAGKAKLDVHFAGAAKGEAVRDFEIIDNHDYSYTVKYTAVQQGNMAVTVTYGGD 950
F+V T +GK + V + G++V ++ + Y Y + Y + G + +TY
Sbjct: 77 FSVETSRSGKCEQTVRIV-SPSGQSV-PVDVTETSTYGYNITYQPSESGQHRIFLTYNSL 250
Query: 951 PVPKSPFVVNVA----PPLDLSKVKVQGLNSKVAVGQEQAFSVNTRGAGGQGQLDV 1002
+P SPF ++ PP + +G K A+ F ++ RG G+ + V
Sbjct: 251 ELPGSPFTQEISEGVLPPAYGEGLH-RGEEDKAAI-----FYIDARGLTGEPSVQV 400
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%)
Frame = +2
Query: 299 FTVQTVDAGVGEVLVYIEDPEGHTEEAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAGQ 358
F+V+T +G E V I P G + V + Y ++Y P +G H++ + +
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYG--YNITYQPSESGQHRIFLTYNSL 250
Query: 359 NIERSPFEVNVGMALGDANKVSARGPGLEPVGNVANKPTYFDIYTAGAGTGDVAVVIVDP 418
+ SPF + + A G GL +K F I G TG+ +V +
Sbjct: 251 ELPGSPFT----QEISEGVLPPAYGEGLH--RGEEDKAAIFYIDARGL-TGEPSVQV--- 400
Query: 419 QGRRDTVEVALEDKGDNTFRCTYRPVMEG 447
G + ++E + D + TY PV G
Sbjct: 401 DGPNSIAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +2
Query: 788 FTVDCSEAGQGDVSIGIKCAPGVVGPVEAXXXXXXXXXXXXTFTVKYTPPGAGHYTIMVL 847
F+V+ S +G+ + ++ I G PV+ + + Y P +G + I +
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYG------YNITYQPSESGQHRIFLT 238
Query: 848 FANQEIPASPF 858
+ + E+P SPF
Sbjct: 239 YNSLELPGSPF 271
>35059
Length = 669
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 75/178 (42%)
Frame = +2
Query: 1165 GLERGKAGEAATFTVDCSEAGEAELTIEILSDAGVKAEVLIQNNADGTYHITYSPAFPGT 1224
G E +A A F VD AG E+ +E L + V I Y TY+PAFPG
Sbjct: 107 GAEIARATVQAEFVVDGRRAGPGEVRVE-LKGVRISLPVHITPIKYDRYRCTYTPAFPGG 283
Query: 1225 YTITIKYGGHPIPKFPTRVHVQPAVDTSGIKVSGPGVEPHGVLREVTTEFTVDARSLTAT 1284
+ + + + +P P +V V D S +KV+G G++ G + VD + +
Sbjct: 284 FLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLK--GGIAGSELRVFVDNKRGWSR 457
Query: 1285 GGNHVTARVLNPSGAKTDTYVTDNGDGTYRVQYTAYEEGVHLVEVLYDEVAVPKSPFR 1342
GGN + + + T + + V HL++V YD VP SP R
Sbjct: 458 GGN---SDMFDTPTRGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%)
Frame = +2
Query: 689 AEFTIDARAAGKGDLKLYAQDADGCPIDIKVIPNGDGTFRCSYVPTKPIKHTIIVSWGGV 748
AEF +D R AG G++++ + + + + P +RC+Y P P + V W +
Sbjct: 137 AEFVVDGRRAGPGEVRVELKGVR-ISLPVHITPIKYDRYRCTYTPAFPGGFLLYVYWSNI 313
Query: 749 NVPKSPFRVNVGEGSHPERVKVYGPGVEKTGLKANEPTYF 788
VP P +V V VKV G G+ K G+ +E F
Sbjct: 314 LVPGCPHKVTVTSKGDVSXVKVTGEGL-KGGIAGSELRVF 430
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +2
Query: 2005 SFTPKEVGEHVVSVRKSGKHVTNSPFKILVGPSEIGDASKVRVWGKGLSEGQT-FQVAEF 2063
++TP G ++ V S V P K+ V + GD S V+V G+GL G ++ F
Sbjct: 257 TYTPAFPGGFLLYVYWSNILVPGCPHKVTV--TSKGDVSXVKVTGEGLKGGIAGSELRVF 430
Query: 2064 IVDTRNAGYGGLGLSIEGPSKVDINCEDMEDGTCKVTY-CPTEPGTYIINIKFADKHVPG 2122
+ + R GG + P++ E Y CPT +++ +++ +HVPG
Sbjct: 431 VDNKRGWSRGGNSDMFDTPTRGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVPG 610
Query: 2123 SPF 2125
SP
Sbjct: 611 SPL 619
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Frame = +2
Query: 1121 SYLPTEPGEYTINILFAEAHIPGSPFKATIQPVFDPSKVRASGPGLERGKAGEAATFTVD 1180
+Y P PG + + + ++ +PG P K T+ D S V+ +G GL+ G AG VD
Sbjct: 257 TYTPAFPGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVD 436
Query: 1181 ----CSEAGEAEL-TIEILSDAGVKAEVLIQNNADGTYHITY-SPAFPGTYTITIKYGGH 1234
S G +++ +G +AE L H Y P + + ++Y G
Sbjct: 437 NKRGWSRGGNSDMFDTPTRGTSGREAERL------SPLHAVYPCPTSADKHLLQVRYDGQ 598
Query: 1235 PIPKFPTR 1242
+P P R
Sbjct: 599 HVPGSPLR 622
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 70/181 (38%), Gaps = 9/181 (4%)
Frame = +2
Query: 882 GVEVGKPT---HFTVLTKGAGKAKLDVHFAGAAKGEAVRDFEIIDNHDYSYTVKYTAVQQ 938
G E+ + T F V + AG ++ V G V I +D Y YT
Sbjct: 107 GAEIARATVQAEFVVDGRRAGPGEVRVELKGVRISLPVHITPI--KYD-RYRCTYTPAFP 277
Query: 939 GNMAVTVTYGGDPVPKSPFVVNVAPPLDLSKVKV--QGLNSKVAVGQEQAFSVNTRGAGG 996
G + V + VP P V V D+S VKV +GL +A + + F N RG
Sbjct: 278 GGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWSR 457
Query: 997 QGQLDVRMTSPSRRPIPCKLEPGGGAE----AQAVRYMPPEEGPYKVDITYDGHPVPGSP 1052
G D+ T P + G AE AV P + + + YDG VPGSP
Sbjct: 458 GGNSDMFDT-------PTRGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVPGSP 616
Query: 1053 F 1053
Sbjct: 617 L 619
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 2050 KGLSEGQTFQVAEFIVDTRNAGYGGLGLSIEGPS-KVDINCEDMEDGTCKVTYCPTEPGT 2108
KG + AEF+VD R AG G + + ++G + ++ ++ + TY P PG
Sbjct: 104 KGAEIARATVQAEFVVDGRRAGPGEVRVELKGVRISLPVHITPIKYDRYRCTYTPAFPGG 283
Query: 2109 YIINIKFADKHVPGSPFTVKVTGEG 2133
+++ + +++ VPG P V VT +G
Sbjct: 284 FLLYVYWSNILVPGCPHKVTVTSKG 358
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 2/173 (1%)
Frame = +2
Query: 2324 GLERGVAGVPAEFSIWTREAGAGGLSIAVEGPS-KAEIAFEDRKDGSCGVSYVVQEPGDY 2382
G E A V AEF + R AG G + + ++G + K +Y PG +
Sbjct: 107 GAEIARATVQAEFVVDGRRAGPGEVRVELKGVRISLPVHITPIKYDRYRCTYTPAFPGGF 286
Query: 2383 EVSIKFNDEHIPDSPFVVPVASLSDDARRLTVTSLQETGLKVNQPASFAVQLNG-ARGVI 2441
+ + +++ +P P V V S D + + G+ ++ F G +RG
Sbjct: 287 LLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWSRGGN 466
Query: 2442 DARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFK 2494
TP+ L S H + P H + V+++G H+PGSP +
Sbjct: 467 SDMFDTPTRGTSGREAERL-SPLHAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 38.1 bits (87), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Frame = +2
Query: 406 AGTGDVAVVIVDPQGRRDTVEVALEDKGDNTFRCTYRPVMEGPHTVHVAFAGAPITRSPF 465
AG G+V V + +G R ++ V + + +RCTY P G ++V ++ + P
Sbjct: 164 AGPGEVRVEL---KGVRISLPVHITPIKYDRYRCTYTPAFPGGFLLYVYWSNILVPGCPH 334
Query: 466 PVHVAEACNPNACRASGRGLQPKGVRVKEVADF----KVFTKGAGSGELKVTVKGPKGTE 521
V V + + + +G GL+ G+ E+ F + +++G S +G G E
Sbjct: 335 KVTVTSKGDVSXVKVTGEGLK-GGIAGSELRVFVDNKRGWSRGGNSDMFDTPTRGTSGRE 511
Query: 522 EPVKVREAGDGVFECEYYPVVPGKYVVTITWGGYAIPRSPFE 563
+ V+ C P K+++ + + G +P SP
Sbjct: 512 --AERLSPLHAVYPC---PTSADKHLLQVRYDGQHVPGSPLR 622
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +2
Query: 2642 RGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKE 2701
+G +++A V + F VD +AG + V + G + V++ + Y TYT
Sbjct: 104 KGAEIARATV--QAEFVVDGRRAGPGEVRVELKGVRISLP-VHITPIKYDRYRCTYTPAF 274
Query: 2702 KGDYILIVKWGDESVPGSPFKVNV 2725
G ++L V W + VPG P KV V
Sbjct: 275 PGGFLLYVYWSNILVPGCPHKVTV 346
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Frame = +2
Query: 2515 GLEGGTTGVSSEFIVNTQNAGSGALSVTIDGPSKVQLDCRECP---EGHVVTYTPMAPGN 2571
G E V +EF+V+ + AG G + V + G ++ L P + + TYTP PG
Sbjct: 107 GAEIARATVQAEFVVDGRRAGPGEVRVELKG-VRISLPVHITPIKYDRYRCTYTPAFPGG 283
Query: 2572 YLIAIKY------GGPQHIV----GSPFKAKVTGPRLSGG 2601
+L+ + + G P + G KVTG L GG
Sbjct: 284 FLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGG 403
Score = 33.9 bits (76), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 17/170 (10%)
Frame = +2
Query: 1879 ATFTIVTKDAGEGGLSLAVEGPSKA---EITCKDNKDGTCTVSYLPTAPGDYSIIVRFDD 1935
A F + + AG G + + ++G + IT CT Y P PG + + V + +
Sbjct: 137 AEFVVDGRRAGPGEVRVELKGVRISLPVHITPIKYDRYRCT--YTPAFPGGFLLYVYWSN 310
Query: 1936 KHIPGSPFTAKIT--GDDS------------MRTSQLNVGTSTDVSLKITEGDLSQLTAS 1981
+PG P +T GD S + S+L V G+
Sbjct: 311 ILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWS-RGGNSDMFDTP 487
Query: 1982 IRAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHVVSVRKSGKHVTNSPFK 2031
R SG E +RL H + P +H++ VR G+HV SP +
Sbjct: 488 TRGTSGREA----ERLSPLH-AVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 1828 APTEKGLHQMGIKYDGNHIPGSPLQ 1852
PT H + ++YDG H+PGSPL+
Sbjct: 548 CPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 3/174 (1%)
Frame = +2
Query: 977 SKVAVGQEQA-FSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGGGAEAQAVRYMPPEEG 1035
+++A QA F V+ R AG G++ V + R +P + P + Y P G
Sbjct: 110 AEIARATVQAEFVVDGRRAG-PGEVRVELKG-VRISLPVHITPIKYDRYRCT-YTPAFPG 280
Query: 1036 PYKVDITYDGHPVPGSPFAVEGVLPPDPSKVCAYGPGLKGGLVGTPAPFSIDTKXXXXXX 1095
+ + + + VPG P V D S V G GLKGG+ G+ +D K
Sbjct: 281 GFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWSRG 460
Query: 1096 XXXXVEGPCEAKIECQDNGDGS--CAVSYLPTEPGEYTINILFAEAHIPGSPFK 1147
+ ++ S AV PT ++ + + + H+PGSP +
Sbjct: 461 GNSDMFDTPTRGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Frame = +2
Query: 1814 NITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAI-NSRHVSAYGPGLSH 1872
+IT K Y P G + + + +PG P + V + + V G GL
Sbjct: 221 HITPIKYDRYRCTYTPAFPGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKG 400
Query: 1873 GMV-NKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSY-LPTAPGDYSII 1930
G+ ++ F + GG S + P++ + + Y PT+ + +
Sbjct: 401 GIAGSELRVFVDNKRGWSRGGNSDMFDTPTRGTSGREAERLSPLHAVYPCPTSADKHLLQ 580
Query: 1931 VRFDDKHIPGSPF 1943
VR+D +H+PGSP
Sbjct: 581 VRYDGQHVPGSPL 619
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 2275 YSVRFVPQEMGPHTVTVKYRGQHVPGSPFQ 2304
++V P H + V+Y GQHVPGSP +
Sbjct: 533 HAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
>09100
Length = 930
Score = 53.1 bits (126), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +1
Query: 31 EDAPWKKIQQ--NTFTRWCNEHLKCV--GKRLTDLQRDLSDGLRLIALLEVLSQKRMYRK 86
E W + QQ + + W N LK + DL+ D+ DG+ ++ ++S++++
Sbjct: 433 ESRTWIEPQQQLSAYMAWINSQLKKKPGAHLIEDLRHDMRDGVVFADVIHIVSKQQIPGI 612
Query: 87 FHPRPNFRQMKLENVSVALEFLEREHIKLVSIDSKAIVDGNLKLILGLIWTLILHY 142
+ +M+ +NV L F+ + IK+ I S+ IV+GNLK ++ LI L HY
Sbjct: 613 QNVPTTLDEMR-QNVDRVLHFMTQNRIKMHRISSRDIVEGNLKAVMRLILALAAHY 777
>17613
Length = 1108
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +2
Query: 113 IKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDARKQTPKQRLLGWIQN 172
+KLVSI ++ IVDGN+K+ LG+IWT+IL ++I D + T K+ LL W Q
Sbjct: 65 VKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQ--------DITVEELTAKEGLLLWCQR 220
Query: 173 K 173
K
Sbjct: 221 K 223
>04951
Length = 2852
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Frame = +1
Query: 97 KLENVSVALEF---LEREHIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDED 153
K+EN A++ ++ +KLV I K I DGN L LGL+W L+ Y++++ ED
Sbjct: 4 KIENCEYAVQLGPQMKVCKMKLVGIGGKDIHDGNPVLTLGLVWQLMRAYTLAILSKLTED 183
Query: 154 DEDARKQTPKQRLLGWIQNKVPQ-LPITNF-NRDWQDGKALGALVDNCAPGLCPDWEAWD 211
+K ++ W+ +KV + I +F + DG + ++++ PG+ +WE +
Sbjct: 184 ----KKPIQDSEIVDWVNSKVKKDERIGSFQDSKLNDGVIVAKVIESIKPGIV-NWENIN 348
Query: 212 PNQP-----VQNAREAMQQADDWLGVPQVIAPEEIVD 243
PN + NAR A+ A +G PE+IV+
Sbjct: 349 PNASEPDDRLANARYAIGLARK-IGAGVYALPEDIVE 456
>09711
Length = 3041
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Frame = +1
Query: 39 QQNTFTRWCNEHLKCVGKRLTDLQRDLSDGLRLIALLEV----LSQKRMYRKFHPRPNFR 94
++ T+ W N V + L DL DGL + L + L +K + R
Sbjct: 850 EEKTYRNWMNS--LGVSPFVHHLYSDLYDGLIIFQLYDYIQPGLVDWSKVKKKFNKLKAR 1023
Query: 95 QMKLENVSVALEF---LEREHIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWED 151
++EN + A+E ++ +KLV I + I+DGN L LGL+W L+ Y++++
Sbjct: 1024 FERIENCNYAVELGPQVKLVKVKLVGIAGQDILDGNPVLTLGLVWQLMRAYTLAILSKIT 1203
Query: 152 EDDEDARKQTPKQRLLGWIQNKVPQLP-ITNF-NRDWQDGKALGALVDNCAPGLCPDWE- 208
E++ K ++ W+ +K+ + I+ F +R DG + +++ PG+ +W+
Sbjct: 1204 ENN----KPISDNEIITWVNSKIKKDDRISGFQDRKLNDGVIVARVIEAIKPGIV-NWDN 1368
Query: 209 ----AWDPNQPVQNAREAMQQADDWLGVPQVIAPEEIVD 243
A D + NAR A+ A +G PE+IV+
Sbjct: 1369 IDCSARDYQDRLTNARYAIGLARK-IGAGVYALPEDIVE 1482
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Frame = +1
Query: 39 QQNTFTRWCNEHLK----CVGKRLTDLQRD-------LSDGLRLIALLEVLSQKRMYRKF 87
+Q F W N HL C K L L D ++DG+ L L+ + +
Sbjct: 52 EQKAFAEWINRHLSDXPDC--KHLLPLDADGTQLFGQMADGVLLCKLINHSVSNTIDERT 225
Query: 88 HPRPNFRQMKL-ENVSVALEFLEREHIKLVSIDSKAIVDGNLKLILGLIWTLI---LHYS 143
+ N + EN+++A+ V+I + + G L+LGL+W +I L
Sbjct: 226 INKQNLSLYRRHENLTLAVNSAGAIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLSD 405
Query: 144 ISMP--------MWEDEDDEDARKQTPKQRLLGWIQNKVPQL----PITNFNRDWQDGKA 191
I++ + + E ED + +P+Q LL W+ + + I NF D +D +A
Sbjct: 406 INLAHHPGLVNLLLDGETIEDLIRLSPEQILLRWVNYHLNRAGCDRQIXNFGEDIKDSEA 585
Query: 192 LGALVDNCAP 201
L+ +P
Sbjct: 586 YTHLLKQISP 615
>32088
Length = 1928
Score = 39.7 bits (91), Expect = 0.015, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Frame = +1
Query: 36 KKIQQNTFTRWCNEHLK----C-----VGKRLTDLQRDLSDGLRLIALLEVLSQKRMYRK 86
K +Q F W N HLK C V + DL + + DG+ L L+ + +
Sbjct: 1255 KDGEQKAFAAWINRHLKDDPDCKHLMEVNEEGDDLFKKVGDGILLCKLINHSVSNTIDER 1434
Query: 87 FHPRPNFR-QMKLENVSVALEFLEREHIKLVSIDSKAIVDGNLKLILGLIWTLIL----- 140
+ N + EN+++A+ V+I + + G L+LGL+W +I
Sbjct: 1435 AINKSNLNVYHRHENLTLAVNSAGSIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLS 1614
Query: 141 ------HYSISMPMWEDEDDEDARKQTPKQRLLGWI 170
H + + E E ED + +P++ LL W+
Sbjct: 1615 DINLAHHPGLVNLLREGETIEDFMRLSPEEILLRWV 1722
>18202
Length = 424
Score = 34.3 bits (77), Expect = 0.64, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = -1
Query: 101 VSVALEFLEREHIKLVSIDSKAIVDGNLKLILGLIWTLILHYSI 144
+ AL+ ++ IK+V ++ I+DG++K +L ++W LIL+Y I
Sbjct: 211 IYAALDHMKNHGIKIV-FSTQDIMDGDIKSLLDVMWLLILNYGI 83
>02928
Length = 1057
Score = 34.3 bits (77), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 729 CSYVPTKPIKHTIIVSWGGVNVPKSPFRVNVGEGSHPERVKVYGPGVEKTGLKANEPTYF 788
C VP +P + + S G +SP V HP R+++ P V K G++ E +YF
Sbjct: 486 CQLVPAEPPEQPVCRSLGAQRH-QSPACV------HPPRLRLSDPAVHKAGVQGQEASYF 644
Query: 789 T 789
T
Sbjct: 645 T 647
>31031
Length = 423
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Frame = +1
Query: 2048 WGKGLSEGQTFQVAEFI---VDTR------NAGYGGLGLSIEGPS---KVDINCEDMEDG 2095
WG GL V F VDT+ + G G +S+ ++ ++ D DG
Sbjct: 19 WGPGLKSHFNVPVRYFYIQAVDTKGNHLTDSVGEGAFQVSVTQNGQRVRMRVDVLDRHDG 198
Query: 2096 TCKVTYCP-TEPGTYIINIKFADKHVPGSPFTVK 2128
V P ++P +++IK D+HV SP+ +K
Sbjct: 199 VYIVRLKPFSDPEHIVVSIKHNDQHVAHSPYQIK 300
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 1673 AAGKGKVTCTVSTPDG--AELDVDVVENHDGTFDIYYT-APEPGKYVITIRFGGEHIPNS 1729
+ G+G +V T +G + VDV++ HDG + + +P V++I+ +H+ +S
Sbjct: 109 SVGEGAFQVSV-TQNGQRVRMRVDVLDRHDGVYIVRLKPFSDPEHIVVSIKHNDQHVAHS 285
Query: 1730 PFHV 1733
P+ +
Sbjct: 286 PYQI 297
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|84490394|ref|NP_038703.3| spectrin beta 1 [Mus
musculus]
(2329 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19002 426 e-119
34010 136 2e-39
26578 150 6e-36
17613 97 1e-35
19147 121 3e-28
29446 92 2e-18
05733 82 3e-15
34417 81 4e-15
28965 80 9e-15
38533 67 1e-10
19246 62 3e-09
09100 56 2e-07
09711 54 6e-07
25051 52 4e-06
22703 51 6e-06
11159 49 2e-05
17567 49 2e-05
32371 37 2e-05
18202 46 2e-04
32088 43 0.002
18556 42 0.003
19732 40 0.013
04951 39 0.019
22686 35 0.35
29521 33 1.5
>19002
Length = 842
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/280 (71%), Positives = 234/280 (83%)
Frame = -2
Query: 84 DGRMLIKLLEVLSGEMLPRPTKGKMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNH 143
DG+ML+KLLEV + KGKMRIHCLENVDKAL FL EQRVHLENMG+HDIVDG+
Sbjct: 841 DGKMLMKLLEVRVRGEIASDXKGKMRIHCLENVDKALTFLHEQRVHLENMGAHDIVDGSS 662
Query: 144 RLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALLLWCQMKTAGYPHVNVTNFTSSWK 203
RL LGLIWTIILRFQIQDI+++ + ET+SAKDALLLWCQMKTAGYP+VNV NFT+SW+
Sbjct: 661 RLTLGLIWTIILRFQIQDIMIEEVDNSETKSAKDALLLWCQMKTAGYPNVNVRNFTTSWR 482
Query: 204 DGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDVAERQLGIIPLLDPEDVFTENPDE 263
DGLAFNA+IHKHRPDL+ +D+L S+A NL++AF VAE +LG+ LL+PEDV E PDE
Sbjct: 481 DGLAFNAIIHKHRPDLVQYDRLHKSSAIQNLQNAFTVAEDKLGLTALLEPEDVNVEYPDE 302
Query: 264 KSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIETEKMIEKYSGLASDLLTWIEQTIS 323
KSIITYVV +YHYFSKMK +V+GKR+GKVID+AI TE IE+Y L SDLL WIEQTI
Sbjct: 301 KSIITYVVTYYHYFSKMKADSVQGKRIGKVIDNAINTENSIEEYETLTSDLLEWIEQTIV 122
Query: 324 VLNSRKFANSLSGVQQQLQAFSTYRTVEKPPKFQEKGNLE 363
+L R+FANSL+GVQQQL AF+TYR VEKPPKF EKGNLE
Sbjct: 121 ILRDRQFANSLTGVQQQLAAFNTYRIVEKPPKFDEKGNLE 2
>34010
Length = 832
Score = 136 bits (342), Expect(3) = 2e-39, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 93/140 (66%)
Frame = +3
Query: 1931 RPRDVSSVELLLKYHQGIKAEINTRAKNFSTCLELGESLLQRQHQASDEIREKLQQVISR 1990
+PRDVS VELL+ HQ +KAEI+ R +NF+ C+ LG LL R+H +E+REKL Q+
Sbjct: 84 KPRDVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLLNRKHYRQEEVREKLIQLTLE 263
Query: 1991 RQEMNDKWEARSDRLHMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHTVDSVEKLIKR 2050
R +M D W+ R + L ++LEV QF+RDA+VAEAWL+AQE Y ++D G T+D+VE LIK
Sbjct: 264 RLDMTDLWKDRWEHLQLILEVYQFARDAAVAEAWLVAQEQYFLNQDLGDTLDAVENLIKS 443
Query: 2051 HEAFEKSTASWAERFAALEK 2070
+ KS + L K
Sbjct: 444 MKPL-KSCCHARRKICCLRK 500
Score = 36.6 bits (83), Expect(3) = 2e-39, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 1903 ADKFRFFSMVRDLLSWMESIIRQIETQERP 1932
+D +RF M DL WM+ IIRQ+ TQE P
Sbjct: 1 SDFYRFMLMAHDLHLWMDDIIRQMNTQENP 90
Score = 31.2 bits (69), Expect(3) = 2e-39, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 2063 ERFAALEKPTTLELK 2077
ERFAALEKPTT E+K
Sbjct: 478 ERFAALEKPTTFEIK 522
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Frame = +3
Query: 1090 PESLPEAEQLLQQHAAIKEEIDAHRDDYHRVKASGEKVIEG----QTDPDYQLLGQRLEG 1145
P + E L+ H ++K EIDA +++ G ++ Q + +L+ LE
Sbjct: 87 PRDVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLLNRKHYRQEEVREKLIQLTLER 266
Query: 1146 LDTDWDALRRMWESRGNTLTQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLAAAEA 1205
LD + +W+ R L L +F +DA AEA L QE + + D+L A E
Sbjct: 267 LD-----MTDLWKDRWEHLQLILEVYQFARDAAVAEAWLVAQEQYFLNQDLGDTLDAVEN 431
Query: 1206 GIRKFEDFLVSMENNRDKILS 1226
I+ + L S + R KI
Sbjct: 432 LIKSMKP-LKSCCHARRKICC 491
>26578
Length = 430
Score = 150 bits (379), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 101/133 (75%)
Frame = +1
Query: 1681 ERRRRLENMYHLFQLKREADDLEQWITEKEMVASSQEMGQDFDHVTMLRDKFRDFARETG 1740
ERR +LE ++ L+ L RE DL QWI EK +VA S + GQD++HV+ML+++F++FAR+T
Sbjct: 1 ERRGKLEEVFKLYTLHREIYDLLQWIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTE 180
Query: 1741 AIGQERVDNVNTIIERLIDAGHSEAATIAEWKDGLNDMWADLLELIDTRMQLLAASYDLH 1800
++GQERV + N I ++LI HS++A+IAEWKD +N+ WADLLELIDTR QLL +S++LH
Sbjct: 181 SMGQERVASANEICDQLIALDHSDSASIAEWKDNVNEAWADLLELIDTRTQLLQSSWELH 360
Query: 1801 RYFYTGTEILGLI 1813
++ Y + L I
Sbjct: 361 KFLYECKDTLERI 399
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Frame = +1
Query: 629 RKAQLEQSKRLWKFFWEMDEAESWIKEKEQIYSSLDYGKDLTSVLILQRKHKAFEDELRG 688
R+ +LE+ +L+ E+ + WI EK + S D G+D V +L+ + K F +
Sbjct: 4 RRGKLEEVFKLYTLHREIYDLLQWIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTES 183
Query: 689 L-DAHLKQIFQEADDMVAQKQFGHPQIETRVKEVSAQWDHLKELAAFRKKDLQDAENFFQ 747
+ + + D ++A I V+ W L EL R + LQ + +
Sbjct: 184 MGQERVASANEICDQLIALDHSDSASIAEWKDNVNEAWADLLELIDTRTQLLQSSWELHK 363
Query: 748 FQGDADD 754
F + D
Sbjct: 364 FLYECKD 384
>17613
Length = 1108
Score = 96.7 bits (239), Expect(2) = 1e-35, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +3
Query: 235 EHAFDVAERQLGIIPLLDPED-VFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKV 293
+H F + L I +LDPED V + PDE+S++ YV ++YH FS + R+ KV
Sbjct: 366 QHCF*HRRKHLDIPRMLDPEDMVNSAKPDERSVMAYVSSYYHAFSGAQQAETAANRICKV 545
Query: 294 IDHAIETEKMIEKYSGLASDLLTWIEQTISVLNSRKFANSLSGVQQQLQAFSTYRTVEKP 353
+ E E+++E+Y LASDLL WI +T L +R N+L G + +L F YR +KP
Sbjct: 546 LKVNQENERLMEEYERLASDLLEWIRRTRPWLENRVTDNTLPGTRHKLDEFRDYRRKQKP 725
Query: 354 PKFQEKGNLEVL 365
P ++ + + L
Sbjct: 726 PSWRTRPSWRTL 761
Score = 74.3 bits (181), Expect(2) = 1e-35, Method: Composition-based stats.
Identities = 52/138 (37%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Frame = +1
Query: 108 MRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQD---IVV 164
MR H + NV+KAL ++ QR G H R I R+ + + +
Sbjct: 4 MRFHKIANVNKALDYIDLQR---GQTGLHRSRRNC*RQRKDDI-----RYDLDNYPQVCH 159
Query: 165 QTQEGRETRSAKDALLLWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDK 224
R T + +++ KTA Y +VNV NF S+KDGLAF ALIH+HRP+LID+
Sbjct: 160 PRHHSRRTHCQRRTVIV-VPAKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPELIDYHS 336
Query: 225 LKDSNARHNLEHAFDVAE 242
L N NL AFD+AE
Sbjct: 337 LSKDNPLENLNTAFDIAE 390
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +2
Query: 354 PKFQEKGNLEVLLFTIQSRMRANNQKVYTPHDGKLVSDINRAWESLEEAEYQRELALRSE 413
PK ++K LE T+Q+R+R +N+ Y P +GK+VSDI AW+ LE AE E L SE
Sbjct: 725 PKLEDKAKLENSFNTLQTRLRLSNRPAYLPTEGKMVSDIANAWKGLEHAEKGFEEWLLSE 904
Query: 414 LIRQEKLEQLARRFDRKAAMRETWLNENQRLVTQDNFG-YDLXXXXXXXXXXXXXXTDTA 472
L R E+L+ LA++F K + E W + ++ +F L +D A
Sbjct: 905 LQRLERLDHLAQKFRHKCEIHEEWSQGKEDMLQSRDFKQCRLNELKAMKKKHEAFESDLA 1084
Query: 473 AYEERV 478
A+++RV
Sbjct: 1085AHQDRV 1102
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 2013 QFSRDASVAEAWLIAQEPYLASRDFGHT-VDSVEKLIKRHEAFEKSTASWAER 2064
+F + E W +E L SRDF ++ ++ + K+HEAFE A+ +R
Sbjct: 941 KFRHKCEIHEEWSQGKEDMLQSRDFKQCRLNELKAMKKKHEAFESDLAAHQDR 1099
>19147
Length = 474
Score = 121 bits (303), Expect(2) = 3e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%)
Frame = +1
Query: 121 QFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALL 180
++ + V L ++G+ +IVDGN ++ LG+IWTIILRF IQDI V E +AK+ LL
Sbjct: 46 SYIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDITV------EELTAKEGLL 207
Query: 181 LWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKL 225
LWCQ KTA Y +VNV NF S+KDGLAF ALIH+HRP+LID+ L
Sbjct: 208 LWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPELIDYHSL 342
Score = 24.6 bits (52), Expect(2) = 3e-28, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 107 KMRIHCLENVDKALQFLKEQR 127
KMR H + NV+KAL+ + QR
Sbjct: 3 KMRFHKIANVNKALELHRLQR 65
>29446
Length = 1445
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Frame = +3
Query: 53 EVVQKKTFTKWVNSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPRPTK-GKMRIH 111
+++QK TFT+W N HL V+ I+DL D DG L+ L+EVLSG+ K R
Sbjct: 993 KIIQKNTFTRWANEHLRTVNKAIADLESDFSDGLRLVALIEVLSGKKFKHVNKRPNFRTQ 1172
Query: 112 CLENVDKALQFLK-EQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGR 170
LENV L+FL+ ++ + + N+ S DIVD +L+LGLIWT+IL + I + + +E
Sbjct: 1173 KLENVTLTLKFLEDDEGIRIVNIDSTDIVDKKLKLILGLIWTLILHYSISMPMWEGEEPT 1352
Query: 171 ETR---SAKDALLLWCQMKTA 188
+ + K LL W Q K
Sbjct: 1353 PSEGGPTPKQRLLNWIQSKVP 1415
>05733
Length = 1021
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Frame = +2
Query: 178 ALLLWCQ--MKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLE 235
+LL WCQ + Y V++ +FTSSW+ GLAF ALIH RP LI L + N +
Sbjct: 467 SLLRWCQRVLNXGTYRGVHIIDFTSSWRSGLAFCALIHAFRPHLISPASLMECETVKNNQ 646
Query: 236 HAFDVAERQLGIIPLLDPEDV-FTENPDEKSIITYVVAFYHYF 277
AFDVA+++LGI P++ ED+ PD+ +++ Y+ F+ F
Sbjct: 647 LAFDVAQKELGIAPVMRGEDMAACAVPDKLTMVAYLSQFHELF 775
>34417
Length = 1096
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +2
Query: 199 TSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDVAERQLGIIPLLDPEDVF- 257
+S W +GLAF ALIH PD D+ +L+ N R+N E AFD AE+ I PLLD ED+
Sbjct: 38 SSCWNNGLAFCALIHHFYPDAFDYSQLQPQNRRYNFELAFDTAEKLADISPLLDVEDMIK 217
Query: 258 TENPDEKSIITYVVAFY 274
+NPD K + TYV +FY
Sbjct: 218 MKNPDWKCVFTYVQSFY 268
>28965
Length = 421
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%)
Frame = +2
Query: 907 VNLAANNLVESGHPRSGEVKQYQDRLNKRWQAFQAVVSEQREAVDSALRVNNYCVDCEET 966
VN A LV GHP ++Q Q+ +N+ W+ + + ++E + A + + D +ET
Sbjct: 41 VNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADET 220
Query: 967 SKWIMDKTKVVESTKDLGQDLAGVIAIQRKLSGLERDVLAIRDRVSALERESQYLMESHP 1026
WI +K V+ ST D G+DLA V +QRK G+ERD+ A+ ++V+AL ES L H
Sbjct: 221 IAWIQEKDAVL-STDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGTESVRLQGIHG 397
Query: 1027 EQKEDI 1032
+Q E I
Sbjct: 398 DQSEQI 415
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +2
Query: 1744 QERVDNVNTIIERLIDAGHSEAATIAEWKDGLNDMWADLLELIDTRMQLLAASYDLHRYF 1803
+++V VNT+ E+L+ GH E TI + ++ +N+ W L +L R + L ++++ R+
Sbjct: 23 EDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFN 202
Query: 1804 YTGTEILGLIDEKHRELP-EDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRL 1862
E + I EK L +D G D ++ ++ R H ER+L L +V + RL
Sbjct: 203 RDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGTESVRL 382
Query: 1863 QTAYAGEKADAIQS 1876
Q + G++++ I S
Sbjct: 383 QGIH-GDQSEQIHS 421
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%)
Frame = +2
Query: 1647 AQSLLSAGHPEGEQIIRLQGQVDKQYAGLKDMAEERRRRLENMYHLFQLKREADDLEQWI 1706
A+ L++ GHPE E I + Q +V++ + L+ ++ R+ RL + + + R+AD+ WI
Sbjct: 53 AEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWI 232
Query: 1707 TEKEMVASSQEMGQDFDHVTMLRDKFRDFARETGAIGQERVDNVNTIIERL 1757
EK+ V S+ + G+D V L+ K R+ A+ +E+V+ + T RL
Sbjct: 233 QEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAAL-EEKVNALGTESVRL 382
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Frame = +2
Query: 1942 LKYHQGIKAEINTRAKNFSTCLELGESLLQRQHQASDEIREKLQQVISRRQEMNDKWEA- 2000
L+ H+ E+NT L E L+ H + IR+K ++E+N+ W+
Sbjct: 11 LQNHEDKVVEVNT----------LAEQLVTDGHPEEETIRQK-------QEEVNEAWKRL 139
Query: 2001 ------RSDRLHMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHTVDSVEKLIKRHEAF 2054
R +RL+ E+ +F+RDA AW+ ++ L++ D+G + SV+ L ++HE
Sbjct: 140 RQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGV 319
Query: 2055 EKSTASWAERFAAL 2068
E+ A+ E+ AL
Sbjct: 320 ERDLAALEEKVNAL 361
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 55/97 (56%)
Frame = +2
Query: 604 DPQVIQDRVSHLEQCFSELSNMAAGRKAQLEQSKRLWKFFWEMDEAESWIKEKEQIYSSL 663
+ + I+ + + + + L ++ R+ +L + + +F + DE +WI+EK+ + S+
Sbjct: 83 EEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTD 262
Query: 664 DYGKDLTSVLILQRKHKAFEDELRGLDAHLKQIFQEA 700
DYG+DL SV LQRKH+ E +L L+ + + E+
Sbjct: 263 DYGRDLASVQTLQRKHEGVERDLAALEEKVNALGTES 373
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +2
Query: 710 GHPQIET---RVKEVSAQWDHLKELAAFRKKDLQDAENFFQFQGDADDLKAWLQDAHRLL 766
GHP+ ET + +EV+ W L++L+ R++ L A +F DAD+ AW+Q+ +L
Sbjct: 74 GHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVL 253
Query: 767 SGEDVGQD 774
S +D G+D
Sbjct: 254 STDDYGRD 277
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%)
Frame = +2
Query: 1524 QNEILGHAPRVEDVLRRGQELVKAAEIDCQDIEERLGHLQSSWDTLREAAAGRLQRLRDA 1583
Q ++ H +V +V ++LV + + I ++ + +W LR+ + R +RL A
Sbjct: 2 QKDLQNHEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGA 181
Query: 1584 HEAQQYYLDAGEAEAWISEQELYVFSDEPPKDEEGAIVMLKRHLRQQRTVEEYGRNIKQL 1643
HE Q++ DA E AWI E++ + +D+ +D + ++H E R++ L
Sbjct: 182 HEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKH-------EGVERDLAAL 340
Query: 1644 AGRAQSLLSAGHPEGEQIIRLQG 1666
+ +L G + +RLQG
Sbjct: 341 EEKVNAL-------GTESVRLQG 388
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 1019 QYLMESHPEQKEDIGQRQADVEKLWKGL-QDALQGQELSLGEASKLQAFLQDLDDFKAWL 1077
Q + + HPE+ E I Q+Q +V + WK L Q +L QE G A ++Q F +D D+ AW+
Sbjct: 59 QLVTDGHPEE-ETIRQKQEEVNEAWKRLRQLSLLRQERLYG-AHEIQRFNRDADETIAWI 232
Query: 1078 SMAQKAVASEDMPESLPEAEQLLQQHAAIKEEIDA 1112
++++D L + L ++H ++ ++ A
Sbjct: 233 QEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAA 337
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 63/133 (47%)
Frame = +2
Query: 470 DTAAYEERVKALEDLAQELEKENYHDQKRIIARKDNILRLWSYXXXXXXXXXXXXXATLA 529
D +E++V + LA++L + + +++ I +++ + W
Sbjct: 8 DLQNHEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHE 187
Query: 530 LQKLFQDMLHSIDWMDEIKAHILSAEFGKHLLEVEDLLQKHKLMEADIAIQGDKVKAITA 589
+Q+ +D +I W+ E A + + ++G+ L V+ L +KH+ +E D+A +KV A+
Sbjct: 188 IQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGT 367
Query: 590 ATLQFAEGKGYQP 602
+++ G Q
Sbjct: 368 ESVRLQGIHGDQS 406
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Frame = +2
Query: 1872 DAIQSKEQEVSAAWQALLDACAGRRAQLVDTADKFRFFSMVRDLLSWMESIIRQIETQER 1931
+ I+ K++EV+ AW+ L R+ +L + RF + ++W++ + T +
Sbjct: 89 ETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDY 268
Query: 1932 PRDVSSVELLLKYHQGIKAEI 1952
RD++SV+ L + H+G++ ++
Sbjct: 269 GRDLASVQTLQRKHEGVERDL 331
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Frame = +2
Query: 1321 ELASHQGWLENIDAEGRQLMAEKPQFKDVVSERLEALHKLWEELQSTAKAKAEQLSAARS 1380
+L +H+ + ++ QL+ + ++ + ++ E +++ W+ L+ + + E+L A
Sbjct: 8 DLQNHEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHE 187
Query: 1381 SDLRLQTHADLN-KWIGAMEDQLRSDDLGKDLTTVNRMLAKLKRVEEQVNLRKEELEELF 1439
R AD WI + L +DD G+DL +V + K + VE + +E++ L
Sbjct: 188 IQ-RFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALG 364
Query: 1440 ADAPSLGAEAGDTDMSI 1456
++ L GD I
Sbjct: 365 TESVRLQGIHGDQSEQI 415
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 28/45 (62%)
Frame = +2
Query: 1483 ISRDLEDETLWVEERLPLAQSADYGTNLQTVQLFMKKNQTLQNEI 1527
+RD ++ W++E+ + + DYG +L +VQ +K++ ++ ++
Sbjct: 197 FNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDL 331
>38533
Length = 380
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Frame = +1
Query: 1487 LEDETLWVE-ERLPLAQSADYGTNLQTVQLFMKKNQTLQNEILGHAPRVEDVLRRGQELV 1545
+EDE W +R P+A+S D G +L VQ MKK+Q L++EI+ H P ++ V Q+++
Sbjct: 1 VEDELSWYY*DRKPIAESTDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQMI 180
Query: 1546 KAAEIDCQDIEERLGHLQSSWDTLREAAAGRLQRLRDA--HEAQQYYLDAGEAEAWISEQ 1603
+ DI+ RL L S R L ++ A AQ++Y++ E E W++E+
Sbjct: 181 RTKHFATADIQTRLDDLTSP--AQRSQVFYLL*KVETAGCFGAQKFYMEVNEVELWMNEK 354
Score = 37.0 bits (84), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Frame = +1
Query: 553 SAEFGKHLLEVEDLLQKHKLMEADIAIQGDKVKAITAATLQFAEGKGYQPCDPQVIQDRV 612
S + G L V++L++KH+ +E++I + A+ + Q K + D IQ R+
Sbjct: 52 STDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQMIRTKHFATAD---IQTRL 222
Query: 613 SHL------EQCFSEL--SNMAAGRKAQLEQSKRLWKFFWEMDEAESWIKEK 656
L Q F L A AQ KF+ E++E E W+ EK
Sbjct: 223 DDLTSPAQRSQVFYLL*KVETAGCFGAQ--------KFYMEVNEVELWMNEK 354
>19246
Length = 440
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +2
Query: 2196 NKKASNRSWNNLYCVLRNSQLTFYKDAKNLALGVPYHGEEP-LALRHAICEIAVNY-KKK 2253
KK S+RSW ++ VLR L KD ++ + + EEP ++++ + +IA +Y +K+
Sbjct: 44 GKKCSDRSWKQVWAVLRGHALFLIKDRRDGSTHPTFSFEEPPISIKSCLVDIAHDYSRKR 223
Query: 2254 KHVFKLRLSNGSEWLFHGKDEEEMLMWLQSMSTAIN 2289
KHVF+L + S +L +D+ M+ W+Q++ T N
Sbjct: 224 KHVFRLTTYSESVYLLQAEDKGTMMSWIQAIKTNNN 331
>09100
Length = 930
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Frame = +1
Query: 56 QKKTFTKWVNSHLARVSCR--ISDLYKDLRDGRMLIKLLEVLSGEMLPR----PTK-GKM 108
Q + W+NS L + I DL D+RDG + ++ ++S + +P PT +M
Sbjct: 463 QLSAYMAWINSQLKKKPGAHLIEDLRHDMRDGVVFADVIHIVSKQQIPGIQNVPTTLDEM 642
Query: 109 RIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQ 158
R +NVD+ L F+ + R+ + + S DIV+GN + V+ LI + ++
Sbjct: 643 R----QNVDRVLHFMTQNRIKMHRISSRDIVEGNLKAVMRLILALAAHYK 780
>09711
Length = 3041
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Frame = +1
Query: 56 QKKTFTKWVNSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEML------PRPTKGKMR 109
++KT+ W+NS VS + LY DL DG ++ +L + + ++ + K K R
Sbjct: 850 EEKTYRNWMNS--LGVSPFVHHLYSDLYDGLIIFQLYDYIQPGLVDWSKVKKKFNKLKAR 1023
Query: 110 IHCLENVDKALQF---LKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQT 166
+EN + A++ +K +V L + DI+DGN L LGL+W ++ + + + T
Sbjct: 1024 FERIENCNYAVELGPQVKLVKVKLVGIAGQDILDGNPVLTLGLVWQLMRAYTLAILSKIT 1203
Query: 167 QEGRETRSAKDALLLWCQMKTAGYPHVNVTNFTS-SWKDGLAFNALIHKHRPDLIDFDKL 225
+ + + + ++ W K ++ F DG+ +I +P ++++D +
Sbjct: 1204 ENNKPI--SDNEIITWVNSKIK--KDDRISGFQDRKLNDGVIVARVIEAIKPGIVNWDNI 1371
Query: 226 KDSNAR------HNLEHAFDVAERQLGIIPLLDPEDVFTENP 261
D +AR N +A +A R++G PED+ P
Sbjct: 1372 -DCSARDYQDRLTNARYAIGLA-RKIGAGVYALPEDIVEVKP 1491
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 102/266 (38%), Gaps = 29/266 (10%)
Frame = +1
Query: 56 QKKTFTKWVNSHLARVS-CR--------ISDLYKDLRDGRMLIKLLEVLSGEMLPRPTKG 106
++K F +W+N HL+ C+ + L+ + DG +L KL+ + T
Sbjct: 52 EQKAFAEWINRHLSDXPDCKHLLPLDADGTQLFGQMADGVLLCKLINHSVSNTIDERTIN 231
Query: 107 KMRIHCL---ENVDKALQFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIV 163
K + EN+ A+ N+G D+ G LVLGL+W II + DI
Sbjct: 232 KQNLSLYRRHENLTLAVNSAGAIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLSDIN 411
Query: 164 VQTQEG-------RET------RSAKDALLLWC--QMKTAGYPHVNVTNFTSSWKDGLAF 208
+ G ET S + LL W + AG + NF KD A+
Sbjct: 412 LAHHPGLVNLLLDGETIEDLIRLSPEQILLRWVNYHLNRAGCDR-QIXNFGEDIKDSEAY 588
Query: 209 NALIHKHRPDL--IDFDKLKDSNARHNLEHAFDVAERQLGIIPLLDPEDVFTENPDEKSI 266
L+ + P + L + E A++ +G + DV + N +K
Sbjct: 589 THLLKQISPPSAGVTLSPLSVGDVHQRAECMLQEADK-IGCRSFVGASDVVSGN--QKLN 759
Query: 267 ITYVVAFYHYFSKMKVLAVEGKRVGK 292
+ +V ++ + + VE + V K
Sbjct: 760 LAFVANLFNNYPALDTPQVEVEDVMK 837
>25051
Length = 1017
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Frame = -2
Query: 2175 DLGHTVQME-GYLGRKHDLEGPNKKA--SNRSWNNLYCVLRNSQLTFYKDAKNLALGVPY 2231
D TV+ + GY+ RK +E +K R W +Y +LR+ L YKD + G
Sbjct: 932 DPSKTVEYKKGYVMRKSCMEPGRRKTPFGKRGWRMVYTILRDLILYQYKDEHQVKKGQFV 753
Query: 2232 HGEEPLA-LRHAICEIAVNYKKKKHVFKLRLSNGSEWLFHGKDEEEMLMWLQSMSTAINE 2290
+ + + HA+ A +Y KK+HVF+L+ ++ +E+LF E+ W+ +++
Sbjct: 752 ESSQNVVRIHHALATKASDYTKKQHVFRLQTADWAEYLFQTGGTIELQEWIDTINL---- 585
Query: 2291 SQSIRVKAQSLPLP 2304
+ S PLP
Sbjct: 584 ---VAATLSSPPLP 552
>22703
Length = 906
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%)
Frame = -3
Query: 1959 FSTCLELGESLLQRQHQASDEIREKLQQVISRRQEMNDKWEARSDRLHMLLEVCQFSRDA 2018
F + G S + H S EI EK++Q+ + + E R LE Q +
Sbjct: 880 FDKFRKTGRSFIANGHFLSKEIEEKIKQLDQSLEGLIRNLEHRRKLHQQNLEAQQLRHEM 701
Query: 2019 SVAEAWLIAQEPYLASRDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEK 2070
EAW+ +EP L + FG +++ E++++RH+ F K+ + +R AL++
Sbjct: 700 EQIEAWMNLREPLLKEKKFGESIEGAEEMLRRHD*F*KTVTAQEDRVNALQR 545
>11159
Length = 520
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 2202 RSWNNLYCVLRNSQLTFYKDAKNLALG-VPYHGEEPLALRHAICEIAVNYKKKKHVFKLR 2260
RSW + LR+ L +KD + + + + HA+ +A +Y KK+HVF+L+
Sbjct: 65 RSWKMFFITLRDLVLYLHKDEHGFRKSQMSDNLHNAIRIHHALATMANDYTKKQHVFRLQ 244
Query: 2261 LSNGSEWLFHGKDEEEMLMWLQSMS 2285
++ +E+LF D +E+ W+++++
Sbjct: 245 TADQAEYLFQTSDSKELHSWVETIN 319
>17567
Length = 448
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 67/139 (48%)
Frame = -3
Query: 530 LQKLFQDMLHSIDWMDEIKAHILSAEFGKHLLEVEDLLQKHKLMEADIAIQGDKVKAITA 589
L +F+++ + + E+++ ++ ++GKHL +D+L++H L EA + +V+ +
Sbjct: 392 LMAMFREIESIQEELKEVQSKVVGEDYGKHLQATQDMLEQHSLQEAQLQALTRRVRKLNR 213
Query: 590 ATLQFAEGKGYQPCDPQVIQDRVSHLEQCFSELSNMAAGRKAQLEQSKRLWKFFWEMDEA 649
+ Q Q + R+ L + + + R+ LE +++ ++F + +E
Sbjct: 212 KS---------QGAQEQSLDKRLEALNAQLNNVQAQSDKRRQGLETAQQYYQFLQDTEEE 60
Query: 650 ESWIKEKEQIYSSLDYGKD 668
+ W+ E+ S GKD
Sbjct: 59 DRWVGERIDAVRSPSLGKD 3
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 75/146 (51%)
Frame = -3
Query: 629 RKAQLEQSKRLWKFFWEMDEAESWIKEKEQIYSSLDYGKDLTSVLILQRKHKAFEDELRG 688
RK+ L L F E++ + +KE + DYGK L + + +H E +L+
Sbjct: 422 RKSTLSGYNNLMAMFREIESIQEELKEVQSKVVGEDYGKHLQATQDMLEQHSLQEAQLQA 243
Query: 689 LDAHLKQIFQEADDMVAQKQFGHPQIETRVKEVSAQWDHLKELAAFRKKDLQDAENFFQF 748
L ++++ +++ AQ+Q ++ R++ ++AQ ++++ + R++ L+ A+ ++QF
Sbjct: 242 LTRRVRKLNRKSQG--AQEQ----SLDKRLEALNAQLNNVQAQSDKRRQGLETAQQYYQF 81
Query: 749 QGDADDLKAWLQDAHRLLSGEDVGQD 774
D ++ W+ + + +G+D
Sbjct: 80 LQDTEEEDRWVGERIDAVRSPSLGKD 3
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -3
Query: 1350 VSERLEALHKLWEELQSTAKAKAEQLSAARSSDLRLQTHADLNKWIGAMEDQLRSDDLGK 1409
+ +RLEAL+ +Q+ + + + L A+ LQ + ++W+G D +RS LGK
Sbjct: 185 LDKRLEALNAQLNNVQAQSDKRRQGLETAQQYYQFLQDTEEEDRWVGERIDAVRSPSLGK 6
Query: 1410 D 1410
D
Sbjct: 5 D 3
>32371
Length = 625
Score = 37.0 bits (84), Expect(2) = 2e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 217 PDLIDFDKLKDSNARHNLEHAFDVAERQLGIIPLLDPED-VFTENPDE 263
PDLID+D L N +N AF VAE++L I L+ D V PD+
Sbjct: 549 PDLIDYDSLSKENVLYNNNLAFTVAEQELDIPAFLEAADMVALRTPDK 406
Score = 31.2 bits (69), Expect(2) = 2e-05, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 193 VNVTNFTSSWKDGLAFNALIHKHR 216
V++ + SW++GLAF A+IH+ R
Sbjct: 622 VDIKDLLVSWRNGLAFCAIIHRFR 551
>18202
Length = 424
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Frame = -1
Query: 58 KTFTKWVNSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPRPTKGKMRIHCLENVD 117
+ + W NS L V+ + ++ +++GR+L +L++VL+ P G +
Sbjct: 385 QVYLSWANSVLCEVNSSVENV-SSIQEGRVLCELIDVLA------PEAGLLDKVQASGKS 227
Query: 118 KALQFLKEQRVHLENMG------SHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRE 171
F+ H++N G + DI+DG+ + +L ++W +IL + I I + + R
Sbjct: 226 GQRAFIYAALDHMKNHGIKIVFSTQDIMDGDIKSLLDVMWLLILNYGIHFIGNNSFQ-RS 50
Query: 172 TRSAKDALLLWCQ 184
+ K LL WCQ
Sbjct: 49 VGAGKKNLLDWCQ 11
>32088
Length = 1928
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 17/143 (11%)
Frame = +1
Query: 56 QKKTFTKWVN---------SHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPRPTKG 106
++K F W+N HL V+ DL+K + DG +L KL+ +
Sbjct: 1264 EQKAFAAWINRHLKDDPDCKHLMEVNEEGDDLFKKVGDGILLCKLINHSVSNTIDERAIN 1443
Query: 107 KMRI---HCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIV 163
K + H EN+ A+ N+G D+ G LVLGL+W II + DI
Sbjct: 1444 KSNLNVYHRHENLTLAVNSAGSIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLSDIN 1623
Query: 164 VQTQEG-----RETRSAKDALLL 181
+ G RE + +D + L
Sbjct: 1624 LAHHPGLVNLLREGETIEDFMRL 1692
>18556
Length = 799
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 178 ALLLWCQMKTAGYPHV-NVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEH 236
+LL W ++ A Y + + +++G ALI + RPDLID+ KD + E
Sbjct: 44 SLLRWISVQLAAYQFTAELKEPSDVFRNGRVLCALISRFRPDLIDYAATKDMSPLECNEL 223
Query: 237 AFDVAERQLGI 247
AF V ER+L I
Sbjct: 224 AFAVLERELHI 256
>19732
Length = 2338
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Frame = -2
Query: 2196 NKKASNRSWNNLYCVLRNSQLTFY------KDAKNLALGVPYHGEEPLALRHAICEIAVN 2249
N W +Y VLR+ L + K + + LG GE+ + R A
Sbjct: 1728 NDPFKGHVWKPVYVVLRDFMLCVFANKTDSKPQQYVRLG----GEQCVGCRLA------T 1579
Query: 2250 YKKKKHVFKLRLSNGSEWLFHGKDEEEMLMWLQSMSTAINESQSIRVKAQSLPLPSLA 2307
+++ + ++ L+ G W EEE+ W QS+ A++E LP S+
Sbjct: 1578 SQERSYCIEIILATGGSWFLSVPTEEEVASWRQSLCLAVSEGMQDSSNLTCLPCVSVV 1405
>04951
Length = 2852
Score = 39.3 bits (90), Expect = 0.019, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Frame = +1
Query: 113 LENVDKALQF---LKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEG 169
+EN + A+Q +K ++ L +G DI DGN L LGL+W ++ + + + T++
Sbjct: 7 IENCEYAVQLGPQMKVCKMKLVGIGGKDIHDGNPVLTLGLVWQLMRAYTLAILSKLTEDK 186
Query: 170 RETRSAKDALLLWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSN 229
+ + ++ ++ W K + S DG+ +I +P +++++ + + N
Sbjct: 187 KPIQDSE--IVDWVNSKVKKDERIGSFQ-DSKLNDGVIVAKVIESIKPGIVNWENI-NPN 354
Query: 230 ARH------NLEHAFDVAERQLGIIPLLDPEDVFTENP 261
A N +A +A R++G PED+ P
Sbjct: 355 ASEPDDRLANARYAIGLA-RKIGAGVYALPEDIVEVKP 465
>22686
Length = 934
Score = 35.0 bits (79), Expect = 0.35, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +1
Query: 2166 EPTTLPAQRDLGHTVQMEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSQLTFYKDAKNL 2225
+P LP+ R + H+++ + KH +GP +A NR+W N +L F KN
Sbjct: 553 QPAQLPSPRXVAHSLESVKFC--KHKEKGPTHEALNRNWQNEISILLLDFRNFGTKRKNE 726
Query: 2226 ALGVPYHGEEPLALRHAIC 2244
+ L+H +C
Sbjct: 727 TKKTGQD*VHCVKLQHVVC 783
>29521
Length = 903
Score = 33.1 bits (74), Expect = 1.5, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 2178 HTVQMEGYLGRKHDLEGPNKKASNR--SWNNLYCVLRNSQLTFYKDAKNL-ALGVP 2230
H V + R+ + G K NR +W+ YC+L+++ L +YK+ +L ALG P
Sbjct: 273 HNVGLPALEVRRPECTGYLLKVGNRRRTWHRRYCILKDACLYYYKNMNSLSALGWP 440
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|29293809|ref|NP_598798.1| ATP citrate lyase [Mus
musculus]
(1091 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
37263 422 e-118
20406 177 3e-44
25088 60 2e-13
10791 32 1.4
19377 30 3.6
01159 30 4.8
>37263
Length = 743
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 194/247 (78%), Positives = 224/247 (90%)
Frame = +3
Query: 830 FMTSICDERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQRRLPKYSCQFIEMCLMVTAD 889
FMTSICDERGQELIYAGMPI+EV +++GIGGV+ LLWFQR LP Y C+F EMCLMVTAD
Sbjct: 3 FMTSICDERGQELIYAGMPISEVLNKDVGIGGVISLLWFQRCLPPYVCKFFEMCLMVTAD 182
Query: 890 HGPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEF 949
HGPAVSGAHNTI+CARAGKDLVSS+ SGLLTIGDRFGGALD +A+ FS+A+D+ + PMEF
Sbjct: 183 HGPAVSGAHNTIVCARAGKDLVSSVVSGLLTIGDRFGGALDGSARQFSEAYDTNLHPMEF 362
Query: 950 VNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDYALEVEKITTSKKP 1009
VNKM+KEGKLI+GIGHRVKSINNPD+RV+I+K+FV ++FP PLL YALEVEKITT+KKP
Sbjct: 363 VNKMRKEGKLILGIGHRVKSINNPDVRVKIIKEFVMENFPQCPLLKYALEVEKITTTKKP 542
Query: 1010 NLILNVDGFIGVAFVDMLRNCGSFTREEADEYVDIGALNGIFVLGRSMGFIGHYLDQKRL 1069
NLILNVDG I AFVDMLRN GSFT EEA EY+++GA+N +FVLGRS+GFIGHY+DQKRL
Sbjct: 543 NLILNVDGVIATAFVDMLRNSGSFTSEEAQEYINVGAINSLFVLGRSIGFIGHYMDQKRL 722
Query: 1070 KQGLYRH 1076
KQGLYRH
Sbjct: 723 KQGLYRH 743
>20406
Length = 444
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/134 (70%), Positives = 108/134 (80%)
Frame = +2
Query: 306 EYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQ 365
EYSGAPSEQQTY+YAKT+LSLMT + P GKILIIGG IANFTNVA TFKGIVRA++++Q
Sbjct: 2 EYSGAPSEQQTYEYAKTVLSLMTEQVDPRGKILIIGGGIANFTNVATTFKGIVRALQEFQ 181
Query: 366 GPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALGHRPIP 425
G L E +V ++VRR GPNYQEGLR+M E+ + G+PIHVFG ETHMTAIV MALG R IP
Sbjct: 182 GKLIEGKVVVYVRRAGPNYQEGLRIMRELSSSLGVPIHVFGPETHMTAIVSMALGKRDIP 361
Query: 426 NQPPTAAHTANFLL 439
P TANFLL
Sbjct: 362 TTPKALPTTANFLL 403
>25088
Length = 1646
Score = 60.5 bits (145), Expect(2) = 2e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Frame = +1
Query: 541 PVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEA-LTRKL 599
PVF ++ +A+ K D + F A + +E ++ A+I + I EGIP+ + R
Sbjct: 253 PVFNSVQEAVDK-TGADATVIFVPPPFAAAAILEAID-AEISLVVCITEGIPQQDMVRVK 426
Query: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659
+ Q +IGP G IKPG KIG I+ +++ G + VSRSG ++ E
Sbjct: 427 HRLVRQNKTRLIGPNCPGIIKPGEIKIG--------IMPGHIHQKGKIGIVSRSGTLTYE 582
Query: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMD 689
+ ++ G V IGGD + G+ F+D
Sbjct: 583 AVHQTTQVGLGQSLCVGIGGDPFNGTNFID 672
Score = 34.7 bits (78), Expect(2) = 2e-13, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +3
Query: 698 PGVKMIVVLGEIGGTEEYKICRGIKE---GRLTKPVVCWCIGTCATMFSSEVQFGHAGAC 754
P + IV++GEIGG E +K G KPVV + G A + GHAGA
Sbjct: 696 PQTEGIVLIGEIGGQAEENAADYLKNHNTGPKAKPVVSFIAGLTA---PPGRRMGHAGAI 866
Query: 755 ANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDL 794
A K ++LK AGV V S +LG + E +
Sbjct: 867 IAGGKGGANEKIESLKSAGVEVSMSPAQLGTTMLQAMEKM 986
>10791
Length = 808
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 849 ITEVFKEEMGIGGVLGLLWFQRRLPKYSCQF 879
+T+ E+ G +L LW QR+LP ++C++
Sbjct: 393 VTKTHFEKQKGGQILNKLWIQRKLPSFNCRY 485
>19377
Length = 707
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 853 FKEEMGIGGVLGLLWFQRRLPKYSCQF 879
F+++ G G +L +W QR+LP ++C++
Sbjct: 473 FEKQKG-GQILNKIWIQRKLPSFNCRY 550
>01159
Length = 2613
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 256 LDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSD--TICDLGGVN 299
L AKS AS+ T L PKG MV+G G V +D TI D+ V+
Sbjct: 207 LAAKSVASILKTSLGPKGLDKMMVSGDGDVTVTNDGATILDMMDVD 344
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|45598396|ref|NP_035288.2| protein kinase, cAMP
dependent regulatory, type II beta [Mus musculus]
(416 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08195 419 e-118
27710 137 7e-33
18204 98 7e-21
20517 46 3e-05
27148 30 2.5
27853 30 2.6
>08195
Length = 2165
Score = 419 bits (1078), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/420 (51%), Positives = 277/420 (65%), Gaps = 9/420 (2%)
Frame = -3
Query: 1 MSIEIPAGLTELLQGFTVEVLRHQPADLLEFALQHFTRLQQENER-------KGAARFGH 53
MS +IP GLTELLQ FTV LR +P+DL++FA +F RL+ N G RF
Sbjct: 2031 MSFDIPPGLTELLQEFTVAALRERPSDLVDFAASYFNRLRLLNGDAVDPKCFTGGVRFSQ 1852
Query: 54 EGRTWGDXXXXXXXXIPSKGVNFAEEPMRSDSXXXXXXXXXXXXXXXXPVIN--RFTRRA 111
G I + FA+ D P N RF RR
Sbjct: 1851 TG-----------SHILAHNGTFAQNNSDDDEAMLEP-----------PPSNTARF-RRK 1741
Query: 112 SVCAEAYNPDEEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEK 171
SV AEAYNP+ +ED E++I++PK+D QR RL + K+ILLF++LDPEQM +VLDAMFEK
Sbjct: 1740 SVSAEAYNPETDEDGGEAKIVNPKSDIQRQRLADVVKNILLFRSLDPEQMQEVLDAMFEK 1561
Query: 172 LVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRA 231
V+ GEH+IDQGDDGDNFYVID GT+DIYV +G + VGNYDN G FGELALMYN PRA
Sbjct: 1560 SVQPGEHIIDQGDDGDNFYVIDSGTYDIYVDVEGQAKLVGNYDNSGFFGELALMYNMPRA 1381
Query: 232 ATITATSPGALWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVVDVIG 291
ATI A+S G +W LDR TFRRI++K +KRK YES +ES+P LKSL++ ER+ V D +
Sbjct: 1380 ATIIASSTGTIWALDRTTFRRIVLKTAFQKRKKYESLLESVPLLKSLDLYERMNVADALQ 1201
Query: 292 TKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYFGEL 351
T+ Y DG QII QGD AD + VESG+V+I M K +S G ++ +G YFGEL
Sbjct: 1200 TRTYEDGVQIIKQGDAADVMYFVESGQVRIAMTNK-ESTDPSAGETDVTVLEKGGYFGEL 1024
Query: 352 ALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVALFGTNMDI 411
AL+T++PRAASA+A GTVKC +DV AFERL+GPCM+++KRNI Y+ Q+ ++FG ++ +
Sbjct: 1023 ALITHQPRAASAYAQGTVKCAVLDVHAFERLMGPCMDVLKRNIDDYDSQISSIFGKSVSM 844
>27710
Length = 429
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 93/141 (65%)
Frame = +2
Query: 177 EHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITA 236
E++I QGD+GDNFYVID G D++V + V GSFGELAL+Y TPRAAT+ A
Sbjct: 2 ENIIQQGDEGDNFYVIDVGEVDVFVNSE----LVTTISEGGSFGELALIYGTPRAATVRA 169
Query: 237 TSPGALWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVVDVIGTKVYN 296
S LWG+DR ++RRI++ + +KRKMYE F+ + L+SL+ ERL V D + T ++
Sbjct: 170 KSDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRVSILESLDKWERLTVADSLETCAFD 349
Query: 297 DGEQIIAQGDLADSFFIVESG 317
DGE I+ QG D F+I+ G
Sbjct: 350 DGETIVKQGAAGDDFYIILEG 412
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = +2
Query: 299 EQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYFGELALVTNKP 358
E II QGD D+F++++ GEV + + + + + E G+ FGELAL+ P
Sbjct: 2 ENIIQQGDEGDNFYVIDVGEVDVFVNSELVTTISEGGS-----------FGELALIYGTP 148
Query: 359 RAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQL 401
RAA+ A VK +D ++ R+L I KR + YEE L
Sbjct: 149 RAATVRAKSDVKLWGIDRDSYRRILMGST-IRKRKM--YEEFL 268
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 126 DAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDD 185
D+ RI+ T +R +E + + ++LD + V D++ +GE ++ QG
Sbjct: 203 DSYRRILMGSTIRKRKMYEEFLSRVSILESLDKWERLTVADSLETCAFDDGETIVKQGAA 382
Query: 186 GDNFYVIDRG 195
GD+FY+I G
Sbjct: 383 GDDFYIILEG 412
>18204
Length = 429
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 85/148 (57%)
Frame = -1
Query: 218 SFGELALMYNTPRAATITATSPGALWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKS 277
+FGELA++YN R A++ A + +W LDR F+ I++K ++R+ F++S+ L+
Sbjct: 429 AFGELAILYNCTRTASVKAVTDVKVWVLDRQMFQAIMMKTGLQRREENIRFLKSVSVLRD 250
Query: 278 LEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAV 337
L + K+ DV+ +++GE II +G D+FF++ GEV++T G E +
Sbjct: 249 LPSDKLAKIADVLEIDFFHEGEFIIREGCTGDTFFLINKGEVRVTQTVAGHEEPQ----- 85
Query: 338 EIARCFRGQYFGELALVTNKPRAASAHA 365
EI + RG YFGE AL+ R AS A
Sbjct: 84 EIRKLKRGDYFGEKALLGEDRRTASCIA 1
>20517
Length = 749
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
Frame = +3
Query: 184 DDGDNFYVIDRGTFDI--YVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGA 241
D +FY I GT + + + R + D SFGELA++ + R AT++ +
Sbjct: 6 DPPRSFYFILSGTVVVTQFERQYSTTRTLVTLDQGMSFGELAVITGSRRQATVSTMTEVE 185
Query: 242 LWGLDRVTFRRIIVKNNAKKRKM-----YESFIESLPFLKSLEVSERLKVVDVIGTKVYN 296
L + F I + A RK+ + F+ S+ FLK+ V + + +N
Sbjct: 186 LLCISAKDFEDIFM---AGGRKIITDPDHNKFLRSVDFLKAWPVQQLAQHPHACMFHYFN 356
Query: 297 DGEQIIAQGDLADSFFIVESGEVKITMK-----------RKGKSEVEE 333
G+ ++ + +D +IV+SG + + K +GKSEV E
Sbjct: 357 RGQVLVRDSNNSDWIYIVKSGSLSVMKKLHHATATDRHSTEGKSEVAE 500
>27148
Length = 718
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 205 GVGRCVGNYDNRGSFGELALMYNTPRAATITA 236
GV + V Y+ SFGELA+M T R +T+ +
Sbjct: 314 GVAKTVMYYNRGDSFGELAIMNATRRQSTVIS 219
>27853
Length = 864
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 167 AMFEKLVKEGEHVIDQGDDGDNFYVIDRGTF-DIYVKCDGVGRCVGNYDNRGSFGELALM 225
A+ ++ + G+ + QGD+ D+ Y++ G + G VG Y G + ++
Sbjct: 215 ALDWQMTEAGKALFRQGDNSDSVYIVLTGRLRSVITLLGGKKEVVGEYGRGELVGIVEVL 394
Query: 226 YNTPRAAT 233
+T RA T
Sbjct: 395 THTERATT 418
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981588|ref|NP_598587.2| ATPase, H+ transporting,
lysosomal V1 subunit H [Mus musculus]
(483 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
15926 360 e-116
13491 187 6e-48
26430 178 3e-45
33274 28 5.6
>15926
Length = 2059
Score = 360 bits (925), Expect(2) = e-116, Method: Compositional matrix adjust.
Identities = 180/349 (51%), Positives = 242/349 (69%), Gaps = 2/349 (0%)
Frame = -2
Query: 79 NLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKSTAWPYFLPMLNRQDPFTV 138
+L+ I+K+QT+QYILT++DD LQE+ RV IF +YA++ K + W F +L R D F V
Sbjct: 2055 SLIDKIAKDQTLQYILTLLDDALQEDPSRVEIFREYARKRKESVWQPFFQLLERSDLFIV 1876
Query: 139 HMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTISSSDSSQYV 198
H ++RI+AK+A W KE ME L Y W++ QL +++Y
Sbjct: 1875 HQSSRIVAKIACWSKESMEKKSLQSYLIWLRDQLRLT------------------NNEYQ 1750
Query: 199 QCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSN--KCGFQLQYQMIFSIWLLAFSPQM 256
VA CLQ+M+R + YR +VE DG+ I VL+N K GFQ+ YQ++F +W L+F+P++
Sbjct: 1749 STVARCLQMMVRNDIYRXVFVEVDGIAVISSVLANSEKIGFQMVYQLVFCLWCLSFNPRV 1570
Query: 257 CEHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLK 316
E + N+IP L+ IL + +EKVTRIILA FRN L K E Q+YAL+M++ KV+K
Sbjct: 1569 AEQMSGMNLIPGLTYILGSTQREKVTRIILALFRNMLSKPEENTVIQDYALSMVRHKVVK 1390
Query: 317 QLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFW 376
QLE LE +K++D D+ EDI ++ +KL SV DLSSFDEY SE+KSG LEWSPVHK+++FW
Sbjct: 1389 QLELLEARKWEDPDLEEDITWISQKLESSVHDLSSFDEYVSEVKSGNLEWSPVHKTDRFW 1210
Query: 377 RENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGK 425
RENA+RLNE NYELLKIL +LLE S D VL+VAAHD+GEYVR+YPRGK
Sbjct: 1209 RENAMRLNEHNYELLKILVRLLETSRDALVLSVAAHDIGEYVRYYPRGK 1063
Score = 77.4 bits (189), Expect(2) = e-116, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = -1
Query: 422 PRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQPQT 478
PR + +IEQLG KQ VM ++ HED VRY AL+AVQKLMVHNWEYLG+++ +QP++
Sbjct: 1072 PR-QNIIEQLGAKQRVMQYLTHEDPNVRYEALIAVQKLMVHNWEYLGRKMTEDQPKS 905
>13491
Length = 465
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 102/119 (85%)
Frame = -1
Query: 360 KSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVR 419
KSG LEWSPVHK+++FWRENA+RLNE NYELLKIL +LLE S D VL+VAAHD+GEYVR
Sbjct: 465 KSGNLEWSPVHKTDRFWRENAMRLNEHNYELLKILVRLLETSRDALVLSVAAHDIGEYVR 286
Query: 420 HYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQPQT 478
+YPRGK +IEQLG KQ VM ++ HED VRY AL+AVQKLMVHNWEYLG+++ +QP++
Sbjct: 285 YYPRGKNIIEQLGAKQRVMQYLTHEDPNVRYEALIAVQKLMVHNWEYLGRKMTEDQPKS 109
>26430
Length = 404
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 108/134 (80%)
Frame = +3
Query: 252 FSPQMCEHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQ 311
F+ + E + R N+IPVL+DIL + +EKVTRI+LA FRN LEK ER QEYALA+++
Sbjct: 3 FNNALVERMNRMNLIPVLADILSSTQREKVTRIVLALFRNMLEKPAERSVTQEYALALVR 182
Query: 312 CKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHK 371
CKV+KQLE L+ +K++D D+ EDIK++ KL SVQDLSSFDEY SE+KSG LEWSPVH+
Sbjct: 183 CKVVKQLELLDARKWEDPDLEEDIKWIAAKLESSVQDLSSFDEYVSEVKSGNLEWSPVHR 362
Query: 372 SEKFWRENAVRLNE 385
+++FWRENA+RLN+
Sbjct: 363 TDRFWRENAIRLND 404
>33274
Length = 574
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 116 KRSKSTAWPYFLPMLNRQDPFTVHMAARIIAKLAAWGKEL 155
K +KST+ +P L + P +HMA ++ AWG ++
Sbjct: 373 KVTKSTSMXPTMPRLLQASPTCLHMALKMAGSTDAWGTDI 254
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981925|ref|NP_033562.2| tyrosine
3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
polypeptide [Mus musculus]
(255 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12344 412 e-116
13465 236 5e-63
33715 175 2e-44
17028 124 3e-29
15092 108 2e-24
27988 59 7e-16
18027 28 3.3
01750 27 6.4
>12344
Length = 1658
Score = 412 bits (1058), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/254 (81%), Positives = 224/254 (88%), Gaps = 1/254 (0%)
Frame = +2
Query: 1 MDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASW 60
M DRED VYQAK +AERYDEMV+ MK VA MDVELTVEERNLLSVAYKNVIGARRASW
Sbjct: 56 MGDREDQVYQAKQLNRAERYDEMVKFMKIVACMDVELTVEERNLLSVAYKNVIGARRASW 235
Query: 61 RIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVQDKHLIPAANTGESKVF 120
RI+SS+EQKE+ EDK + +EYR +E ELK IC D+LD+ +KHLI ANTGESKVF
Sbjct: 236 RIVSSLEQKEDK--CEDKKAINKEYRMKIEKELKDICEDVLDILEKHLIVNANTGESKVF 409
Query: 121 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVF 180
YYKMKGDYHRYLAEFA GNDRKEAAENSLVAYKAASDIAM EL PTHPIRLGLALNFSVF
Sbjct: 410 YYKMKGDYHRYLAEFAVGNDRKEAAENSLVAYKAASDIAMIELAPTHPIRLGLALNFSVF 589
Query: 181 YYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGD-G 239
YYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQG+ G
Sbjct: 590 YYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGEGG 769
Query: 240 EEQNKEALQDVEDE 253
EEQ+ + +QD+E E
Sbjct: 770 EEQSTQQVQDIEGE 811
>13465
Length = 596
Score = 236 bits (603), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 131/153 (85%)
Frame = +2
Query: 1 MDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASW 60
M DR+D VYQAKLAEQAERYDEMVE+MKKVA M +LTVEERNLLSVAYKNVIGARRASW
Sbjct: 110 MTDRDDFVYQAKLAEQAERYDEMVEAMKKVASMGNDLTVEERNLLSVAYKNVIGARRASW 289
Query: 61 RIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVQDKHLIPAANTGESKVF 120
RI+SS+EQK+ +K DK KM + YRQ +ETELK IC D+L + D HLIP+ GESKVF
Sbjct: 290 RIVSSVEQKDLDKPDPDKGKMTKGYRQQIETELKQICEDVLKIIDDHLIPSTTQGESKVF 469
Query: 121 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYK 153
YYKMKGDY+RYLAEFATG+ RKEAAE+SLVAYK
Sbjct: 470 YYKMKGDYYRYLAEFATGDPRKEAAESSLVAYK 568
>33715
Length = 434
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/119 (71%), Positives = 95/119 (79%)
Frame = -1
Query: 123 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 182
KMKGDY+RYL+E + G RKE S+ AYK A+D+A L THPIRLGLALNFSVF+Y
Sbjct: 371 KMKGDYYRYLSEVSQGEQRKENVGKSMEAYKEATDMAKERLSSTHPIRLGLALNFSVFHY 192
Query: 183 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEE 241
EI N PD ACRLAK AFD+AI LD L+EESYKDSTLIMQLLRDNLTLWTSD QG+G E
Sbjct: 191 EIKNCPDEACRLAKIAFDEAIQCLDQLNEESYKDSTLIMQLLRDNLTLWTSDSQGEGTE 15
>17028
Length = 1078
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Frame = +1
Query: 142 KEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 201
+EA + AY A ++A + PTHP RLGLALN+SVFYYEILNS D+AC LAK AFD+
Sbjct: 28 QEAVTKAQEAYNKAMEVAKQSMAPTHPNRLGLALNYSVFYYEILNSQDKACDLAKTAFDE 207
Query: 202 AIAELDTLSE-ESYKDSTLIMQLLRDNLTLWTSDMQG-DGEEQNK 244
AI E+D E + KDSTLIMQLLRDNLTLWTSD +G++Q++
Sbjct: 208 AIQEMDQCGERDDCKDSTLIMQLLRDNLTLWTSDSNAENGDDQDR 342
>15092
Length = 692
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Frame = +3
Query: 1 MDDREDLVYQAKLAEQAERYDEMVESMKKV------AGMDVELTV--EERNLLSVAYKNV 52
+ +E V+ AK+AEQAERYD+M ESM K A D T+ EERNLLSVAYKNV
Sbjct: 222 LSPKERQVHAAKIAEQAERYDDMAESMHKCVVEGYSANGDKSSTLDNEERNLLSVAYKNV 401
Query: 53 IGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDIL 101
+GARR++WR+ISSIEQK EN + KL+M ++YR+ VE ELK IC +L
Sbjct: 402 VGARRSAWRVISSIEQKTEN--NDKKLEMAKKYREKVEKELKEICTQVL 542
>27988
Length = 448
Score = 58.9 bits (141), Expect(2) = 7e-16, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = +3
Query: 44 LLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDV 103
L SVAYKNV+GARR+SWR+I IEQK E + ++K R +R+ VE EL C ++L +
Sbjct: 276 LFSVAYKNVVGARRSSWRVICMIEQKAETQPRKEK---ARAFRKDVEKELDATCNEVLKL 446
Score = 41.6 bits (96), Expect(2) = 7e-16, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +2
Query: 5 EDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEER 42
+DL+ AKLAEQAERYD+M ++MKKV D L E R
Sbjct: 158 KDLISFAKLAEQAERYDDMAKAMKKVTENDKTLMQESR 271
>18027
Length = 448
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 211 EESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEALQD 249
EE + +T+ +Q + D L WT ++G+G E ++ A++D
Sbjct: 307 EEQFGKNTISLQYVPDLLACWTLHVRGEGGE-DRHAIED 420
>01750
Length = 1886
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 20 YDEMVESMKKVAGMDVELT--VEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 77
Y E E+ K A DV + V ++N YK V+ AR W++ SIE+ K ED
Sbjct: 440 YKEKGETPPKRA-FDVAVKEWVVQQNSNRPVYKTVV-ARPVDWKV-PSIERMWLGKSDED 610
Query: 78 KLKMIREYRQMVETELKLI 96
K + +R + ++ ++ L+
Sbjct: 611 KNRRLRAFLTIMHSDSNLV 667
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|55741703|ref|NP_598555.1| glutaminyl-tRNA synthetase
[Mus musculus]
(775 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05674 416 e-116
16782 30 2.9
>05674
Length = 1437
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/292 (68%), Positives = 235/292 (80%)
Frame = -1
Query: 483 EYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVT 542
EYGRLNLHYAVVSKRKI +L+ G VR+WDDPRLFTLTALRRRGFP EAIN FCA+VGVT
Sbjct: 1437 EYGRLNLHYAVVSKRKIGKLITEGFVRNWDDPRLFTLTALRRRGFPSEAINYFCAKVGVT 1258
Query: 543 VAQTTMEPHLLEACVRDVLNDAAPRAMAVLEPLQVVITNFPAPKPLDIRVPNFPADETKG 602
+A+T ++P +LEACVR+VLN APRAMAVL+PL+VVI NFPA ++ VPNFPADE+KG
Sbjct: 1257 MAKTVIDPVMLEACVREVLNVKAPRAMAVLDPLKVVIQNFPADHSGEVTVPNFPADESKG 1078
Query: 603 FHQVPFASTVFIERSDFKEESEPGYKRLASGQPVGLRHTGYVIELQNIVRGSSGCVERLE 662
H+VP S +FIERSDF+EE++ YKRLA Q VGLRH G VI ++++V+ + G V L
Sbjct: 1077 SHKVPLTSIIFIERSDFREEADKNYKRLAVNQTVGLRHAGLVISVESVVKDADGQVAELV 898
Query: 663 VTCRRADAGEKPKAFIHWVSQPLVCEIRLYERLFQHKNPEDPVEVPGGFLSDLNPASLQV 722
V C A KPKAFIHWVSQPL CEIRLY+ LF HKNPEDP EVPGGFL+D+N SL V
Sbjct: 897 VKCVNATETSKPKAFIHWVSQPLHCEIRLYDTLFYHKNPEDPSEVPGGFLTDVNKDSLTV 718
Query: 723 VEGALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGQIVFNRTVTLKEDPGK 774
+ ALVD SV+ AK +DKFQFER G+FSVDPDS ++VFNRTVTLKEDPGK
Sbjct: 717 LRTALVDNSVSGAKTYDKFQFERNGFFSVDPDSSPDKLVFNRTVTLKEDPGK 562
>16782
Length = 454
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 433 CIYPTYDYTHCLCDSIEHITHSLCT 457
CIY + HC+C I THSLCT
Sbjct: 140 CIY-VDKHKHCMCTCIAAHTHSLCT 69
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981106|ref|NP_065644.2| mannosyl-oligosaccharide
glucosidase [Mus musculus]
(834 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14764 290 e-115
36956 30 3.2
09941 29 7.6
>14764
Length = 2105
Score = 290 bits (743), Expect(2) = e-115, Method: Compositional matrix adjust.
Identities = 153/331 (46%), Positives = 204/331 (61%), Gaps = 19/331 (5%)
Frame = -3
Query: 378 KGLSPEEQALGQVALSGLLGGIGYFYGQGLVLPDTSMEGSEQKMDPALFPPVPLFSGVPS 437
+G+ +E + + A+S +LG IGYFYG LV S+ +P + PLFS VPS
Sbjct: 1680 RGMERKESRVAKAAMSNMLGSIGYFYGSSLV-------QSQYNKEPVDYWEAPLFSAVPS 1522
Query: 438 RSFFPRGFLWDEGFHQLVVQRWDPHLTREALGHWLGLLNADGWIGREQILGDEARARVPP 497
R FFPRGFLWDEGFH L++ RWD L+ E +GHWL L+N +GWI REQILG EARA+VP
Sbjct: 1521 RPFFPRGFLWDEGFHNLLISRWDEDLSLEIIGHWLDLMNTEGWIPREQILGVEARAKVPS 1342
Query: 498 EFLVQRAAHANPPTLLLP---VVHMLEGH-DPDDLAFLRKAFPRLHAWFSWLHQSQAGPV 553
EF+VQR +ANPPT LP ++H + G P + +L +PRL W++W + SQ G V
Sbjct: 1341 EFVVQRNKNANPPTFFLPLKRLIHKMVGSGSPAEHRYLENLYPRLKTWYAWYNTSQVGSV 1162
Query: 554 PLSYRWRGRDLALPTLLNPKTLPSGLDDYPRASHPSTAERHLDLRCWVALGARVLSQLAE 613
+YRWRGRD LNP TL SGLDD PRASHPS ERH+DLRCW+AL + V++++A+
Sbjct: 1161 GSTYRWRGRDAKTVNQLNPLTLTSGLDDXPRASHPSDEERHVDLRCWMALASGVMAEIAK 982
Query: 614 QLG----ETEAAAELGPLAASLEEPGSLDELHWAPELGVFADFGNHTKAVQLKSRPPQGL 669
L E +A L L + LD LHW+ + ++D+G H+ V+L+ PP
Sbjct: 981 SLNKEWQEYDATYRL------LTDNALLDSLHWSEKGQQYSDYGRHSDRVKLEKPPPPAH 820
Query: 670 VRVVGRPP-----------PRLQYVDALGYV 689
++ RPP P+ QYV+A GYV
Sbjct: 819 LQPGQRPPDLPKVRVSLTEPKDQYVNAFGYV 727
Score = 145 bits (367), Expect(2) = e-115, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 91/126 (72%)
Frame = -1
Query: 709 LLDVLADSRHLWSPFGLRSLSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYGH 768
+L L D LW+ +GLRSL+ + Y + NTEHDPPYWRG +W+N+NYL+L AL+HY H
Sbjct: 668 VLTDLKDPSLLWTEYGLRSLARMNRMYNRYNTEHDPPYWRGPIWINMNYLSLSALYHYAH 489
Query: 769 VEGPHKVQAAKLYHELRANVVRNVRQQYQATGFLWEQYSDQDGRGMGCRPFQGWTSLVLL 828
G + A ++Y +LRAN+V+N+ ++++ TG++WE YSD+ G G G PF GW++L++L
Sbjct: 488 TPGSYSQLAGEIYSDLRANLVKNMVKEFERTGYIWENYSDKTGEGKGSHPFTGWSALLVL 309
Query: 829 IMAEEY 834
IM E Y
Sbjct: 308 IMGEIY 291
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Frame = -2
Query: 226 LKSISGHTSELGDFRLTLLPPTSPGDTVPKHGSYNVFWSSNPGLPQLTDMVKS--RLNSW 283
L ++GH+ ELG F L + V +Y P L QLTD+V++ R+ +W
Sbjct: 2089 LNKVTGHSQELGAFTLRFPKVKAESQKVAHLVTYA------PNLAQLTDVVRAGMRVEAW 1928
Query: 284 FQHRP-PGASPDRYLGLPGSLKWEERGPSGQGQFLIQQVTLKAPFSVEFVFESGSAATGG 342
+ R P Y L G L ++ P +++QVT P +E VFESGS
Sbjct: 1927 DKARTLP------YFTLGGRLVPKD-APGAN--LIVKQVTATLPMEMEVVFESGSVQDRP 1775
Query: 343 NQASGRLVGSQLTQALESHAAAFKERFEKTFQLKEKGLSPEEQALGQ 389
N L G+ AL SH F ++F FQL +KG + GQ
Sbjct: 1774 NA----LEGAVFNDALRSHIDDFNQKFNGIFQLDQKGYGEKRIPSGQ 1646
>36956
Length = 460
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +1
Query: 250 GDTVPKHGSYNVFWSSNPGLPQLTDMVKSRLNSWFQHRPPGASPDRYLGLPGSLKWEERG 309
D P + Y ++ ++ + +M +R + W R DRYL LKW E G
Sbjct: 85 ADQYPSNSMYMIWTRADQYIGHNKNMXWTRADHWTDXRXEXIXTDRYLVTNMELKWTETG 264
>09941
Length = 435
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 729 SASSLFYKQRNTEHDPPYWRGAVWLNIN 756
SA+ L +K R TEH P ++ WL IN
Sbjct: 270 SAAKLIFKARKTEHCTPLFKQLHWLPIN 353
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|46048300|ref|NP_705776.2| hypothetical protein
LOC223593 [Mus musculus]
(1159 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
17766 411 e-115
12447 248 1e-65
10280 83 5e-16
>17766
Length = 940
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 188/307 (61%), Positives = 240/307 (78%)
Frame = -3
Query: 754 SFEYIQDYVSIYGLKIWQEEVSRIINYNVEQECNNFLRTKIQDWQSMYQSTHIPIPKFAP 813
SFEYIQDYV+IYGLKIWQEEVSRIINYNVEQECN+FLRTK+QDWQS+YQST IPIPKF
Sbjct: 932 SFEYIQDYVNIYGLKIWQEEVSRIINYNVEQECNSFLRTKVQDWQSIYQSTAIPIPKFQM 753
Query: 814 VDESITFIGRLCREILRITDPKMTCYIDQLNTWYDVKTHQEVTSSRLFSEIQTTLGTFGL 873
VDES+ FIGRL REI+RITDPK T YIDQ+ WYD+KT E+ + +LF +I +G+FGL
Sbjct: 752 VDESVNFIGRLAREIIRITDPKTTTYIDQMKAWYDLKTKAEICNRKLFEKIHRAVGSFGL 573
Query: 874 NGLDRLLCFMIVKELQNFLSMFQKIILKERTVQETLKMLMSAVNPLKSIVANSSKVYLSA 933
+GLDRLLCFM+V+ELQNF + Q+ +LK++ + L +NPL+ +VA KVY A
Sbjct: 572 SGLDRLLCFMVVRELQNFQRLMQRQVLKDKNWSDFFMQLTRTLNPLQGLVAQPQKVYPQA 393
Query: 934 ITKTQKIWSAYLEAIMKVGQMQILRQQIANELNSSCRFDSRHXXXXXXXXXXXXXXXIEA 993
I+KT ++W+ +++ I+ VGQ+Q+LR+QIA ELN+SC+FDS+ IE
Sbjct: 392 ISKTSRLWTHFVDIILXVGQLQLLRRQIAYELNTSCKFDSKFLASSLQTFNNGLLADIER 213
Query: 994 HYRDPSLPYPKEDNTLLYEITAYLEAAGIHNPLNKIYITTKRLPYFPIVNFLFLIAQLPK 1053
HY+DPSLPYPKE+N LL+E+TAYLE+AG HNPL KIYITT+R+P F + NFLF ++QLPK
Sbjct: 212 HYQDPSLPYPKEENPLLFELTAYLESAGFHNPLMKIYITTQRMPMFALFNFLFTLSQLPK 33
Query: 1054 LQYNKNL 1060
L YNK++
Sbjct: 32 LVYNKSI 12
>12447
Length = 456
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 126/140 (90%)
Frame = +2
Query: 180 DSNMDDICKLLRSTGYSSQPGAKRPPNYPESYFQRVPINETFISMVIGRLRSDDIYNQVS 239
DSN+DD+CKLLRSTG+S+ P AKRPPNYPE++F RVPIN +++MVIGRLRSDD+YNQ+S
Sbjct: 2 DSNIDDVCKLLRSTGFSTAPNAKRPPNYPEAFFSRVPINAEYVNMVIGRLRSDDVYNQIS 181
Query: 240 AYPLPEHRSTALANQAAMLYVILYFEPSILHTHQAKMREIVDKYFPDNWVISIYMGITVN 299
AYP PEHRSTALA QA+MLYVILYFEP IL QAKMREIVDK+FPDNWVIS+YMG TVN
Sbjct: 182 AYPQPEHRSTALATQASMLYVILYFEPDILLNQQAKMREIVDKHFPDNWVISVYMGTTVN 361
Query: 300 LADAWEPYKAAKTALNNTLD 319
L DAW+PYKAA TALNNTLD
Sbjct: 362 LLDAWQPYKAALTALNNTLD 421
>10280
Length = 2352
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%)
Frame = +2
Query: 1068 ADPVDWPPXXXXXXXXXKQFHSRYTEQFLALIGQFIRSTMEQCTSQKMPEMPADAVGALL 1127
ADP+D PP KQFHS T FLA + Q++RS ++ S K+ E P D + L+
Sbjct: 5 ADPLDAPPLVVGIFTLLKQFHSENTHFFLAFLAQYVRSIVDTMASAKLAEGPQDVLNVLV 184
Query: 1128 FLEDYVRYTKLPRRVAEAHVPNFIFDEFRT 1157
FLE+++ Y+ LPR++ E+ +P +I DE R+
Sbjct: 185 FLENFIFYSGLPRKMLESLLPAYILDECRS 274
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|117320529|ref|NP_001028442.2| solute carrier family
4, sodium bicarbonate cotransporter, member 7 [Mus musculus]
(1131 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14939 217 e-114
17976 182 2e-54
18083 120 4e-27
07825 33 0.61
26881 33 0.75
25382 29 9.1
>14939
Length = 1186
Score = 217 bits (552), Expect(2) = e-114, Method: Compositional matrix adjust.
Identities = 99/150 (66%), Positives = 117/150 (78%)
Frame = -1
Query: 732 FPTKVRSTISDFAVFLTIVIMVAIDYLVGIPSPKLHVPEKFEPTDPSRGWIISPLGDNPW 791
FPT VR+T+SDF+V + I+ MV D VG+P+PKLHVPE F PT+P RGW+I+P+G+NPW
Sbjct: 1114 FPTMVRATLSDFSVLIAILSMVVFDICVGLPTPKLHVPETFAPTNPKRGWLINPVGENPW 935
Query: 792 WTLLIAAVPALLCTILIFMDQQITAVIINRKEHKLKKGAGYHLDXXXXXXXXXXCSIMGL 851
WT L A +PALL ILIFMDQQITAVI+NRKE+KL KG GYHLD CS +GL
Sbjct: 934 WTTLAAVIPALLAVILIFMDQQITAVIVNRKENKLVKGRGYHLDLFIVSVLIILCSFLGL 755
Query: 852 PWFVAATVLSISHVNSLKVESECSAPGEQP 881
PWFVAATVLSI+HVNSLK ES+CSAP P
Sbjct: 754 PWFVAATVLSINHVNSLKKESQCSAPANNP 665
Score = 213 bits (542), Expect(2) = e-114, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 155/225 (68%), Gaps = 1/225 (0%)
Frame = -3
Query: 876 APGEQPKFLGIREQRVTGLMIFILMGLSVFMTSVLKFIPMPVLYGVFLYMGVSSLKGIQF 935
PGEQPKFLG+REQRVTG+ IF+L+G+SV +TSVLKFIPMPVLYGVFLYMGVSSL+G+Q
Sbjct: 683 CPGEQPKFLGVREQRVTGITIFLLIGISVMLTSVLKFIPMPVLYGVFLYMGVSSLRGMQL 504
Query: 936 FDRIKLFGMPAKHQPDLIYLRYVPLWKVHVFTVVQLTCLVLLWVIKA-SAAAVVFPMMVL 994
R+ ++ MPAK+Q DL++LR+V +VH+FT++Q+ CL+ LW IK+ ++ FP+MVL
Sbjct: 503 VHRVLIWFMPAKYQWDLMFLRHVRTNRVHLFTIIQIFCLLCLWGIKSYKKISIAFPIMVL 324
Query: 995 ALVFVRKLMDLCFTKRELSWLDDLMPESXXXXXXXXXXXXXXXAERMLQDDEDTVHLPFE 1054
A+ FVRK +D F +REL WLDD+MPE+ E+ E + +P
Sbjct: 323 AMCFVRKALDWVFDQRELKWLDDIMPEA---HKRAKEDEIKKQEEQRFSLIEGSTSIPLA 153
Query: 1055 RGSLLQIPVKTLKYSIDPSVVNISDEMAKTAQWKALSMNTENAKV 1099
G L + T++ +D VNIS+EM++TA WK++ N ++ +
Sbjct: 152 MG--LNMEHITIQAEMDQ--VNISEEMSRTALWKSIMHNESSSNL 30
>17976
Length = 781
Score = 182 bits (463), Expect(2) = 2e-54, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
Frame = +1
Query: 885 GIREQRVTGLMIFILMGLSVFMTSVLKFIPMPVLYGVFLYMGVSSLKGIQFFDRIKLFGM 944
G+REQR+TGLM+ +L GL+V T+VLKFIPM VLYGVFLYMG+++LKG+QF DRI L
Sbjct: 139 GVREQRLTGLMVGLLSGLTVLFTAVLKFIPMAVLYGVFLYMGMAALKGMQFIDRILLMLK 318
Query: 945 PAKHQPDLIYLRYVPLWKVHVFTVVQLTCLVLLWVIKA-SAAAVVFPMMVLALVFVRKLM 1003
PAK+QPD YLR+VP+ +VH+FT +Q+ CL +LWVIK+ + +++FP+MVL FVRK +
Sbjct: 319 PAKYQPDTTYLRHVPIKRVHIFTAIQVVCLAVLWVIKSVKSVSIIFPIMVLGTCFVRKGL 498
Query: 1004 DLCFTKRELSWLDDLMPES 1022
D FT+ EL WLDD+MP++
Sbjct: 499 DYLFTQGELKWLDDIMPDA 555
Score = 49.7 bits (117), Expect(2) = 2e-54, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +3
Query: 850 GLPW-FVAATVLSISHVNSLKVESECSAPGEQPKFLG 885
GLP VAATV +++H+ SLK ESEC+APGE+P FLG
Sbjct: 30 GLPLGTVAATVSALAHIMSLKKESECTAPGERPTFLG 140
>18083
Length = 865
Score = 120 bits (300), Expect = 4e-27, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 4/202 (1%)
Frame = -3
Query: 806 ILIFMDQQITAVIINRKEHKLKKGAGYHLDXXXXXXXXXXCSIMGLPWFVAATVLSISHV 865
+L FMDQ I+A ++N ++K+KKG YH D S+ P AA S HV
Sbjct: 863 LLFFMDQNISAALVNAPQNKMKKGTAYHWDLLVIAVVNAVISVFAFPMVHAALPHSPLHV 684
Query: 866 NSLKVESECSAPGEQPK-FLGIREQRVTGLMIFILMGLSVFMTSVLKFIPMPVLYGVFLY 924
+L E G + + +RE R+T ++ IL+GLS+ + VL +IP PVLYG+FLY
Sbjct: 683 RALADVEERVVQGHITQTVVRVRETRITAILSHILIGLSILIMFVLAYIPTPVLYGLFLY 504
Query: 925 MGVSSLKGIQFFDRIKLFGMPAKHQPDLIYLRYVPLWKVHVFTVVQLTCLVLLWVIKASA 984
+ +++L Q F+RI LF P Y+R+VP KVH+FT++QL LV+L V +
Sbjct: 503 VAITALYDNQMFERITLFFTEQSAYPPTHYIRHVPQRKVHIFTLIQLLQLVVLCVFGFVS 324
Query: 985 AA---VVFPMMVLALVFVRKLM 1003
A + FP+++ L+ +R ++
Sbjct: 323 FAYLKMFFPVLIFLLIPIRHMV 258
>07825
Length = 1413
Score = 33.1 bits (74), Expect = 0.61, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 553 LVFEKILFKFCRDYHLSYLSLRTSIGLWTSFLCIVLVATDASSLVCYITRFTEEAFAALI 612
L+F LF+ CR+ L L LR + FLCI + SLV ++ +E+ ++
Sbjct: 133 LLFMSFLFQECREGALMILFLRKTWAFLLYFLCI-----SSLSLVIFVFGQQQESSKQIL 297
Query: 613 CIIFI 617
C++ +
Sbjct: 298 CVVLL 312
>26881
Length = 448
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 513 EATEGRISAIESLFGASLTGIAYSLFAGQPLTILGSTGPVLVFEKILFKFCR 564
E+ RI+ +E FG+S GQPL I G VLV E +L K CR
Sbjct: 50 ESNARRINFVEQCFGSS----------GQPLAI---AGRVLVGEGVLTKLCR 166
>25382
Length = 989
Score = 29.3 bits (64), Expect = 9.1, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +1
Query: 552 VLVFEKILFK------FCRDYHLSYLSLRTSIGLWTSFLCIVLVATDASS 595
VL F + F FC +Y+ L L + L T FLC+VLV D S+
Sbjct: 829 VLCFSVLCFSVLCVSLFCVEYY*K*LFLCINCKLLTPFLCLVLVIVDMSN 978
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|149265148|ref|XP_995248.2| PREDICTED: filamin B, beta
isoform 6 [Mus musculus]
(2619 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13043 410 e-114
16231 245 6e-74
17351 234 3e-61
29446 202 2e-51
19277 157 7e-44
21436 149 1e-35
27230 74 4e-21
19002 95 4e-19
05081 84 7e-16
19147 65 4e-10
19154 64 9e-10
29755 62 3e-09
09100 53 1e-06
17613 53 2e-06
35059 50 2e-05
09711 48 6e-05
04951 46 2e-04
18202 41 0.007
32088 37 0.091
31031 35 0.35
>13043
Length = 1574
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/539 (43%), Positives = 315/539 (58%), Gaps = 2/539 (0%)
Frame = +3
Query: 1357 GIGGLGITVEGPSESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGVHIPGSPFRVPSK 1416
G GGLG+ +EGP E+K+ C DN+DG+C EY P PG YD+++ +G I SPF V +
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQ 182
Query: 1417 DVVDPSKVKIAGPGL-SSCVRACIPQSFTVDSSKAGLAPLEVRVLGP-RGLVEPVNVVDN 1474
+ VD SKVK GPGL +S V A +P FTVD+ AG APL+V P G + +V
Sbjct: 183 NPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPV 362
Query: 1475 GDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPTYDASKVTASGPGLSAYGVPA 1534
+G + TY P EG V VKY + +P SPF ++VLP D SKV SGPG+ VPA
Sbjct: 363 EEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRR-SVPA 539
Query: 1535 SLPVEFAIDARDAGEGLLAVQITDQEGKPQRATVHDNKDGTYAVTYIPDKTGRYMIGVTY 1594
SLP +F +D RDAG L + +G + +N+DGTY V Y P+ G Y I V Y
Sbjct: 540 SLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKY 719
Query: 1595 GGDNIPLSPYRIRATQTGDASKCLATGPGIAPTVKTGEEVGFVVDAKTAGKGKVTCVILT 1654
G ++P SP+ + AT GDAS+C T G + +E VDA AGKG VTC I +
Sbjct: 720 DGQDVPRSPFNVEATPLGDASQCRITD-GAERVIPIEKETVITVDAADAGKGSVTCRIRS 896
Query: 1655 PDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMVSRVPSPEPAL 1714
P G++ + D+++ DGT+ I + G Y+I ++FGG +P+ +T E L
Sbjct: 897 PSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYL 1076
Query: 1715 TSRSTSTCWKLGEGRAQAVGSWVTEEAYVPVSDMNGLGFKPFDLVIPFAVRKGEITGTVH 1774
SR V V + P S + ++P D P ++ +V
Sbjct: 1077 QSRVVDDLI---------VADQVDQVNAAPGSGL----YQPVDFQFPVGPIFNFVSASVI 1217
Query: 1775 MPSGKKATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQFYVNYPNSGSVS 1834
MPSGK + P+I DN+DGTVTVRY PTE GLHE+H+KY I G+P F+V+ NSG V+
Sbjct: 1218 MPSGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVDSVNSGYVT 1397
Query: 1835 AYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKAEISCIDNKDGTCTVTYLPTL 1893
AYGPGL +GV + A FTI T++AG GGL LA+EGPSK EI C+DN+DGTC V+YLP++
Sbjct: 1398 AYGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLPSV 1574
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 261/536 (48%), Gaps = 13/536 (2%)
Frame = +3
Query: 580 GTLGFAIEGPSQAKIEYDDQNDGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPA 639
G LG IEGP +AK++ DD DG+C V+Y+P +PG+Y + ++ D+ IKDSP+ I
Sbjct: 9 GGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNP 188
Query: 640 TGDYNPDLVQAYGPGLEKSGCTINNPAEFIVDPKDAGSAPLKILAQDG-EGQPIDIQMKS 698
+ V+ YGPGL+ S N PA F VD +DAG APL + D G + ++
Sbjct: 189 V---DASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVP 359
Query: 699 RMDGTYACSYTPLKAIKHTIAVVWGGVNIPHSPYRVNIGQGSHPQKVKVFGPGVERSGLK 758
+G Y +Y P K + V +GG +P+SP+ + + G P KVKV GPGV RS +
Sbjct: 360 VEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRS-VP 536
Query: 759 ANEPTHFTVDCTEAGEGDVSVGIKCDARVLSDDEEDVDFDIIHNANDTFTVKYVPPAPGR 818
A+ P FTVD +AG D+ + V D + +N + T+ V Y P G
Sbjct: 537 ASLPAQFTVDTRDAGVADL------ECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGV 698
Query: 819 YTIKVLFASQEIPASPFRVKVDPSHDASKVKAEGPGLSKAGVENGKPTHFTVHTKGAGKA 878
Y I V + Q++P SPF V+ P DAS+ + +E K T TV AGK
Sbjct: 699 YDIIVKYDGQDVPRSPFNVEATPLGDASQCRITDGAERVIPIE--KETVITVDAADAGKG 872
Query: 879 PLNVQFSSPLPGEAVKDLDIIDNYDYSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFTVGV 938
+ + SP + D+DI+D D + T+ + P G + + +GG+ +P +T
Sbjct: 873 SVTCRIRSPSGSDI--DIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEA 1046
Query: 939 AAPLDLSKIKINGLENRVEVGKDQEFAIDTNGAGGQGKLDVTI-LSPSRKVVPCLVAPVA 997
+ K + + + + V + G+G +D + P V V +
Sbjct: 1047 VPEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPS 1226
Query: 998 GRECS-----------TAKFIPREEGLFAVDVTYDGHPVPGSPYTVEASLPPDPTKVKAH 1046
G+ T ++ P E GL + V Y+ + GSP+ + V A+
Sbjct: 1227 GKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVD-SVNSGYVTAY 1403
Query: 1047 GPGLEGGLVGKPAEFTIDTKXXXXXXXXXXVEGPCEAKIECSDNGDGTCSVSYLPT 1102
GPGL G+V +PA FTI+TK VEGP + +I+C DN DGTC+VSYLP+
Sbjct: 1404 GPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLPS 1571
Score = 234 bits (596), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 263/532 (49%), Gaps = 26/532 (4%)
Frame = +3
Query: 1077 VEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSKV 1136
+EGP EAK++C DN DGTC V Y PTKPG+Y +++LF + I SPF I+ P D SKV
Sbjct: 27 IEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKV 206
Query: 1137 VASGPGLEHGKVGE--PGILCVDCSEAGPGTLGLEAVSD-SGAKAEVSIQNNKDGTYAVT 1193
GPGL+ +V P + VD +AG L + SGA+ E I ++G Y T
Sbjct: 207 KCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQAT 386
Query: 1194 YVPLTAGMYTLTMKYGGELVPHFPAWVKVEPAIDTSGIKAFGPGIEGKDVFREATTDFTV 1253
Y+P G + +KYGG+ VP+ P ++V P +D S +K GPG+ + V FTV
Sbjct: 387 YMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVR-RSVPASLPAQFTV 563
Query: 1254 DSRPLTQVGGDHIKAQITNPSGASTECFVKDNADGTYQVEYTPFEKGFHVVEVTYDDVPI 1313
D+R G ++ + P G+ + + ++N DGTY V YTP + G + + V YD +
Sbjct: 564 DTR---DAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDV 734
Query: 1314 PNSPFKVAVTEGCQPSRVHAQGPGLKEAFTNKSNVFTVVTRGAGIGGLGITVEGPSESKI 1373
P SPF V T S+ + K V TV AG G + + PS S I
Sbjct: 735 PRSPFNVEATPLGDASQCRITDGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDI 914
Query: 1374 NCR--DNKDGSCSAEYIPFAPGDYDVNITYGGVHIPGSPFR---VPSKD--------VVD 1420
+ D DG+ + +IP G+Y + I +GG +P + VP + VVD
Sbjct: 915 DIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYLQSRVVD 1094
Query: 1421 P-------SKVKIA-GPGLSSCVRACIPQSFTVDSSKAGLAPLEVRVLGPRGLVEPVNVV 1472
+V A G GL V P + A V+ P G +
Sbjct: 1095 DLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSA-------SVIMPSGKTSYPKIE 1253
Query: 1473 DNGDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPTYDASKVTASGPGLSAYGV 1532
DN DGT TV Y P++ G + + VKY +E I SPF V + ++ VTA GPGLS +GV
Sbjct: 1254 DNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHV-DSVNSGYVTAYGPGLS-HGV 1427
Query: 1533 PASLPVEFAIDARDAGEGLLAVQITDQEGKPQRATVH--DNKDGTYAVTYIP 1582
P F I+ ++AG G LA+ + EG P + + DN+DGT V+Y+P
Sbjct: 1428 -VYEPAVFTINTKEAGAGGLALAV---EG-PSKTEIKCVDNQDGTCNVSYLP 1568
Score = 200 bits (509), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 243/538 (45%), Gaps = 20/538 (3%)
Frame = +3
Query: 1565 RATVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRIRATQTGDASKCLATGPGI 1624
+ DN+DGT V Y P K G+Y I V +G I SP+ ++ DASK GPG+
Sbjct: 48 KMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKVKCYGPGL 227
Query: 1625 -APTVKTGEEVGFVVDAKTAGKGKVTCVILTP-DGTEAEADVIENEDGTYDIFYTAAKPG 1682
A V F VDA+ AG+ + P G + EA+++ E+G Y Y G
Sbjct: 228 DASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAEG 407
Query: 1683 TYVIYVRFGGVDIPNSPFTVMVSRVPSPEPALTSRSTSTCWKLGEGRAQAVGSWVTEEAY 1742
+ V++GG +PNSPF + V +P +P+ S G G ++V + + +
Sbjct: 408 KCKVDVKYGGKPVPNSPFHMQV--LPGVDPSKVKVS-------GPGVRRSVPASLPAQFT 560
Query: 1743 VPVSDMNGLGFKPFDLVIPFAVRKGEITGTVHMPSGKKATPEIVDNKDGTVTVRYAPTEV 1802
V D ++ V P G P +N+DGT V Y P ++
Sbjct: 561 VDTRDAG----------------VADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDL 692
Query: 1803 GLHEMHIKYRGSHIPGNPLQFYVNYPNSGSVSAYGPGLVYGV-ANKTATFTIVTEDAGEG 1861
G++++ +KY G +P +P S G + K T+ DAG+G
Sbjct: 693 GVYDIIVKYDGQDVPRSPFNVEATPLGDASQCRITDGAERVIPIEKETVITVDAADAGKG 872
Query: 1862 GLDLAIEGPSKAEISC--IDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITG 1919
+ I PS ++I +D DGT T++++P G+Y I +K+ +P +TA+
Sbjct: 873 SVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVP 1052
Query: 1920 R------LCCFFSDDNRRCSQVKLGSAA---------DFLLDISETDLSTLTASIKAPSG 1964
L DD QV +AA DF + + ++AS+ PSG
Sbjct: 1053 EDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPI-FNFVSASVIMPSG 1229
Query: 1965 RDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDARRAKV 2024
+ ++ + + + + P E G H + +K N + SP V G
Sbjct: 1230 KTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVDSVNSG---YVTA 1400
Query: 2025 YGQGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVDIQTEDLEDGTCKVSYFPTV 2082
YG GLS G +E + F ++T++AG GG++LAVEGPSK +I+ D +DGTC VSY P+V
Sbjct: 1401 YGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNVSYLPSV 1574
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 236/511 (46%), Gaps = 27/511 (5%)
Frame = +3
Query: 1787 DNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQFYVNYP-NSGSVSAYGPGLVYG-- 1843
DN+DGT V Y PT+ G +++ + + I +P + P ++ V YGPGL
Sbjct: 63 DNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDASKVKCYGPGLDASEV 242
Query: 1844 VANKTATFTIVTEDAGEGGLDLAIEGP---SKAEISCIDNKDGTCTVTYLPTLPGDYSIL 1900
AN A FT+ DAGE LD+ P ++ E + ++G TY+P G +
Sbjct: 243 AANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAEGKCKVD 422
Query: 1901 VKYNDKHIPGSPFTAKITGRL----CCFFSDDNRRCSQVKLGSAADFLLDISETDLSTLT 1956
VKY K +P SPF ++ + RR L A F +D + ++ L
Sbjct: 423 VKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVRRSVPASL--PAQFTVDTRDAGVADLE 596
Query: 1957 ASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEI 2016
++ P G + + + + P ++G + + +K +G V SP ++ + +
Sbjct: 597 CMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFNVEA--TPL 770
Query: 2017 GDARRAKVYGQGLSEGRTFEMSDFI-VDTRDAGYGGISLAVEGPS--KVDIQTEDLEDGT 2073
GDA + ++ G E I VD DAG G ++ + PS +DI D DGT
Sbjct: 771 GDASQCRI-TDGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQGDGT 947
Query: 2074 CKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISGEGR--------------VRESITRT 2119
+S+ P G YI+ KF VP +T + E V + + +
Sbjct: 948 FTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYLQSRVVDDLIVADQVDQV 1127
Query: 2120 SRAPAVATVGSICDLNLKIPEINSSDMSAHVTSPSGHVTEAEIVPMGKNSHCVRFVPQEM 2179
+ AP + D + I + +SA V PSG + +I + VR+ P E
Sbjct: 1128 NAAPGSGLYQPV-DFQFPVGPIFNF-VSASVIMPSGKTSYPKIEDNRDGTVTVRYQPTET 1301
Query: 2180 GVHTVSVKYRGQHVTGSPFQFTVGPLGEGGAHKVRAGGPGLERGEAGIPAEFSIWTREAG 2239
G+H + VKY + + GSPF F V + G V A GPGL G PA F+I T+EAG
Sbjct: 1302 GLHELHVKYNNECIQGSPFFFHVDSVNSG---YVTAYGPGLSHGVVYEPAVFTINTKEAG 1472
Query: 2240 AGGLSIAVEGPSKAEITFDDHKNGSCGVSYI 2270
AGGL++AVEGPSK EI D+++G+C VSY+
Sbjct: 1473 AGGLALAVEGPSKTEIKCVDNQDGTCNVSYL 1565
Score = 194 bits (494), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 160/550 (29%), Positives = 253/550 (46%), Gaps = 26/550 (4%)
Frame = +3
Query: 773 GEGDVSVGIK--CDARVLSDDEEDVDFDIIHNANDTFTVKYVPPAPGRYTIKVLFASQEI 830
G+G + +GI+ +A++ DD N + T V+Y P PG+Y I VLF + I
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDD----------NRDGTCRVEYYPTKPGKYDISVLFGDKPI 152
Query: 831 PASPFRVKVDPSHDASKVKAEGPGLSKAGVENGKPTHFTVHTKGAGKAPLNVQFSSPLPG 890
SPF VK+ DASKVK GPGL + V P FTV + AG+APL+V F+ PL G
Sbjct: 153 KDSPFSVKIQNPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSG 332
Query: 891 EAVKDLDIIDNYDYSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFTVGVAAPLDLSKIKIN 950
A ++ +I+ + + Y P +G +V V YGG P+P SPF + V +D SK+K++
Sbjct: 333 -AQQEAEIVPVEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVS 509
Query: 951 --GLENRVEVGKDQEFAIDTNGAGGQGKLDVTILSPSRKVVPCLVAPVAGRECSTAKFI- 1007
G+ V +F +DT A G L+ + P + E T I
Sbjct: 510 GPGVRRSVPASLPAQFTVDTRDA-GVADLECMVQRPDGSFIKPY---FQNNEDGTYDVIY 677
Query: 1008 -PREEGLFAVDVTYDGHPVPGSPYTVEASLPPDPTKVKAHGPGLEGGLVGKPAEFTIDTK 1066
P + G++ + V YDG VP SP+ VEA+ D ++ + + K T+D
Sbjct: 678 TPEDLGVYDIIVKYDGQDVPRSPFNVEATPLGDASQCRITDGAERVIPIEKETVITVDAA 857
Query: 1067 XXXXXXXXXXVEGP--CEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFK 1124
+ P + I+ D GDGT ++S++P GEY + I F +P +
Sbjct: 858 DAGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYT 1037
Query: 1125 ADIEMPFDPSKVVASGPGLEHGKVGEPGILCVDCSEAGPGT------------------L 1166
A+ +P D + ++ V + VD A PG+ +
Sbjct: 1038 AE-AVPEDEYEKYLQSRVVDDLIVADQ----VDQVNAAPGSGLYQPVDFQFPVGPIFNFV 1202
Query: 1167 GLEAVSDSGAKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPAWVKVEPAI 1226
+ SG + I++N+DGT V Y P G++ L +KY E + P + V+ ++
Sbjct: 1203 SASVIMPSGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHVD-SV 1379
Query: 1227 DTSGIKAFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAQITNPSGASTECFVKDNA 1286
++ + A+GPG+ V+ A FT++++ + G + + PS +C DN
Sbjct: 1380 NSGYVTAYGPGLSHGVVYEPAV--FTINTK---EAGAGGLALAVEGPSKTEIKCV--DNQ 1538
Query: 1287 DGTYQVEYTP 1296
DGT V Y P
Sbjct: 1539 DGTCNVSYLP 1568
Score = 170 bits (431), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 241/544 (44%), Gaps = 37/544 (6%)
Frame = +3
Query: 1955 LTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQS 2014
+ A +K RD C + + P + G++ +S+ + +SP S+ + Q+
Sbjct: 39 VEAKMKCDDNRDGTCR----------VEYYPTKPGKYDISVLFGDKPIKDSPFSVKI-QN 185
Query: 2015 EIGDARRAKVYGQGL--SEGRTFEMSDFIVDTRDAGYGGISLAVEGP---SKVDIQTEDL 2069
+ DA + K YG GL SE + F VD RDAG + + P ++ + + +
Sbjct: 186 PV-DASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPV 362
Query: 2070 EDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPF-----------TVKISGEGRVRESITR 2118
E+G + +Y P G V K+ + VP SPF VK+SG G VR S+
Sbjct: 363 EEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPG-VRRSVP- 536
Query: 2119 TSRAPAVATVGSICDLNLKIPEINSSDMSAHVTSPSGHVTEAEIVPMGKNSHCVRFVPQE 2178
+ PA TV + + +D+ V P G + ++ V + P++
Sbjct: 537 -ASLPAQFTVDTR--------DAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPED 689
Query: 2179 MGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGAHKVRAGGPGLERGEAGIPAE----FSIW 2234
+GV+ + VKY GQ V SPF PLG+ ++ G E IP E ++
Sbjct: 690 LGVYDIIVKYDGQDVPRSPFNVEATPLGDASQCRITDGA------ERVIPIEKETVITVD 851
Query: 2235 TREAGAGGLSIAVEGPSKAEITFD--DHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSP 2292
+AG G ++ + PS ++I D D +G+ +S+I Q G Y + IKF +PD
Sbjct: 852 AADAGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQ 1031
Query: 2293 YLVPVIAPSDD------ARCLTVLSLQESGLKVN--------QPASFAIRLNGAKGKIDA 2338
Y + P D+ +R + L + + +VN QP F + + A
Sbjct: 1032 YTAEAV-PEDEYEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSA 1208
Query: 2339 KVHSPSGAVEECHVSELEPDKYAVRFIPHENGIHTIDVKFNGSHVVGSPFKVRVGEPGQA 2398
V PSG + + VR+ P E G+H + VK+N + GSPF V +
Sbjct: 1209 SVIMPSGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHV----DS 1376
Query: 2399 GNPALVSAYGAGLETGTTGIQSEFFINTTQAGPGTLSVTIEGPSKVKMDCQEIPEGY-KV 2457
N V+AYG GL G + F INT +AG G L++ +EGPSK ++ C + +G V
Sbjct: 1377 VNSGYVTAYGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKCVDNQDGTCNV 1556
Query: 2458 MYTP 2461
Y P
Sbjct: 1557 SYLP 1568
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 228/523 (43%), Gaps = 31/523 (5%)
Frame = +3
Query: 1859 GEGGLDLAIEGPSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI- 1917
G+GGL L IEGP +A++ C DN+DGTC V Y PT PG Y I V + DK I SPF+ KI
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQ 182
Query: 1918 ----TGRLCCFFSDDNRRCSQVKLGSAADFLLDISETDLSTLTASIKAP-SGRDEPCLLK 1972
++ C+ S+V A F +D + + L + P SG + +
Sbjct: 183 NPVDASKVKCYGP--GLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIV 356
Query: 1973 RLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDARRAKVYGQGLSEG 2032
+ +++PR G+ V +K G V NSP + V+ D + KV G G+
Sbjct: 357 PVEEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGV--DPSKVKVSGPGVRRS 530
Query: 2033 RTFEM-SDFIVDTRDAGYGGISLAVEGP--SKVDIQTEDLEDGTCKVSYFPTVPGVYIVS 2089
+ + F VDTRDAG + V+ P S + ++ EDGT V Y P GVY +
Sbjct: 531 VPASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDII 710
Query: 2090 TKFADEHVPGSPFTVKISGEGRVRESITRTSRAPAVATVGSICDLNLKIPEINSSDMSAH 2149
K+ + VP SPF V+ + G + T A V + + + + ++
Sbjct: 711 VKYDGQDVPRSPFNVEATPLGDASQCRI-TDGAERVIPIEKETVITVDAADAGKGSVTCR 887
Query: 2150 VTSPSGHVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGG 2209
+ SPSG + +IV G + + F+PQ G + + +K+ G V Q+T + E
Sbjct: 888 IRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDG--QYTAEAVPEDE 1061
Query: 2210 AHKV-------------------RAGGPGLERGEAGIPAEFSIWTREAGAGGLSIAVEGP 2250
K A G GL + P +F +S +V P
Sbjct: 1062 YEKYLQSRVVDDLIVADQVDQVNAAPGSGLYQ-----PVDFQFPVGPI-FNFVSASVIMP 1223
Query: 2251 S--KAEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSPYLVPVIAPSDDARCLT 2308
S + +D+++G+ V Y E G +E+ +K+N+E I SP+ V S ++ +T
Sbjct: 1224 SGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHV--DSVNSGYVT 1397
Query: 2309 VLSLQESGLKVNQPASFAIRLNGA-KGKIDAKVHSPSGAVEEC 2350
S V +PA F I A G + V PS +C
Sbjct: 1398 AYGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPSKTEIKC 1526
Score = 150 bits (378), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 221/541 (40%), Gaps = 29/541 (5%)
Frame = +3
Query: 302 EARVTPDSDKNKTYSVEYLPKVTGLHKVIVLFAGQHISKSPFEVNVDKAQGDASKVTAKG 361
EA++ D +++ T VEY P G + + VLF + I SPF V + DASKV G
Sbjct: 42 EAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPV-DASKVKCYG 218
Query: 362 PGLETTGNIANKPTYFDIYTAGAGVGDIGIEVEDPQGKNSVELLVEDRGNQVYRCVYKPV 421
PGL+ + AN P F + AG + + DP E + +Y+ Y P
Sbjct: 219 PGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPR 398
Query: 422 QPGPHVVKVSFAGDAIPKSPFGVQIGEACNPNACRASGRGLQPKGVRIRETADFKVDTKA 481
G V V + G +P SPF +Q+ +P+ + SG G++ + V A F VDT+
Sbjct: 399 AEGKCKVDVKYGGKPVPNSPFHMQVLPGVDPSKVKVSGPGVR-RSVPASLPAQFTVDTRD 575
Query: 482 AGSGELGVTVKGPKGLEELVKQKGFLDGVYSFEYYPSTPGKYSVAVTWGGHHIPKSPFEV 541
AG +L V+ P G + DG Y Y P G Y + V + G +P+SPF V
Sbjct: 576 AGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFNV 755
Query: 542 QVGPEAGMQKVRAWGPGLHGGIVGRSADFVVESIGSEVGTLGFAIEGPSQAKIEYD--DQ 599
+ P + R + + V++ + G++ I PS + I+ D DQ
Sbjct: 756 EATPLGDASQCRITDGAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQ 935
Query: 600 NDGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPATGDYNPDLVQAYGPGLEKSG 659
DG+ + + P+ GEY + I + D Y A P D + Y L+
Sbjct: 936 GDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPE------DEYEKY---LQSR- 1085
Query: 660 CTINNPAEFIVDPKDAGSAPLKILAQDGEG--QPIDIQ---------------------- 695
+VD ++ A G G QP+D Q
Sbjct: 1086---------VVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSGKTS 1238
Query: 696 ---MKSRMDGTYACSYTPLKAIKHTIAVVWGGVNIPHSPYRVNIGQGSHPQKVKVFGPGV 752
++ DGT Y P + H + V + I SP+ ++ + V +GPG+
Sbjct: 1239YPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHV-DSVNSGYVTAYGPGL 1415
Query: 753 ERSGLKANEPTHFTVDCTEAGEGDVSVGIKCDARVLSDDEEDVDFDIIHNANDTFTVKYV 812
+ EP FT++ EAG G +++ ++ ++ + + N + T V Y+
Sbjct: 1416SHGVVY--EPAVFTINTKEAGAGGLALAVEGPSK--------TEIKCVDNQDGTCNVSYL 1565
Query: 813 P 813
P
Sbjct: 1566P 1568
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 215/478 (44%), Gaps = 25/478 (5%)
Frame = +3
Query: 258 RAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDP-EGNKEEARVTPDSDKNKTYS 316
+ YG G++ + PA FTVD AG+ + V DP G ++EA + P + Y
Sbjct: 207 KCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEE--GLYQ 380
Query: 317 VEYLPKVTGLHKVIVLFAGQHISKSPFEVNVDKAQGDASKVTAKGPGLETTGNIANKPTY 376
Y+P+ G KV V + G+ + SPF + V D SKV GPG+ + A+ P
Sbjct: 381 ATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVLPGV-DPSKVKVSGPGVRRSVP-ASLPAQ 554
Query: 377 FDIYTAGAGVGDIGIEVEDPQGKNSVELLVEDRGNQVYRCVYKPVQPGPHVVKVSFAGDA 436
F + T AGV D+ V+ P G + ++ ++ + Y +Y P G + + V + G
Sbjct: 555 FTVDTRDAGVADLECMVQRPDG-SFIKPYFQNNEDGTYDVIYTPEDLGVYDIIVKYDGQD 731
Query: 437 IPKSPFGVQIGEACNPNACRASGRGLQPKGVRIRETADFKVDTKAAGSGELGVTVKGPKG 496
+P+SPF V+ + + CR + + + I + VD AG G + ++ P G
Sbjct: 732 VPRSPFNVEATPLGDASQCRITDGA--ERVIPIEKETVITVDAADAGKGSVTCRIRSPSG 905
Query: 497 LEELVKQKGFLDGVYSFEYYPSTPGKYSVAVTWGGHHIPKSPFEVQVGPEAGMQKV---- 552
+ + DG ++ + P G+Y + + +GG+ +P + + PE +K
Sbjct: 906 SDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGNFVPDGQYTAEAVPEDEYEKYLQSR 1085
Query: 553 ---------------RAWGPGLHGGI-----VGRSADFVVESIGSEVGTLGFAIEGPSQA 592
A G GL+ + VG +FV S+ G +
Sbjct: 1086VVDDLIVADQVDQVNAAPGSGLYQPVDFQFPVGPIFNFVSASVIMPSGKTSY-------P 1244
Query: 593 KIEYDDQNDGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPATGDYNPDLVQAYG 652
KIE D DG+ V+Y P E G + +H+ ++E I+ SP+ F H N V AYG
Sbjct: 1245KIE--DNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPF--FFH--VDSVNSGYVTAYG 1406
Query: 653 PGLEKSGCTINNPAEFIVDPKDAGSAPLKILAQDGEGQPIDIQMKSRMDGTYACSYTP 710
PGL S + PA F ++ K+AG+ L LA +G + +I+ DGT SY P
Sbjct: 1407PGL--SHGVVYEPAVFTINTKEAGAGGLA-LAVEGPSK-TEIKCVDNQDGTCNVSYLP 1568
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 173/380 (45%), Gaps = 8/380 (2%)
Frame = +3
Query: 2239 GAGGLSIAVEGPSKAEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSPYLVPVI 2298
G GGL + +EGP +A++ DD+++G+C V Y +PG Y++S+ F D+ I DSP+ V +
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQ 182
Query: 2299 APSDDARCLTV-LSLQESGLKVNQPASFAIRLNGA-KGKIDAKVHSP-SGAVEECHVSEL 2355
P D ++ L S + N PA F + A + +D P SGA +E + +
Sbjct: 183 NPVDASKVKCYGPGLDASEVAANLPAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPV 362
Query: 2356 EPDKYAVRFIPHENGIHTIDVKFNGSHVVGSPFKVRVGEPGQAGNPALVSAYGAGLETGT 2415
E Y ++P G +DVK+ G V SPF ++V PG +P+ V G G+
Sbjct: 363 EEGLYQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQV-LPGV--DPSKVKVSGPGVRRSV 533
Query: 2416 -TGIQSEFFINTTQAGPGTLSVTIEGP--SKVKMDCQEIPEG-YKVMYTPMAPGNYLIGV 2471
+ ++F ++T AG L ++ P S +K Q +G Y V+YTP G Y I V
Sbjct: 534 PASLPAQFTVDTRDAGVADLECMVQRPDGSFIKPYFQNNEDGTYDVIYTPEDLGVYDIIV 713
Query: 2472 KYGGPNHISRSPFKAKVTGQRLVSPGSANETSSILVESVTRSSTETCYSAIPKSSSDASK 2531
KY G + RSPF + T P + +
Sbjct: 714 KYDG-QDVPRSPFNVEAT---------------------------------PLGDASQCR 791
Query: 2532 VTSKGAGLSKAFVGQKSSFL-VDCSKAGSNMLLIGVHGPTTPCEEVSMKHVGKQQYNVTY 2590
+T G + +K + + VD + AG + + P+ ++ + G + +++
Sbjct: 792 ITD---GAERVIPIEKETVITVDAADAGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTISF 962
Query: 2591 VVKERGDYVLAVKWGEEHIP 2610
+ + G+Y++ +K+G +P
Sbjct: 963 IPQYAGEYIIEIKFGGNFVP 1022
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 79/193 (40%), Gaps = 4/193 (2%)
Frame = +3
Query: 2430 GPGTLSVTIEGPSKVKMDCQEIPEGY-KVMYTPMAPGNYLIGVKYGGPNHISRSPFKAKV 2488
G G L + IEGP + KM C + +G +V Y P PG Y I V +G I SPF K+
Sbjct: 3 GKGGLGLGIEGPVEAKMKCDDNRDGTCRVEYYPTKPGKYDISVLFGD-KPIKDSPFSVKI 179
Query: 2489 TGQRLVSPGSANETSSILVESVTRSSTETCYSAIPKSSSDASKVTSKGAGLSKAFVGQK- 2547
++ DASKV G GL + V
Sbjct: 180 -----------------------------------QNPVDASKVKCYGPGLDASEVAANL 254
Query: 2548 -SSFLVDCSKAGSNMLLIGVHGPTTPCE-EVSMKHVGKQQYNVTYVVKERGDYVLAVKWG 2605
+ F VD AG L + P + + E + V + Y TY+ + G + VK+G
Sbjct: 255 PAVFTVDARDAGEAPLDVTFTDPLSGAQQEAEIVPVEEGLYQATYMPRAEGKCKVDVKYG 434
Query: 2606 EEHIPGSPFHVTV 2618
+ +P SPFH+ V
Sbjct: 435 GKPVPNSPFHMQV 473
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 2526 SSDASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGPTTPCEEVSMKHVGKQQ 2585
S ++ VT+ G GLS V + + F ++ +AG+ L + V GP+ + +K V Q
Sbjct: 1374 SVNSGYVTAYGPGLSHGVVYEPAVFTINTKEAGAGGLALAVEGPS----KTEIKCVDNQD 1541
Query: 2586 --YNVTYV 2591
NV+Y+
Sbjct: 1542 GTCNVSYL 1565
>16231
Length = 1393
Score = 245 bits (625), Expect(2) = 6e-74, Method: Compositional matrix adjust.
Identities = 135/288 (46%), Positives = 186/288 (64%), Gaps = 5/288 (1%)
Frame = +3
Query: 286 QGDVMVFVEDPEGNKEEARVTPDSDKNKTYSVEYLPKVTGLHKVIVLFAGQHISKSPFEV 345
+GDV V + +P+G +E V ++D+N TYS Y+P + G +KV +LFA + I+KSPF V
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 346 NVDKAQGDASKVTAKGPGLETTGNIANKPTYFDIYTAGAGVGDIGIEVEDPQG-KNSVEL 404
V+ A GDASKVTA GPGLE TG +A K T+F+++ GAG G + + + DP G K++V
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRP 536
Query: 405 LVEDRGNQ--VYRCVYKPVQPGPHVVKVSFAGDAIPKSPFGVQIGEACNPNACRASGRGL 462
V+ ++ Y Y + G H V V FAG IP SPFGVQ+ A N AC A+GRG+
Sbjct: 537 KVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGV 716
Query: 463 QPKGVRIRETADFKVDTKAAGSGELGVTVKGPKGLEELVKQKGFLDG--VYSFEYYPSTP 520
QP+GVR+++ ADF V TK AG GE+ V + GP G+EE + K D V+ Y PS P
Sbjct: 717 QPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKP 896
Query: 521 GKYSVAVTWGGHHIPKSPFEVQVGPEAGMQKVRAWGPGLHGGIVGRSA 568
G Y + +T+G HI KSPF+++VGP K+RA+GPGL GG+V + A
Sbjct: 897 GNYIINITFGDQHISKSPFKIEVGPYK-ESKIRAYGPGLEGGVVQQKA 1037
Score = 53.9 bits (128), Expect(2) = 6e-74, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +1
Query: 229 SVMTYLSQFXXXXXXXXXXXXXXXXXXXXRAYGRGIEPTGNMVKQPAKFTVDTISAGQG 287
S+MTYLSQF RAYG G+EP GN V PA+FTV+T SAG+G
Sbjct: 7 SMMTYLSQFPNAKLKAGAPLRPRLNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 108 bits (271), Expect(2) = 1e-38, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 123/272 (45%), Gaps = 14/272 (5%)
Frame = +3
Query: 1178 AEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPAWVKVEPAI-DTSGIKAFGP 1236
EV N+++ TY+ YVP G Y + + + +++ P V VE A D S + A GP
Sbjct: 228 CEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASKVTASGP 407
Query: 1237 GIEGKDVFREATTDFTVDSRPLTQVGGDHIKAQITNPSGASTECFVK----DNADGTYQV 1292
G+E V T F V + G + I +P G K + D TY V
Sbjct: 408 GLEKTGVVATKKTFFEVFVK---GAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYLV 578
Query: 1293 EYTPFEKGFHVVEVTYDDVPIPNSPFKVAVTEGCQPSRVHAQGPGLKEAFTNKSNV--FT 1350
EY ++G H V V + IPNSPF V V +A G G++ + F
Sbjct: 579 EYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPRGVRVKDRADFY 758
Query: 1351 VVTRGAGIGGLGITVEGPSESKINCRDNK----DGSCSAEYIPFAPGDYDVNITYGGVHI 1406
V T+GAG G + + + GP + C+ K Y P PG+Y +NIT+G HI
Sbjct: 759 VHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHI 938
Query: 1407 PGSPFRV---PSKDVVDPSKVKIAGPGLSSCV 1435
SPF++ P K+ SK++ GPGL V
Sbjct: 939 SKSPFKIEVGPYKE----SKIRAYGPGLEGGV 1022
Score = 72.0 bits (175), Expect(2) = 1e-38, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Frame = +2
Query: 1469 VNVVDNGDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPT--YDASKVTASGPG 1526
+ +DNGDG+ V Y P+ G Y V + +DE+IP+SPF + P +DA KV A GPG
Sbjct: 1109 IECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPG 1288
Query: 1527 LSAYGVPASLPVEFAIDARDAGEGLLAVQITDQE 1560
L GV + EF +D + AG+ L + D +
Sbjct: 1289 LEKSGVAPNKWAEFTVDTKAAGKAPLVITGMDTD 1390
Score = 115 bits (287), Expect(3) = 9e-38, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 7/283 (2%)
Frame = +3
Query: 676 GSAPLKILAQDGEGQPIDIQMKSRMDGTYACSYTPLKAIKHTIAVVWGGVNIPHSPYRVN 735
G + IL G + +++ + + TY+C+Y P + + +++ I SP+ V
Sbjct: 180 GDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVT 359
Query: 736 I-GQGSHPQKVKVFGPGVERSGLKANEPTHFTVDCTEAGEGDVSV------GIKCDARVL 788
+ G KV GPG+E++G+ A + T F V AG G V V G K + R
Sbjct: 360 VEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPK 539
Query: 789 SDDEEDVDFDIIHNANDTFTVKYVPPAPGRYTIKVLFASQEIPASPFRVKVDPSHDASKV 848
D D T+ V+YV G +++ V FA +IP SPF V+V P+ +A
Sbjct: 540 VQSAPDKD--------ATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKAC 695
Query: 849 KAEGPGLSKAGVENGKPTHFTVHTKGAGKAPLNVQFSSPLPGEAVKDLDIIDNYDYSHTV 908
A G G+ GV F VHTKGAG + VQ P E L + +
Sbjct: 696 YATGRGVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWEC 875
Query: 909 KYTPTQQGNMQVLVTYGGDPIPKSPFTVGVAAPLDLSKIKING 951
Y P++ GN + +T+G I KSPF + V P SKI+ G
Sbjct: 876 VYNPSKPGNYIINITFGDQHISKSPFKIEV-GPYKESKIRAYG 1001
Score = 47.0 bits (110), Expect(3) = 9e-38, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Frame = +2
Query: 964 FAIDTNGAGGQGKLDVTILSPSRKVVPCLVAPVAGRECSTAKFIPREEGLFAVDVTYDGH 1023
F ++TNG G L +I PS+ + CL G + ++P G +AV +
Sbjct: 1040 FTVETNGE--TGALGFSIEGPSQAQIECLDN---GDGSADVWYLPTMPGEYAVHILCSDE 1204
Query: 1024 PVPGSPYT--VEASLPPDPTKVKAHGPGLEGGLVG--KPAEFTIDTK 1066
+P SP+ ++ + D KV A GPGLE V K AEFT+DTK
Sbjct: 1205 DIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTK 1345
Score = 36.2 bits (82), Expect(3) = 9e-38, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 644 NPDLVQAYGPGLEKSGCTINNPAEFIVDPKDAGSAPLKIL 683
NP V+AYGPGLE G + PA F V+ AG + L
Sbjct: 79 NPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRGMWRCL 198
Score = 118 bits (296), Expect(3) = 2e-36, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 4/275 (1%)
Frame = +3
Query: 592 AKIEYDDQNDGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPATGDYNPDLVQAY 651
++E+++ + + Y P G Y V+I+ ++ I SP+ + A GD + V A
Sbjct: 228 CEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASK--VTAS 401
Query: 652 GPGLEKSGCTINNPAEFIVDPKDAGSAPLKILAQDGEGQPIDIQMKSR----MDGTYACS 707
GPGLEK+G F V K AG+ + ++ D G+ +++ K + D TY
Sbjct: 402 GPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYLVE 581
Query: 708 YTPLKAIKHTIAVVWGGVNIPHSPYRVNIGQGSHPQKVKVFGPGVERSGLKANEPTHFTV 767
Y + H++ V + G IP+SP+ V + S+ + G GV+ G++ + F V
Sbjct: 582 YVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPRGVRVKDRADFYV 761
Query: 768 DCTEAGEGDVSVGIKCDARVLSDDEEDVDFDIIHNANDTFTVKYVPPAPGRYTIKVLFAS 827
AG+G+V+V I V EE + + + + Y P PG Y I + F
Sbjct: 762 HTKGAGDGEVAVQIIGPGGV----EEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGD 929
Query: 828 QEIPASPFRVKVDPSHDASKVKAEGPGLSKAGVEN 862
Q I SPF+++V P + SK++A GPGL V+
Sbjct: 930 QHISKSPFKIEVGP-YKESKIRAYGPGLEGGVVQQ 1031
Score = 47.4 bits (111), Expect(3) = 2e-36, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Frame = +2
Query: 867 HFTVHTKGAGKAPLNVQFSSPLPGEAVKDLDIIDNYDYSHTVKYTPTQQGNMQVLVTYGG 926
FTV T G A + FS P +A ++ +DN D S V Y PT G V +
Sbjct: 1037 RFTVETNGETGA---LGFSIEGPSQA--QIECLDNGDGSADVWYLPTMPGEYAVHILCSD 1201
Query: 927 DPIPKSPFTVGV--AAPLDLSKI--KINGLENR-VEVGKDQEFAIDTNGAG 972
+ IPKSPF + AA D K+ K GLE V K EF +DT AG
Sbjct: 1202 EDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAG 1354
Score = 27.7 bits (60), Expect(3) = 2e-36, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 545 PEAGMQKVRAWGPGLH--GGIVGRSADFVVESIGSEVG 580
P +VRA+GPGL G VG A F VE+ + G
Sbjct: 70 PRLNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 136/260 (52%), Gaps = 10/260 (3%)
Frame = +3
Query: 1455 LEVRVLGPRGLVEPVNVVDNGDG--THTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVL 1512
+EV +L P+G+ E V N D T++ Y P+ EG Y V++ +A++ I +SPF V V
Sbjct: 186 VEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVE 365
Query: 1513 -PTYDASKVTASGPGLSAYGVPASLPVEFAIDARDAGEGLLAVQITDQEGKPQ--RATVH 1569
DASKVTASGPGL GV A+ F + + AG G + V I D G+ R V
Sbjct: 366 GAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQ 545
Query: 1570 D--NKDGTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRIRATQTGDASKCLATGPGIAPT 1627
+KD TY V Y+ G + + V + G IP SP+ ++ +A C ATG G+ P
Sbjct: 546 SAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPR 725
Query: 1628 -VKTGEEVGFVVDAKTAGKGKVTCVILTPDGTEAEADV--IENEDGTYDIFYTAAKPGTY 1684
V+ + F V K AG G+V I+ P G E + + + ++ ++ Y +KPG Y
Sbjct: 726 GVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNY 905
Query: 1685 VIYVRFGGVDIPNSPFTVMV 1704
+I + FG I SPF + V
Sbjct: 906 IINITFGDQHISKSPFKIEV 965
Score = 108 bits (271), Expect(2) = 1e-31, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Frame = +3
Query: 259 AYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEGNKEEAR--VTPDSDKNKTYS 316
A G G+E TG + + F V AG G V V + DP G K+ R V DK+ TY
Sbjct: 396 ASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYL 575
Query: 317 VEYLPKVTGLHKVIVLFAGQHISKSPFEVNVDKAQGDASKVTAKGPGLETTGNIANKPTY 376
VEY+ GLH V V FAG I SPF V V A +A A G G++ G
Sbjct: 576 VEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPAS-NAKACYATGRGVQPRGVRVKDRAD 752
Query: 377 FDIYTAGAGVGDIGIEVEDPQG-KNSVELLVEDRGNQVYRCVYKPVQPGPHVVKVSFAGD 435
F ++T GAG G++ +++ P G + +L +V+ CVY P +PG +++ ++F
Sbjct: 753 FYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQ 932
Query: 436 AIPKSPFGVQIGEACNPNACRASGRGLQ 463
I KSPF +++G + RA G GL+
Sbjct: 933 HISKSPFKIEVGPY-KESKIRAYGPGLE 1013
Score = 48.5 bits (114), Expect(2) = 1e-31, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +2
Query: 475 FKVDTKAAGSGELGVTVKGPKGLEELVKQKGFLDGVYSFEYYPSTPGKYSVAVTWGGHHI 534
F V+T +G LG +++GP + G DG Y P+ PG+Y+V + I
Sbjct: 1040 FTVETNGE-TGALGFSIEGPSQAQIECLDNG--DGSADVWYLPTMPGEYAVHILCSDEDI 1210
Query: 535 PKSPFEVQVGPEAGM--QKVRAWGPGLHGGIVG--RSADFVVES 574
PKSPF + P A +KV A GPGL V + A+F V++
Sbjct: 1211 PKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDT 1342
Score = 111 bits (278), Expect(3) = 8e-31, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 127/268 (47%), Gaps = 8/268 (2%)
Frame = +3
Query: 1365 VEGPSESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGVHIPGSPFRVPSKDVV-DPSK 1423
VE E + N N SC+ Y+P G Y VNI + I SPF V + D SK
Sbjct: 216 VEETCEVEFNNDRNLTYSCA--YVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASK 389
Query: 1424 VKIAGPGLSSC-VRACIPQSFTVDSSKAGLAPLEVRVLGPRGL---VEP-VNVVDNGDGT 1478
V +GPGL V A F V AG ++V +L P G V P V + D T
Sbjct: 390 VTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDAT 569
Query: 1479 HTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPTYDASKVTASGPGLSAYGVPASLPV 1538
+ V Y +G + V+V +A +IP SPF V+V P +A A+G G+ GV
Sbjct: 570 YLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQPRGVRVKDRA 749
Query: 1539 EFAIDARDAGEGLLAVQITDQEGKPQRATVHDNKDG--TYAVTYIPDKTGRYMIGVTYGG 1596
+F + + AG+G +AVQI G ++ + D + Y P K G Y+I +T+G
Sbjct: 750 DFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGD 929
Query: 1597 DNIPLSPYRIRATQTGDASKCLATGPGI 1624
+I SP++I + SK A GPG+
Sbjct: 930 QHISKSPFKIEVGPYKE-SKIRAYGPGL 1010
Score = 40.0 bits (92), Expect(3) = 8e-31, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 1658 TEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPF 1700
++A+ + ++N DG+ D++Y PG Y +++ DIP SPF
Sbjct: 1097 SQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPF 1225
Score = 23.1 bits (48), Expect(3) = 8e-31, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +1
Query: 1314 PNSPFKVA--VTEGCQPSRVHAQGPGL--KEAFTNKSNVFTVVTRGAGIG 1359
PN+ K + P+RV A GPGL K FTV T AG G
Sbjct: 34 PNAKLKAGAPLRPRLNPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Frame = +2
Query: 536 KSPFEVQVGPEAGMQKVRAWG-PGLHGGIV-GRSADFVVESIGSEVGTLGFAIEGPSQAK 593
+ P + + GP G Q W PG GG GR F VE+ G E G LGF+IEGPSQA+
Sbjct: 941 QKPLQDRGGPLXGEQDQGLWTRPGRRGGAAEGR---FTVETNG-ETGALGFSIEGPSQAQ 1108
Query: 594 IEYDDQNDGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPATGDYNPDLVQAYGP 653
IE D DGS DV Y P PGEYAVHI+C DEDI SP+MA I PA D++ + V A GP
Sbjct: 1109 IECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAA-DFDAEKVIAKGP 1285
Query: 654 GLEKSGCTINNPAEFIVDPKDAGSAPLKILAQD 686
GLEKSG N AEF VD K AG APL I D
Sbjct: 1286 GLEKSGVAPNKWAEFTVDTKAAGKAPLVITGMD 1384
Score = 105 bits (262), Expect(2) = 4e-29, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 13/291 (4%)
Frame = +3
Query: 877 KAPLNVQFSSPLPGEAVKDLDIIDNYDYSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFTV 936
K + V +P E +++ ++ + +++ Y PT +G+ +V + + I KSPFTV
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 937 GV-AAPLDLSKIKING--LENR-VEVGKDQEFAIDTNGAGGQGKLDVTILSP-SRK--VV 989
V A D SK+ +G LE V K F + GAG GK+DV IL P RK V
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAG-NGKVDVVILDPHGRKDNVR 533
Query: 990 PCLVAPVAGRECSTAKFIPREEGLFAVDVTYDGHPVPGSPYTVEASLPPDPTKVKAHGPG 1049
P + + +++ ++GL +V+V + G +P SP+ V+ + + A G G
Sbjct: 534 PKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRG 713
Query: 1050 LE--GGLVGKPAEFTIDTKXXXXXXXXXXVEGP--CEAKIECSDNGDG--TCSVSYLPTK 1103
++ G V A+F + TK + GP E K + D Y P+K
Sbjct: 714 VQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSK 893
Query: 1104 PGEYFVNILFEEVHIPGSPFKADIEMPFDPSKVVASGPGLEHGKVGEPGIL 1154
PG Y +NI F + HI SPFK ++ P+ SK+ A GPGLE G V + +L
Sbjct: 894 PGNYIINITFGDQHISKSPFKIEVG-PYKESKIRAYGPGLEGGVVQQKAVL 1043
Score = 43.5 bits (101), Expect(2) = 4e-29, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Frame = +2
Query: 1176 AKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPAWVKVEPAIDTSGIK--A 1233
++A++ +N DG+ V Y+P G Y + + E +P P ++PA D K A
Sbjct: 1097 SQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIA 1276
Query: 1234 FGPGIEGKDVFREATTDFTVDSR-----PLTQVGGD 1264
GPG+E V +FTVD++ PL G D
Sbjct: 1277 KGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVITGMD 1384
Score = 85.5 bits (210), Expect(2) = 2e-26, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 19/286 (6%)
Frame = +3
Query: 1766 KGEITGTVHMPSGKKATPEIVDNKDGTVT--VRYAPTEVGLHEMHIKYRGSHIPGNPLQF 1823
KG++ ++ P G + T E+ N D +T Y PT G ++++I + I +P
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1824 YVNYP--NSGSVSAYGPGLVYG--VANKTATFTIVTEDAGEGGLDLAIEGPS------KA 1873
V ++ V+A GPGL VA K F + + AG G +D+ I P +
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRP 536
Query: 1874 EISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI---TGRLCCFFSDDNR 1930
++ +KD T V Y+ G +S+ V + IP SPF ++ + C+ +
Sbjct: 537 KVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGV 716
Query: 1931 RCSQVKLGSAADFLLDISETDLSTLTASIKAPSGRDEPCLLKRLPNNH--IGISFIPREV 1988
+ V++ ADF + + I P G +E C LK++P+ + P +
Sbjct: 717 QPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKP 896
Query: 1989 GEHLVSIKKNGNHVANSPVSIMVVQSEIGDARRAKV--YGQGLSEG 2032
G ++++I H++ SP I E+G + +K+ YG GL G
Sbjct: 897 GNYIINITFGDQHISKSPFKI-----EVGPYKESKIRAYGPGLEGG 1019
Score = 54.7 bits (130), Expect(2) = 2e-26, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%)
Frame = +2
Query: 2028 GLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVDIQTEDLEDGTCKVSYFPTVPGVYI 2087
G +EGR F V+T + G + ++EGPS+ I+ D DG+ V Y PT+PG Y
Sbjct: 1022 GAAEGR------FTVET-NGETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYA 1180
Query: 2088 VSTKFADEHVPGSPFTVKI 2106
V +DE +P SPF I
Sbjct: 1181 VHILCSDEDIPKSPFMADI 1237
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 134/250 (53%), Gaps = 14/250 (5%)
Frame = +3
Query: 2253 AEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSPYLVPVIAPSDDARCLTVL-- 2310
E+ F++ +N + +Y+ G+Y+V+I F ++ I SP+ V V + DA +T
Sbjct: 228 CEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTVEGAAGDASKVTASGP 407
Query: 2311 SLQESGLKVNQPASFAIRLNGA-KGKIDAKVHSPSGAVEECHVS-ELEPDK---YAVRFI 2365
L+++G+ + F + + GA GK+D + P G + + PDK Y V ++
Sbjct: 408 GLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKVQSAPDKDATYLVEYV 587
Query: 2366 PHENGIHTIDVKFNGSHVVGSPFKVRVGEPGQAGNPALVSAYGAGLETGTTGI--QSEFF 2423
+ G+H+++V F GS + SPF V+V A N A G G++ + +++F+
Sbjct: 588 TIDQGLHSVNVFFAGSQIPNSPFGVQVAP---ASNAKACYATGRGVQPRGVRVKDRADFY 758
Query: 2424 INTTQAGPGTLSVTIEGPSKVKMDCQ-----EIPEGYKVMYTPMAPGNYLIGVKYGGPNH 2478
++T AG G ++V I GP V+ CQ + PE ++ +Y P PGNY+I + +G H
Sbjct: 759 VHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGD-QH 935
Query: 2479 ISRSPFKAKV 2488
IS+SPFK +V
Sbjct: 936 ISKSPFKIEV 965
Score = 75.1 bits (183), Expect(2) = 2e-24, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 13/282 (4%)
Frame = +3
Query: 1955 LTASIKAPSGRDEPCLLKRLPNNHIGIS--FIPREVGEHLVSIKKNGNHVANSPVSIMVV 2012
+ SI P G +E C ++ + ++ S ++P G + V+I +A SP ++ V
Sbjct: 186 VEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVTV- 362
Query: 2013 QSEIGDARRAKVYGQGLSEGRTF--EMSDFIVDTRDAGYGGISLAVEGPS------KVDI 2064
+ GDA + G GL + + + F V + AG G + + + P + +
Sbjct: 363 EGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRPKV 542
Query: 2065 QTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISGEGRVRESI-TRTSRAP 2123
Q+ +D T V Y G++ V+ FA +P SPF V+++ + T P
Sbjct: 543 QSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGVQP 722
Query: 2124 AVATVGSICDLNLKIPEINSSDMSAHVTSPSGHVTEAEI--VPMGKNSHCVRFVPQEMGV 2181
V D + +++ + P G + ++ VP + P + G
Sbjct: 723 RGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGN 902
Query: 2182 HTVSVKYRGQHVTGSPFQFTVGPLGEGGAHKVRAGGPGLERG 2223
+ +++ + QH++ SPF+ VGP E K+RA GPGLE G
Sbjct: 903 YIINITFGDQHISKSPFKIEVGPYKES---KIRAYGPGLEGG 1019
Score = 58.5 bits (140), Expect(2) = 2e-24, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Frame = +2
Query: 2241 GGLSIAVEGPSKAEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSPYLVPVIAP 2300
G L ++EGPS+A+I D+ +GS V Y+ PG Y V I +DE IP SP++ I P
Sbjct: 1067 GALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMAD-IKP 1243
Query: 2301 SDDARCLTVLS----LQESGLKVNQPASFAIRLNGA 2332
+ D V++ L++SG+ N+ A F + A
Sbjct: 1244 AADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAA 1351
Score = 80.5 bits (197), Expect(2) = 3e-24, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 14/297 (4%)
Frame = +3
Query: 974 QGKLDVTILSPSRKVVPCLVAPVAGRECS-TAKFIPREEGLFAVDVTYDGHPVPGSPYTV 1032
+G ++V+IL+P C V R + + ++P EG + V++ + + SP+TV
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1033 EAS-LPPDPTKVKAHGPGLE--GGLVGKPAEFTIDTKXXXXXXXXXXVEGP------CEA 1083
D +KV A GPGLE G + K F + K + P
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRP 536
Query: 1084 KIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSKVVASGPGL 1143
K++ + + D T V Y+ G + VN+ F IP SPF + + A+G G+
Sbjct: 537 KVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASNAKACYATGRGV 716
Query: 1144 EHG--KVGEPGILCVDCSEAGPGTLGLEAVSDSGAKAEVSIQNNKDG--TYAVTYVPLTA 1199
+ +V + V AG G + ++ + G + + ++ D + Y P
Sbjct: 717 QPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKP 896
Query: 1200 GMYTLTMKYGGELVPHFPAWVKVEPAIDTSGIKAFGPGIEGKDVFREATTDFTVDSR 1256
G Y + + +G + + P ++V P + S I+A+GPG+EG V ++A + +R
Sbjct: 897 GNYIINITFGDQHISKSPFKIEVGPYKE-SKIRAYGPGLEGGVVQQKAVLLWRPTAR 1064
Score = 52.0 bits (123), Expect(2) = 3e-24, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +2
Query: 1270 ITNPSGASTECFVKDNADGTYQVEYTPFEKGFHVVEVTYDDVPIPNSPFKVAVTEGC--Q 1327
I PS A EC DN DG+ V Y P G + V + D IP SPF +
Sbjct: 1085 IEGPSQAQIECL--DNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFD 1258
Query: 1328 PSRVHAQGPGLKEAFT--NKSNVFTVVTRGAGIGGLGIT 1364
+V A+GPGL+++ NK FTV T+ AG L IT
Sbjct: 1259 AEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVIT 1375
Score = 72.4 bits (176), Expect(2) = 5e-23, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 78/176 (44%)
Frame = +3
Query: 190 DPRKPVDNAREAMQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQFXXXXXXXXXXXX 249
DP DN R +Q A D V E + D HSV + +
Sbjct: 504 DPHGRKDNVRPKVQSAPDKDATYLV----EYVTIDQGLHSVNVFFAGSQIPNSPFGVQVA 671
Query: 250 XXXXXXXXRAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEGNKEEARVTPDS 309
A GRG++P G VK A F V T AG G+V V + P G +E+ ++
Sbjct: 672 PASNAKACYATGRGVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVP 851
Query: 310 DKNKTYSVEYLPKVTGLHKVIVLFAGQHISKSPFEVNVDKAQGDASKVTAKGPGLE 365
D+ + + Y P G + + + F QHISKSPF++ V + SK+ A GPGLE
Sbjct: 852 DQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKIEVGPYK--ESKIRAYGPGLE 1013
Score = 55.8 bits (133), Expect(2) = 5e-23, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 377 FDIYTAGAGVGDIGIEVEDPQGKNSVELLVEDRGNQVYRCVYKPVQPGPHVVKVSFAGDA 436
F + T G G +G +E P + +E L D G+ Y P PG + V + + +
Sbjct: 1040 FTVETNGE-TGALGFSIEGPS-QAQIECL--DNGDGSADVWYLPTMPGEYAVHILCSDED 1207
Query: 437 IPKSPFGVQIGEACNPNACR--ASGRGLQPKGVRIRETADFKVDTKAAGSGELGVT 490
IPKSPF I A + +A + A G GL+ GV + A+F VDTKAAG L +T
Sbjct: 1208 IPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVIT 1375
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 135/313 (43%), Gaps = 10/313 (3%)
Frame = +3
Query: 1549 EGLLAVQITDQEGKPQRATVHDNKDG--TYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRI 1606
+G + V I + +G + V N D TY+ Y+P G Y + + + I SP+ +
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1607 RAT-QTGDASKCLATGPGIAPT-VKTGEEVGFVVDAKTAGKGKVTCVILTP----DGTEA 1660
GDASK A+GPG+ T V ++ F V K AG GKV VIL P D
Sbjct: 357 TVEGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVRP 536
Query: 1661 EADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMVSRVPSPEPALTSRSTS 1720
+ ++D TY + Y G + + V F G IPNSPF V V+ PA +++
Sbjct: 537 KVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVA------PASNAKA-- 692
Query: 1721 TCWKLGEGRAQAVGSWVTEEAYVPVSDMNGLGFKPFDLVIPFAVRKGEITGTVHMPSG-- 1778
C+ G G Q G V + A V G G GE+ + P G
Sbjct: 693 -CYATGRG-VQPRGVRVKDRADFYVH-TKGAG-------------DGEVAVQIIGPGGVE 824
Query: 1779 KKATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQFYVNYPNSGSVSAYGP 1838
+K + V ++ Y P++ G + ++I + HI +P + V + AYGP
Sbjct: 825 EKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKIEVGPYKESKIRAYGP 1004
Query: 1839 GLVYGVANKTATF 1851
GL GV + A
Sbjct: 1005 GLEGGVVQQKAVL 1043
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = +2
Query: 1048 PGLEGGLVGKPAEFTIDTKXXXXXXXXXXVEGPCEAKIECSDNGDGTCSVSYLPTKPGEY 1107
PG GG FT++T +EGP +A+IEC DNGDG+ V YLPT PGEY
Sbjct: 1007 PGRRGGAA--EGRFTVETNGETGALGFS-IEGPSQAQIECLDNGDGSADVWYLPTMPGEY 1177
Query: 1108 FVNILFEEVHIPGSPFKADIE--MPFDPSKVVASGPGLEHGKV 1148
V+IL + IP SPF ADI+ FD KV+A GPGLE V
Sbjct: 1178 AVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGV 1306
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 121/287 (42%), Gaps = 14/287 (4%)
Frame = +3
Query: 1645 KGKVTCVILTPDGTEAEADVIENEDG--TYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTV 1702
KG V IL P G E +V N D TY Y G Y + + F I SPFTV
Sbjct: 177 KGDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTV 356
Query: 1703 MVSRVPSPEPALTSRSTSTCWKLGEGRAQAVGSWVTEEAYVPVSDMNGLGFKPFDLVIPF 1762
V +T+ G G + G T++ + V + G G D+VI
Sbjct: 357 TVEGAAGDASKVTAS--------GPG-LEKTGVVATKKTFFEVF-VKGAGNGKVDVVI-- 500
Query: 1763 AVRKGEITGTVHMPSGKK--ATPEI--VDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPG 1818
P G+K P++ +KD T V Y + GLH +++ + GS IP
Sbjct: 501 -----------LDPHGRKDNVRPKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPN 647
Query: 1819 NPLQFYVNYPNSGSVSAYGPGL---VYGVANK-TATFTIVTEDAGEGGLDLAIEGPSKAE 1874
+P V P S + + Y G GV K A F + T+ AG+G + + I GP E
Sbjct: 648 SPFGVQVA-PASNAKACYATGRGVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVE 824
Query: 1875 ISC----IDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI 1917
C + ++ Y P+ PG+Y I + + D+HI SPF ++
Sbjct: 825 EKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKIEV 965
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 124/300 (41%), Gaps = 14/300 (4%)
Frame = +3
Query: 2333 KGKIDAKVHSPSGAVEECHVSELEPDK---YAVRFIPHENGIHTIDVKFNGSHVVGSPFK 2389
KG ++ + +P G E C V E D+ Y+ ++P G + +++ F + SPF
Sbjct: 177 KGDVEVSILNPKGVEETCEV-EFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFT 353
Query: 2390 VRVGEPGQAGNPALVSAYGAGLE-TGTTGIQSEFF-INTTQAGPGTLSVTIEGP----SK 2443
V V G AG+ + V+A G GLE TG + FF + AG G + V I P
Sbjct: 354 VTV--EGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDN 527
Query: 2444 VKMDCQEIPEG---YKVMYTPMAPGNYLIGVKYGGPNHISRSPFKAKVTGQRLVSPGSAN 2500
V+ Q P+ Y V Y + G + + V + G + I SPF +V
Sbjct: 528 VRPKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAG-SQIPNSPFGVQVA----------- 671
Query: 2501 ETSSILVESVTRSSTETCYSAIPKSSSDASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSN 2560
P S++ A T +G V ++ F V AG
Sbjct: 672 ----------------------PASNAKACYATGRGVQPRGVRVKDRADFYVHTKGAGDG 785
Query: 2561 MLLIGVHGPTTPCEEVSMKHVGKQQ--YNVTYVVKERGDYVLAVKWGEEHIPGSPFHVTV 2618
+ + + GP E+ +K V Q + Y + G+Y++ + +G++HI SPF + V
Sbjct: 786 EVAVQIIGPGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKIEV 965
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +2
Query: 1349 FTVVTRGAGIGGLGITVEGPSESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGVHIPG 1408
FTV T G G LG ++EGPS+++I C DN DGS Y+P PG+Y V+I IP
Sbjct: 1040 FTVETNGE-TGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPK 1216
Query: 1409 SPFRV---PSKDVVDPSKVKIAGPGLS-SCVRACIPQSFTVDSSKAGLAPLEV 1457
SPF P+ D D KV GPGL S V FTVD+ AG APL +
Sbjct: 1217 SPFMADIKPAAD-FDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Frame = +2
Query: 797 FDIIHNANDTFTVKYVPPAPGRYTIKVLFASQEIPASPFRVKVDPS--HDASKVKAEGPG 854
+ + N + + V Y+P PG Y + +L + ++IP SPF + P+ DA KV A+GPG
Sbjct: 1109 IECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPG 1288
Query: 855 LSKAGVENGKPTHFTVHTKGAGKAPLNV 882
L K+GV K FTV TK AGKAPL +
Sbjct: 1289 LEKSGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 20/268 (7%)
Frame = +3
Query: 2050 GGISLAVEGPSKVD----IQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVK 2105
G + +++ P V+ ++ + + T +Y PT+ G Y V+ FA++ + SPFTV
Sbjct: 180 GDVEVSILNPKGVEETCEVEFNNDRNLTYSCAYVPTMEGHYKVNILFANKVIAKSPFTVT 359
Query: 2106 ISGEGRVRESITRTSRAPAVATVGSICD----LNLKIPEINSSDMSAHVTSPSGHVT--- 2158
+ EG ++ T+ P + G + + + + + + P G
Sbjct: 360 V--EGAAGDASKVTASGPGLEKTGVVATKKTFFEVFVKGAGNGKVDVVILDPHGRKDNVR 533
Query: 2159 -EAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGAHKVRAGG 2217
+ + P ++ V +V + G+H+V+V + G + SPF V P A A G
Sbjct: 534 PKVQSAPDKDATYLVEYVTIDQGLHSVNVFFAGSQIPNSPFGVQVAPASN--AKACYATG 707
Query: 2218 PGLE-RG-EAGIPAEFSIWTREAGAGGLSIAVEGPSKAEITF------DDHKNGSCGVSY 2269
G++ RG A+F + T+ AG G +++ + GP E D + C Y
Sbjct: 708 RGVQPRGVRVKDRADFYVHTKGAGDGEVAVQIIGPGGVEEKCQLKKVPDQPEVWEC--VY 881
Query: 2270 IAQEPGNYEVSIKFNDEHIPDSPYLVPV 2297
+PGNY ++I F D+HI SP+ + V
Sbjct: 882 NPSKPGNYIINITFGDQHISKSPFKIEV 965
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 1838 PGLVYGVANKTATFTIVTEDAGE-GGLDLAIEGPSKAEISCIDNKDGTCTVTYLPTLPGD 1896
PG G A FT+ T GE G L +IEGPS+A+I C+DN DG+ V YLPT+PG+
Sbjct: 1007 PGRRGGAAE--GRFTVETN--GETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGE 1174
Query: 1897 YSILVKYNDKHIPGSPFTAKI 1917
Y++ + +D+ IP SPF A I
Sbjct: 1175 YAVHILCSDEDIPKSPFMADI 1237
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +2
Query: 276 KFTVDTISAGQGDVMVFVEDPEGNKEEARVTPDSDKNKTYSVEYLPKVTGLHKVIVLFAG 335
+FTV+T + G + +E P +A++ + + + V YLP + G + V +L +
Sbjct: 1037 RFTVET-NGETGALGFSIEGPS----QAQIECLDNGDGSADVWYLPTMPGEYAVHILCSD 1201
Query: 336 QHISKSPFEVNVD-KAQGDASKVTAKGPGLETTGNIANKPTYFDIYTAGAG 385
+ I KSPF ++ A DA KV AKGPGLE +G NK F + T AG
Sbjct: 1202 EDIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAG 1354
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Frame = +2
Query: 1547 AGEGLLAVQITDQEGK-------PQRATVH--DNKDGTYAVTYIPDKTGRYMIGVTYGGD 1597
A EG V+ + G P +A + DN DG+ V Y+P G Y + + +
Sbjct: 1025 AAEGRFTVETNGETGALGFSIEGPSQAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDE 1204
Query: 1598 NIPLSPYR--IRATQTGDASKCLATGPGIAPT-VKTGEEVGFVVDAKTAGKGKVTCVILT 1654
+IP SP+ I+ DA K +A GPG+ + V + F VD K AGK + +
Sbjct: 1205 DIPKSPFMADIKPAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPLVITGMD 1384
Query: 1655 PD 1656
D
Sbjct: 1385 TD 1390
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +2
Query: 1767 GEITGTVHMPSGKKATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQFYVN 1826
G + ++ PS +A E +DN DG+ V Y PT G + +HI IP +P +
Sbjct: 1067 GALGFSIEGPS--QAQIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIK 1240
Query: 1827 YP---NSGSVSAYGPGL-VYGVA-NKTATFTIVTEDAGEGGL 1863
++ V A GPGL GVA NK A FT+ T+ AG+ L
Sbjct: 1241 PAADFDAEKVIAKGPGLEKSGVAPNKWAEFTVDTKAAGKAPL 1366
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 694 IQMKSRMDGTYACSYTPLKAIKHTIAVVWGGVNIPHSPYRVNIGQGSH--PQKVKVFGPG 751
I+ DG+ Y P ++ + ++ +IP SP+ +I + +KV GPG
Sbjct: 1109 IECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGPG 1288
Query: 752 VERSGLKANEPTHFTVDCTEAGE 774
+E+SG+ N+ FTVD AG+
Sbjct: 1289 LEKSGVAPNKWAEFTVDTKAAGK 1357
Score = 38.9 bits (89), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +2
Query: 2159 EAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGAHKVRAGGP 2218
+ E + G S V ++P G + V + + + SPF + P + A KV A GP
Sbjct: 1106 QIECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFMADIKPAADFDAEKVIAKGP 1285
Query: 2219 GLERGEAGIP----AEFSIWTREAGAGGLSI 2245
GLE+ +G+ AEF++ T+ AG L I
Sbjct: 1286 GLEK--SGVAPNKWAEFTVDTKAAGKAPLVI 1372
Score = 38.5 bits (88), Expect = 0.038, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 832 ASPFRVKVDPSHDASKVKAEGPGLSKAGVENGKPTHFTVHTKGAGKAPLNVQFSS 886
+P R +++P+ +V+A GPGL G + G P FTV T AG+ FS+
Sbjct: 55 GAPLRPRLNPA----RVRAYGPGLEPKGNQVGAPARFTVETFSAGRGMWRCLFST 207
Score = 37.0 bits (84), Expect = 0.11, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +1
Query: 1026 PGSPYTVEASLPP--DPTKVKAHGPGLE--GGLVGKPAEFTIDT 1065
P + A L P +P +V+A+GPGLE G VG PA FT++T
Sbjct: 34 PNAKLKAGAPLRPRLNPARVRAYGPGLEPKGNQVGAPARFTVET 165
Score = 35.0 bits (79), Expect = 0.44, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 741 HPQKVKVFGPGVERSGLKANEPTHFTVDCTEAGEG 775
+P +V+ +GPG+E G + P FTV+ AG G
Sbjct: 79 NPARVRAYGPGLEPKGNQVGAPARFTVETFSAGRG 183
>17351
Length = 654
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 150/216 (69%)
Frame = -1
Query: 2141 INSSDMSAHVTSPSGHVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQF 2200
I S D++A VTSPS +AEI + + V FVP+E+GVHTVSV+Y H+ GSPFQF
Sbjct: 654 ITSFDLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQF 475
Query: 2201 TVGPLGEGGAHKVRAGGPGLERGEAGIPAEFSIWTREAGAGGLSIAVEGPSKAEITFDDH 2260
TVGPL + G+H V+AGG GLERG G PAEF++WTREAG G L+I+VEGPSKA+I F D
Sbjct: 474 TVGPLRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDR 295
Query: 2261 KNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSPYLVPVIAPSDDARCLTVLSLQESGLKVN 2320
K+GSC VSY EPG Y V +KFND HIPDSP+ V + + DA L V + ++ +
Sbjct: 294 KDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQGNIQAD 115
Query: 2321 QPASFAIRLNGAKGKIDAKVHSPSGAVEECHVSELE 2356
P F +R NGAKG++DAK+ +PSG ++C + ++
Sbjct: 114 APYQFMVRKNGAKGELDAKIVAPSGTDDDCFIQAID 7
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Frame = -1
Query: 1768 EITGTVHMPSGKKATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQFYVN- 1826
++ V PS EI + +DG +V + P E+G+H + ++Y HIPG+P QF V
Sbjct: 642 DLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGP 463
Query: 1827 YPNSGS--VSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKAEISCIDNKDGT 1884
+SGS V A G GL GV + A F + T +AG G L +++EGPSKA+I D KDG+
Sbjct: 462 LRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGS 283
Query: 1885 CTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITGRLCCFFSDDNRRCSQVKLGSAADFL 1944
C V+Y T PG+Y + +K+ND+HIP SPF I+ + ++ Q + + A +
Sbjct: 282 CDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQGNIQADAPYQ 103
Query: 1945 LDISETDLS-TLTASIKAPSGRDEPCLLKRL 1974
+ + L A I APSG D+ C ++ +
Sbjct: 102 FMVRKNGAKGELDAKIVAPSGTDDDCFIQAI 10
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 114/215 (53%), Gaps = 3/215 (1%)
Frame = -1
Query: 484 SGELGVTVKGPKGLEELVKQKGFLDGVYSFEYYPSTPGKYSVAVTWGGHHIPKSPFEVQV 543
S +L V P + E + + DG+YS + P G ++V+V + HIP SPF+ V
Sbjct: 648 SFDLAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTV 469
Query: 544 GP--EAGMQKVRAWGPGLHGGIVGRSADFVVESIGSEVGTLGFAIEGPSQAKIEYDDQND 601
GP ++G V+A G GL G+VG A+F V + + G+L ++EGPS+A IE+ D+ D
Sbjct: 468 GPLRDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKD 289
Query: 602 GSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPATGDYNPDLVQAYGPGLEKSGCT 661
GSCDV Y EPGEY V + +D I DSP+ +I P GD + VQ + G
Sbjct: 288 GSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQG----NIQ 121
Query: 662 INNPAEFIVDPKDA-GSAPLKILAQDGEGQPIDIQ 695
+ P +F+V A G KI+A G IQ
Sbjct: 120 ADAPYQFMVRKNGAKGELDAKIVAPSGTDDDCFIQ 16
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 87/153 (56%)
Frame = -1
Query: 1955 LTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQS 2014
L A + +PS E ++ + + + F+P+E+G H VS++ + H+ SP V
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 2015 EIGDARRAKVYGQGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVDIQTEDLEDGTC 2074
+ K G GL G E ++F V TR+AG G ++++VEGPSK DI+ +D +DG+C
Sbjct: 459 RDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSC 280
Query: 2075 KVSYFPTVPGVYIVSTKFADEHVPGSPFTVKIS 2107
VSY T PG Y V KF D H+P SPF V IS
Sbjct: 279 DVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYIS 181
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 3/202 (1%)
Frame = -1
Query: 1266 IKAQITNPSGASTECFVKDNADGTYQVEYTPFEKGFHVVEVTYDDVPIPNSPFKVAV--T 1323
+ A +T+PS + + +++ DG Y V + P E G H V V Y ++ IP SPF+ V
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1324 EGCQPSRVHAQGPGLKEAFTNKSNVFTVVTRGAGIGGLGITVEGPSESKINCRDNKDGSC 1383
V A G GL+ + F V TR AG G L I+VEGPS++ I +D KDGSC
Sbjct: 459 RDSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSC 280
Query: 1384 SAEYIPFAPGDYDVNITYGGVHIPGSPFRV-PSKDVVDPSKVKIAGPGLSSCVRACIPQS 1442
Y PG+Y V + + HIP SPF+V S D D K+++ + ++A P
Sbjct: 279 DVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQGN-IQADAPYQ 103
Query: 1443 FTVDSSKAGLAPLEVRVLGPRG 1464
F V + A L+ +++ P G
Sbjct: 102 FMVRKNGAK-GELDAKIVAPSG 40
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Frame = -1
Query: 2338 AKVHSPSGAVEECHVSELEPDKYAVRFIPHENGIHTIDVKFNGSHVVGSPFKVRVGEPGQ 2397
A V SPS E+ + E+E Y+V F+P E G+HT+ V+++ H+ GSPF+ VG P +
Sbjct: 633 ACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVG-PLR 457
Query: 2398 AGNPALVSAYGAGLETGTTGIQSEFFINTTQAGPGTLSVTIEGPSKVKMDCQEIPEGY-K 2456
LV A G+GLE G G +EF + T +AG G+L++++EGPSK ++ ++ +G
Sbjct: 456 DSGSHLVKAGGSGLERGVVGEPAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSCD 277
Query: 2457 VMYTPMAPGNYLIGVKYGGPNHISRSPFKAKVT 2489
V Y PG Y +G+K+ HI SPFK ++
Sbjct: 276 VSYKVTEPGEYRVGLKFND-RHIPDSPFKVYIS 181
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Frame = -1
Query: 1003 TAKFIPREEGLFAVDVTYDGHPVPGSPYTVEASLPPDPTK--VKAHGPGLEGGLVGKPAE 1060
+ F+P+E G+ V V Y +PGSP+ D VKA G GLE G+VG+PAE
Sbjct: 564 SVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVKAGGSGLERGVVGEPAE 385
Query: 1061 FTIDTKXXXXXXXXXXVEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPG 1120
F + T+ VEGP +A IE D DG+C VSY T+PGEY V + F + HIP
Sbjct: 384 FNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSCDVSYKVTEPGEYRVGLKFNDRHIPD 205
Query: 1121 SPFKADI 1127
SPFK I
Sbjct: 204 SPFKVYI 184
Score = 83.6 bits (205), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Frame = -1
Query: 1455 LEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPT 1514
L V P + E + + DG ++V + P + G + VSV+Y++ IP SPF+ V P
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1515 YDASK--VTASGPGLSAYGVPASLPVEFAIDARDAGEGLLAVQITDQEGKPQRATVH--D 1570
D+ V A G GL GV P EF + R+AG G LA+ + EG P +A + D
Sbjct: 459 RDSGSHLVKAGGSGLER-GVVGE-PAEFNVWTREAGGGSLAISV---EG-PSKADIEFKD 298
Query: 1571 NKDGTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRIRAT-QTGDASKCLATGPGIAPTVK 1629
KDG+ V+Y + G Y +G+ + +IP SP+++ + GDA K L ++
Sbjct: 297 RKDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHK-LEVQQFPQGNIQ 121
Query: 1630 TGEEVGFVVDAKTAGKGKVTCVILTPDGTE 1659
F+V K KG++ I+ P GT+
Sbjct: 120 ADAPYQFMV-RKNGAKGELDAKIVAPSGTD 34
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Frame = -1
Query: 796 DFDIIHNANDTFTVKYVPPAPGRYTIKVLFASQEIPASPFRVKVDPSHDASK--VKAEGP 853
D +I + ++V +VP G +T+ V ++ IP SPF+ V P D+ VKA G
Sbjct: 600 DAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVKAGGS 421
Query: 854 GLSKAGVENGKPTHFTVHTKGAGKAPLNVQFSSPLPGEAVKDLDIIDNYDYSHTVKYTPT 913
GL + V G+P F V T+ AG L + P + D++ D D S V Y T
Sbjct: 420 GLERGVV--GEPAEFNVWTREAGGGSLAISVEGP----SKADIEFKDRKDGSCDVSYKVT 259
Query: 914 QQGNMQVLVTYGGDPIPKSPFTVGVAAPL-DLSKIKINGL-ENRVEVGKDQEFAIDTNGA 971
+ G +V + + IP SPF V ++ D K+++ + ++ +F + NGA
Sbjct: 258 EPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQQFPQGNIQADAPYQFMVRKNGA 79
Query: 972 GGQGKLDVTILSPSRKVVPCLVAPVAGR 999
+G+LD I++PS C + + G
Sbjct: 78 --KGELDAKIVAPSGTDDDCFIQAIDGE 1
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 6/198 (3%)
Frame = -1
Query: 1092 DGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSK--VVASGPGLEHGKVG 1149
DG SV ++P + G + V++ + E+HIPGSPF+ + D V A G GLE G VG
Sbjct: 576 DGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVKAGGSGLERGVVG 397
Query: 1150 EPGILCVDCSEAGPGTLGLEAVSDSG-AKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKY 1208
EP V EAG G+L A+S G +KA++ ++ KDG+ V+Y G Y + +K+
Sbjct: 396 EPAEFNVWTREAGGGSL---AISVEGPSKADIEFKDRKDGSCDVSYKVTEPGEYRVGLKF 226
Query: 1209 GGELVPHFPAWVKVEPAIDTSG---IKAFGPGIEGKDVFREATTDFTVDSRPLTQVGGDH 1265
+P P V + P + ++ F G ++ +A F V R G
Sbjct: 225 NDRHIPDSPFKVYISPDAGDAHKLEVQQFPQG----NIQADAPYQFMV--RKNGAKG--E 70
Query: 1266 IKAQITNPSGASTECFVK 1283
+ A+I PSG +CF++
Sbjct: 69 LDAKIVAPSGTDDDCFIQ 16
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 4/216 (1%)
Frame = -1
Query: 288 DVMVFVEDPEGNKEEARVTPDSDKNKTYSVEYLPKVTGLHKVIVLFAGQHISKSPFEVNV 347
D+ V P E+A + D YSV ++PK G+H V V ++ HI SPF+ V
Sbjct: 642 DLAACVTSPSNVTEDAEIQEIEDG--LYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTV 469
Query: 348 DKAQGDASK-VTAKGPGLETTGNIANKPTYFDIYTAGAGVGDIGIEVEDPQGKNSVELLV 406
+ S V A G GLE + +P F+++T AG G + I VE P + ++
Sbjct: 468 GPLRDSGSHLVKAGGSGLER--GVVGEPAEFNVWTREAGGGSLAISVEGP---SKADIEF 304
Query: 407 EDRGNQVYRCVYKPVQPGPHVVKVSFAGDAIPKSPFGVQIGEACNPNACRASGRGLQ--P 464
+DR + YK +PG + V + F IP SPF V I +P+A A +Q P
Sbjct: 303 KDRKDGSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYI----SPDAGDAHKLEVQQFP 136
Query: 465 KGVRIRETADFKVDTKAAGS-GELGVTVKGPKGLEE 499
+G I+ A ++ + G+ GEL + P G ++
Sbjct: 135 QG-NIQADAPYQFMVRKNGAKGELDAKIVAPSGTDD 31
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 5/200 (2%)
Frame = -1
Query: 693 DIQMKSRMDGTYACSYTPLKAIKHTIAVVWGGVNIPHSPYRVNIG----QGSHPQKVKVF 748
D +++ DG Y+ + P + HT++V + ++IP SP++ +G GSH VK
Sbjct: 600 DAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSH--LVKAG 427
Query: 749 GPGVERSGLKANEPTHFTVDCTEAGEGDVSVGIKCDARVLSDDEEDVDFDIIHNANDTFT 808
G G+ER + EP F V EAG G +++ ++ ++ D + + +
Sbjct: 426 GSGLERGVV--GEPAEFNVWTREAGGGSLAISVEGPSK--------ADIEFKDRKDGSCD 277
Query: 809 VKYVPPAPGRYTIKVLFASQEIPASPFRVKVDP-SHDASKVKAEGPGLSKAGVENGKPTH 867
V Y PG Y + + F + IP SPF+V + P + DA K++ + + ++ P
Sbjct: 276 VSYKVTEPGEYRVGLKFNDRHIPDSPFKVYISPDAGDAHKLEVQ--QFPQGNIQADAPYQ 103
Query: 868 FTVHTKGAGKAPLNVQFSSP 887
F V GA K L+ + +P
Sbjct: 102 FMVRKNGA-KGELDAKIVAP 46
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Frame = -1
Query: 1552 LAVQITDQEGKPQRATVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRIRATQT 1611
LA +T + A + + +DG Y+V ++P + G + + V Y +IP SP++
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPL 460
Query: 1612 GDASKCL--ATGPGIAPTVKTGEEVGFVVDAKTAGKGKVTCVILTPDGTEAEADVIENED 1669
D+ L A G G+ V GE F V + AG G + + P ++A+ + + +D
Sbjct: 459 RDSGSHLVKAGGSGLERGV-VGEPAEFNVWTREAGGGSLAISVEGP--SKADIEFKDRKD 289
Query: 1670 GTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMVS 1705
G+ D+ Y +PG Y + ++F IP+SPF V +S
Sbjct: 288 GSCDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYIS 181
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Frame = -1
Query: 1172 SDSGAKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPAWVKVEPAIDTSG- 1230
S S + IQ +DG Y+V +VP G++T++++Y +P P V P D+
Sbjct: 621 SPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYSEMHIPGSPFQFTVGPLRDSGSH 442
Query: 1231 -IKAFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAQITNPSGASTECFVKDNADGT 1289
+KA G G+E V A +F V +R + GG + + PS A E KD DG+
Sbjct: 441 LVKAGGSGLERGVVGEPA--EFNVWTR---EAGGGSLAISVEGPSKADIE--FKDRKDGS 283
Query: 1290 YQVEYTPFEKGFHVVEVTYDDVPIPNSPFKVAVT 1323
V Y E G + V + ++D IP+SPFKV ++
Sbjct: 282 CDVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYIS 181
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 3/188 (1%)
Frame = -1
Query: 2434 LSVTIEGPSKVKMDC--QEIPEG-YKVMYTPMAPGNYLIGVKYGGPNHISRSPFKAKVTG 2490
L+ + PS V D QEI +G Y V + P G + + V+Y HI SPF+
Sbjct: 639 LAACVTSPSNVTEDAEIQEIEDGLYSVHFVPKELGVHTVSVRYS-EMHIPGSPFQ----- 478
Query: 2491 QRLVSPGSANETSSILVESVTRSSTETCYSAIPKSSSDASKVTSKGAGLSKAFVGQKSSF 2550
++ P S + V + G+GL + VG+ + F
Sbjct: 477 ----------------------------FTVGPLRDSGSHLVKAGGSGLERGVVGEPAEF 382
Query: 2551 LVDCSKAGSNMLLIGVHGPTTPCEEVSMKHVGKQQYNVTYVVKERGDYVLAVKWGEEHIP 2610
V +AG L I V GP+ ++ K +V+Y V E G+Y + +K+ + HIP
Sbjct: 381 NVWTREAGGGSLAISVEGPSKA--DIEFKDRKDGSCDVSYKVTEPGEYRVGLKFNDRHIP 208
Query: 2611 GSPFHVTV 2618
SPF V +
Sbjct: 207 DSPFKVYI 184
>29446
Length = 1445
Score = 202 bits (513), Expect = 2e-51, Method: Composition-based stats.
Identities = 97/153 (63%), Positives = 121/153 (79%), Gaps = 2/153 (1%)
Frame = +3
Query: 4 TEKDLAEDAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMH 63
TE++LAEDA WK IQ+NTFTRW NEHL+ VNK I +L++D SDGLRL+AL+EVLS K+
Sbjct: 960 TERELAEDAQWKIIQKNTFTRWANEHLRTVNKAIADLESDFSDGLRLVALIEVLSGKKFK 1139
Query: 64 HKYHQRPTFRQMKLENVSVALEFL-DHESIKLVSIDSKAIVDGNLKLILGLVWTLILHYS 122
H ++RP FR KLENV++ L+FL D E I++V+IDS IVD LKLILGL+WTLILHYS
Sbjct: 1140 H-VNKRPNFRTQKLENVTLTLKFLEDDEGIRIVNIDSTDIVDKKLKLILGLIWTLILHYS 1316
Query: 123 ISMPVWEDEGDDDAK-KQTPKQRLLGWIQNKIP 154
ISMP+WE E ++ TPKQRLL WIQ+K+P
Sbjct: 1317 ISMPMWEGEEPTPSEGGPTPKQRLLNWIQSKVP 1415
>19277
Length = 511
Score = 157 bits (397), Expect(2) = 7e-44, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 101/131 (77%), Gaps = 2/131 (1%)
Frame = +2
Query: 2011 VVQSEIGDARRAKVYGQGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVDIQTEDLE 2070
V +SE+G+A + KV G GL+EG E+++F+VDTR+AGYGG+SL++EGPSK DI+ D E
Sbjct: 77 VGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNE 256
Query: 2071 DGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISGE--GRVRESITRTSRAPAVATV 2128
DGTC+V+Y PT PG YI++ KFAD+HVPGSP++VKI GE ++ E ITR A V V
Sbjct: 257 DGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTKITERITRHKAAADVTHV 436
Query: 2129 GSICDLNLKIP 2139
GS C+L+LKIP
Sbjct: 437 GSQCELSLKIP 469
Score = 40.8 bits (94), Expect(2) = 7e-44, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 1985 PREVGEHLVSIKKNGNHVANSPVSI 2009
PRE GEHLV++ +NG H+ANSP I
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKI 75
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%)
Frame = +2
Query: 1829 NSGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKAEISCIDNKDGTCTVT 1888
N+ V G GL G+AN+ F + T +AG GG+ L+IEGPSKA+I C DN+DGTC VT
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRVT 277
Query: 1889 YLPTLPGDYSILVKYNDKHIPGSPFTAKITGR 1920
Y PT PG Y I +K+ D+H+PGSP++ KI G
Sbjct: 278 YKPTEPGTYIINIKFADQHVPGSPYSVKIGGE 373
Score = 94.4 bits (233), Expect(2) = 9e-22, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 65/97 (67%)
Frame = +2
Query: 2201 TVGPLGEGGAHKVRAGGPGLERGEAGIPAEFSIWTREAGAGGLSIAVEGPSKAEITFDDH 2260
+VG G A KV+ G GL G A EF + TREAG GG+S+++EGPSKA+I D+
Sbjct: 74 SVGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDN 253
Query: 2261 KNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSPYLVPV 2297
++G+C V+Y EPG Y ++IKF D+H+P SPY V +
Sbjct: 254 EDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 30.0 bits (66), Expect(2) = 9e-22, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 2176 PQEMGVHTVSVKYRGQHVTGSPFQFTVG 2203
P+E G H V+V G+H+ SPF+ G
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKICRG 84
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Frame = +2
Query: 1314 PNSPFK-VAVTEGCQPSRVHAQGPGLKEAFTNKSNVFTVVTRGAGIGGLGITVEGPSESK 1372
P +P + V +E S+V G GL E N+ N F V TR AG GG+ +++EGPS++
Sbjct: 56 PTAPSRSVGESELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKAD 235
Query: 1373 INCRDNKDGSCSAEYIPFAPGDYDVNITYGGVHIPGSPFRV 1413
I C DN+DG+C Y P PG Y +NI + H+PGSP+ V
Sbjct: 236 IECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSV 358
Score = 88.2 bits (217), Expect(2) = 1e-17, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%)
Frame = +2
Query: 1039 DPTKVKAHGPGLEGGLVGKPAEFTIDTKXXXXXXXXXXVEGPCEAKIECSDNGDGTCSVS 1098
+ +KVK G GL G+ + EF +DT+ +EGP +A IEC DN DGTC V+
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRVT 277
Query: 1099 YLPTKPGEYFVNILFEEVHIPGSPFKADI 1127
Y PT+PG Y +NI F + H+PGSP+ I
Sbjct: 278 YKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 21.9 bits (45), Expect(2) = 1e-17, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 1008 PREEGLFAVDVTYDGHPVPGSPYTV 1032
PRE G V+V +G + SP+ +
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKI 75
Score = 69.7 bits (169), Expect(2) = 1e-15, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +2
Query: 2392 VGEPGQAGNPALVSAYGAGLETGTTGIQSEFFINTTQAGPGTLSVTIEGPSKVKMDCQEI 2451
VGE + GN + V G GL G +EF ++T +AG G +S++IEGPSK ++C +
Sbjct: 77 VGE-SELGNASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDN 253
Query: 2452 PEGY-KVMYTPMAPGNYLIGVKYGGPNHISRSPFKAKVTGQRLVSPGSANETSSILVESV 2510
+G +V Y P PG Y+I +K+ H+ SP+ K+ G E S+ + E +
Sbjct: 254 EDGTCRVTYKPTEPGTYIINIKF-ADQHVPGSPYSVKIGG----------EPSTKITERI 400
Query: 2511 TR 2512
TR
Sbjct: 401 TR 406
Score = 33.9 bits (76), Expect(2) = 1e-15, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 2366 PHENGIHTIDVKFNGSHVVGSPFKVRVGE 2394
P E G H ++V NG H+ SPFK+ GE
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKICRGE 87
Score = 68.9 bits (167), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%)
Frame = +2
Query: 551 KVRAWGPGLHGGIVGRSADFVVESIGSEVGTLGFAIEGPSQAKIEYDDQNDGSCDVKYWP 610
KV+ G GL G+ +FVV++ + G + +IEGPS+A IE D DG+C V Y P
Sbjct: 107 KVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCRVTYKP 286
Query: 611 KEPGEYAVHIMCDDEDIKDSPYMAFI 636
EPG Y ++I D+ + SPY I
Sbjct: 287 TEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 23.5 bits (49), Expect(2) = 2e-12, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 517 PSTPGKYSVAVTWGGHHIPKSPFEVQVG 544
P G++ V V G HI SPF++ G
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKICRG 84
Score = 66.2 bits (160), Expect(2) = 5e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +2
Query: 1407 PGSPFR-VPSKDVVDPSKVKIAGPGLSSCVRACIPQSFTVDSSKAGLAPLEVRVLGPRGL 1465
P +P R V ++ + SKVK++G GL+ + + + F VD+ +AG + + + GP
Sbjct: 56 PTAPSRSVGESELGNASKVKVSGDGLTEGMANEVNE-FVVDTREAGYGGMSLSIEGPSKA 232
Query: 1466 VEPVNVVDNGDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKV 1511
+ DN DGT VTY P++ G YI+++K+AD+ +P SP+ VK+
Sbjct: 233 --DIECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 25.0 bits (53), Expect(2) = 5e-12, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 1389 PFAPGDYDVNITYGGVHIPGSPFRV 1413
P G++ VN+ G HI SPF++
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKI 75
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Frame = +2
Query: 1600 PLSPYR-IRATQTGDASKCLATGPGIAPTVKTGEEVG-FVVDAKTAGKGKVTCVILTPDG 1657
P +P R + ++ G+ASK +G G+ T EV FVVD + AG G ++ I P
Sbjct: 56 PTAPSRSVGESELGNASKVKVSGDGL--TEGMANEVNEFVVDTREAGYGGMSLSIEGP-- 223
Query: 1658 TEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMVSRVPSPEPALTSR 1717
++A+ + +NEDGT + Y +PGTY+I ++F +P SP++V + PS + +T R
Sbjct: 224 SKADIECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTK--ITER 397
Query: 1718 ST 1719
T
Sbjct: 398 IT 403
Score = 55.8 bits (133), Expect(2) = 3e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%)
Frame = +2
Query: 1132 DPSKVVASGPGLEHGKVGEPGILCVDCSEAGPGTLGLEAVSDSGAKAEVSIQNNKDGTYA 1191
+ SKV SG GL G E VD EAG G + L + +KA++ +N+DGT
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSI--EGPSKADIECHDNEDGTCR 271
Query: 1192 VTYVPLTAGMYTLTMKYGGELVPHFPAWVKV 1222
VTY P G Y + +K+ + VP P VK+
Sbjct: 272 VTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 26.2 bits (56), Expect(2) = 3e-09, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 1101 PTKPGEYFVNILFEEVHIPGSPFK 1124
P + GE+ VN+ HI SPFK
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFK 72
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = +2
Query: 1516 DASKVTASGPGLSAYGVPASLPVEFAIDARDAGEGLLAVQITDQEGKPQRATV--HDNKD 1573
+ASKV SG GL+ G+ A+ EF +D R+AG G +++ I EG P +A + HDN+D
Sbjct: 98 NASKVKVSGDGLTE-GM-ANEVNEFVVDTREAGYGGMSLSI---EG-PSKADIECHDNED 259
Query: 1574 GTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRIR 1607
GT VTY P + G Y+I + + ++P SPY ++
Sbjct: 260 GTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVK 361
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Frame = +2
Query: 352 GDASKVTAKGPGLETTGNIANKPTYFDIYTAGAGVGDIGIEVEDPQGKNSVELLVEDRGN 411
G+ASKV G GL T +AN+ F + T AG G + + +E P + ++ D +
Sbjct: 95 GNASKVKVSGDGL--TEGMANEVNEFVVDTREAGYGGMSLSIEGP---SKADIECHDNED 259
Query: 412 QVYRCVYKPVQPGPHVVKVSFAGDAIPKSPFGVQIG 447
R YKP +PG +++ + FA +P SP+ V+IG
Sbjct: 260 GTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIG 367
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +2
Query: 728 PHSPYR-VNIGQGSHPQKVKVFGPGVERSGLKANEPTHFTVDCTEAGEGDVSVGIKCDAR 786
P +P R V + + KVKV G G+ ANE F VD EAG G +S+ I+ ++
Sbjct: 56 PTAPSRSVGESELGNASKVKVSGDGLTEG--MANEVNEFVVDTREAGYGGMSLSIEGPSK 229
Query: 787 VLSDDEEDVDFDIIHNANDTFTVKYVPPAPGRYTIKVLFASQEIPASPFRVKV 839
D + N + T V Y P PG Y I + FA Q +P SP+ VK+
Sbjct: 230 --------ADIECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 53.1 bits (126), Expect(2) = 6e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%)
Frame = +2
Query: 448 EACNPNACRASGRGLQPKGVRIRETADFKVDTKAAGSGELGVTVKGPKGLEELVKQKGFL 507
E N + + SG GL +G+ E +F VDT+ AG G + ++++GP + ++
Sbjct: 89 ELGNASKVKVSGDGLT-EGMA-NEVNEFVVDTREAGYGGMSLSIEGPSKAD--IECHDNE 256
Query: 508 DGVYSFEYYPSTPGKYSVAVTWGGHHIPKSPFEVQVGPE 546
DG Y P+ PG Y + + + H+P SP+ V++G E
Sbjct: 257 DGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGE 373
Score = 24.3 bits (51), Expect(2) = 6e-08, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 420 PVQPGPHVVKVSFAGDAIPKSPFGVQIGE 448
P + G H+V V G I SPF + GE
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPFKICRGE 87
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Frame = +2
Query: 2528 DASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGPTTPCEEVSMKHVGKQQYN 2587
+ASKV G GL++ + + F+VD +AG + + + GP+ E G +
Sbjct: 98 NASKVKVSGDGLTEGMANEVNEFVVDTREAGYGGMSLSIEGPSKADIECHDNEDGTCR-- 271
Query: 2588 VTYVVKERGDYVLAVKWGEEHIPGSPFHVTV 2618
VTY E G Y++ +K+ ++H+PGSP+ V +
Sbjct: 272 VTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%)
Frame = +2
Query: 1227 DTSGIKAFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAQITNPSGASTECFVKDNA 1286
+ S +K G G+ + +F VD+R + G + I PS A EC DN
Sbjct: 98 NASKVKVSGDGL--TEGMANEVNEFVVDTR---EAGYGGMSLSIEGPSKADIECH--DNE 256
Query: 1287 DGTYQVEYTPFEKGFHVVEVTYDDVPIPNSPFKVAVTEGCQPS 1329
DGT +V Y P E G +++ + + D +P SP+ V + G +PS
Sbjct: 257 DGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI--GGEPS 379
Score = 40.8 bits (94), Expect(2) = 8e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%)
Frame = +2
Query: 644 NPDLVQAYGPGLEKSGCTINNPAEFIVDPKDAGSAPLKILAQDGEGQPIDIQMKSRMDGT 703
N V+ G GL + N EF+VD ++AG + L+ +G + DI+ DGT
Sbjct: 98 NASKVKVSGDGLTEG--MANEVNEFVVDTREAGYGGMS-LSIEGPSKA-DIECHDNEDGT 265
Query: 704 YACSYTPLKAIKHTIAVVWGGVNIPHSPYRVNIG 737
+Y P + + I + + ++P SPY V IG
Sbjct: 266 CRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIG 367
Score = 22.3 bits (46), Expect(2) = 8e-04, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 610 PKEPGEYAVHIMCDDEDIKDSPY 632
P+E GE+ V++ + + I +SP+
Sbjct: 1 PRETGEHLVNVYRNGKHIANSPF 69
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%)
Frame = +2
Query: 844 DASKVKAEGPGLSKAGVENGKPTHFTVHTKGAGKAPLNVQFSSPLPGEAVKDLDIIDNYD 903
+ASKVK G GL++ G+ N + F V T+ AG +++ P + D++ DN D
Sbjct: 98 NASKVKVSGDGLTE-GMAN-EVNEFVVDTREAGYGGMSLSIEGP----SKADIECHDNED 259
Query: 904 YSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFTVGV 938
+ V Y PT+ G + + + +P SP++V +
Sbjct: 260 GTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 40.8 bits (94), Expect(2) = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%)
Frame = +2
Query: 2334 GKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGIHTIDVKFNGSHVVGSPFKVRVG 2393
G + + PS A ECH + E V + P E G + I++KF HV GSP+ V++G
Sbjct: 194 GGMSLSIEGPSKADIECH--DNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIG 367
Query: 2394 EPGQAGNPALVSAYGAGLETGTTGIQSEFFINTTQAGPGTLSVT 2437
++ + A + G Q E + PGT +T
Sbjct: 368 GEPSTKITERITRHKAAADVTHVGSQCELSLKI----PGTSPLT 487
Score = 21.6 bits (44), Expect(2) = 0.001, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 2272 QEPGNYEVSIKFNDEHIPDSPYLV 2295
+E G + V++ N +HI +SP+ +
Sbjct: 4 RETGEHLVNVYRNGKHIANSPFKI 75
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 1780 KATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQFYV 1825
KA E DN+DGT V Y PTE G + ++IK+ H+PG+P +
Sbjct: 227 KADIECHDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +2
Query: 267 TGNMVKQPAKFTVDTISAGQGDVMVFVEDPEGNKEEARVTPDSDKNKTYSVEYLPKVTGL 326
T M + +F VDT AG G + + +E P +A + +++ T V Y P G
Sbjct: 134 TEGMANEVNEFVVDTREAGYGGMSLSIEGPS----KADIECHDNEDGTCRVTYKPTEPGT 301
Query: 327 HKVIVLFAGQHISKSPFEVNV 347
+ + + FA QH+ SP+ V +
Sbjct: 302 YIINIKFADQHVPGSPYSVKI 364
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
Frame = +2
Query: 935 TVGVAAPLDLSKIKING------LENRVEVGKDQEFAIDTNGAGGQGKLDVTILSPSRKV 988
+VG + + SK+K++G + N V EF +DT AG G + ++I PS+
Sbjct: 74 SVGESELGNASKVKVSGDGLTEGMANEV-----NEFVVDTREAG-YGGMSLSIEGPSKAD 235
Query: 989 VPCLVAPVAGRECSTAK--FIPREEGLFAVDVTYDGHPVPGSPYTVEASLPPDPT---KV 1043
+ C E T + + P E G + +++ + VPGSPY+V+ P ++
Sbjct: 236 IEC-----HDNEDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKIGGEPSTKITERI 400
Query: 1044 KAHGPGLEGGLVGKPAEFTI 1063
H + VG E ++
Sbjct: 401 TRHKAAADVTHVGSQCELSL 460
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 2172 VRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVG 2203
V + P E G + +++K+ QHV GSP+ +G
Sbjct: 272 VTYKPTEPGTYIINIKFADQHVPGSPYSVKIG 367
>21436
Length = 546
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 105/152 (69%)
Frame = -1
Query: 701 DGTYACSYTPLKAIKHTIAVVWGGVNIPHSPYRVNIGQGSHPQKVKVFGPGVERSGLKAN 760
DGTYAC Y PL+ +KHT++V +GGV +P+SP+RV++ + S P KVK+ GPGV +G+K
Sbjct: 540 DGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVT-NGIKTM 364
Query: 761 EPTHFTVDCTEAGEGDVSVGIKCDARVLSDDEEDVDFDIIHNANDTFTVKYVPPAPGRYT 820
PT+FTVDC +AG GDV+VG+ D R + DV N + TFTV+Y P PG YT
Sbjct: 363 SPTYFTVDCKQAGPGDVAVGL-TDGRGM-----DVPVKTTGNQDGTFTVEYEPKLPGTYT 202
Query: 821 IKVLFASQEIPASPFRVKVDPSHDASKVKAEG 852
+ V FA E+P+SP +VKV+P+ D S ++ +G
Sbjct: 201 VMVYFADVEVPSSPVKVKVEPNIDVSSIRVDG 106
Score = 124 bits (310), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 94/167 (56%)
Frame = -1
Query: 1378 NKDGSCSAEYIPFAPGDYDVNITYGGVHIPGSPFRVPSKDVVDPSKVKIAGPGLSSCVRA 1437
N+DG+ + Y+P P + V++ +GGV +P SPFRV + DPSKVKI+GPG+++ ++
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1438 CIPQSFTVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYIVSVKY 1497
P FTVD +AG + V + RG+ PV N DGT TV Y P G Y V V +
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1498 ADEEIPRSPFKVKVLPTYDASKVTASGPGLSAYGVPASLPVEFAIDA 1544
AD E+P SP KVKV P D S + G + P EF +DA
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIRVDGLDSRVF---IEAPSEFVVDA 55
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Frame = -1
Query: 1090 NGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSKVVASGPGLEHG-KV 1148
N DGT + Y+P +P ++ V++ F V +P SPF+ + P DPSKV SGPG+ +G K
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1149 GEPGILCVDCSEAGPGTLGLEAVSDSGAKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKY 1208
P VDC +AGPG + + G V N+DGT+ V Y P G YT+ + +
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1209 GGELVPHFPAWVKVEPAIDTSGIKAFGPGIEGKD--VFREATTDFTVDSRPLTQVGGDHI 1266
VP P VKVEP ID S I+ ++G D VF EA ++F VD+ L G +
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIR-----VDGLDSRVFIEAPSEFVVDASVLDPKGQGEV 22
Query: 1267 KAQITNP 1273
+A +T P
Sbjct: 21 EAILTTP 1
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 78/143 (54%)
Frame = -1
Query: 414 YRCVYKPVQPGPHVVKVSFAGDAIPKSPFGVQIGEACNPNACRASGRGLQPKGVRIRETA 473
Y C Y P++P H V V+F G A+P SPF V + E +P+ + SG G+ G++
Sbjct: 531 YACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVT-NGIKTMSPT 355
Query: 474 DFKVDTKAAGSGELGVTVKGPKGLEELVKQKGFLDGVYSFEYYPSTPGKYSVAVTWGGHH 533
F VD K AG G++ V + +G++ VK G DG ++ EY P PG Y+V V +
Sbjct: 354 YFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFADVE 175
Query: 534 IPKSPFEVQVGPEAGMQKVRAWG 556
+P SP +V+V P + +R G
Sbjct: 174 VPSSPVKVKVEPNIDVSSIRVDG 106
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Frame = -1
Query: 802 NANDTFTVKYVPPAPGRYTIKVLFASQEIPASPFRVKVDPSHDASKVKAEGPGLSKAGVE 861
N + T+ +Y+P P ++T+ V F +P SPFRV V D SKVK GPG++ G++
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTN-GIK 370
Query: 862 NGKPTHFTVHTKGAGKAPLNVQFSSPLPGEAVK-DLDIIDNYDYSHTVKYTPTQQGNMQV 920
PT+FTV K AG + V + G + + N D + TV+Y P G V
Sbjct: 369 TMSPTYFTVDCKQAGPGDVAVGLTD---GRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTV 199
Query: 921 LVTYGGDPIPKSPFTVGVAAPLDLSKIKINGLENRVEVGKDQEFAIDTN--GAGGQGKLD 978
+V + +P SP V V +D+S I+++GL++RV + EF +D + GQG+++
Sbjct: 198 MVYFADVEVPSSPVKVKVEPNIDVSSIRVDGLDSRVFIEAPSEFVVDASVLDPKGQGEVE 19
Query: 979 VTILSP 984
+ +P
Sbjct: 18 AILTTP 1
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 72/134 (53%)
Frame = -1
Query: 1571 NKDGTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRIRATQTGDASKCLATGPGIAPTVKT 1630
N+DGTYA Y+P + ++ + V +GG +P SP+R+ + D SK +GPG+ +KT
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1631 GEEVGFVVDAKTAGKGKVTCVILTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRF 1690
F VD K AG G V + G + N+DGT+ + Y PGTY + V F
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1691 GGVDIPNSPFTVMV 1704
V++P+SP V V
Sbjct: 186 ADVEVPSSPVKVKV 145
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 88/183 (48%), Gaps = 3/183 (1%)
Frame = -1
Query: 1285 NADGTYQVEYTPFEKGFHVVEVTYDDVPIPNSPFKVAVTEGCQPSRVHAQGPGLKEAFTN 1344
N DGTY Y P H V V + V +PNSPF+V V E PS+V GPG+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1345 KS-NVFTVVTRGAGIG--GLGITVEGPSESKINCRDNKDGSCSAEYIPFAPGDYDVNITY 1401
S FTV + AG G +G+T + + N+DG+ + EY P PG Y V + +
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1402 GGVHIPGSPFRVPSKDVVDPSKVKIAGPGLSSCVRACIPQSFTVDSSKAGLAPLEVRVLG 1461
V +P SP +V + +D S +++ GL S V P F VD+S VL
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIRVD--GLDSRVFIEAPSEFVVDAS----------VLD 43
Query: 1462 PRG 1464
P+G
Sbjct: 42 PKG 34
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Frame = -1
Query: 1474 NGDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPTYDASKVTASGPGLSAYGVP 1533
N DGT+ Y P + + VSV + +P SPF+V V D SKV SGPG++ G+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTN-GIK 370
Query: 1534 ASLPVEFAIDARDAGEGLLAVQITDQEGKPQRATVHDNKDGTYAVTYIPDKTGRYMIGVT 1593
P F +D + AG G +AV +TD G N+DGT+ V Y P G Y + V
Sbjct: 369 TMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVY 190
Query: 1594 YGGDNIPLSPYRIRATQTGDASKCLATGPGIAPTVKTGEEVGFVVDAKT---AGKGKVTC 1650
+ +P SP +++ D S G ++ E FVVDA G+G+V
Sbjct: 189 FADVEVPSSPVKVKVEPNIDVSSIRVDGLDSRVFIEAPSE--FVVDASVLDPKGQGEVEA 16
Query: 1651 VILTP 1655
++ TP
Sbjct: 15 ILTTP 1
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 75/151 (49%)
Frame = -1
Query: 1185 NKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPAWVKVEPAIDTSGIKAFGPGIEGKDVF 1244
N+DGTYA Y+PL +T+++ +GG VP+ P V V D S +K GPG+ +
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVT-NGIK 370
Query: 1245 REATTDFTVDSRPLTQVGGDHIKAQITNPSGASTECFVKDNADGTYQVEYTPFEKGFHVV 1304
+ T FTVD + Q G + +T+ G N DGT+ VEY P G + V
Sbjct: 369 TMSPTYFTVDCK---QAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTV 199
Query: 1305 EVTYDDVPIPNSPFKVAVTEGCQPSRVHAQG 1335
V + DV +P+SP KV V S + G
Sbjct: 198 MVYFADVEVPSSPVKVKVEPNIDVSSIRVDG 106
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Frame = -1
Query: 1788 NKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQFYVNYPNSGS-VSAYGPGLVYGVAN 1846
N+DGT RY P H + + + G +P +P + +V P+ S V GPG+ G+
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 1847 KTAT-FTIVTEDAGEGGLDLAIEGPSKAEI--SCIDNKDGTCTVTYLPTLPGDYSILVKY 1903
+ T FT+ + AG G + + + ++ N+DGT TV Y P LPG Y+++V +
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 1904 NDKHIPGSPFTAKITGRLCCFFSDDNRRCSQVKLGSAADFLLDISETD 1951
D +P SP K+ + + S+V + + ++F++D S D
Sbjct: 186 ADVEVPSSPVKVKVEPNIDVSSIRVDGLDSRVFIEAPSEFVVDASVLD 43
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Frame = -1
Query: 310 DKNKTYSVEYLPKVTGLHKVIVLFAGQHISKSPFEVNVDKAQGDASKVTAKGPGLETTGN 369
+++ TY+ Y+P H V V F G + SPF V+V + D SKV GPG+ T G
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPS-DPSKVKISGPGV-TNGI 373
Query: 370 IANKPTYFDIYTAGAGVGDIGIEVEDPQGKNSVELLVEDRGNQ--VYRCVYKPVQPGPHV 427
PTYF + AG GD+ + + D +G +++ V+ GNQ + Y+P PG +
Sbjct: 372 KTMSPTYFTVDCKQAGPGDVAVGLTDGRG---MDVPVKTTGNQDGTFTVEYEPKLPGTYT 202
Query: 428 VKVSFAGDAIPKSPFGVQIGEACNPNACRASGRGLQPKGVRIRETADFKVDTKA---AGS 484
V V FA +P SP V++ + ++ R G + V I ++F VD G
Sbjct: 201 VMVYFADVEVPSSPVKVKVEPNIDVSSIRVDGLDSR---VFIEAPSEFVVDASVLDPKGQ 31
Query: 485 GELGVTVKGP 494
GE+ + P
Sbjct: 30 GEVEAILTTP 1
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Frame = -1
Query: 508 DGVYSFEYYPSTPGKYSVAVTWGGHHIPKSPFEVQVGPEAGMQKVRAWGPGLHGGIVGRS 567
DG Y+ Y P P K++V+V +GG +P SPF V V + KV+ GPG+ GI S
Sbjct: 540 DGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKTMS 361
Query: 568 AD-FVVESIGSEVGTLGFAIEGPS--QAKIEYDDQNDGSCDVKYWPKEPGEYAVHIMCDD 624
F V+ + G + + ++ DG+ V+Y PK PG Y V + D
Sbjct: 360 PTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFAD 181
Query: 625 EDIKDSPYMAFIHPATGDYNPDLVQAYGPGLEKSGCTINNPAEFIVD 671
++ SP + P N D+ GL+ S I P+EF+VD
Sbjct: 180 VEVPSSPVKVKVEP-----NIDVSSIRVDGLD-SRVFIEAPSEFVVD 58
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Frame = -1
Query: 1005 KFIPREEGLFAVDVTYDGHPVPGSPYTVEASLPPDPTKVKAHGPGLEGGL-VGKPAEFTI 1063
+++P V V + G VP SP+ V + P DP+KVK GPG+ G+ P FT+
Sbjct: 522 RYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKTMSPTYFTV 343
Query: 1064 DTKXXXXXXXXXXVEG--PCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGS 1121
D K + + ++ + N DGT +V Y P PG Y V + F +V +P S
Sbjct: 342 DCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFADVEVPSS 163
Query: 1122 PFKADIEMPFDPSKVVASG 1140
P K +E D S + G
Sbjct: 162 PVKVKVEPNIDVSSIRVDG 106
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Frame = -1
Query: 1983 FIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDARRAKVYGQGLSEG-RTFEMSDFI 2041
++P +H VS+ G V NSP + V +E D + K+ G G++ G +T + F
Sbjct: 519 YMPLRPVKHTVSVNFGGVAVPNSPFRVHV--AEPSDPSKVKISGPGVTNGIKTMSPTYFT 346
Query: 2042 VDTRDAGYGGISLAVEGPSKVDI--QTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPG 2099
VD + AG G +++ + +D+ +T +DGT V Y P +PG Y V FAD VP
Sbjct: 345 VDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFADVEVPS 166
Query: 2100 SPFTVKI 2106
SP VK+
Sbjct: 165 SPVKVKV 145
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Frame = -1
Query: 599 QNDGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPATGDYNPDLVQAYGPGLEKS 658
DG+ +Y P P ++ V + + +SP+ + + +P V+ GPG+ +
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPS---DPSKVKISGPGV-TN 379
Query: 659 GCTINNPAEFIVDPKDAGSAPLKILAQDGEGQPIDIQMKSRMDGTYACSYTPLKAIKHTI 718
G +P F VD K AG + + DG G + ++ DGT+ Y P +T+
Sbjct: 378 GIKTMSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTV 199
Query: 719 AVVWGGVNIPHSPYRVNIGQGSHPQKVKVFGPGVERSGLKANEPTHFTVDCT---EAGEG 775
V + V +P SP +V + ++V G S + P+ F VD + G+G
Sbjct: 198 MVYFADVEVPSSPVKVKVEPNIDVSSIRVDG---LDSRVFIEAPSEFVVDASVLDPKGQG 28
Query: 776 DV 777
+V
Sbjct: 27 EV 22
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Frame = -1
Query: 2169 SHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGAHKVRAGGPGLERGEAGI- 2227
++ R++P HTVSV + G V SPF+ V + KV+ GPG+ G +
Sbjct: 534 TYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSD--PSKVKISGPGVTNGIKTMS 361
Query: 2228 PAEFSIWTREAGAGGLSIAVEGPSKAEITFDD--HKNGSCGVSYIAQEPGNYEVSIKFND 2285
P F++ ++AG G +++ + ++ +++G+ V Y + PG Y V + F D
Sbjct: 360 PTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYFAD 181
Query: 2286 EHIPDSPYLVPVIAPSDDARCLTVLSLQESGLKVNQPASFAIRLNGAKGKIDAKVHSPSG 2345
+P SP V V P+ D + V L +S + + P+ F +DA V P G
Sbjct: 180 VEVPSSPVKVKV-EPNIDVSSIRVDGL-DSRVFIEAPSEFV---------VDASVLDPKG 34
Query: 2346 AVE 2348
E
Sbjct: 33 QGE 25
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Frame = -1
Query: 2360 YAVRFIPHENGIHTIDVKFNGSHVVGSPFKVRVGEPGQAGNPALVSAYGAGLETGTTGIQ 2419
YA R++P HT+ V F G V SPF+V V EP +P+ V G G+ G +
Sbjct: 531 YACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEP---SDPSKVKISGPGVTNGIKTMS 361
Query: 2420 SEFF-INTTQAGPGTLSVTIEGPSKVKMDCQEIPEG-----YKVMYTPMAPGNYLIGVKY 2473
+F ++ QAGPG ++V + MD G + V Y P PG Y + V Y
Sbjct: 360 PTYFTVDCKQAGPGDVAVGLT--DGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMV-Y 190
Query: 2474 GGPNHISRSPFKAKV 2488
+ SP K KV
Sbjct: 189 FADVEVPSSPVKVKV 145
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = -1
Query: 273 QPAKFTVDTISAGQGDVMVFVEDPEGNKEEARVTPDSDKNKTYSVEYLPKVTGLHKVIVL 332
P FTVD AG GDV V + D G + T +++ T++VEY PK+ G + V+V
Sbjct: 363 SPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTT--GNQDGTFTVEYEPKLPGTYTVMVY 190
Query: 333 FAGQHISKSPFEVNVD 348
FA + SP +V V+
Sbjct: 189 FADVEVPSSPVKVKVE 142
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 69/163 (42%)
Frame = -1
Query: 1667 NEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMVSRVPSPEPALTSRSTSTCWKLG 1726
N DGTY Y +P + + V FGGV +PNSPF V V+ EP+ S+ + +
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVA-----EPSDPSKVKISGPGVT 382
Query: 1727 EGRAQAVGSWVTEEAYVPVSDMNGLGFKPFDLVIPFAVRKGEITGTVHMPSGKKATPEIV 1786
G ++ T D G P D+ + +G M K T
Sbjct: 381 NGIKTMSPTYFT-------VDCKQAG--PGDVAVGLTDGRG-------MDVPVKTT---- 262
Query: 1787 DNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQFYVNYPN 1829
N+DGT TV Y P G + + + + +P +P++ V PN
Sbjct: 261 GNQDGTFTVEYEPKLPGTYTVMVYFADVEVPSSPVKVKVE-PN 136
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Frame = -1
Query: 2260 HKNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSPYLVPVIAPSDDARCLTVLSLQESGLKV 2319
+++G+ Y+ P + VS+ F +P+SP+ V V PSD ++ +G+K
Sbjct: 546 NRDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPGVTNGIKT 367
Query: 2320 NQPASFAIRLNGA-KGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGIHTIDVKF 2378
P F + A G + + G + + + V + P G +T+ V F
Sbjct: 366 MSPTYFTVDCKQAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKLPGTYTVMVYF 187
Query: 2379 NGSHVVGSPFKVRV 2392
V SP KV+V
Sbjct: 186 ADVEVPSSPVKVKV 145
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 53/146 (36%), Gaps = 11/146 (7%)
Frame = -1
Query: 2070 EDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPF-----------TVKISGEGRVRESITR 2118
DGT Y P P + VS F VP SPF VKISG G V I
Sbjct: 543 RDGTYACRYMPLRPVKHTVSVNFGGVAVPNSPFRVHVAEPSDPSKVKISGPG-VTNGIKT 367
Query: 2119 TSRAPAVATVGSICDLNLKIPEINSSDMSAHVTSPSGHVTEAEIVPMGKNSHCVRFVPQE 2178
S P TV C + D++ +T G + + V + P+
Sbjct: 366 MS--PTYFTVD--CK------QAGPGDVAVGLTDGRGMDVPVKTTGNQDGTFTVEYEPKL 217
Query: 2179 MGVHTVSVKYRGQHVTGSPFQFTVGP 2204
G +TV V + V SP + V P
Sbjct: 216 PGTYTVMVYFADVEVPSSPVKVKVEP 139
>27230
Length = 583
Score = 73.6 bits (179), Expect(2) = 4e-21, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%)
Frame = -1
Query: 1262 GGDHIKAQITNPSGASTECFVKDNADGTYQVEYTPFEKGFHVVEVTYDDVPIPNSPFKVA 1321
G ++A +T PSG + V + DGTY V YTP E+G ++VTY +PIP SPF+V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1322 VTEGCQPSRVHAQGPGLKEAFT 1343
G +RV A GPGL+ T
Sbjct: 67 AVAGYDANRVRAYGPGLEGGLT 2
Score = 48.9 bits (115), Expect(2) = 4e-21, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = -2
Query: 1177 KAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPAWVKVEPA---IDTSGIKA 1233
K++++ N DGT VTY+P G Y + + +G + VP P + P+ D S I A
Sbjct: 513 KSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITA 334
Query: 1234 FGPGIEGKDVFREATTDFTVDSRPL 1258
G GI + VF EA ++F VD+ L
Sbjct: 333 SGYGISPEGVFIEAPSEFVVDASVL 259
Score = 55.8 bits (133), Expect(2) = 2e-17, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -1
Query: 1471 VVDN-GDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPTYDASKVTASGPGL 1527
+VDN DGT+ V YTP +EGP + V Y IP SPF+V + YDA++V A GPGL
Sbjct: 190 LVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYGPGL 17
Score = 53.9 bits (128), Expect(2) = 2e-17, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = -2
Query: 1368 PSESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGVHIPGSPFR---VPSKDVVDPSKV 1424
P +SKINC + DG+ + YIP PG+Y V +++G +PGSPF PS+ D S +
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSI 340
Query: 1425 KIAGPGLS-SCVRACIPQSFTVDSS 1448
+G G+S V P F VD+S
Sbjct: 339 TASGYGISPEGVFIEAPSEFVVDAS 265
Score = 57.4 bits (137), Expect(2) = 3e-17, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = -2
Query: 1469 VNVVDNGDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPTY---DASKVTASGP 1525
+N V+ DGT VTY P G Y V V + D+ +P SPF + P+ D S +TASG
Sbjct: 504 INCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGY 325
Query: 1526 GLSAYGVPASLPVEFAIDAR 1545
G+S GV P EF +DA
Sbjct: 324 GISPEGVFIEAPSEFVVDAS 265
Score = 51.6 bits (122), Expect(2) = 3e-17, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = -1
Query: 1548 GEGLLAVQITDQEGKPQRATVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRIR 1607
G+G + +T G+ + V + KDGTY V Y P + G + VTY G IP SP+++
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 1608 ATQTGDASKCLATGPGI 1624
A DA++ A GPG+
Sbjct: 67 AVAGYDANRVRAYGPGL 17
Score = 57.0 bits (136), Expect(2) = 2e-16, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = -2
Query: 589 PSQAKIEYDDQNDGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPATGDYNPDLV 648
P ++KI + +DG+ +V Y P+ PGEY V + D+ + SP+ A I P+ D + +
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSI 340
Query: 649 QAYGPGLEKSGCTINNPAEFIVD 671
A G G+ G I P+EF+VD
Sbjct: 339 TASGYGISPEGVFIEAPSEFVVD 271
Score = 49.3 bits (116), Expect(2) = 2e-16, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = -1
Query: 689 GQPIDIQMKSRMDGTYACSYTPLKAIKHTIAVVWGGVNIPHSPYRVNIGQGSHPQKVKVF 748
G+ + + + DGTY YTP++ ++ V + G+ IP SP++VN G +V+ +
Sbjct: 208 GRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAY 29
Query: 749 GPGVE 753
GPG+E
Sbjct: 28 GPGLE 14
Score = 51.6 bits (122), Expect(2) = 4e-15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = -1
Query: 1174 SGAKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPAWVKVEPAIDTSGIKA 1233
SG K + + N KDGTY V Y P+ G +L + Y G +P P V D + ++A
Sbjct: 211 SGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRA 32
Query: 1234 FGPGIEG 1240
+GPG+EG
Sbjct: 31 YGPGLEG 11
Score = 50.1 bits (118), Expect(2) = 4e-15, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = -2
Query: 1080 PCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADI---EMPFDPSKV 1136
P ++KI C + DGT +V+Y+P PGEY V + + +PGSPF A I E+ D S +
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSI 340
Query: 1137 VASGPGL--EHGKVGEPGILCVDCSEAGP 1163
ASG G+ E + P VD S P
Sbjct: 339 TASGYGISPEGVFIEAPSEFVVDASVLDP 253
Score = 49.7 bits (117), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%)
Frame = -1
Query: 2139 PEINSSDMSAHVTSPSGHVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPF 2198
P ++ A +T+PSG + + M ++ V + P E G ++ V Y+G + GSPF
Sbjct: 256 PLKGQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPF 77
Query: 2199 QFTVGPLGEGGAHKVRAGGPGLERG 2223
Q V + A++VRA GPGLE G
Sbjct: 76 Q--VNAVAGYDANRVRAYGPGLEGG 8
Score = 43.1 bits (100), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = -2
Query: 2059 PSKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKIS 2107
P K I + +DGT V+Y P PG Y V D+ VPGSPFT I+
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT 373
Score = 48.1 bits (113), Expect(2) = 1e-11, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -2
Query: 791 DEEDVDFDIIHNANDTFTVKYVPPAPGRYTIKVLFASQEIPASPFRVKVDPSH---DASK 847
D E + ++ + T V Y+P PG Y +KV + +P SPF + PS D S
Sbjct: 522 DPEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSS 343
Query: 848 VKAEGPGLSKAGVENGKPTHFTV 870
+ A G G+S GV P+ F V
Sbjct: 342 ITASGYGISPEGVFIEAPSEFVV 274
Score = 41.6 bits (96), Expect(2) = 1e-11, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = -1
Query: 898 IIDNY-DYSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFTVGVAAPLDLSKIKING 951
++DN D ++ V YTP ++G + VTY G PIP SPF V A D ++++ G
Sbjct: 190 LVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYG 26
Score = 50.1 bits (118), Expect(2) = 2e-11, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%)
Frame = -1
Query: 483 GSGELGVTVKGPKGLEELVKQKGFLDGVYSFEYYPSTPGKYSVAVTWGGHHIPKSPFEVQ 542
G GE+ + P G + DG Y Y P G S+ VT+ G IP SPF+V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 543 VGPEAGMQKVRAWGPGLHGGI 563
+VRA+GPGL GG+
Sbjct: 67 AVAGYDANRVRAYGPGLEGGL 5
Score = 38.9 bits (89), Expect(2) = 2e-11, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = -2
Query: 395 DPQGKNSVELLVEDRGNQVYRCVYKPVQPGPHVVKVSFAGDAIPKSPFGVQIGEA-CNPN 453
DP+ K+ + + D G Y P PG + VKVS +P SPF I + +P+
Sbjct: 522 DPE-KSKINCVNXDDGT--VNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPD 352
Query: 454 --ACRASGRGLQPKGVRIRETADFKVD 478
+ ASG G+ P+GV I ++F VD
Sbjct: 351 VSSITASGYGISPEGVFIEAPSEFVVD 271
Score = 49.3 bits (116), Expect(2) = 4e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -1
Query: 2332 AKGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGIHTIDVKFNGSHVVGSPFKVR 2391
+G+++A + +PSG + V ++ Y V + P E G ++DV + G + GSPF+V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 2392 VGEPGQAGNPA-LVSAYGAGLETGTT 2416
AG A V AYG GLE G T
Sbjct: 67 A----VAGYDANRVRAYGPGLEGGLT 2
Score = 38.9 bits (89), Expect(2) = 4e-11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = -2
Query: 2250 PSKAEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSPYLVPVIAPSD---DARC 2306
P K++I + +G+ V+YI + PG Y+V + D+ +P SP+ +I PS+ D
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTA-LITPSELDPDVSS 343
Query: 2307 LTV--LSLQESGLKVNQPASFAI 2327
+T + G+ + P+ F +
Sbjct: 342 ITASGYGISPEGVFIEAPSEFVV 274
Score = 45.4 bits (106), Expect(2) = 7e-11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = -1
Query: 1644 GKGKVTCVILTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTV 1702
G+G+V ++ TP G + + V +DGTY + YT + G + V + G+ IP SPF V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQV 71
Score = 42.0 bits (97), Expect(2) = 7e-11, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = -2
Query: 1563 PQRATVH--DNKDGTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRIRATQTG---DASKC 1617
P+++ ++ + DGT VTYIP+ G Y + V++G +P SP+ T + D S
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSI 340
Query: 1618 LATGPGIAPT-VKTGEEVGFVVDA 1640
A+G GI+P V FVVDA
Sbjct: 339 TASGYGISPEGVFIEAPSEFVVDA 268
Score = 46.2 bits (108), Expect(2) = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -1
Query: 1368 PSESKINCR-DN-KDGSCSAEYIPFAPGDYDVNITYGGVHIPGSPFRVPSKDVVDPSKVK 1425
PS K+ DN KDG+ Y P G +++TY G+ IPGSPF+V + D ++V+
Sbjct: 214 PSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVR 35
Query: 1426 IAGPGL 1431
GPGL
Sbjct: 34 AYGPGL 17
Score = 40.4 bits (93), Expect(2) = 1e-10, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%)
Frame = -2
Query: 1270 ITNPSGASTECFVKDNADGTYQVEYTPFEKGFHVVEVTYDDVPIPNSPFKVAVTEGCQPS 1329
+ +P + C D DGT V Y P G + V+V++ D P+P SPF +T PS
Sbjct: 528 LMDPEKSKINCVNXD--DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT----PS 367
Query: 1330 RVHAQGPGLKEAFTNKSNVFTVVTRGAGIGGLGITVEGPSE 1370
+ +V ++ G GI G+ +E PSE
Sbjct: 366 ELDP-------------DVSSITASGYGISPEGVFIEAPSE 283
Score = 45.4 bits (106), Expect(2) = 3e-10, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = -1
Query: 1092 DGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSKVVASGPGLEHG 1146
DGT V Y P + G +++ ++ + IPGSPF+ + +D ++V A GPGLE G
Sbjct: 172 DGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYGPGLEGG 8
Score = 39.7 bits (91), Expect(2) = 3e-10, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = -2
Query: 1006 FIPREEGLFAVDVTYDGHPVPGSPYT---VEASLPPDPTKVKAHGPGL--EGGLVGKPAE 1060
+IP G + V V++ PVPGSP+T + L PD + + A G G+ EG + P+E
Sbjct: 462 YIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGVFIEAPSE 283
Query: 1061 FTID 1064
F +D
Sbjct: 282 FVVD 271
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = -1
Query: 973 GQGKLDVTILSPSRKVVPCLVAPVAGRECSTAKFIPREEGLFAVDVTYDGHPVPGSPYTV 1032
GQG+++ + +PS + + LV + + P EEG ++DVTY G P+PGSP+ V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMK-DGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQV 71
Query: 1033 EASLPPDPTKVKAHGPGLEGGL 1054
A D +V+A+GPGLEGGL
Sbjct: 70 NAVAGYDANRVRAYGPGLEGGL 5
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = -2
Query: 1870 PSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKIT 1918
P K++I+C++ DGT VTY+P PG+Y + V + DK +PGSPFTA IT
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT 373
Score = 45.1 bits (105), Expect(2) = 6e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = -1
Query: 385 GVGDIGIEVEDPQGKNSVELLVEDRGNQVYRCVYKPVQPGPHVVKVSFAGDAIPKSPFGV 444
G G++ + P G+ ++ LV++ + Y +Y P++ GP + V++ G IP SPF V
Sbjct: 247 GQGEVEAILTTPSGRK-LQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQV 71
Query: 445 QIGEACNPNACRASGRGLQ 463
+ N RA G GL+
Sbjct: 70 NAVAGYDANRVRAYGPGLE 14
Score = 32.3 bits (72), Expect(2) = 6e-08, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -2
Query: 299 NKEEARVTPDSDKNKTYSVEYLPKVTGLHKVIVLFAGQHISKSPFEVNVDKAQ--GDASK 356
+ E++++ + + T +V Y+P+ G +KV V + + SPF + ++ D S
Sbjct: 522 DPEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSS 343
Query: 357 VTAKGPGLETTGNIANKPTYF 377
+TA G G+ G P+ F
Sbjct: 342 ITASGYGISPEGVFIEAPSEF 280
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -1
Query: 1766 KGEITGTVHMPSGKKATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQF-Y 1824
+GE+ + PSG+K + + KDGT V Y P E G + + Y+G IPG+P Q
Sbjct: 244 QGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNA 65
Query: 1825 VNYPNSGSVSAYGPGLVYGV 1844
V ++ V AYGPGL G+
Sbjct: 64 VAGYDANRVRAYGPGLEGGL 5
Score = 35.8 bits (81), Expect(2) = 5e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 589 PSQAKIE--YDDQNDGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPATGDYNPD 646
PS K++ D+ DG+ V Y P E G ++ + I SP+ A Y+ +
Sbjct: 214 PSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN---AVAGYDAN 44
Query: 647 LVQAYGPGLE 656
V+AYGPGLE
Sbjct: 43 RVRAYGPGLE 14
Score = 35.0 bits (79), Expect(2) = 5e-06, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -2
Query: 508 DGVYSFEYYPSTPGKYSVAVTWGGHHIPKSPFEVQVGP---EAGMQKVRAWGPGL--HGG 562
DG + Y P PG+Y V V+ G +P SPF + P + + + A G G+ G
Sbjct: 483 DGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGV 304
Query: 563 IVGRSADFVVES 574
+ ++FVV++
Sbjct: 303 FIEAPSEFVVDA 268
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 44/81 (54%)
Frame = -1
Query: 285 GQGDVMVFVEDPEGNKEEARVTPDSDKNKTYSVEYLPKVTGLHKVIVLFAGQHISKSPFE 344
GQG+V + P G K + V D+ K+ TY V Y P G + V + G I SPF+
Sbjct: 247 GQGEVEAILTTPSGRKLQTLV--DNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQ 74
Query: 345 VNVDKAQGDASKVTAKGPGLE 365
VN A DA++V A GPGLE
Sbjct: 73 VNA-VAGYDANRVRAYGPGLE 14
Score = 42.4 bits (98), Expect(2) = 5e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = -1
Query: 799 IIHNAND-TFTVKYVPPAPGRYTIKVLFASQEIPASPFRVKVDPSHDASKVKAEGPGL 855
++ N D T+ V Y P G ++ V + IP SPF+V +DA++V+A GPGL
Sbjct: 190 LVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVNAVAGYDANRVRAYGPGL 17
Score = 24.6 bits (52), Expect(2) = 5e-05, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Frame = -2
Query: 694 IQMKSRMDGTYACSYTPLKAIKHTIAVVWGGVNIPHSPYRVNIGQGSHPQKVKVF---GP 750
I + DGT +Y P ++ + V G +P SP+ I V G
Sbjct: 504 INCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGY 325
Query: 751 GVERSGLKANEPTHFTVDCT 770
G+ G+ P+ F VD +
Sbjct: 324 GISPEGVFIEAPSEFVVDAS 265
Score = 35.4 bits (80), Expect(2) = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -1
Query: 1859 GEGGLDLAIEGPSKAEI-SCIDN-KDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPF 1913
G+G ++ + PS ++ + +DN KDGT V Y P G S+ V Y IPGSPF
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPF 77
Score = 29.3 bits (64), Expect(2) = 3e-04, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = -2
Query: 1779 KKATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQFYVN----YPNSGSVS 1834
+K+ V+ DGTV V Y P G +++ + + +PG+P + P+ S++
Sbjct: 516 EKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSIT 337
Query: 1835 AYGPGL 1840
A G G+
Sbjct: 336 ASGYGI 319
Score = 30.8 bits (68), Expect(2) = 0.004, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = -2
Query: 1979 IGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIG-DARRAKVYGQGLS-EGRTFE 2036
+ +++IP GE+ V + V SP + ++ SE+ D G G+S EG E
Sbjct: 474 VNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALITPSELDPDVSSITASGYGISPEGVFIE 295
Query: 2037 M-SDFIVD 2043
S+F+VD
Sbjct: 294 APSEFVVD 271
Score = 30.0 bits (66), Expect(2) = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 2048 GYGGISLAVEGPSKVDIQT--EDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVK 2105
G G + + PS +QT ++++DGT V Y P G + + +PGSPF V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = -2
Query: 1653 LTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMVS 1705
L D +++ + + +DGT ++ Y PG Y + V G +P SPFT +++
Sbjct: 531 LLMDPEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGDKPVPGSPFTALIT 373
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 43/118 (36%), Gaps = 3/118 (2%)
Frame = -2
Query: 2441 PSKVKMDCQEIPEG-YKVMYTPMAPGNYLIGVKYGGPNHISRSPFKAKVTGQRLVSPGSA 2499
P K K++C +G V Y P PG Y + V +G + SPF A +T L
Sbjct: 519 PEKSKINCVNXDDGTVNVTYIPEFPGEYKVKVSHGD-KPVPGSPFTALITPSEL------ 361
Query: 2500 NETSSILVESVTRSSTETCYSAIPKSSSDASKVTSKGAGLSK--AFVGQKSSFLVDCS 2555
D S +T+ G G+S F+ S F+VD S
Sbjct: 360 --------------------------DPDVSSITASGYGISPEGVFIEAPSEFVVDAS 265
Score = 31.2 bits (69), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 2587 NVTYVVKERGDYVLAVKWGEEHIPGSPF 2614
NVTY+ + G+Y + V G++ +PGSPF
Sbjct: 471 NVTYIPEFPGEYKVKVSHGDKPVPGSPF 388
>19002
Length = 842
Score = 94.7 bits (234), Expect = 4e-19, Method: Composition-based stats.
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Frame = -2
Query: 46 DGLRLIALLEVLSQKRMHHKYHQRPTFRQMKLENVSVALEFLDHESIKLVSIDSKAIVDG 105
DG L+ LLEV + R + R LENV AL FL + + L ++ + IVDG
Sbjct: 841 DGKMLMKLLEV--RVRGEIASDXKGKMRIHCLENVDKALTFLHEQRVHLENMGAHDIVDG 668
Query: 106 NLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKI---PYLPITNFN 162
+ +L LGL+WT+IL + I + E+ D+++ ++ K LL W Q K P + + NF
Sbjct: 667 SSRLTLGLIWTIILRFQIQDIMIEEV--DNSETKSAKDALLLWCQMKTAGYPNVNVRNFT 494
Query: 163 QNWQDGKALGALVDSCAPGLCPDWESWDPRKPVDNAREAMQQADDWLGVPQVITPEEIIH 222
+W+DG A A++ P L ++ + N + A A+D LG+ ++ PE++
Sbjct: 493 TSWRDGLAFNAIIHKHRPDLV-QYDRLHKSSAIQNLQNAFTVAEDKLGLTALLEPEDVNV 317
Query: 223 PDVDEHSVMTYLSQF 237
DE S++TY+ +
Sbjct: 316 EYPDEKSIITYVVTY 272
>05081
Length = 981
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = -1
Query: 2522 IPKSSSDASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGPT-TPCEEVSMKH 2580
I + DASKV +KG GL KAF + +F VD AG +L +G+ P+ P E+S+K
Sbjct: 975 IRRFRGDASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKK 796
Query: 2581 VGKQQYNVTYVVKERGDYVLAVKWGEEHIPGSPF 2614
Y + Y V E GD+VL VKWG++ IPGSPF
Sbjct: 795 TTNTSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%)
Frame = -1
Query: 347 VDKAQGDASKVTAKGPGLETTGNIANKPTYFDIYTAGAGVGDIGIEVEDPQGKNSVELLV 406
+ + +GDASKV AKG GL+ N+ F + AG + + + P GK EL V
Sbjct: 975 IRRFRGDASKVVAKGQGLKKA--FTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSV 802
Query: 407 EDRGNQVYRCVYKPVQPGPHVVKVSFAGDAIPKSPF 442
+ N Y YK + G HV+ V + D IP SPF
Sbjct: 801 KKTTNTSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = -1
Query: 1612 GDASKCLATGPGIAPTVKTGEEVGFVVDAKTAGKGKVTCVILTPDGT-EAEADVIENEDG 1670
GDASK +A G G+ T F VD K AG+ + ++ P G EAE V + +
Sbjct: 960 GDASKVVAKGQGLKKAF-TNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNT 784
Query: 1671 TYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTV 1702
+Y I Y + G +V++V++G DIP SPF +
Sbjct: 783 SYTINYKVTEIGDHVLHVKWGDDDIPGSPFVL 688
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -1
Query: 1829 NSGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPS---KAEISCIDNKDGTC 1885
++ V A G GL N+ TF + +DAGE L + + PS +AE+S + +
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 1886 TVTYLPTLPGDYSILVKYNDKHIPGSPF 1913
T+ Y T GD+ + VK+ D IPGSPF
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = -1
Query: 1516 DASKVTASGPGLSAYGVPASLPVEFAIDARDAGEGLLAVQITDQEGKPQ-RATVHDNKDG 1574
DASKV A G GL + F +D +DAGE LL V + GKP+ +V +
Sbjct: 957 DASKVVAKGQGLKK--AFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNT 784
Query: 1575 TYAVTYIPDKTGRYMIGVTYGGDNIPLSPY 1604
+Y + Y + G +++ V +G D+IP SP+
Sbjct: 783 SYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = -1
Query: 1329 SRVHAQGPGLKEAFTNKSNVFTVVTRGAGIGGLGITVEGPS---ESKINCRDNKDGSCSA 1385
S+V A+G GLK+AFTN+ F V + AG L + + PS E++++ + + S +
Sbjct: 951 SKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTI 772
Query: 1386 EYIPFAPGDYDVNITYGGVHIPGSPF 1411
Y GD+ +++ +G IPGSPF
Sbjct: 771 NYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = -1
Query: 1420 DPSKVKIAGPGLSSCVRACIPQSFTVDSSKAGLAPLEVRVLGPRGLVEP-VNVVDNGDGT 1478
D SKV G GL + Q+F VD AG A L+V ++ P G E ++V + +
Sbjct: 957 DASKVVAKGQGLKKAFTNRL-QTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTS 781
Query: 1479 HTVTYTPSQEGPYIVSVKYADEEIPRSPF 1507
+T+ Y ++ G +++ VK+ D++IP SPF
Sbjct: 780 YTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = -1
Query: 2017 GDARRAKVYGQGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPS---KVDIQTEDLEDGT 2073
GDA + GQGL + T + F VD +DAG + + + PS + ++ + + +
Sbjct: 960 GDASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTS 781
Query: 2074 CKVSYFPTVPGVYIVSTKFADEHVPGSPFTV 2104
++Y T G +++ K+ D+ +PGSPF +
Sbjct: 780 YTINYKVTEIGDHVLHVKWGDDDIPGSPFVL 688
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = -1
Query: 648 VQAYGPGLEKSGCTINNPAEFIVDPKDAGSAPLKILAQDGEGQP-IDIQMKSRMDGTYAC 706
V A G GL+K+ N F VD KDAG A L++ G+P ++ +K + +Y
Sbjct: 945 VVAKGQGLKKAFT--NRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTI 772
Query: 707 SYTPLKAIKHTIAVVWGGVNIPHSPY 732
+Y + H + V WG +IP SP+
Sbjct: 771 NYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Frame = -1
Query: 1227 DTSGIKAFGPGIEGKDVFREATTDFTVDSR----PLTQVGGDHIKAQITNPSGA-STECF 1281
D S + A G G+ K F F VD + L QVG + PSG E
Sbjct: 957 DASKVVAKGQGL--KKAFTNRLQTFQVDVKDAGEALLQVG-------MIAPSGKPEAELS 805
Query: 1282 VKDNADGTYQVEYTPFEKGFHVVEVTYDDVPIPNSPF 1318
VK + +Y + Y E G HV+ V + D IP SPF
Sbjct: 804 VKKTTNTSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = -1
Query: 1039 DPTKVKAHGPGLEGGLVGKPAEFTIDTKXXXXXXXXXXVEGPC---EAKIECSDNGDGTC 1095
D +KV A G GL+ + F +D K + P EA++ + +
Sbjct: 957 DASKVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSY 778
Query: 1096 SVSYLPTKPGEYFVNILFEEVHIPGSPF 1123
+++Y T+ G++ +++ + + IPGSPF
Sbjct: 777 TINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 37.4 bits (85), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -1
Query: 457 ASGRGLQPKGVRIRETADFKVDTKAAGSGELGVTVKGPKGL-EELVKQKGFLDGVYSFEY 515
A G+GL+ +T F+VD K AG L V + P G E + K + Y+ Y
Sbjct: 939 AKGQGLKKAFTNRLQT--FQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTINY 766
Query: 516 YPSTPGKYSVAVTWGGHHIPKSPF 539
+ G + + V WG IP SPF
Sbjct: 765 KVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = -1
Query: 744 KVKVFGPGVERSGLKANEPTHFTVDCTEAGEGDVSVGIKCDARVLSDDEEDVDFDIIHNA 803
KV G G++++ N F VD +AGE + VG+ + + + + +
Sbjct: 948 KVVAKGQGLKKAF--TNRLQTFQVDVKDAGEALLQVGM-----IAPSGKPEAELSVKKTT 790
Query: 804 NDTFTVKYVPPAPGRYTIKVLFASQEIPASPF 835
N ++T+ Y G + + V + +IP SPF
Sbjct: 789 NTSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 1776 PSGK-KATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPL 1821
PSGK +A + + + T+ Y TE+G H +H+K+ IPG+P
Sbjct: 834 PSGKPEAELSVKKTTNTSYTINYKVTEIGDHVLHVKWGDDDIPGSPF 694
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = -1
Query: 551 KVRAWGPGLHGGIVGRSADFVVESIGSEVGTLGFAIEGPS---QAKIEYDDQNDGSCDVK 607
KV A G GL R F V+ + L + PS +A++ + S +
Sbjct: 948 KVVAKGQGLKKAFTNRLQTFQVDVKDAGEALLQVGMIAPSGKPEAELSVKKTTNTSYTIN 769
Query: 608 YWPKEPGEYAVHIMCDDEDIKDSPYM 633
Y E G++ +H+ D+DI SP++
Sbjct: 768 YKVTEIGDHVLHVKWGDDDIPGSPFV 691
>19147
Length = 474
Score = 65.1 bits (157), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Frame = +1
Query: 86 FLDHESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRL 145
++ + +KLVSI ++ IVDGN+K+ LG++WT+IL ++I D ++ T K+ L
Sbjct: 49 YIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQ--------DITVEELTAKEGL 204
Query: 146 LGWIQNKI-PY--LPITNFNQNWQDGKALGALVDSCAPGL 182
L W Q K PY + + NF+ +++DG A AL+ P L
Sbjct: 205 LLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPEL 324
>19154
Length = 512
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Frame = +2
Query: 1250 DFTVDSRPLTQVGGDHIKAQITNPSGASTECFVKDNADGTYQVEYTPFEKGFHVVEVTYD 1309
DF+V++ ++ G +I +PSG S V + + Y + Y P E G H + +TY+
Sbjct: 74 DFSVET---SRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYN 244
Query: 1310 DVPIPNSPFKVAVTEGCQPSRVHAQGPGLKEAFTNKSNVFTVVTRGAGIGGLGITVEGP- 1368
+ +P SPF ++EG P A G GL +K+ +F + RG G + V+GP
Sbjct: 245 SLELPGSPFTQEISEGVLPP---AYGEGLHRGEEDKAAIFYIDARGL-TGEPSVQVDGPN 412
Query: 1369 SESKINCRDNKDGSCSAEYIPFAPG 1393
S +K + DG S YIP G
Sbjct: 413 SIAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Frame = +2
Query: 1443 FTVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYIVSVKYADEEI 1502
F+V++S++G VR++ P G PV+V + + +TY PS+ G + + + Y E+
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLEL 256
Query: 1503 PRSPFKVK----VLPTYDASKVTASGPGLSAYGVPASLPVEFAIDARDAGEGLLAVQITD 1558
P SPF + VLP A G GL G + F IDAR G +VQ+ D
Sbjct: 257 PGSPFTQEISEGVLP-------PAYGEGLHR-GEEDKAAI-FYIDARGL-TGEPSVQV-D 403
Query: 1559 QEGKPQRATVHDNKDGTYAVTYIPDKTG 1586
+ ++ DG Y+VTYIP + G
Sbjct: 404 GPNSIAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Frame = +2
Query: 474 DFKVDTKAAGSGELGVTVKGPKGLEELVKQKGFLDGVYSFEYYPSTPGKYSVAVTWGGHH 533
DF V+T +G E V + P G V Y+ Y PS G++ + +T+
Sbjct: 74 DFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLE 253
Query: 534 IPKSPFEVQVGPEAGMQKVRAWGPGLHGGIVGRSADFVVESIGSEVGTLGFAIEGP-SQA 592
+P SPF ++ E + A+G GLH G ++A F +++ G G ++GP S A
Sbjct: 254 LPGSPFTQEIS-EGVLPP--AYGEGLHRGEEDKAAIFYIDARGL-TGEPSVQVDGPNSIA 421
Query: 593 KIEYDDQNDGSCDVKYWPKEPG 614
K + Q DG V Y P E G
Sbjct: 422 KCSIEAQPDGQYSVTYIPVEVG 487
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Frame = +2
Query: 963 EFAIDTNGAGGQGKLDVTILSPSRKVVPCLVAPVAGRECST----AKFIPREEGLFAVDV 1018
+F+++T+ +G + + V I+SPS + VP V E ST + P E G + +
Sbjct: 74 DFSVETSRSG-KCEQTVRIVSPSGQSVPVDVT-----ETSTYGYNITYQPSESGQHRIFL 235
Query: 1019 TYDGHPVPGSPYTVEAS---LPPDPTKVKAHGPGLEGGLVGKPAEFTIDTKXXXXXXXXX 1075
TY+ +PGSP+T E S LPP A+G GL G K A F ID +
Sbjct: 236 TYNSLELPGSPFTQEISEGVLPP------AYGEGLHRGEEDKAAIFYIDAR-GLTGEPSV 394
Query: 1076 XVEGPCE-AKIECSDNGDGTCSVSYLPTKPG 1105
V+GP AK DG SV+Y+P + G
Sbjct: 395 QVDGPNSIAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
Frame = +2
Query: 1937 LGSAADFLLDISETDLSTLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIK 1996
L + DF ++ S + T I +PSG+ P + I++ P E G+H + +
Sbjct: 59 LANWLDFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLT 238
Query: 1997 KNGNHVANSPVSIMVVQSEIGDARRAKVYGQGLSEGRTFEMSDFIVDTRDAGYGGISLAV 2056
N + SP + EI + YG+GL G + + F +D R G S+ V
Sbjct: 239 YNSLELPGSPFT-----QEISEGVLPPAYGEGLHRGEEDKAAIFYIDARGLT-GEPSVQV 400
Query: 2057 EGPSKV-DIQTEDLEDGTCKVSYFP 2080
+GP+ + E DG V+Y P
Sbjct: 401 DGPNSIAKCSIEAQPDGQYSVTYIP 475
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +2
Query: 1096 SVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSKVVASGPGLEHGKVGEPGILC 1155
+++Y P++ G++ + + + + +PGSPF +I P A G GL G+ + I
Sbjct: 188 NITYQPSESGQHRIFLTYNSLELPGSPFTQEISEGVLPP---AYGEGLHRGEEDKAAIFY 358
Query: 1156 VDCSEAGPGTLGLEAVSDSG--AKAEVSIQNNKDGTYAVTYVPLTAG 1200
+D G G +V G + A+ SI+ DG Y+VTY+P+ G
Sbjct: 359 IDAR----GLTGEPSVQVDGPNSIAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Frame = +2
Query: 1765 RKGEITGTVHM--PSGKKATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPGNPLQ 1822
R G+ TV + PSG+ ++ + + Y P+E G H + + Y +PG+P
Sbjct: 95 RSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLELPGSP-- 268
Query: 1823 FYVNYPNSGSV-SAYGPGLVYGVANKTATFTIVTEDAG--EGGLDLAIEGP-SKAEISCI 1878
+ + G + AYG GL G +K A F I DA G + ++GP S A+ S
Sbjct: 269 -FTQEISEGVLPPAYGEGLHRGEEDKAAIFYI---DARGLTGEPSVQVDGPNSIAKCSIE 436
Query: 1879 DNKDGTCTVTYLP 1891
DG +VTY+P
Sbjct: 437 AQPDGQYSVTYIP 475
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%)
Frame = +2
Query: 868 FTVHTKGAGKAPLNVQFSSPLPGEAVKDLDIIDNYDYSHTVKYTPTQQGNMQVLVTYGGD 927
F+V T +GK V+ SP G++V +D+ + Y + + Y P++ G ++ +TY
Sbjct: 77 FSVETSRSGKCEQTVRIVSP-SGQSVP-VDVTETSTYGYNITYQPSESGQHRIFLTYNSL 250
Query: 928 PIPKSPFTVGVAAPLDLSKIKINGLENRVEVGKDQEFAIDTNGAGGQGKLDV 979
+P SPFT ++ + L GL +R E K F ID G G+ + V
Sbjct: 251 ELPGSPFTQEISEGV-LPPAYGEGL-HRGEEDKAAIFYIDARGLTGEPSVQV 400
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%)
Frame = +2
Query: 377 FDIYTAGAGVGDIGIEVEDPQGKNSVELLVEDRGNQVYRCVYKPVQPGPHVVKVSFAGDA 436
F + T+ +G + + + P G+ SV + V + Y Y+P + G H + +++
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQ-SVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLE 253
Query: 437 IPKSPFGVQIGEACNPNACRASGRGLQPKGVRIRETADFKVDTKAAGSGELGVTVKGPKG 496
+P SPF +I E P A G GL +G + A F +D + +GE V V GP
Sbjct: 254 LPGSPFTQEISEGVLPP---AYGEGLH-RGEEDK-AAIFYIDARGL-TGEPSVQVDGPNS 415
Query: 497 LEELVKQKGFLDGVYSFEYYP 517
+ + + DG YS Y P
Sbjct: 416 IAK-CSIEAQPDGQYSVTYIP 475
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%)
Frame = +2
Query: 765 FTVDCTEAGEGDVSVGIKCDARVLSDDEEDVDFDIIHNANDTFTVKYVPPAPGRYTIKVL 824
F+V+ + +G+ + +V R++S + V D+ + + + Y P G++ I +
Sbjct: 77 FSVETSRSGKCEQTV------RIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLT 238
Query: 825 FASQEIPASPFRVKVDPSHDASKVKAEGPGLSKAGVENGKPTHFTVHTKGAGKAPLNVQF 884
+ S E+P SPF ++ + A G GL + E K F + +G P +VQ
Sbjct: 239 YNSLELPGSPFTQEIS---EGVLPPAYGEGLHRG--EEDKAAIFYIDARGLTGEP-SVQV 400
Query: 885 SSPLPGEAVKDLDIIDNYDYSHTVKYTPTQQGNM 918
P ++ I D ++V Y P + G++
Sbjct: 401 DGP---NSIAKCSIEAQPDGQYSVTYIPVEVGSV 493
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Frame = +2
Query: 1851 FTIVTEDAGEGGLDLAIEGPSKAEISCIDNKDGTC--TVTYLPTLPGDYSILVKYNDKHI 1908
F++ T +G+ + I PS + + T +TY P+ G + I + YN +
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLEL 256
Query: 1909 PGSPFTAKIT-GRLCCFFSDDNRRCSQVKLGSAADFLLDISETDLSTLTASIKAPSGRDE 1967
PGSPFT +I+ G L + + R + K AA F +D + + + P+ +
Sbjct: 257 PGSPFTQEISEGVLPPAYGEGLHRGEEDK---AAIFYID-ARGLTGEPSVQVDGPNSIAK 424
Query: 1968 PCLLKRLPNNHIGISFIPREVG 1989
C ++ P+ +++IP EVG
Sbjct: 425 -CSIEAQPDGQYSVTYIPVEVG 487
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +2
Query: 662 INNPAEFIVDPKDAGSA--PLKILAQDGEGQPIDIQMKSRMDGTYACSYTPLKAIKHTIA 719
+ N +F V+ +G ++I++ G+ P+D+ S Y +Y P ++ +H I
Sbjct: 59 LANWLDFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYG--YNITYQPSESGQHRIF 232
Query: 720 VVWGGVNIPHSPYRVNIGQGSHPQKVKVFGPGVER 754
+ + + +P SP+ I +G P +G G+ R
Sbjct: 233 LTYNSLELPGSPFTQEISEGVLP---PAYGEGLHR 328
Score = 35.0 bits (79), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = +2
Query: 1538 VEFAIDARDAGEGLLAVQITDQEGKPQRATVHDNKDGTYAVTYIPDKTGRYMIGVTYGGD 1597
++F+++ +G+ V+I G+ V + Y +TY P ++G++ I +TY
Sbjct: 71 LDFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSL 250
Query: 1598 NIPLSPY 1604
+P SP+
Sbjct: 251 ELPGSPF 271
Score = 33.9 bits (76), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 1/156 (0%)
Frame = +2
Query: 270 MVKQPAKFTVDTISAGQGDVMVFVEDPEGNKEEARVTPDSDKNKTYSVEYLPKVTGLHKV 329
M+ F+V+T +G+ + V + P G VT S Y++ Y P +G H++
Sbjct: 56 MLANWLDFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYG--YNITYQPSESGQHRI 229
Query: 330 IVLFAGQHISKSPFEVNVDKAQGDASKVTAKGPGLETTGNIANKPTYFDIYTAGAGVGDI 389
+ + + SPF + + A G GL Y D A G+
Sbjct: 230 FLTYNSLELPGSPFTQEIS----EGVLPPAYGEGLHRGEEDKAAIFYID---ARGLTGEP 388
Query: 390 GIEVEDPQGKNSV-ELLVEDRGNQVYRCVYKPVQPG 424
++V+ P NS+ + +E + + Y Y PV+ G
Sbjct: 389 SVQVDGP---NSIAKCSIEAQPDGQYSVTYIPVEVG 487
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 2550 FLVDCSKAGSNMLLIGVHGPTTPCEEVSMKHVGKQQYNVTYVVKERGDYVLAVKWGEEHI 2609
F V+ S++G + + P+ V + YN+TY E G + + + + +
Sbjct: 77 FSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLEL 256
Query: 2610 PGSPF 2614
PGSPF
Sbjct: 257 PGSPF 271
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +2
Query: 1387 YIPFAPGDYDVNITYGGVHIPGSPF-RVPSKDVVDPSKVKIAGPGLSSCV--RACIPQSF 1443
Y P G + + +TY + +PGSPF + S+ V+ P+ G GL +A I F
Sbjct: 197 YQPSESGQHRIFLTYNSLELPGSPFTQEISEGVLPPAY----GEGLHRGEEDKAAI---F 355
Query: 1444 TVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEG 1489
+D+ P V+V GP + + ++ DG ++VTY P + G
Sbjct: 356 YIDARGLTGEP-SVQVDGPNSIAK-CSIEAQPDGQYSVTYIPVEVG 487
Score = 30.4 bits (67), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 2039 DFIVDTRDAGYGGISLAVEGPSKVDIQTEDLEDGTC--KVSYFPTVPGVYIVSTKFADEH 2096
DF V+T +G ++ + PS + + E T ++Y P+ G + + +
Sbjct: 74 DFSVETSRSGKCEQTVRIVSPSGQSVPVDVTETSTYGYNITYQPSESGQHRIFLTYNSLE 253
Query: 2097 VPGSPFTVKIS 2107
+PGSPFT +IS
Sbjct: 254 LPGSPFTQEIS 286
>29755
Length = 460
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = +3
Query: 2574 EEVSMKHVGKQQYNVTYVVKERGDYVLAVKWGEEHIPGSPFHVTV 2618
+E+++K+VG QYN+ Y VK++G Y+L V+WG+E+IPGSPF V V
Sbjct: 3 DELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 1475 GDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPTYDASKV 1520
G G + + YT Q+G Y++ V++ DE IP SPF V V+ + A+ +
Sbjct: 27 GSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI*DFPAAHL 164
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 1670 GTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTV-MVSRVPSPEPALTSRSTS 1720
G Y+I YT + G+Y++ VR+G +IP SPF V ++ P+ LT+ S +
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI*DFPAAHLDLTNSSVA 188
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +3
Query: 906 HTVKYTPTQQGNMQVLVTYGGDPIPKSPFTVGV-----AAPLDLSK 946
+ + YT QQG+ ++V +G + IP SPF V V AA LDL+
Sbjct: 39 YNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI*DFPAAHLDLTN 176
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 2254 EITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPDSPYLVPVI 2298
E+T +G ++Y ++ G+Y + +++ DE+IP SP+ V VI
Sbjct: 6 ELTVKYVGSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI 140
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 1883 GTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI 1917
G + Y G Y ++V++ D++IPGSPF +
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 509 GVYSFEYYPSTPGKYSVAVTWGGHHIPKSPFEVQV 543
G Y+ Y G Y + V WG +IP SPF V V
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 2072 GTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKI 2106
G ++Y G Y++ ++ DE++PGSPF V +
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 1574 GTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRI 1606
G Y + Y + G YM+ V +G +NIP SP+ +
Sbjct: 33 GQYNINYTVKQQGSYMLIVRWGDENIPGSPFAV 131
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 1091 GDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADI 1127
G G +++Y + G Y + + + + +IPGSPF D+
Sbjct: 27 GSGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDV 137
>09100
Length = 930
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Frame = +1
Query: 10 EDAPWKKIQQ--NTFTRWCNEHLKCVNKRIG-----NLQTDLSDGLRLIALLEVLSQKRM 62
E W + QQ + + W N LK K+ G +L+ D+ DG+ ++ ++S++++
Sbjct: 433 ESRTWIEPQQQLSAYMAWINSQLK---KKPGAHLIEDLRHDMRDGVVFADVIHIVSKQQI 603
Query: 63 HHKYHQRPTFRQMKLENVSVALEFLDHESIKLVSIDSKAIVDGNLKLILGLVWTLILHY 121
+ T +M+ +NV L F+ IK+ I S+ IV+GNLK ++ L+ L HY
Sbjct: 604 PGIQNVPTTLDEMR-QNVDRVLHFMTQNRIKMHRISSRDIVEGNLKAVMRLILALAAHY 777
>17613
Length = 1108
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +2
Query: 90 ESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWI 149
+ +KLVSI ++ IVDGN+K+ LG++WT+IL ++I D ++ T K+ LL W
Sbjct: 59 KGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQ--------DITVEELTAKEGLLLWC 214
Query: 150 QNK 152
Q K
Sbjct: 215 QRK 223
>35059
Length = 669
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 5/178 (2%)
Frame = +2
Query: 2027 QGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPS-KVDIQTEDLEDGTCKVSYFPTVPGV 2085
+G R ++F+VD R AG G + + ++G + + ++ + +Y P PG
Sbjct: 104 KGAEIARATVQAEFVVDGRRAGPGEVRVELKGVRISLPVHITPIKYDRYRCTYTPAFPGG 283
Query: 2086 YIVSTKFADEHVPGSPFTVKISGEGRVRESITRTSRAPAVATVGS----ICDLNLKIPEI 2141
+++ +++ VPG P V ++ +G V + T GS D
Sbjct: 284 FLLYVYWSNILVPGCPHKVTVTSKGDV-SXVKVTGEGLKGGIAGSELRVFVDNKRGWSRG 460
Query: 2142 NSSDMSAHVTSPSGHVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQ 2199
+SDM T + + P+ H V P H + V+Y GQHV GSP +
Sbjct: 461 GNSDMFDTPTRGTSGREAERLSPL----HAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Frame = +2
Query: 1290 YQVEYTPFEKGFHVVEVTYDDVPIPNSPFKVAVTEGCQPSRVHAQGPGLKEAFT-NKSNV 1348
Y+ YTP G ++ V + ++ +P P KV VT S V G GLK ++ V
Sbjct: 248 YRCTYTPAFPGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRV 427
Query: 1349 FTVVTRGAGIGGLGITVEGPSESKINCRDNKDGSCSAEY-IPFAPGDYDVNITYGGVHIP 1407
F RG GG + P+ + A Y P + + + + Y G H+P
Sbjct: 428 FVDNKRGWSRGGNSDMFDTPTRGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVP 607
Query: 1408 GSPFR 1412
GSP R
Sbjct: 608 GSPLR 622
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 463 QPKGVRI-RET--ADFKVDTKAAGSGELGVTVKGPKGLEELVKQKGFLDGVYSFEYYPST 519
Q KG I R T A+F VD + AG GE+ V +KG + + V Y Y P+
Sbjct: 98 QVKGAEIARATVQAEFVVDGRRAGPGEVRVELKGVR-ISLPVHITPIKYDRYRCTYTPAF 274
Query: 520 PGKYSVAVTWGGHHIPKSPFEVQVGPEAGMQKVRAWGPGLHGGIVGRSADFVVES 574
PG + + V W +P P +V V + + V+ G GL GGI G V++
Sbjct: 275 PGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDN 439
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 78/208 (37%), Gaps = 2/208 (0%)
Frame = +2
Query: 1128 EMPFDPSKVVASGPGLEHGKVGEPGILCVDCSEAGPGTLGLEAVSDSGAKAEVSIQNNKD 1187
P+ P++ G E + VD AGPG + +E + V I K
Sbjct: 65 RFPWTPARSC*QVKGAEIARATVQAEFVVDGRRAGPGEVRVE-LKGVRISLPVHITPIKY 241
Query: 1188 GTYAVTYVPLTAGMYTLTMKYGGELVPHFPAWVKVEPAIDTSGIKAFGPGIEGKDVFREA 1247
Y TY P G + L + + LVP P V V D S +K G G++G E
Sbjct: 242 DRYRCTYTPAFPGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSEL 421
Query: 1248 TTDFTVDSRPLTQVGG-DHIKAQITNPSGASTECFVKDNADGTYQVEYTPFEKGFHVVEV 1306
F + R ++ G D SG E +A V P H+++V
Sbjct: 422 RV-FVDNKRGWSRGGNSDMFDTPTRGTSGREAERLSPLHA-----VYPCPTSADKHLLQV 583
Query: 1307 TYDDVPIPNSPFKVAVTEGCQ-PSRVHA 1333
YD +P SP + +E Q P+R
Sbjct: 584 RYDGQHVPGSPLRP*ESESLQMPARCRC 667
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 81/215 (37%), Gaps = 9/215 (4%)
Frame = +2
Query: 2410 GLETGTTGIQSEFFINTTQAGPGTLSVTIEGPSKVKMDCQEIP---EGYKVMYTPMAPGN 2466
G E +Q+EF ++ +AGPG + V ++G ++ + P + Y+ YTP PG
Sbjct: 107 GAEIARATVQAEFVVDGRRAGPGEVRVELKG-VRISLPVHITPIKYDRYRCTYTPAFPGG 283
Query: 2467 YLIGVKYGGPNHISRSPFKAKVTGQRLVSPGSANETSSILVESVTRSSTETCYSAIPKSS 2526
+L+ V + S+ILV T T S
Sbjct: 284 FLLYVYW-----------------------------SNILVPGCPHKVTVT-------SK 355
Query: 2527 SDASKVTSKGAGLSKAFVGQKSSFLVD----CSKAGSNMLLIGVHGPTTPCEEVSMKHVG 2582
D S V G GL G + VD S+ G++ + TP S +
Sbjct: 356 GDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWSRGGNSDMF------DTPTRGTSGREAE 517
Query: 2583 KQQ-YNVTYVVKERGD-YVLAVKWGEEHIPGSPFH 2615
+ + Y D ++L V++ +H+PGSP
Sbjct: 518 RLSPLHAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%)
Frame = +2
Query: 666 AEFIVDPKDAGSAPLKILAQDGEGQPIDIQMKSRMDGTYACSYTPLKAIKHTIAVVWGGV 725
AEF+VD + AG +++ + G + + + Y C+YTP + V W +
Sbjct: 137 AEFVVDGRRAGPGEVRVELK-GVRISLPVHITPIKYDRYRCTYTPAFPGGFLLYVYWSNI 313
Query: 726 NIPHSPYRVNIGQGSHPQKVKVFGPGVERSGLKANEPTHFTVDCTEAGEGDVSVGIKCDA 785
+P P++V + VKV G G+ + G+ +E F + G S
Sbjct: 314 LVPGCPHKVTVTSKGDVSXVKVTGEGL-KGGIAGSELRVFVDNKRGWSRGGNSDMFDTPT 490
Query: 786 RVLSDDEEDVDFDIIHNANDTFTVKYVPPAPGRYTIKVLFASQEIPASPFR 836
R S E + + V P + ++ ++V + Q +P SP R
Sbjct: 491 RGTSGREAE-------RLSPLHAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Frame = +2
Query: 384 AGVGDIGIEVEDPQGKNSVEL--LVEDRGNQVYRCVYKPVQPGPHVVKVSFAGDAIPKSP 441
AG G++ +E++ + V + + DR YRC Y P PG ++ V ++ +P P
Sbjct: 164 AGPGEVRVELKGVRISLPVHITPIKYDR----YRCTYTPAFPGGFLLYVYWSNILVPGCP 331
Query: 442 FGVQIGEACNPNACRASGRGLQP--KGVRIRETADFKVDTKAAGSGELGVT-VKGPKGLE 498
V + + + + +G GL+ G +R D K G+ ++ T +G G E
Sbjct: 332 HKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWSRGGNSDMFDTPTRGTSGRE 511
Query: 499 ELVKQKGFLDGVYSFEYYPSTPGKYSVAVTWGGHHIPKSPFE 540
++ L VY P++ K+ + V + G H+P SP
Sbjct: 512 --AERLSPLHAVYPC---PTSADKHLLQVRYDGQHVPGSPLR 622
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 4/175 (2%)
Frame = +2
Query: 2219 GLERGEAGIPAEFSIWTREAGAGGLSIAVEGPSKA---EITFDDHKNGSCGVSYIAQEPG 2275
G E A + AEF + R AG G + + ++G + IT + C +Y PG
Sbjct: 107 GAEIARATVQAEFVVDGRRAGPGEVRVELKGVRISLPVHITPIKYDRYRC--TYTPAFPG 280
Query: 2276 NYEVSIKFNDEHIPDSPYLVPVIAPSDDARCLTVLSLQESGLKVNQPASFAIRLNG-AKG 2334
+ + + +++ +P P+ V V + D + + G+ ++ F G ++G
Sbjct: 281 GFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWSRG 460
Query: 2335 KIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGIHTIDVKFNGSHVVGSPFK 2389
+P+ L P +AV P H + V+++G HV GSP +
Sbjct: 461 GNSDMFDTPTRGTSGREAERLSP-LHAVYPCPTSADKHLLQVRYDGQHVPGSPLR 622
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 7/175 (4%)
Frame = +2
Query: 963 EFAIDTNGAG-GQGKLDVTILSPSRKVVPCLVAPVAGRECSTAKFIPREEGLFAVDVTYD 1021
EF +D AG G+ +++ L R +P + P+ + + P G F + V +
Sbjct: 140 EFVVDGRRAGPGEVRVE---LKGVRISLPVHITPIK-YDRYRCTYTPAFPGGFLLYVYWS 307
Query: 1022 GHPVPGSPYTVEASLPPDPTKVKAHGPGLEGGLVGKPAEFTIDTKXXXXXXXXXXV-EGP 1080
VPG P+ V + D + VK G GL+GG+ G +D K + + P
Sbjct: 308 NILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDNKRGWSRGGNSDMFDTP 487
Query: 1081 CEAKI-ECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFK----ADIEMP 1130
++ +V PT ++ + + ++ H+PGSP + ++MP
Sbjct: 488 TRGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVPGSPLRP*ESESLQMP 652
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +2
Query: 1098 SYLPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSKVVASGPGLEHGKVGEPGILCVD 1157
+Y P PG + + + + + +PG P K + D S V +G GL+ G G + VD
Sbjct: 257 TYTPAFPGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVD 436
Query: 1158 CSEAGPGTLGLEAVSDSGAKAEVSIQNNK-DGTYAVTYVPLTAGMYTLTMKYGGELVPHF 1216
++ G G + D+ + + + +AV P +A + L ++Y G+ VP
Sbjct: 437 -NKRGWSRGGNSDMFDTPTRGTSGREAERLSPLHAVYPCPTSADKHLLQVRYDGQHVPGS 613
Query: 1217 P 1217
P
Sbjct: 614 P 616
Score = 37.7 bits (86), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 1/188 (0%)
Frame = +2
Query: 1636 FVVDAKTAGKGKVTCVILTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDI 1695
FVVD + AG G+V V L + + Y YT A PG +++YV + + +
Sbjct: 143 FVVDGRRAGPGEVR-VELKGVRISLPVHITPIKYDRYRCTYTPAFPGGFLLYVYWSNILV 319
Query: 1696 PNSPFTVMVSRVPSPEPALTSRSTSTCWKL-GEGRAQAVGSWVTEEAYVPVSDMNGLGFK 1754
P P V V TS+ + K+ GEG + E V V + G
Sbjct: 320 PGCPHKVTV----------TSKGDVSXVKVTGEGLKGGIAG---SELRVFVDNKRGWS-- 454
Query: 1755 PFDLVIPFAVRKGEITGTVHMPSGKKATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYRGS 1814
+G + P+ + E + V PT H + ++Y G
Sbjct: 455 -----------RGGNSDMFDTPTRGTSGRE-AERLSPLHAVYPCPTSADKHLLQVRYDGQ 598
Query: 1815 HIPGNPLQ 1822
H+PG+PL+
Sbjct: 599 HVPGSPLR 622
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 71/196 (36%), Gaps = 15/196 (7%)
Frame = +2
Query: 1328 PSRVHAQGPGLKEAFTNKSNVFTVVTRGAGIGGLGITVEGPSES-KINCRDNKDGSCSAE 1386
P+R Q G + A F V R AG G + + ++G S ++ K
Sbjct: 80 PARSC*QVKGAEIARATVQAEFVVDGRRAGPGEVRVELKGVRISLPVHITPIKYDRYRCT 259
Query: 1387 YIPFAPGDYDVNITYGGVHIPGSPFRVPSKDVVDPSKVKIAGPGLSSCVRACIPQSFT-- 1444
Y P PG + + + + + +PG P +V D S VK+ G GL + + F
Sbjct: 260 YTPAFPGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAGSELRVFVDN 439
Query: 1445 ------------VDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYI 1492
D+ G + E L P H V P+ ++
Sbjct: 440 KRGWSRGGNSDMFDTPTRGTSGREAERLSP---------------LHAVYPCPTSADKHL 574
Query: 1493 VSVKYADEEIPRSPFK 1508
+ V+Y + +P SP +
Sbjct: 575 LQVRYDGQHVPGSPLR 622
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 2535 KGAGLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGP--TTPCEEVSMKHVGKQQYNVTYVV 2592
KGA +++A V ++ F+VD +AG + + + G + P +K+ +Y TY
Sbjct: 104 KGAEIARATV--QAEFVVDGRRAGPGEVRVELKGVRISLPVHITPIKY---DRYRCTYTP 268
Query: 2593 KERGDYVLAVKWGEEHIPGSPFHVTV 2618
G ++L V W +PG P VTV
Sbjct: 269 AFPGGFLLYVYWSNILVPGCPHKVTV 346
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 51/147 (34%), Gaps = 18/147 (12%)
Frame = +2
Query: 901 NYDYSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFTVGVAAPLDLSKIK---------ING 951
YD + YTP G + V + +P P V V + D+S +K I G
Sbjct: 236 KYD-RYRCTYTPAFPGGFLLYVYWSNILVPGCPHKVTVTSKGDVSXVKVTGEGLKGGIAG 412
Query: 952 LENRVEV---------GKDQEFAIDTNGAGGQGKLDVTILSPSRKVVPCLVAPVAGRECS 1002
E RV V G F T G G+ + LSP V PC
Sbjct: 413 SELRVFVDNKRGWSRGGNSDMFDTPTRGTSGR---EAERLSPLHAVYPC----------- 550
Query: 1003 TAKFIPREEGLFAVDVTYDGHPVPGSP 1029
P + V YDG VPGSP
Sbjct: 551 -----PTSADKHLLQVRYDGQHVPGSP 616
>09711
Length = 3041
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Frame = +1
Query: 18 QQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEV----LSQKRMHHKYHQRPTFR 73
++ T+ W N V+ + +L +DL DGL + L + L K + R
Sbjct: 850 EEKTYRNWMNS--LGVSPFVHHLYSDLYDGLIIFQLYDYIQPGLVDWSKVKKKFNKLKAR 1023
Query: 74 QMKLENVSVALEF---LDHESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWED 130
++EN + A+E + +KLV I + I+DGN L LGLVW L+ Y++++
Sbjct: 1024 FERIENCNYAVELGPQVKLVKVKLVGIAGQDILDGNPVLTLGLVWQLMRAYTLAILSKIT 1203
Query: 131 EGDDDAKKQTPKQRLLGWIQNKIPYLP-ITNF-NQNWQDGKALGALVDSCAPGLCPDWES 188
E + K ++ W+ +KI I+ F ++ DG + ++++ PG+ +W++
Sbjct: 1204 ENN----KPISDNEIITWVNSKIKKDDRISGFQDRKLNDGVIVARVIEAIKPGIV-NWDN 1368
Query: 189 WDP-----RKPVDNAREAMQQADDWLGVPQVITPEEII 221
D + + NAR A+ A +G PE+I+
Sbjct: 1369 IDCSARDYQDRLTNARYAIGLARK-IGAGVYALPEDIV 1479
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Frame = +1
Query: 18 QQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLE--VLSQKRMHHKYHQRPTFRQM 75
+Q F W N HL L D +DG +L + VL K ++H R +
Sbjct: 52 EQKAFAEWINRHLSDXPDCKHLLPLD-ADGTQLFGQMADGVLLCKLINHSVSNTIDERTI 228
Query: 76 KLENVSVALEFLDHESIKL------------VSIDSKAIVDGNLKLILGLVWTLIL---- 119
+N+S+ + HE++ L V+I + + G L+LGL+W +I
Sbjct: 229 NKQNLSL---YRRHENLTLAVNSAGAIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLL 399
Query: 120 -------HYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKIPYL----PITNFNQNWQDG 168
H + + + E +D + +P+Q LL W+ + I NF ++ +D
Sbjct: 400 SDINLAHHPGLVNLLLDGETIEDLIRLSPEQILLRWVNYHLNRAGCDRQIXNFGEDIKDS 579
Query: 169 KALGALVDSCAP 180
+A L+ +P
Sbjct: 580 EAYTHLLKQISP 615
>04951
Length = 2852
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Frame = +1
Query: 76 KLENVSVALEF---LDHESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISM--PVWED 130
K+EN A++ + +KLV I K I DGN L LGLVW L+ Y++++ + ED
Sbjct: 4 KIENCEYAVQLGPQMKVCKMKLVGIGGKDIHDGNPVLTLGLVWQLMRAYTLAILSKLTED 183
Query: 131 EGDDDAKKQTPKQRLLGWIQNKIPY-LPITNF-NQNWQDGKALGALVDSCAPGLCPDWES 188
KK ++ W+ +K+ I +F + DG + +++S PG+ +WE+
Sbjct: 184 ------KKPIQDSEIVDWVNSKVKKDERIGSFQDSKLNDGVIVAKVIESIKPGIV-NWEN 342
Query: 189 WDPR--KPVD---NAREAMQQADDWLGVPQVITPEEIIH 222
+P +P D NAR A+ A +G PE+I+
Sbjct: 343 INPNASEPDDRLANARYAIGLARK-IGAGVYALPEDIVE 456
>18202
Length = 424
Score = 40.8 bits (94), Expect = 0.007, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Frame = -1
Query: 22 FTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLS-QKRMHHKYHQRPTFRQMKLENV 80
+ W N L VN + N+ + + +G L L++VL+ + + K Q +
Sbjct: 379 YLSWANSVLCEVNSSVENVSS-IQEGRVLCELIDVLAPEAGLLDKVQASGKSGQRAF--I 209
Query: 81 SVALEFLDHESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQ- 139
AL+ + + IK+V ++ I+DG++K +L ++W LIL+Y I G++ ++
Sbjct: 208 YAALDHMKNHGIKIV-FSTQDIMDGDIKSLLDVMWLLILNYGIHFI-----GNNSFQRSV 47
Query: 140 -TPKQRLLGWIQNKI 153
K+ LL W Q ++
Sbjct: 46 GAGKKNLLDWCQGEL 2
>32088
Length = 1928
Score = 37.4 bits (85), Expect = 0.091, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 21/156 (13%)
Frame = +1
Query: 15 KKIQQNTFTRWCNEHLK----C-----VNKRIGNLQTDLSDGLRLIALLEVLSQKRMHHK 65
K +Q F W N HLK C VN+ +L + DG+ L L+ + +
Sbjct: 1255 KDGEQKAFAAWINRHLKDDPDCKHLMEVNEEGDDLFKKVGDGILLCKLINHSVSNTIDER 1434
Query: 66 YHQRPTFR-QMKLENVSVALEFLDHESIKLVSIDSKAIVDGNLKLILGLVWTLIL----- 119
+ + EN+++A+ V+I + + G L+LGL+W +I
Sbjct: 1435 AINKSNLNVYHRHENLTLAVNSAGSIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLS 1614
Query: 120 ------HYSISMPVWEDEGDDDAKKQTPKQRLLGWI 149
H + + E E +D + +P++ LL W+
Sbjct: 1615 DINLAHHPGLVNLLREGETIEDFMRLSPEEILLRWV 1722
>31031
Length = 423
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 13/99 (13%)
Frame = +1
Query: 1831 GSVSAYGPGLVYGVANKTATFTI---------VTEDAGEGGLDLAIEGPS---KAEISCI 1878
G S +GPGL F I +T+ GEG +++ + + +
Sbjct: 4 GGYSGWGPGLKSHFNVPVRYFYIQAVDTKGNHLTDSVGEGAFQVSVTQNGQRVRMRVDVL 183
Query: 1879 DNKDGTCTVTYLP-TLPGDYSILVKYNDKHIPGSPFTAK 1916
D DG V P + P + +K+ND+H+ SP+ K
Sbjct: 184 DRHDGVYIVRLKPFSDPEHIVVSIKHNDQHVAHSPYQIK 300
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6755100|ref|NP_035249.1| ErbB3-binding protein 1 [Mus
musculus]
(394 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05442 395 e-114
15458 82 8e-30
25432 35 0.035
23585 33 0.29
20404 32 0.30
00491 30 1.2
02696 30 1.3
26885 30 1.6
>05442
Length = 1171
Score = 395 bits (1016), Expect(2) = e-114, Method: Compositional matrix adjust.
Identities = 177/284 (62%), Positives = 230/284 (80%)
Frame = +1
Query: 75 AFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVIGVAQGTQ 134
AFPT +S+NNC+CHFSPLKSD D LK+GD+VKIDLG HVDG+I AHT V+G ++ +
Sbjct: 133 AFPTCVSINNCICHFSPLKSDPDITLKDGDMVKIDLGAHVDGYIGVAAHTLVVGASKDKK 312
Query: 135 VTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHV 194
V+GRKADV+ AAH+ EAALR+VKPGN+N QVT+ KVA ++NC P+EGMLSHQL + V
Sbjct: 313 VSGRKADVMTAAHMAVEAALRMVKPGNENDQVTDCIQKVAEAYNCKPVEGMLSHQLLKDV 492
Query: 195 IDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQ 254
IDG+K IQNP++ Q+KDH+K EFEVHEVYA+DV++S+GEGK ++ RTT+YK+
Sbjct: 493 IDGDKAFIQNPSEAQRKDHDKCEFEVHEVYAIDVIISTGEGKGRELDTRTTVYKKR-DMV 669
Query: 255 YGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGE 314
Y LKMK SR F SE +++F MPF+LR EDEKKA+MGVVEC KH L+QPF VL+++EGE
Sbjct: 670 YQLKMKASRQFLSETDKKFGLMPFSLRLLEDEKKAKMGVVECVKHGLMQPFGVLFDREGE 849
Query: 315 FVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALL 358
VAQFK TV+LMPNGP++IT PF+ +LY+S+++V+D E+KALL
Sbjct: 850 VVAQFKTTVILMPNGPLKITGLPFQSELYQSDLKVEDEEVKALL 981
Score = 33.9 bits (76), Expect(2) = e-114, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 31 VLRSLVEASSSGVSVLSLCEKGDAMIMEET 60
+L+ L+ +G SVL LCE GD+ ++EET
Sbjct: 2 ILKELIGKCEAGASVLGLCELGDSRLLEET 91
>15458
Length = 965
Score = 81.6 bits (200), Expect(2) = 8e-30, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = -3
Query: 174 AHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSG 233
A + NC P+EGMLSHQL + VIDG+K IQNP++ Q++ + + + +L
Sbjct: 549 AAALNCKPVEGMLSHQLLKDVIDGDKAFIQNPSEAQRRIMTNVNLKFTKFTPLTLLSVLE 370
Query: 234 EGKAKDAGQRT-TIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLR 281
+ ++ Q KRD Y LKMK SR F SE +++F MPF+LR
Sbjct: 369 RERVENWTQELQCTKKRDMV--YQLKMKASRQFLSETDKKFGLMPFSLR 229
Score = 66.6 bits (161), Expect(2) = 8e-30, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 40/46 (86%)
Frame = -1
Query: 313 GEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALL 358
GE VAQFK TV+LMPNGP++IT PF+ +LY+S+++V+D E+KALL
Sbjct: 230 GEVVAQFKTTVILMPNGPLKITGLPFQSELYQSDLKVEDEEVKALL 93
>25432
Length = 557
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
Frame = -3
Query: 154 LRLVKPGNQNTQVTEAWNKV--AHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKK 211
+RL G + +V E++ ++ PI + H + Q+ I KT+ P K
Sbjct: 450 VRLCDVGERIQEVMESYEVELDGKTYQVKPIRNLNGHSVGQYRIHAGKTV---PI---VK 289
Query: 212 DHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFFSEVER 271
+ E EVYA++ S+G+G D + + K L++ S+ + +
Sbjct: 288 GGDATRMEEGEVYAIETFGSTGKGVVHDDMETSHYMKNFEVGHVPLRLAKSKQLLNVINN 109
Query: 272 RFDAMPFTLRAFE 284
F + F R +
Sbjct: 108 NFSTLAFCRRWLD 70
>23585
Length = 1625
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -3
Query: 136 TGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQ 192
GRK D + LC +RLVKPG VT +V H NC+ G L + Q
Sbjct: 1218 NGRKPDPV----LCPARMIRLVKPGGYIVNVT----RVEHLNNCSDYIGRLEQLMDQ 1072
>20404
Length = 396
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 115 DGFIANVAHTFVIGVAQGTQVTGRKADVIKAAHLCAEAAL 154
D + V++ IG++QG +T KA +IK LC+ A L
Sbjct: 271 DLLLYRVSNFLWIGISQGLALTLAKATLIKLKSLCSPALL 390
>00491
Length = 1057
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 163 NTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVID 196
NTQ+ ++K+ H +NC P + H+L ++I
Sbjct: 978 NTQLMVIFHKIMHMYNCKPYPVIKKHKLYAYMIS 877
>02696
Length = 1092
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%)
Frame = -2
Query: 186 LSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQ 242
+ ++L+QH+ GEK II+ T++Q K++ K ++ +Y + + S E +++AGQ
Sbjct: 1034 ICNRLEQHISIGEKIIIRT*TNKQNKNNFKVQY--M*LYHIKL---SNEASSQEAGQ 879
>26885
Length = 416
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -2
Query: 155 RLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLK 191
R+ P N +N + H F C PIE HQ +
Sbjct: 397 RVYGPPESNAITGIIYNALGHRFKCAPIERQTQHQFR 287
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|71725365|ref|NP_001025153.1| Sec23 interacting
protein [Mus musculus]
(998 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11319 336 e-114
11763 173 1e-84
11761 169 7e-42
14501 122 5e-28
10413 79 8e-15
12662 46 9e-05
13622 36 0.074
01467 35 0.15
>11319
Length = 1706
Score = 336 bits (862), Expect(2) = e-114, Method: Compositional matrix adjust.
Identities = 163/350 (46%), Positives = 232/350 (66%), Gaps = 9/350 (2%)
Frame = +3
Query: 352 IPYTEEFSEKLEAEYKKAVSTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWGTTQ 411
+P+ E ++ LEAEYK A N WH+R+E P G+++VMH+ V V F +S PDEWG Q
Sbjct: 435 VPFDETVADSLEAEYKNATEHNDWHKRIELPRGDSVVMHSSTVFVHFHAASQPDEWGNVQ 614
Query: 412 DGQTRPRVVKRGIDDSLDEIPDGEMPQVDHLVFMVHGIGPVCDLRFRSIIECVDDFRVVS 471
Q RPRVVKRG+DD + GE +VDHL+F++HGIG CD++FR+I++CVDDFR +S
Sbjct: 615 SDQ-RPRVVKRGVDD-FGTVESGESEEVDHLIFVLHGIGETCDVQFRNIVDCVDDFRSIS 788
Query: 472 LKLLQTHFKKSVDEGKVSRVEFLPVHWHSALGGHATGVDRNIKKITLPSIGRFRHFTNET 531
+L+ +HF + G V RVE+LPV WH+A+ TGVD+ +K ITLPS + R F N T
Sbjct: 789 NELITSHFGPYTESGHVHRVEYLPVQWHAAVHSDTTGVDKRLKAITLPSTQKLRDFVNNT 968
Query: 532 LLDVLFYNSPTYCQAIVEKVEVEINRLHSLFMSRNPNFKGKVSVAGHSLGSLILFDILSN 591
L+D+LFY SP YCQ I +KV E+NRL LF++RNP F G+VSVAGHSLGS ILFD+L +
Sbjct: 969 LMDILFYTSPAYCQTICDKVCQEMNRLFQLFLARNPLFSGEVSVAGHSLGSSILFDLLLH 1148
Query: 592 QRDMCVSKSPGSVAVSNGVIKHSQFQEKLISEESKLMSDESC------DLDVEDEE---P 642
Q + + + S +K+S ++ ++ +SK S E +D E E
Sbjct: 1149QEEARDAADSAAFNGSTDTLKNSTESQEQMATKSKQESAEQIVKFKKDSVDPEGLEVVPE 1328
Query: 643 LTLHGTLEALSLFDYISTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKI 692
LTL L+ + L D + F++E+ID+++L MC+ DLK++G+P+GPR+K+
Sbjct: 1329LTLEQVLDKVGLKDKMPIFQQEQIDLDALTMCSEQDLKDLGLPMGPRRKL 1478
Score = 94.0 bits (232), Expect(2) = e-114, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = +2
Query: 262 YEPVQPHWFYCKEVEYKQLWMPFSVLDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYD 321
Y V+ HW Y K VE +++W FS LDS LE+ Y + + V+ TDGGRYDV +
Sbjct: 164 YHAVRHHWCYRKVVEGQEIWCTFSRLDSDKLEQQYLKERNGGAAAVVSTDGGRYDVEIGP 343
Query: 322 RMRKSVYWEEEPTEVRRCTWFYKGDTDSR 350
R+R+SVYW EEP ++RC+WFYK D D+R
Sbjct: 344 RLRRSVYWIEEPFPIQRCSWFYKRDRDNR 430
>11763
Length = 894
Score = 173 bits (439), Expect(2) = 1e-84, Method: Composition-based stats.
Identities = 79/150 (52%), Positives = 103/150 (68%)
Frame = +1
Query: 292 LEEIYNSVQPDPESVVLGTDGGRYDVYLYDRMRKSVYWEEEPTEVRRCTWFYKGDTDSRF 351
LEE + Q V+ TDGGRYDV + R+R++VYWEEEP ++RC+WF+K + D+R+
Sbjct: 7 LEEQFRKEQNGTAPEVVNTDGGRYDVEIQTRLRRAVYWEEEPGLIQRCSWFFKREADNRY 186
Query: 352 IPYTEEFSEKLEAEYKKAVSTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWGTTQ 411
+PY E + +LE EYK AV N+WH+R+E +TIVMHNP VIV F+ SS PDEWG Q
Sbjct: 187 VPYEEAQAARLEVEYKNAVERNEWHKRIELAGQDTIVMHNPNVIVHFKASSQPDEWGNVQ 366
Query: 412 DGQTRPRVVKRGIDDSLDEIPDGEMPQVDH 441
Q RPRVVKRG+DD + GE +VDH
Sbjct: 367 GDQMRPRVVKRGVDD-FGTVEPGESVEVDH 453
Score = 159 bits (403), Expect(2) = 1e-84, Method: Composition-based stats.
Identities = 72/134 (53%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
Frame = +2
Query: 442 LVFMVHGIGPVCDLRFRSIIECVDDFRVVSLKLLQTHFKKSVDEGKVSRVEFLPVHWHSA 501
LVF++HGIG +CD+RFR+I+ECVDDFR ++ L+QTHF G + RVEFLPVHWH A
Sbjct: 455 LVFVLHGIGDMCDVRFRNIVECVDDFRSIANGLIQTHFGPYSQGGHIHRVEFLPVHWHMA 634
Query: 502 LGGHATGVDRNIKKITLPSIGRFRHFTNETLLDVLFYNSPTYCQAIVEKVEVEINRLHSL 561
+ ATGVD +K ITLPS + R F N+TL+D+LFY SP YCQ I + V E+NRL +
Sbjct: 635 VHSEATGVDSRLKSITLPSTRKLRDFVNDTLMDILFYTSPAYCQIICDTVGQELNRLFQI 814
Query: 562 F-MSRNPNFKGKVS 574
F + N +G +S
Sbjct: 815 FWLETNLQRRGVIS 856
>11761
Length = 434
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/140 (59%), Positives = 100/140 (71%), Gaps = 4/140 (2%)
Frame = +2
Query: 385 ETIVMHNPKVIVQFQPSSVPDEWG----TTQDGQTRPRVVKRGIDDSLDEIPDGEMPQVD 440
+TIVMHNP VIV F+ SS PDEWG T Q Q RPRVVKRG+DD + GE +VD
Sbjct: 5 DTIVMHNPNVIVHFKASSQPDEWGNVQPTVQGDQMRPRVVKRGVDD-FGTVEPGESVEVD 181
Query: 441 HLVFMVHGIGPVCDLRFRSIIECVDDFRVVSLKLLQTHFKKSVDEGKVSRVEFLPVHWHS 500
HLVF++HGIG +CD+RF +I+ECVDDFR ++ L+QTHF G + RVEFLPVHWH
Sbjct: 182 HLVFVLHGIGDMCDVRFHNIVECVDDFRSIANGLIQTHFGPYSQGGHIHRVEFLPVHWHM 361
Query: 501 ALGGHATGVDRNIKKITLPS 520
A+ ATGVD +K ITLPS
Sbjct: 362 AVHSEATGVDSRLKSITLPS 421
>14501
Length = 413
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 67/90 (74%)
Frame = +3
Query: 492 EFLPVHWHSALGGHATGVDRNIKKITLPSIGRFRHFTNETLLDVLFYNSPTYCQAIVEKV 551
E+LPV WH+A+ TGVD+ +K ITLPS + R F N TL+D+LFY SP YCQ I +KV
Sbjct: 3 EYLPVQWHAAVHSDTTGVDKRLKAITLPSTQKLRDFVNNTLMDILFYTSPAYCQTICDKV 182
Query: 552 EVEINRLHSLFMSRNPNFKGKVSVAGHSLG 581
E+NRL LF++RNP F G+VSVAGHSLG
Sbjct: 183 CQEMNRLFQLFLARNPLFSGEVSVAGHSLG 272
>10413
Length = 578
Score = 79.3 bits (194), Expect = 8e-15, Method: Composition-based stats.
Identities = 34/57 (59%), Positives = 44/57 (77%)
Frame = +1
Query: 536 LFYNSPTYCQAIVEKVEVEINRLHSLFMSRNPNFKGKVSVAGHSLGSLILFDILSNQ 592
LFY SP YCQ I + V E+NRL +F++RNP F G+VS+AGHSLG+ ILFD+L +Q
Sbjct: 1 LFYTSPAYCQIICDTVGQELNRLFQIFLARNPTFNGEVSLAGHSLGASILFDLLMHQ 171
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = +2
Query: 647 GTLEALSLFDYISTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKI 692
G L + L D + F++E+ID+ESL MC+ DLK++G+P+GPRKK+
Sbjct: 335 GLLGKVGLKDKMDVFQQEQIDLESLSMCSEQDLKDLGLPMGPRKKL 472
>12662
Length = 771
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Frame = -1
Query: 538 YNSPTYCQAIVEKVEVEINRLHSLFMSRNPNFKGKVSVAGHSLGSLILFDILSNQRDMCV 597
+N P + + +N L S + +P+ GK+S+ G+S +
Sbjct: 648 FNRPGFGKTAFLTGSSFLNTLPSFEVDGDPD--GKLSMNGYS-----------THVNGTE 508
Query: 598 SKSPGSVAVSNGVIKHSQFQEKLISEESKLMSDESCDLDVEDEEPLT---LHGTLEALSL 654
S GS + G S +E + DE +LD +DE+ +T L L + L
Sbjct: 507 GTSEGSADKAAGDGSWSDAKELPWDQ------DEVDNLD-DDEDGMTSSALEMFLWSAGL 349
Query: 655 FDYISTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKI 692
Y+ F +EK+DME L+ + +LKE+G+P GPRK++
Sbjct: 348 EAYLHKFLQEKVDMELLVKMSDSELKEIGLPFGPRKRL 235
>13622
Length = 1144
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 652 LSLFDYISTFEKEKIDMESLLMCTVDDLKEMGI-PLGPRKKI 692
L L YI F++++ID + L +DLKE+GI G R+K+
Sbjct: 541 LGLGKYIDIFQQQEIDFSTFLTLNEEDLKELGIGTFGARRKM 666
>01467
Length = 1335
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -2
Query: 656 DYISTFEKEKIDMESLLMCTVDDLKEMGI-PLGPRKKI 692
DYI F + +I ME++L + DLK+MG+ LG RK I
Sbjct: 1334 DYIPVFLRHRITMETMLQLSDADLKQMGVYELGLRKAI 1221
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|7305031|ref|NP_038841.1| erythrocyte protein band
4.1-like 3 [Mus musculus]
(929 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00990 409 e-114
18811 193 2e-49
11374 188 8e-48
17332 142 7e-34
13951 67 4e-20
28244 78 1e-14
08363 68 1e-11
03469 67 3e-11
05888 56 5e-08
17536 35 0.13
12494 29 8.2
>00990
Length = 3161
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/377 (53%), Positives = 261/377 (69%), Gaps = 8/377 (2%)
Frame = +3
Query: 116 KSMQCKVTLLDGSEYGCDVDKRSRGQVLFDKVCEHLNLLEKDYFGLTYRD---AENQKNW 172
K +V LLDG ++D+ + G+ LFDKVC+HL+L+EKDYFGL + D + + K W
Sbjct: 252 KGFNYEVVLLDGEHVNFELDRNAEGRELFDKVCQHLDLIEKDYFGLQFVDERISNHLKCW 431
Query: 173 LDPAKEIKKQIRSGAWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVT 232
L P K I KQ + G W F F +KFYPPDP QL E +TR+ + LQ R DI+SG+LP +++T
Sbjct: 432 LSPDKRISKQKKGGPWLFDFALKFYPPDPTQLRESLTRWLVVLQTRRDILSGKLPATYLT 611
Query: 233 LALLGSYTVQSELGDYDPDEC-GNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAE 291
A+LGSY VQ+++GDYDP+E G +YI + FAPN T +L +K++ELH+ H+G TP EAE
Sbjct: 612 QAMLGSYCVQADVGDYDPNEHRGVEYIRDTPFAPNQTIDLLEKIVELHRQHKGQTPDEAE 791
Query: 292 MHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYK 351
+FLENAKKL+MYGVDLH A+D V+IMLGVCASGL +YR++LRI+RF WPK+LKISYK
Sbjct: 792 TNFLENAKKLAMYGVDLHAAQDVNNVDIMLGVCASGLQVYREKLRISRFVWPKILKISYK 971
Query: 352 RNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKK--FLT 409
R FYIK+RP + E++ FKL HR AKRLWK+CVEHH FFRL E F
Sbjct: 972 RRQFYIKVRPSDNSAMENSFCFKLATHRLAKRLWKICVEHHAFFRLREAEQSQNAAMFPR 1151
Query: 410 LGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGASVSE--NHEIYMKD 467
LGSKFRYSGRT QTR++S ++DRP PYFERS R + + +S+ E N Y KD
Sbjct: 1152LGSKFRYSGRTLYQTRQSSQILDRPNPYFERSQPARSSFAPPAKASSLDELSNRPDYWKD 1331
Query: 468 SVSAAEVGTGQYATTKG 484
E G G+ ++G
Sbjct: 1332-----EEGDGKRRPSEG 1367
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +3
Query: 869 KGGISETRIEKRIVITG--DADIDHDQALAQAIKEAKEQHPDMSVTKV 914
K GI TR+E ++V++ D + D+D ALA AI+ E +PDMSV ++
Sbjct: 2145 KDGIQHTRVEHKVVLSSADDEEFDYDAALADAIRSVTEFNPDMSVERI 2288
>18811
Length = 478
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 108/133 (81%)
Frame = -2
Query: 254 GNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKD 313
G DYI + FAPN EL +K++ELH+ H+G TP EAE+++LENAKKLSMYGVDLH A+D
Sbjct: 399 GADYIKDIPFAPNQAPELLEKIVELHRQHKGQTPDEAEVNYLENAKKLSMYGVDLHAAQD 220
Query: 314 SEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFESTIGF 373
V+IMLGVC+SGL +YRD+LRI+RF WPK++KISYKR +FY+K+RP + + E+++ F
Sbjct: 219 VNNVDIMLGVCSSGLQVYRDKLRISRFVWPKIIKISYKRKHFYVKVRPADNKGLETSVSF 40
Query: 374 KLPNHRAAKRLWK 386
+LP HR AKRLWK
Sbjct: 39 RLPTHRLAKRLWK 1
>11374
Length = 800
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 113/172 (65%), Gaps = 8/172 (4%)
Frame = +3
Query: 308 LHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQF 367
LH A+D V+IMLGVCASGL +YR++LRI+RF WPK+LKISYKR FYIK+RP +
Sbjct: 3 LHAAQDVNNVDIMLGVCASGLQVYREKLRISRFVWPKILKISYKRRQFYIKVRPSDNSAM 182
Query: 368 ESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKK--FLTLGSKFRYSGRTQAQTR 425
E++ FKL HR AKRLWK+CVEHH FFRL E F LGSKFRYSGRT QTR
Sbjct: 183 ENSFCFKLATHRLAKRLWKICVEHHAFFRLREAEQSQNAAMFPRLGSKFRYSGRTLYQTR 362
Query: 426 RASALIDRPAPYFERSSSKRYTM------SRSLDGASVSENHEIYMKDSVSA 471
+S +DRP PYFERS R T SRS+D + N Y KD + A
Sbjct: 363 HSSQTLDRPDPYFERSQPARNTYAAPSTRSRSVDELT---NRPDYWKDDLDA 509
>17332
Length = 473
Score = 142 bits (357), Expect = 7e-34, Method: Composition-based stats.
Identities = 74/157 (47%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
Frame = +2
Query: 126 DGSEYGCDVDKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQIR- 184
D S++ V +G +L +KVCE LNL EKDYFGL + DA Q +WLD K + Q++
Sbjct: 2 DDSDHQLQVKGNWKGILLQEKVCELLNLHEKDYFGLRFIDASGQTHWLDGNKSLSSQLKG 181
Query: 185 -SGAWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQS 243
F VKFY DP +L E+ITRY LQ++ DI+ GRLP +F + L +Y VQS
Sbjct: 182 CQTPHKLYFGVKFYAADPCKLREEITRYLFFLQVKQDILQGRLPVTFDEASELCAYAVQS 361
Query: 244 ELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHK 280
ELGD+DP + + Y+SEF F PN T+ELE +V LH+
Sbjct: 362 ELGDFDPRQHTDGYVSEFCFIPNQTEELERRVAGLHR 472
>13951
Length = 720
Score = 67.4 bits (163), Expect(2) = 4e-20, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = -2
Query: 116 KSMQCKVTLLDGSEYGCDVDKRSRGQVLFDKVCEHLNLLEKDYFGLTYRD---AENQKNW 172
K +V LLDG ++D+ + G+ LFDKVC+HL+L+EKDYFGL + D + + K W
Sbjct: 398 KGFNYEVVLLDGEHVNFELDRNAEGRELFDKVCQHLDLIEKDYFGLQFVDERISNHLKCW 219
Query: 173 LDPAKEIKK 181
L P K I K
Sbjct: 218 LSPDKRISK 192
Score = 49.3 bits (116), Expect(2) = 4e-20, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = -1
Query: 177 KEIKKQIRSGAWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDI 221
K+ + + + G W F F +KFYPPDP QL E +TR+ + L + ++
Sbjct: 204 KDFQNRKKGGPWLFDFALKFYPPDPTQLRESLTRWLVVLHVAGEL 70
>28244
Length = 422
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Frame = -1
Query: 329 LIYRDRLRINRFAWPKVLKISYKRNNF-YIKIRPGEFEQFESTIG-FKLPNHRAAKRLWK 386
L++ +I F WPK+ ++ +K + + E Q + I F+L + +A K LWK
Sbjct: 422 LVFEGNXKIGLFFWPKMTRLDFKGKKLTLVAVEDDENGQSQDHIFVFRLQSEKACKHLWK 243
Query: 387 VCVEHHTFFRLLLPEAPP---KKFLTLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSS 443
VEHH FFRL P P + F +GS+FRYSGRT+ QT + R + FER S
Sbjct: 242 CAVEHHAFFRLKGPVQGPNARQNFFRMGSRFRYSGRTEYQTSTMNRA--RRSVKFERKPS 69
Query: 444 KRYT 447
+RY+
Sbjct: 68 QRYS 57
>08363
Length = 1878
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +1
Query: 805 PGGAKLEISTKEVPVVHTETKTITYESSQVDPGADLEPGVLMSAQXXXXXXXXXXXXXXX 864
P ++ + TK VP+V TET+T+TYE D E GVL+SA
Sbjct: 151 PDVEEVPVPTKNVPLVKTETRTVTYEREGF--PFDGEDGVLVSASSHSTRMQTIETTTYK 324
Query: 865 XXXVKGGISETRIEKRIVITG-DADIDHDQALAQAIKEAKEQHPDMSVTKV 914
K G+ ETR+E R+V++ D D D+D ALA AI+ E +PDMSV ++
Sbjct: 325 TE--KDGVQETRVEHRVVLSSTDDDFDYDAALADAIRSVTEFNPDMSVERI 471
>03469
Length = 1275
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = -3
Query: 812 ISTKEVPVVHTETKTITYESSQVDPGADLEPGVLMSAQXXXXXXXXXXXXXXXXXXVKGG 871
+ TK VP+V TET+T+TYE D E GVL+SA K G
Sbjct: 1258 VPTKNVPLVKTETRTVTYEREGF--PFDGEDGVLVSASSHSTRMQTIETTTYKTE--KDG 1091
Query: 872 ISETRIEKRIVITG-DADIDHDQALAQAIKEAKEQHPDMSVTKV 914
+ ETR+E R+V++ D D D+D ALA AI+ E +PDMSV ++
Sbjct: 1090 VQETRVEHRVVLSSTDDDFDYDAALADAIRSVTEFNPDMSVERI 959
>05888
Length = 490
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Frame = -2
Query: 410 LGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTM------SRSLDGASVSENHEI 463
LGSKFRYSGRT Q R +S +DRP PYFERS R T SRS+D + N
Sbjct: 489 LGSKFRYSGRTLYQARHSSQTLDRPDPYFERSQPARNTYAAPSTRSRSVDELT---NRPD 319
Query: 464 YMKDSVSA 471
Y KD + A
Sbjct: 318 YWKDDLDA 295
>17536
Length = 486
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3
Query: 750 GEEVDQSAPEQEQPATVSHEEEQASTIRTSEGLEQKSH 787
G E+ P++ QP V+H ++ S I SEGL QKS+
Sbjct: 346 GNELQHCVPKKFQPLVVTHCKQIVSHITVSEGLGQKSY 233
>12494
Length = 925
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 651 IGGVSSTTQSWVQKLETKTEPVEAEVESTPHPQPLSTEKV 690
I G+SST + Q+ E K + + +STP P PL+ E +
Sbjct: 481 IRGISSTPMRFSQRSEKKNQTNPTQQQSTPPPSPLAPEII 362
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|8393794|ref|NP_058681.1| myotubularin-related protein
1 [Mus musculus]
(669 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
33160 409 e-114
04149 30 3.3
>33160
Length = 788
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 185/261 (70%), Positives = 220/261 (84%), Gaps = 1/261 (0%)
Frame = -3
Query: 360 GGYENESAYPNAELIFLEIHNIHVMRESLRKLKEIVYPSIDESHWLSNVDGTHWLEYIRV 419
GGYE+E +Y NAELIFL+IHNIHVMRES RKLKE +P+IDE+HWLS ++ THWLE+I+V
Sbjct: 786 GGYESEDSYQNAELIFLDIHNIHVMRESSRKLKEECFPAIDEAHWLSKIESTHWLEHIKV 607
Query: 420 LLAGAVRIADKIESGKTSVVIHCSDGWDRTSQLTSLAMLMLDSYYRTIKGFEALIEKEWI 479
+LAGAVRIAD +ES K SV++HCSDGWDRT+QLTSLAMLMLD +YRTI+GFE L+EKEWI
Sbjct: 606 ILAGAVRIADTVESNKRSVLVHCSDGWDRTAQLTSLAMLMLDPHYRTIRGFEVLVEKEWI 427
Query: 480 SFGHRFALRVGHGDDNHADADRSPIFLQFIDCVWQMTRQFPSAFEFNELFLITILDHLYS 539
SFGH+F RVGHG+D H+D +RSP+FLQF+DCVWQMTRQFP+AFEFNE FLITILDHLYS
Sbjct: 426 SFGHKFRQRVGHGEDKHSDDNRSPVFLQFVDCVWQMTRQFPNAFEFNEHFLITILDHLYS 247
Query: 540 CLFGTFLCNCEQQRIKEDVYTNTISLWSYINSQLDEFSNPFFVNY-ENHVLYPVASMSHL 598
CLFGTFL +C+ KE V T SLWS+IN QL+EF+NP + Y HV++PVAS+ +
Sbjct: 246 CLFGTFLFSCQMPADKEKVKERTQSLWSFINCQLEEFTNPLYAAYVHAHVIFPVASLRRI 67
Query: 599 ELWVNYYVRWNPRMRPQMPIH 619
LW YY RWNPRMRPQ PIH
Sbjct: 66 HLWTGYYCRWNPRMRPQEPIH 4
>04149
Length = 1107
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 562 TISLWSYINSQLDEFSNPFFVNYENHVL 589
+ LWSYI ++ F FFV+Y NH L
Sbjct: 372 CVCLWSYIAARHYFFLCYFFVSYRNHFL 455
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|9506983|ref|NP_062284.1| protein phosphatase 2a,
catalytic subunit, alpha isoform [Mus musculus]
(309 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08242 407 e-114
01173 295 1e-80
06084 295 2e-80
06264 288 2e-78
25536 285 1e-77
30980 177 4e-45
19040 173 1e-43
18336 106 1e-30
21146 118 3e-27
04295 65 4e-11
18967 62 2e-10
32330 53 2e-07
36367 47 8e-06
00990 33 0.14
19872 28 3.5
17953 27 7.8
29461 27 9.0
>08242
Length = 3368
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/275 (68%), Positives = 227/275 (82%), Gaps = 2/275 (0%)
Frame = -1
Query: 37 EILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVET 96
EIL +ESNVQ V PVTVCGD+HGQF+DL ELF++GG PDTNYLFMGD+VDRG+YSVET
Sbjct: 3368 EILVEESNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPDTNYLFMGDFVDRGFYSVET 3189
Query: 97 VTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLT 156
LL+ALKVRY +RIT++RGNHESRQITQVYGFYDECLRKYG+ VW+Y T++FDYL L+
Sbjct: 3188 FLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLS 3009
Query: 157 ALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGA 216
A++DG+IFC+HGGLSPSI TLD IR++DR QEVPH+GPMCDLLWSDP+D GWG+SPRGA
Sbjct: 3008 AIIDGKIFCVHGGLSPSIQTLDQIRSIDRKQEVPHDGPMCDLLWSDPEDMQGWGVSPRGA 2829
Query: 217 GYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIM 276
GY FG D+ FN AN + L+ RAHQLVMEGY W + V+T++SAPNYCYRCGN AAI+
Sbjct: 2828 GYLFGSDVVSQFNAANXIDLICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAIL 2649
Query: 277 ELDDTLKYSFLQFDPAPR--RGEPHVTRRTPDYFL 309
ELD+ L+ F F+ AP+ RG P + PDYFL
Sbjct: 2648 ELDEHLQRDFTIFEAAPQEARGIPS-KKPQPDYFL 2547
>01173
Length = 2619
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 194/279 (69%), Gaps = 1/279 (0%)
Frame = -1
Query: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
QL+ES+++ LC K++EI + + E+ P+ +CGD+HGQ++DL+ LF GG P++NYL
Sbjct: 2610 QLTESEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 2431
Query: 82 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
F+GDYVDRG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R+Y N
Sbjct: 2430 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 2254
Query: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
+WK FTD F+ LP+ A++D +IFC HGGLSP + +++ IR + R +VP +G +CDLLWS
Sbjct: 2253 LWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 2074
Query: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260
DPD + GWG + RG +TFG ++ F H + L L+ RAHQ+V +GY + R +VT+F
Sbjct: 2073 DPDKETMGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 1894
Query: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPH 299
SAPNYC N A+M +D+TL SF PA ++ P+
Sbjct: 1893 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKKFPY 1777
>06084
Length = 1739
Score = 295 bits (754), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 139/251 (55%), Positives = 179/251 (71%)
Frame = -2
Query: 59 HGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNH 118
HGQF+DLMELF+ GG+ PDTNY+FMGD+VDRGY+S+ET TLL+ LK ++ ++I +LRGNH
Sbjct: 1738 HGQFYDLMELFKTGGEMPDTNYVFMGDFVDRGYFSLETFTLLLTLKAKWPDKIVLLRGNH 1559
Query: 119 ESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLD 178
ESRQITQ+YGFYDEC KYGNAN W+Y +FD L + A++D I C+HGGLSP I T+D
Sbjct: 1558 ESRQITQIYGFYDECQTKYGNANAWRYCCRVFDLLTIAAIIDECILCVHGGLSPDIKTID 1379
Query: 179 HIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVS 238
IR ++R QE+PH+G CDL+WSDP+D W +SPRGAG+ FG ++ F +N L L+
Sbjct: 1378 QIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAMSPRGAGWLFGAKVTAEFVASNNLKLIC 1199
Query: 239 RAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEP 298
RAHQLV EGY + D +VT++SAPNYCYRCGN AA++ D + F P
Sbjct: 1198 RAHQLVHEGYKYMFDEKLVTVWSAPNYCYRCGNIAAVLSFTDAEHHEAKLFKAVPDSERV 1019
Query: 299 HVTRRTPDYFL 309
R YFL
Sbjct: 1018 IPPRTQTPYFL 986
>06264
Length = 999
Score = 288 bits (738), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 189/274 (68%), Gaps = 1/274 (0%)
Frame = -3
Query: 27 QVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDY 86
+++ LC K++EI + + E+ P+ +CGD+HGQ++DL+ LF GG P++NYLF+GDY
Sbjct: 997 EIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDY 818
Query: 87 VDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYF 146
VDRG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R+Y N +WK F
Sbjct: 817 VDRGRQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTF 641
Query: 147 TDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-D 205
TD F+ LP+ A++D +IFC HGGLSP + +++ IR + R +VP +G +CDLLWSDPD +
Sbjct: 640 TDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKE 461
Query: 206 RGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNY 265
GWG S RG +TFG ++ F H + L L+ RAHQ+V +GY + R +VT+FSAPNY
Sbjct: 460 TMGWGESDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNY 281
Query: 266 CYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPH 299
C N A+M +D+TL SF PA ++ P+
Sbjct: 280 CGEFDNAGAMMSVDETLMCSFQILKPADKKKFPY 179
>25536
Length = 486
Score = 285 bits (730), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 133/148 (89%), Positives = 145/148 (97%)
Frame = +1
Query: 1 MDEKLFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHG 60
++E+ K+LDQWIEQLN+CKQLSE+QVK+LCEKAKEIL+KESNVQEV+CPVTVCGDVHG
Sbjct: 43 VEERAAAKDLDQWIEQLNDCKQLSENQVKTLCEKAKEILSKESNVQEVKCPVTVCGDVHG 222
Query: 61 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES 120
QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETV+LLVALKVR+R+RITILRGNHES
Sbjct: 223 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVSLLVALKVRFRDRITILRGNHES 402
Query: 121 RQITQVYGFYDECLRKYGNANVWKYFTD 148
RQITQVYGFYDECLRKYGNANVWKYFTD
Sbjct: 403 RQITQVYGFYDECLRKYGNANVWKYFTD 486
>30980
Length = 765
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +3
Query: 227 TFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSF 286
TFNH+NGLTL+SRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDD LKYSF
Sbjct: 3 TFNHSNGLTLISRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDALKYSF 182
Query: 287 LQFDPAPRRGEPHVTRRTPDYFL 309
LQFDPAPRRGEPHVTRRTPDYFL
Sbjct: 183 LQFDPAPRRGEPHVTRRTPDYFL 251
>19040
Length = 452
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 107/151 (70%)
Frame = -3
Query: 29 KSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVD 88
+ LC K++EI ++ + E+ P+ +CGD+HGQ+ DL+ LF GG P NYLF+GDYVD
Sbjct: 450 RGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYVD 271
Query: 89 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTD 148
RG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R+Y N +WK FTD
Sbjct: 270 RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NVKLWKTFTD 94
Query: 149 LFDYLPLTALVDGQIFCLHGGLSPSIDTLDH 179
F+ LP+ A++D +IFC HGGLSP + ++
Sbjct: 93 CFNCLPVAAIIDEKIFCCHGGLSPDLQGMEQ 1
>18336
Length = 465
Score = 106 bits (265), Expect(3) = 1e-30, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 74/108 (68%)
Frame = +2
Query: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
QLSE + ++ ++ IL + + +R +CGD+HGQ++DL+ LF GG P++NYL
Sbjct: 11 QLSEQK*EAYV*ISRNILESAYSFR-IRSTT*ICGDIHGQYYDLLRLFEYGGFPPESNYL 187
Query: 82 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
F+GDYVDRG S+ET+ LL+A K++Y E +LRGNHE I ++YGF
Sbjct: 188 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 331
Score = 43.5 bits (101), Expect(3) = 1e-30, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +1
Query: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIF 164
YDEC R+Y N +WK FTD F+ LP+ A++D +IF
Sbjct: 331 YDECKRRY-NIKLWKTFTDCFNCLPIAAIIDVKIF 432
Score = 20.8 bits (42), Expect(3) = 1e-30, Method: Compositional matrix adjust.
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 164 FCLHGGLSPSI 174
C HGGLSP +
Sbjct: 429 LCCHGGLSPDL 461
>21146
Length = 408
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +3
Query: 192 EGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNW 250
+GPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNH+NGLTL+SRAHQLVME W
Sbjct: 114 QGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHSNGLTLISRAHQLVMEVMFW 290
>04295
Length = 748
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = -1
Query: 223 DISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTL 282
D+ F + + L L++RAHQ+V +GY + R +VT+FSAPNYC N +M +D+TL
Sbjct: 745 DVVSKFLNRHDLDLITRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETL 566
Query: 283 KYSFLQFDPAPRRGE 297
SF P+ ++ +
Sbjct: 565 MCSFQILKPSEKKAK 521
>18967
Length = 440
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%)
Frame = +2
Query: 234 LTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 293
L L+ RAHQLV EG + + +VT++SAPNYCYRCGN AAI+ + + F P
Sbjct: 2 LDLICRAHQLVNEGIKYMFEGKLVTVWSAPNYCYRCGNVAAILSFETAQQRQTKIFLAVP 181
Query: 294 RRGEPHVTRRTPDYFL 309
+ T YFL
Sbjct: 182 DSERVIPKQNTTPYFL 229
>32330
Length = 226
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1
Query: 287 LQFDPAPRRGEPHVTRRTPDYFL 309
LQFDPAPRRGEPHVTRRTPDYFL
Sbjct: 1 LQFDPAPRRGEPHVTRRTPDYFL 69
>36367
Length = 827
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 25/152 (16%)
Frame = +1
Query: 167 HGGL-SPSIDTLDHIRALDRLQEVPHEGPMCD------LLWSDP---------------D 204
HGG+ SP + H+ A++++ VP P D +LWSDP +
Sbjct: 1 HGGIPSPENEGGGHLEAINKIP-VPLSDPEVDSPMAWEILWSDPISVDLVSPEVLKDMKE 177
Query: 205 DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPN 264
G S RG + F + F NGL+ V RAH++ G+ ++T+FS+
Sbjct: 178 HHGFTFNSRRGTAHFFSCNALLAFLERNGLSHVIRAHEVQEVGFQVQQQGKLLTVFSSSR 357
Query: 265 YCYRCGNQAAIMELDDTLKYSFLQFD---PAP 293
YC G+ A L D K ++ D P P
Sbjct: 358 YC--GGSNEAACVLADNYKLRMIRIDTT*PGP 447
>00990
Length = 3161
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -3
Query: 8 KELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVH 59
+ + W+ L LS SL + ++L S V + CP T C H
Sbjct: 1581 RPIVPWVPSLVRVASLSPGSWSSLSLPSMDLLAPRSIVPPLHCPPTACRPSH 1426
>19872
Length = 446
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 181 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFG-QDI 224
R + RLQEV GP+C ++ + G + R G +G QD+
Sbjct: 218 RQIGRLQEVSRAGPLCGVVAQHLTKQXGLVVEVRVLGEVWGKQDV 84
>17953
Length = 626
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Frame = -2
Query: 232 NGLTLVSRAHQLVMEGYNWCHDR------NVVTIFSAPNYCYRCGNQAAIME 277
N L + RAH+ GY +++TIFSAPNY N+ ++
Sbjct: 616 NNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKVQLLS 461
>29461
Length = 456
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 133 CLRKYGNANVWKYFTDLFD 151
C +++ ANVW+YF D++D
Sbjct: 305 C*KEFLKANVWRYFCDMYD 361
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|111494232|ref|NP_067505.2| solute carrier family 4
(anion exchanger), member 8 [Mus musculus]
(1089 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14939 219 e-113
17976 181 3e-53
18083 131 1e-30
15748 32 1.7
>14939
Length = 1186
Score = 219 bits (557), Expect(2) = e-113, Method: Compositional matrix adjust.
Identities = 100/150 (66%), Positives = 120/150 (80%)
Frame = -1
Query: 719 FPTRVRSMVSDFAVFLTIFTMVVLDFLIGVPSPKLQVPNVFKPTRDDRGWFINPIGPNPW 778
FPT VR+ +SDF+V + I +MVV D +G+P+PKL VP F PT RGW INP+G NPW
Sbjct: 1114 FPTMVRATLSDFSVLIAILSMVVFDICVGLPTPKLHVPETFAPTNPKRGWLINPVGENPW 935
Query: 779 WTVIAAIIPALLCTILIFMDQQITAVIINRKEHKLKKGCGYHLDLLMVAVMLGVCSIMGL 838
WT +AA+IPALL ILIFMDQQITAVI+NRKE+KL KG GYHLDL +V+V++ +CS +GL
Sbjct: 934 WTTLAAVIPALLAVILIFMDQQITAVIVNRKENKLVKGRGYHLDLFIVSVLIILCSFLGL 755
Query: 839 PWFVAATVLSITHVNSLKLESECSAPGEQP 868
PWFVAATVLSI HVNSLK ES+CSAP P
Sbjct: 754 PWFVAATVLSINHVNSLKKESQCSAPANNP 665
Score = 209 bits (532), Expect(2) = e-113, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 149/221 (67%), Gaps = 1/221 (0%)
Frame = -3
Query: 864 PGEQPKFLGIREQRVTGLMIFVLMGCSVFMTAVLKFIPMPVLYGVFLYMGVSSLQGIQFF 923
PGEQPKFLG+REQRVTG+ IF+L+G SV +T+VLKFIPMPVLYGVFLYMGVSSL+G+Q
Sbjct: 680 PGEQPKFLGVREQRVTGITIFLLIGISVMLTSVLKFIPMPVLYGVFLYMGVSSLRGMQLV 501
Query: 924 DRLKLFGMPAKHQPDFIYLRHVPLRKVHLFTLVQLTCLVLLWVIKA-SPAAIVFPMMVLA 982
R+ ++ MPAK+Q D ++LRHV +VHLFT++Q+ CL+ LW IK+ +I FP+MVLA
Sbjct: 500 HRVLIWFMPAKYQWDLMFLRHVRTNRVHLFTIIQIFCLLCLWGIKSYKKISIAFPIMVLA 321
Query: 983 LVFVRKVMDLCFSKRELSWLDDLMPESXXXXXXXXXXXXXXXXXXMLDIGGDKFPLESRK 1042
+ FVRK +D F +REL WLDD+MPE+ +++ G PL
Sbjct: 320 MCFVRKALDWVFDQRELKWLDDIMPEAHKRAKEDEIKKQEEQRFSLIE-GSTSIPLA--- 153
Query: 1043 LLSSPGKSSSFRCDPSEINISDEMPKTTVWKALSINSGNTK 1083
+ + + + + ++NIS+EM +T +WK++ N ++
Sbjct: 152 -MGLNMEHITIQAEMDQVNISEEMSRTALWKSIMHNESSSN 33
>17976
Length = 781
Score = 181 bits (459), Expect(2) = 3e-53, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 132/214 (61%), Gaps = 17/214 (7%)
Frame = +1
Query: 872 GIREQRVTGLMIFVLMGCSVFMTAVLKFIPMPVLYGVFLYMGVSSLQGIQFFDRLKLFGM 931
G+REQR+TGLM+ +L G +V TAVLKFIPM VLYGVFLYMG+++L+G+QF DR+ L
Sbjct: 139 GVREQRLTGLMVGLLSGLTVLFTAVLKFIPMAVLYGVFLYMGMAALKGMQFIDRILLMLK 318
Query: 932 PAKHQPDFIYLRHVPLRKVHLFTLVQLTCLVLLWVIKA-SPAAIVFPMMVLALVFVRKVM 990
PAK+QPD YLRHVP+++VH+FT +Q+ CL +LWVIK+ +I+FP+MVL FVRK +
Sbjct: 319 PAKYQPDTTYLRHVPIKRVHIFTAIQVVCLAVLWVIKSVKSVSIIFPIMVLGTCFVRKGL 498
Query: 991 DLCFSKRELSWLDDLMPESXXXXXXXXXXXXXXXXXXMLD-----IGGD------KFPLE 1039
D F++ EL WLDD+MP++ +G D +F +E
Sbjct: 499 DYLFTQGELKWLDDIMPDAAKKKKEDASQLHHKDAEADRKEKESLLGEDAYNRLVEFKVE 678
Query: 1040 SRKLLSSPGKSSSF-----RCDPSEINISDEMPK 1068
KL + GK CD INI +E+ +
Sbjct: 679 HEKLDVADGKYGQRFTHRPSCDTDRINIIEELSR 780
Score = 47.4 bits (111), Expect(2) = 3e-53, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +3
Query: 837 GLP-WFVAATVLSITHVNSLKLESECSAPGEQPKFLG 872
GLP VAATV ++ H+ SLK ESEC+APGE+P FLG
Sbjct: 30 GLPLGTVAATVSALAHIMSLKKESECTAPGERPTFLG 140
>18083
Length = 865
Score = 131 bits (330), Expect = 1e-30, Method: Composition-based stats.
Identities = 78/202 (38%), Positives = 122/202 (60%), Gaps = 4/202 (1%)
Frame = -3
Query: 793 ILIFMDQQITAVIINRKEHKLKKGCGYHLDLLMVAVMLGVCSIMGLPWFVAATVLSITHV 852
+L FMDQ I+A ++N ++K+KKG YH DLL++AV+ V S+ P AA S HV
Sbjct: 863 LLFFMDQNISAALVNAPQNKMKKGTAYHWDLLVIAVVNAVISVFAFPMVHAALPHSPLHV 684
Query: 853 NSLKLESECSAPGEQPK-FLGIREQRVTGLMIFVLMGCSVFMTAVLKFIPMPVLYGVFLY 911
+L E G + + +RE R+T ++ +L+G S+ + VL +IP PVLYG+FLY
Sbjct: 683 RALADVEERVVQGHITQTVVRVRETRITAILSHILIGLSILIMFVLAYIPTPVLYGLFLY 504
Query: 912 MGVSSLQGIQFFDRLKLFGMPAKHQPDFIYLRHVPLRKVHLFTLVQLTCLVLLWV---IK 968
+ +++L Q F+R+ LF P Y+RHVP RKVH+FTL+QL LV+L V +
Sbjct: 503 VAITALYDNQMFERITLFFTEQSAYPPTHYIRHVPQRKVHIFTLIQLLQLVVLCVFGFVS 324
Query: 969 ASPAAIVFPMMVLALVFVRKVM 990
+ + FP+++ L+ +R ++
Sbjct: 323 FAYLKMFFPVLIFLLIPIRHMV 258
>15748
Length = 1249
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = +1
Query: 147 EDGGERWSKPYVATLSLHSLFELRSCLINGSVL-----LDMRASSIEEISDLILDQQELL 201
++ G RW Y+ ++ L L L L+ +++ LD R++S+EE DLI
Sbjct: 445 KEDG*RWLSTYLLSVCLCXLGTLNLSLLFMAIVFESTPLDQRSASVEEDRDLIHHFAPKK 624
Query: 202 RDLSDSVRVKVREALLKKHHHQNERRRNNLIPIVRSFAEVGKKQSDPHSMDRDGQTVSP 260
R + VR++ +KH H N +N + FAE+ K + ++++ Q + P
Sbjct: 625 RPV--GVRIETFRTDTRKHTHTN---KNPVGS*DLKFAELFKSNYNSNALNSSLQQLIP 786
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31542427|ref|NP_031814.2| casein kinase 2, alpha 1
polypeptide [Mus musculus]
(391 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03508 402 e-113
00638 145 3e-47
12704 126 1e-29
01060 106 2e-23
14126 104 6e-23
01707 97 1e-20
04591 93 2e-19
32000 87 2e-17
04138 87 2e-17
29581 85 4e-17
01756 76 2e-14
21079 76 2e-14
15910 72 3e-13
26560 69 4e-12
23319 69 4e-12
00300 62 4e-10
13212 62 5e-10
12786 61 6e-10
12721 61 6e-10
01392 61 9e-10
30755 60 1e-09
28638 60 1e-09
01966 60 1e-09
14420 57 9e-09
27405 57 2e-08
18921 57 2e-08
18287 56 2e-08
31885 55 4e-08
03294 55 5e-08
19761 55 5e-08
26711 55 5e-08
18484 55 6e-08
09606 54 9e-08
19094 54 1e-07
13592 53 2e-07
18401 50 1e-06
03240 49 2e-06
21433 49 4e-06
13078 49 4e-06
31489 48 9e-06
04852 46 2e-05
13066 46 2e-05
07940 46 3e-05
11185 45 7e-05
00715 44 1e-04
17975 42 4e-04
37602 41 0.001
14116 40 0.001
01718 40 0.002
01106 39 0.003
26009 39 0.004
05084 39 0.004
06358 38 0.005
00392 38 0.007
21800 37 0.012
32359 28 0.020
27546 36 0.030
02638 35 0.039
18481 35 0.053
28157 35 0.066
29360 34 0.079
15931 33 0.13
19301 33 0.16
11801 33 0.20
26909 33 0.22
29590 33 0.24
14104 33 0.26
12672 31 0.98
27274 30 1.2
35032 30 1.4
37063 30 1.5
17932 30 1.8
16350 30 2.0
20513 29 3.3
18663 29 4.0
20773 28 5.2
28419 28 6.3
20152 28 9.2
>03508
Length = 1463
Score = 402 bits (1034), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/233 (80%), Positives = 201/233 (86%)
Frame = +1
Query: 1 MSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINIT 60
+S P+PSRARVY DVNTH+ REYWDYESHVVEWGNQDDYQ+VRKLGRGKYSEVFEAIN+T
Sbjct: 481 VSMPLPSRARVYADVNTHKAREYWDYESHVVEWGNQDDYQIVRKLGRGKYSEVFEAINVT 660
Query: 61 NNEXXXXXXXXXXXXXXXXXXXXXLENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD 120
NNE LENLRGG N+ITL IVKDPVSRTPAL+FEHVNNTD
Sbjct: 661 NNEKCVIKILKPVKKKKIKREIKILENLRGGTNVITLLAIVKDPVSRTPALIFEHVNNTD 840
Query: 121 FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
FKQLYQT TDYDIRFY+YE++KALD+CHSMGIMHRDVKPHNVMIDHE++KLRLIDWGLAE
Sbjct: 841 FKQLYQTFTDYDIRFYLYELMKALDFCHSMGIMHRDVKPHNVMIDHENKKLRLIDWGLAE 1020
Query: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
FYHPG EYNVRVASRYFKGPELL+DYQMYDYSLDMWSLGCM ASMIFRKEP
Sbjct: 1021FYHPGMEYNVRVASRYFKGPELLLDYQMYDYSLDMWSLGCMFASMIFRKEPLL 1179
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/115 (77%), Positives = 97/115 (84%), Gaps = 3/115 (2%)
Frame = +2
Query: 216 WSLGCMLASM---IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
W+ G A + K PFFHGHDNYDQLVRIAKVLGT+DLY YI+KY I+LDPRFNDI
Sbjct: 1118 WTCGVWAACLPA*SSGKSPFFHGHDNYDQLVRIAKVLGTDDLYGYIEKYQIDLDPRFNDI 1297
Query: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
LGRHSRKRWERFVHSENQHL+SPEALDFLDKLLRYDH RLTAREAM+HPYF +
Sbjct: 1298 LGRHSRKRWERFVHSENQHLISPEALDFLDKLLRYDHNERLTAREAMDHPYFXPI 1462
>00638
Length = 1595
Score = 145 bits (367), Expect(2) = 3e-47, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 71/75 (94%)
Frame = +2
Query: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKAL 144
LENLRGG N+ITL IVKDPVSRTPAL+FEHVNNTDFKQLYQT TDYDIRFY+YE++KAL
Sbjct: 278 LENLRGGTNVITLLAIVKDPVSRTPALIFEHVNNTDFKQLYQTFTDYDIRFYLYELMKAL 457
Query: 145 DYCHSMGIMHRDVKP 159
D+CHSMGIMHRDVKP
Sbjct: 458 DFCHSMGIMHRDVKP 502
Score = 61.2 bits (147), Expect(2) = 3e-47, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 35 NQDDYQLVRKLGRGKYSEVFEAINITNNE 63
NQDDYQ+VRKLGRGKYSEVFEAIN+TNNE
Sbjct: 127 NQDDYQIVRKLGRGKYSEVFEAINVTNNE 213
>12704
Length = 641
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = +3
Query: 1 MSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINIT 60
++ P+PSRARVY DVNTH+PREYWDYESHVVEWGNQDDYQ+VRKLGRGKYSEVFEAINIT
Sbjct: 423 ITMPLPSRARVYADVNTHKPREYWDYESHVVEWGNQDDYQIVRKLGRGKYSEVFEAINIT 602
Query: 61 NNE 63
NNE
Sbjct: 603 NNE 611
>01060
Length = 1800
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 123/242 (50%), Gaps = 7/242 (2%)
Frame = +1
Query: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDY 146
NI+ L D++ + LVFE ++ D K L ++ Y+++I+ + +
Sbjct: 253 NIVCLEDVIME--DERLFLVFEFLS-MDLKMYIDKFPEGVVLDRRLVKSYVFQIVTGIXF 423
Query: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVD 205
CH I+HRD+KP N++I+H +++ D+G+A F P + Y V + +++ PE+L+
Sbjct: 424 CHQRRIVHRDLKPQNLLINHTG-AIKIADFGMARTFALPVRAYTHEVVTLWYRAPEILMG 600
Query: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 265
Y +D+WS+G + A M+ R P F G DQL +I +++GT + + + +
Sbjct: 601 ASKYSTPVDVWSIGTIFADMLIRT-PIFKGDSEIDQLFKIFRIIGTPTEQTWPEFHKL-- 771
Query: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
P FN + W+ SE + LD +++ L+ D R++ ++ ++H YF
Sbjct: 772 -PAFNGMF-----PLWKEGKLSETLTDLDSLGLDLIERTLKCDPAQRISCKKMLQHAYFL 933
Query: 326 TV 327
V
Sbjct: 934 NV 939
>14126
Length = 1265
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 128/256 (50%), Gaps = 10/256 (3%)
Frame = +3
Query: 92 PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKAL 144
PN++ L D+ + ++ LVFE++ + L + L I+ M ++L +
Sbjct: 378 PNVVRLLDVSHNTITDREIRLNLVFEYIEHDLATYLAKCPSPGLGPDRIKDLMLQLLNGV 557
Query: 145 DYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 204
D+ HS I+HRD+KP N++I + R L+L D+GLA Y V + +++ PE+L+
Sbjct: 558 DFLHSNRIVHRDLKPQNLLISKDGR-LKLADFGLARIYSFHMALTTVVVTLWYRSPEVLM 734
Query: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
+ Y S+D+WS GC+ A + F + F G +DQL +I +V+G D+ + ++
Sbjct: 735 QAE-YGTSVDIWSCGCIFAEL-FTRRALFKGSSEFDQLKKIFEVIGLPPAGDWPEGVSVH 908
Query: 265 LDPRFNDILGRHSRKRWERFVHSENQHLV---SPEALDFLDKLLRYDHQSRLTAREAMEH 321
R + Q LV P+A D ++K+L + R+++RE++ H
Sbjct: 909 -------------RNSFRPTPPVPLQTLVPEMDPQAKDLMEKMLVFKSGRRISSRESLLH 1049
Query: 322 PYFYTVVKDQARMSST 337
PY + D R SS+
Sbjct: 1050PYLRDDL-DSIRTSSS 1094
>01707
Length = 757
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 9/223 (4%)
Frame = +1
Query: 37 DDYQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXX-----XXXXXXXXXXLENLRGG 91
+ Y+ + K+G G Y VF+ N ++ L+ L+
Sbjct: 64 EKYEKIGKIGEGSYGVVFKCRNKETSQLVAIKKFVESEDDPLIKKIAMREIRMLKQLKH- 240
Query: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCH 148
PN++ L ++ + + LVF++V++T +L + L + ++ +Y+ L A+++CH
Sbjct: 241 PNLVRLIEVFRR--KKRLHLVFDYVDHTLLNELDRYPRGLPEPMVKRIIYQTLLAVNFCH 414
Query: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
+HRDVKP N++I + +++L D+G A PG EY VA+R+++ PELLV
Sbjct: 415 QYNTIHRDVKPENILITRQG-QVKLCDFGFARILTGPGDEYTDYVATRWYRAPELLVGDT 591
Query: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 250
Y +D+W++GC+ A ++ + + G + DQL I K LG
Sbjct: 592 QYGPPVDVWAIGCVFAELL-TGQALWPGRSDVDQLHLIRKTLG 717
>04591
Length = 1117
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 10/296 (3%)
Frame = -2
Query: 93 NIITLADIV---KDPVSR---TPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILK 142
N++ L +I P +R T L+FE+ + D L L + D + M ++L
Sbjct: 1038 NVVQLQEICHTQAGPYNRYKSTFYLIFEYCD-YDLAGLLNNLRVKFSLADKKNLMSQLLN 862
Query: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
L Y H+ I+HRD+K N+++ + L+L D+GL+ + + RV + +++ PEL
Sbjct: 861 GLFYIHTKQILHRDIKAANILLTRDG-VLKLADFGLSRPWVKSKRLTNRVVTLWYRPPEL 685
Query: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
L+ + Y +DMW +GC++A M RK P G QL I + G+ + +
Sbjct: 684 LLGEREYGPEIDMWGVGCIMAEMWSRK-PLMQGRSEQHQLSLITDLCGSLNAEVWPGVTK 508
Query: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
+EL + + G+ RK ER + L + E + +D LR D R+ A+ H
Sbjct: 507 LELYGKLDLPQGK-PRKVKERML----DLLKNKEGAELIDIFLRLDPGQRMNCDNALSHD 343
Query: 323 YFYTVVKDQARMSSTSMAGGSTPVSSANMMSGISSVPTPSPLGPLAGSPVIAAANS 378
+F+ P+ S ++ S +S++P LG + P NS
Sbjct: 342 FFWV-----------------DPLPSPSLTSILSNLPPMHELGVVRRPPARNPQNS 226
>32000
Length = 644
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Frame = -1
Query: 170 KLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
K+++ D+GLA F P + Y V + +++ PE+L+ + Y +D+WSLGC+ M+ R
Sbjct: 575 KMKIADFGLARVFGLPVRTYTHEVITLWYRAPEILLGCRFYSVPVDIWSLGCIFVEMMTR 396
Query: 229 KEPFFHGHDNYDQLVRIAKVLGTED--LYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
+ F G DQL RI + LGT D ++ + K P + + K E V
Sbjct: 395 RA-LFPGDSEIDQLYRIFRTLGTPDEKVWPGVSKL-----PDYKPTFPKWPLKNLETVVS 234
Query: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARMSSTSM 339
+S LD L ++L Y+ R++AR AM HPYF D RM+ T +
Sbjct: 233 ------LSKVGLDLLKRMLTYNPNRRISARSAMRHPYF----NDMKRMT*TDL 105
>04138
Length = 800
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = +1
Query: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG----QEYNVRVASRYFKG 199
L Y H I+HRD+K N++I + L+L D+GLA + Y RV + +++
Sbjct: 52 LYYIHRNKILHRDMKAANILITKQG-VLKLADFGLARAFSVNLRQPNRYTNRVVTLWYRP 228
Query: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDY 257
PELL+ + Y ++D W GC++A M + + P G +QL I ++ G T +++
Sbjct: 229 PELLLGDRNYSTAIDQWGAGCIMAEM-WTRNPIMQGTTEQNQLTLITQLCGSITPEVWPG 405
Query: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
+ + ++ + GR + R +RF + L P LD ++LL+ D R++A E
Sbjct: 406 VTQLSMYHQIKGALAAGRKNIIR-DRFA----RILKDPYGLDLFERLLKMDPSQRISADE 570
Query: 318 AMEHPYFYTVVKDQARMSSTS 338
A+ H +F+ V+ ++ + S
Sbjct: 571 ALNHDFFWVGVEPKSLVGVLS 633
>29581
Length = 1278
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 15/255 (5%)
Frame = -2
Query: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEI 140
L NLR NI+ L ++V + LV E+ D L + ++ ++ + ++
Sbjct: 1193 LLNLRHQ-NIVQLQEVVVGKSLDSLFLVMEYCEQ-DLASLLDNMPAPFSESQVKCIVLQL 1020
Query: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKG 199
LK L Y H I+HRD+K N+++ + +++ D+GLA Y P + +V + +++
Sbjct: 1019 LKGLRYLHEAFIIHRDLKVSNLLMT-DKGCVKIADFGLARNYGKPQKPMTPKVVTLWYRA 843
Query: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI- 258
PELL + + ++DMWS GC+L ++ K P G + Q+ I ++LGT + D I
Sbjct: 842 PELLFGSKTHSTAIDMWSAGCILGELLGHK-PLMPGRSDLQQIELIMELLGTPN--DTIW 672
Query: 259 ---------DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
+++ ++ P +N++ RH+ W +S + L+ L Y
Sbjct: 671 PGFSQLPAFEQFTLKKQP-YNNL--RHTFP-W-----------LSESGIRLLNGLFMYHP 537
Query: 310 QSRLTAREAMEHPYF 324
Q R TA + +EH YF
Sbjct: 536 QKRATAEDCLEHSYF 492
>01756
Length = 1858
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 19/264 (7%)
Frame = -3
Query: 7 SRARVYTDVNTHRPREYWDYESHVVEWGNQD-DYQLVRKLGRGKYSEVFEAINITNNEXX 65
SR R D + P YE+ + ++D Y+ + K+G+G + EVF+A +
Sbjct: 1820 SREREQKDSQRYSP-----YETLKFPFCDEDAKYEKLAKIGQGTFGEVFKARCKKTKQVV 1656
Query: 66 XXXXXXXXXXXXXXXXXXXLE----NLRGGPNIITLADIVKDPVSRTPA------LVFEH 115
E L N++ L +I + LVFE
Sbjct: 1655 AMKKVLMDNEKEGFPITALREIKILQLLNHENVVDLIEICSTKATSANRYKSMFYLVFEF 1476
Query: 116 VNNTDFKQLYQTLTDY----DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
+ D L ++ +I+ M +++ L Y H I+HRD+K N++I + L
Sbjct: 1475 CEH-DLAGLLSNMSVVFNLPEIKEVMKQLMNGLYYIHRNKILHRDMKAANILITKQG-VL 1302
Query: 172 RLIDWGLAEFYHPG----QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
+L D+GLA + Y RV + +++ PELL+ + Y ++D W GC++A M +
Sbjct: 1301 KLADFGLARAFSVNLRQPNRYTNRVVTLWYRPPELLLGDRNYSTAIDQWGAGCIMAEM-W 1125
Query: 228 RKEPFFHGHDNYDQLVRIAKVLGT 251
+ P G +QL I ++ G+
Sbjct: 1124 TRNPIMQGTTEQNQLTLITQLCGS 1053
>21079
Length = 878
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Frame = +1
Query: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQ---TLTDYDIRFYMYEILKALDYC 147
P ++ L D + P RT LV E V + F+++ + LT+ D ++ +I + Y
Sbjct: 4 PKLLMLWDAFEAP--RTMVLVMEFVGAGELFERVIRDDFVLTERDCVHFVRQICSGVGYM 177
Query: 148 HSMGIMHRDVKPHNVM-IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
H+ I+H D+KP NV+ + ++++ID+GLA FY PG V + F PE +V+Y
Sbjct: 178 HTQSILHLDLKPENVLCVSDNSNQIKIIDFGLARFYKPGDSLQVLFGTPEFIAPE-VVNY 354
Query: 207 QMYDYSLDMWSLG 219
+++ DMWS+G
Sbjct: 355 DEINFTTDMWSIG 393
>15910
Length = 1361
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Frame = +2
Query: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
T+ D + +IL + Y H+ G++HRD+KP N++ + + KL+L D+GL+ P
Sbjct: 458 TEKDAARAISDILHGVQYIHANGVVHRDLKPENLLYECMTDDSKLKLADFGLSRIIEPEV 637
Query: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
+ + + + PE+L + Y S+DMWS+G + ++ EPFF ++
Sbjct: 638 QMSTVCGTPGYCAPEVLKGDK-YTPSVDMWSVGVIAYILLCGYEPFFAENEF-------- 790
Query: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
++Y I K + D + W +S A D + KLL
Sbjct: 791 ------EMYRKIIKGEYKFDEEY-----------WSE---------ISENAKDVVRKLLV 892
Query: 307 YDHQSRLTAREAMEHPYFYTVVKDQARMSST 337
D + RLTA EA+ P+ V M T
Sbjct: 893 IDPKKRLTATEALRLPWVKGVATKTTNMEIT 985
>26560
Length = 398
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 63/106 (59%)
Frame = -1
Query: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
T+ ++RFY E++ L++ HS +++RD+KP N+++D E+ +R+ D GLA + +
Sbjct: 368 VFTEKEVRFYAAEVMLGLEHMHSRFVVYRDLKPANILLD-ENGHVRISDLGLACDFSKKR 192
Query: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
+ V + + PE+L+ Q YD S D +S GCML ++ PF
Sbjct: 191 PH-ASVGTHGYMAPEVLMKGQSYDSSADWFSFGCMLYKLLKGHSPF 57
>23319
Length = 2235
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +3
Query: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIE 264
+MY S+DMWS GC+ A + P F G+D+ DQL RI K+LG TED + + +
Sbjct: 21 KMYSTSIDMWSAGCIFAELANAGRPLFPGNDDDDQLKRIFKLLGTPTEDQWPGMTQL--- 191
Query: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
P + H W++ V N + D L LL R++A EA++HPYF
Sbjct: 192 --PNYRMFPMYHVTTTWQQVVPKLNS-----KGRDLLQCLLVCCPSDRMSADEALQHPYF 350
>00300
Length = 2318
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 18/226 (7%)
Frame = -1
Query: 39 YQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXLENLRGGPNIITLA 98
+Q K+G G++ +V+ A+N++ E L+ LR + I +
Sbjct: 1652 WQRGNKIGEGQFGKVYTAVNMSTGELMALKEMKFQPND--------LQQLREMCDEIKIF 1497
Query: 99 DIVKDP---------VSRTPALVF-EHVNNTDFKQLYQT-LTDYDIRFYMYEILKALDYC 147
+ ++ V + L+F E+ + ++ + L +Y IR Y EI+ A+++
Sbjct: 1496 EGIQHENLVKYYGVEVHKDEMLMFMEYCDTGTIEEAAKMGLPEYLIRRYTREIVLAVNHL 1317
Query: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL-----AEFYHPGQEYNVRVASRYFKGPEL 202
H I+HRD+K N+ + + ++L D+G + PG+ +N+ V + + PE+
Sbjct: 1316 HENSIVHRDIKGANIFLT-SNGHVKLGDFGCSVKLKSHTTMPGEFHNL-VGTTAYMAPEV 1143
Query: 203 LV--DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
D Y + D+WSLGC++ M K P+ +NY + ++
Sbjct: 1142 FTQNDQGGYGRAADIWSLGCVVIEMATGKRPWHDLDNNYQIMYKVG 1005
>13212
Length = 1067
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Frame = -1
Query: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGL-AE 180
L + +T+ I + +E+ ALD+ H ++HRD+K NV+ ID E ++L D+G+ A+
Sbjct: 1001 LEKPMTEAQICYVCHEMCMALDFLHRHHVIHRDIKAGNVLLTIDGE---VKLADFGVSAK 831
Query: 181 FYHPGQEYNVRVASRYFKGPELLVDYQM----YDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Q+ + + + Y+ PE+++ + YD+ D+WSLG L + P H
Sbjct: 830 NTQTQQKRDTFIGTPYWMAPEVVLCETLKDTPYDFKADIWSLGVTLIEFAQIEPPNKEMH 651
Query: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPE 296
L++I K +D K+W +
Sbjct: 650 -PMRVLIKIHK----------------------SDPPTLEKPKKWTKLFK---------- 570
Query: 297 ALDFLDKLLRYDHQSRLTAREAMEHPYF 324
DF+ K L D R TA E +EHP+
Sbjct: 569 --DFIAKCLVKDPNLRPTAAELLEHPFM 492
>12786
Length = 460
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 22/142 (15%)
Frame = -3
Query: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Q L I+FY E+L+A+ H+ G++H D+KP N M+ + L+LID+G+A
Sbjct: 425 QGLDRMMIKFYWREMLRAVKALHNEGVIHSDLKPANFMLVAGN--LKLIDFGIANTLQQD 252
Query: 186 QE---YNVRVASRYFKGPELLV-------DYQMYD--------YSL----DMWSLGCMLA 223
+ + RV + + PE ++ D M + Y + D+WSLGC+L
Sbjct: 251 KTSVLKDSRVGTPSYMSPEAIMAACDDSADDSMEEDGHRTKPKYKVGVRSDVWSLGCILY 72
Query: 224 SMIFRKEPFFHGHDNYDQLVRI 245
+M++ + PF H +N +L I
Sbjct: 71 NMVYGRTPFQHIKNNMGKLQAI 6
>12721
Length = 821
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +1
Query: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKG 199
LKAL + H+ G++HRD+K ++++ H+ K++L D+G A+ Q+ V + Y+
Sbjct: 403 LKALAFLHANGVIHRDIKSDSILLSHDG-KVKLXDFGFCAQVTQDLQKRKSLVGTPYWMA 579
Query: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
PE++ Y +D+WSLG M+ MI + PFF+
Sbjct: 580 PEVISRLP-YGPEVDIWSLGIMVMEMIDAEPPFFN 681
>01392
Length = 1806
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Frame = -1
Query: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYH-- 183
L + + + I +ALD+ HS GI HRD+KP N++ +H + +++ D+ LA
Sbjct: 1800 LCEREASLVVRHIARALDFLHSKGIAHRDLKPENILCEHLDDVVPVKICDFDLASGISCD 1621
Query: 184 ----PGQEYNVRVASRYFKGPEL----LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 235
E V S + PE+ + D YD D+WSLG +L M+ PF
Sbjct: 1620 GDGTKTPELLTPVGSAEYMAPEVVDAWVGDSFSYDKRCDLWSLGIILYIMLCGYPPF--- 1450
Query: 236 HDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Y Q E +D D FN I H + S+ +S
Sbjct: 1449 ---YGQCGEDCGWNRGEACHDCQDML-------FNSIQDGHYK------FPSQEWTSISS 1318
Query: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
A D + LL + + R +A + ++HP+ T
Sbjct: 1317 SAKDLIRHLLVREPRKRYSAADVLKHPWICT 1225
>30755
Length = 1137
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = +2
Query: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHP 184
+ T+ RFY EI+ AL Y HS GI++RD+K N+++D + +++ D+GL E
Sbjct: 17 RIFTEERTRFYGAEIISALGYLHSQGIIYRDLKLENLLLDKDGH-IKVADFGLCKEDITY 193
Query: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLV 243
G+ + + PE+L D Y ++D W G ++ MI + PF++ HD L+
Sbjct: 194 GRTTKTFCGTPEYLAPEVLDDND-YGRAVDWWGTGVVMYEMICGRLPFYNRDHDVLFTLI 370
Query: 244 RIAKV 248
+ V
Sbjct: 371 LVEDV 385
>28638
Length = 1458
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = -1
Query: 150 MGIMHRDVKPHNVMIDHEHRK-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
M I+H D+KP N+++ + R ++++D+G + GQ + SR+++ PE+L+
Sbjct: 774 MNIIHCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGVP- 604
Query: 209 YDYSLDMWSLGCMLASM 225
YD ++DMWSLGC+L M
Sbjct: 603 YDLAIDMWSLGCILVEM 553
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 32/141 (22%)
Frame = -2
Query: 216 WSLGCMLASMIFRK----EPFFHGHDNYDQLVRIAKVLG------------TEDLYDYI- 258
W L C ++ + + P F G + +DQ+++I +VLG T +D +
Sbjct: 596 WPLTCGXWAVYWWRCTXGNPLFAGSNEFDQMMKIVEVLGVPPRHILDQAQKTRKYFDLLP 417
Query: 259 ------------DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
KY + +++LG R + E H V+ + L F D +LR
Sbjct: 416 DGTYAPKKPRDNKKYKSPSSRKLHEVLGAEKGGPGGRRM-GEPGHTVA-DYLKFKDLILR 243
Query: 307 ---YDHQSRLTAREAMEHPYF 324
+D ++R++ A++H +F
Sbjct: 242 MLDFDPKTRISPYYALQHNFF 180
>01966
Length = 1735
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Frame = -1
Query: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDY 146
NI+ L D++ + LVFE ++ D K L ++ Y+++I+ +++
Sbjct: 1531 NIVCLEDVIME--DERLFLVFEFLS-MDLKMYIDKFPEGVVLDRRLVKSYVFQIVTGINF 1361
Query: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVD 205
CH I+HRD+KP N++I+H +++ D+G+A F P + Y V + +++ PE+L+
Sbjct: 1360 CHQRRIVHRDLKPQNLLINHTG-AIKIADFGMARTFALPVRAYTHEVVTLWYRAPEILMG 1184
Query: 206 YQMYDYSLDMWSLGCM 221
Q + W+ G +
Sbjct: 1183 PQ---STPPXWTCGAL 1145
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%)
Frame = -3
Query: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Y +D+WS+G + A M+ R P F G DQL +I +++GT + + + + P
Sbjct: 1175 YSTPVDVWSIGTIFADMLIRT-PIFKGDSEIDQLFKIFRIIGTPTEQTWPEFHKL---PA 1008
Query: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
FN + W+ SE + LD +++ L+ D R++ ++ ++H YF V
Sbjct: 1007 FNGMF-----PLWKEGKLSETLTDLDSLGLDLIERTLKCDPAQRISCKKMLQHAYFLNV 846
>14420
Length = 528
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-EYNVRVASRYF 197
E L+AL++ H ++HRD+K N+++ + ++L D+G P Q + + V + Y+
Sbjct: 221 ECLQALEFLHENQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQLSPEQSKRSTMVGTPYW 397
Query: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
PE++ Q Y ++D+WSLG M MI + P+ +
Sbjct: 398 MAPEVVTRKQ-YGPTVDIWSLGVMCIEMIEGEPPYLN 505
>27405
Length = 532
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Frame = -3
Query: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFK---QLYQTLTDYDIRFYMYEILKALDY 146
G P I+ + + P + + +N D + T+ ++RFY E++ L++
Sbjct: 380 GSPFIVCMTYAFQTP--EKLCFILDLMNGGDLHYHLSQHGVFTEKEVRFYAAEVMLGLEH 207
Query: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
HS +++RD+KP N+++D E+ +R+ D GLA + ++ + V + + PE+L+
Sbjct: 206 MHSRFVVYRDLKPANILLD-ENGHVRISDLGLACDFSK-KKPHASVGTHGYMAPEVLMKG 33
Query: 207 QMYDYSLD 214
Q YD S D
Sbjct: 32 QAYDSSAD 9
>18921
Length = 697
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHP 184
+TL + +I +Y LK L Y HS +HRD+K N+++++E +L D+G+A +
Sbjct: 302 KTLVEREIATILYYTLKGLXYLHSRRKIHRDIKAGNILLNNEGHA-KLADFGVAGQLTDT 478
Query: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
+ N + + Y+ PE++ + YD D+WSLG M K P
Sbjct: 479 MAKRNTVIGTPYWMAPEVIQEIG-YDCVADIWSLGITALEMAEGKPPVME 625
>18287
Length = 678
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Frame = -3
Query: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIEL 265
YDYS+D+WS+GC+ A ++ R+ F QL I ++GT ED+ +
Sbjct: 673 YDYSIDIWSVGCIFAELLSRRI-LFQAQGPVQQLDMIINLVGTPRPEDMERACEGAR--- 506
Query: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
N IL + R++ +++ + H + EA+ L ++L + ++R++A EA+ HPY
Sbjct: 505 ----NHILNQPFRRQNLLTLYNLSPH-ATHEAVRLLTRMLILNPKNRISAEEALSHPYL- 344
Query: 326 TVVKDQARMS-STSMAGGSTPVSSA--NMMSGISSVPTPSPLGPLAGSP 371
D+ R+ + M PV + P PL P P
Sbjct: 343 ----DEGRVRFHSCMCSCCKPVPGMGRQLCPDTQWEPCCPPLQPQLRQP 209
>31885
Length = 529
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Frame = -2
Query: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
++FY+ ++ LDY S I+HRD+KP N+++D E + D+ +A +
Sbjct: 366 VKFYLCQLALVLDYLRSQKIVHRDIKPDNILLD-EQGHCHVTDFNIATQLEDDELATSTS 190
Query: 193 ASRYFKGPEL----LVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
+R + PE+ + + + Y + +D WSLG L ++ ++ PF
Sbjct: 189 GTRPYMAPEVYGVAINERRGYGFPVDWWSLGVSLFELLKKRRPF 58
>03294
Length = 1684
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%)
Frame = -1
Query: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 270
+ +D+WS+G + A M+ R P F G DQL +I +++GT + + + + P FN
Sbjct: 1678 HPVDVWSIGTIFADMLIRT-PIFKGDSEIDQLFKIFRIIGTPTEQTWPEFHKL---PAFN 1511
Query: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
+ W+ SE + LD +++ L+ D R++ ++ ++H YF V
Sbjct: 1510 GMF-----PLWKEGKLSETLTDLDSLGLDLIERTLKCDPAQRISCKKMLQHAYFLNV 1355
>19761
Length = 473
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Frame = -3
Query: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN 189
I ++ + AL+Y H+ I+HRD+KP N+ + E +RL D GLA + P
Sbjct: 417 IVCWLMQTASALNYMHTHTPVILHRDLKPQNIYVT-EKGDVRLGDLGLARKLTGPADFAT 241
Query: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
+V + + PE+L Q Y+ D+WSLGC+ + +K G D + + +V+
Sbjct: 240 SQVGTIMYLSPEIL-SQQPYNSKSDIWSLGCVFYDITGKK-----GSDEMGVMFLLVQVM 79
Query: 250 GTEDL 254
G L
Sbjct: 78 GGRKL 64
>26711
Length = 405
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = -2
Query: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEH-RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
++L L + H+ G++H D+KP N+++ + ++LID+GLA +P QE + + F
Sbjct: 392 QVLDILQHVHAQGVVHMDLKPSNLLLSGDKLDSVQLIDFGLARKLYPPQETFLNHGTPGF 213
Query: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
PE L D + + D+W +G + ++ + PF
Sbjct: 212 TSPEAL-DVKPISTASDVWGVGVLAYILLSGQSPF 111
>18484
Length = 635
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Frame = +1
Query: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
FY EI L + H GI++RD+K NVM+D E +++ D+G+ + G +
Sbjct: 55 FYAAEIAVGLFFLHDQGIIYRDLKLDNVMLDSEGH-IKIADFGMCKEGMTGD-----ATT 216
Query: 195 RYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
R F G PE+++ YQ Y S+D W+ G +L M+ + PF
Sbjct: 217 RTFCGTPDYIAPEIVL-YQPYSKSVDWWAYGVLLFEMLAGQPPF 345
>09606
Length = 1300
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 25/222 (11%)
Frame = -3
Query: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE------- 180
L + IR + ++ L Y HS+GI+ D++P V++D L+ D+GL++
Sbjct: 842 LPETSIRDFGIHLVTGLHYIHSLGILFHDLRPSKVLLD-TSGVLKFADFGLSKVEGENLE 666
Query: 181 -----FYHPGQEYNVRVASRYFK-----------GPELLVDYQMYDYSL--DMWSLGCML 222
F G ++N++ A K PE+ +Q + S+ D+W+LGC+
Sbjct: 665 ELFFKFAEAGDQWNIQSAEEMMKQVPTSGSPTYMAPEV---FQGAEPSIMSDLWALGCVF 495
Query: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
M F P F G + YD + KVL E + + P
Sbjct: 494 YEM-FSGHPPFLG-ETYD--ITKDKVLNKEFPLPKVKGSRLSAKP--------------- 372
Query: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
SPE L+ L+ LL+ D RL+ ++H ++
Sbjct: 371 -----------SPEFLNLLESLLQKDSTRRLSWASLVKHAFW 279
>19094
Length = 898
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +1
Query: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHP 184
+TL + +I +Y LK L Y HS +HRD+K N+++++E +L D+G+A +
Sbjct: 43 KTLVEREIATILYYTLKGL*YLHSRRKIHRDIKAGNILLNNEGHA-KLADFGVAGQLTDT 219
Query: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
+ N + + Y+ PE++ + YD D+WSLG M
Sbjct: 220 MAKRNTVIGTPYWMAPEVIQEIG-YDCVADIWSLGITALEM 339
>13592
Length = 980
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 113/295 (38%), Gaps = 15/295 (5%)
Frame = +2
Query: 44 KLGRGKYSEVFEAINITNNEXXXXXXXXXX--XXXXXXXXXXXLENLRG--GPNIITLAD 99
K+G+G++ +V+ A+N E L+ L G N++
Sbjct: 5 KIGQGRFGKVYTAVNNNTGELMAMKEIAIQPGETRALKNVAEELKILEGIKHKNLVRYYG 184
Query: 100 IVKDPVSRTPALVFEHVNNT----DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHR 155
I V R L+F + + +L L + R + ++L + H GI+HR
Sbjct: 185 I---EVHREELLIFMELCSEGTLESLVELTGGLPEALSRRFTAQLLSGVAELHKHGIVHR 355
Query: 156 DVKPHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYD 210
D+K N+ + L+L D+G A PG E V ++ + PE+
Sbjct: 356 DIKTANIFLVDGSNSLKLGDFGSAVKIQAHTTVPG-ELQGYVGTQAYMAPEVFTKTNSDG 532
Query: 211 YS--LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
+ D+WS+GC++ M K P+ N+ + ++ +G + P+
Sbjct: 533 HGRLADIWSVGCVVVEMASGKRPWAQFDSNFQIMFKVG--MGEK--------------PQ 664
Query: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
+ L S E DF+D L++D + RL+A E +E +
Sbjct: 665 APESL--------------------SQEGHDFIDHCLQHDPKQRLSAIELLEQNF 769
>18401
Length = 463
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 75/143 (52%), Gaps = 10/143 (6%)
Frame = -3
Query: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
V++R+++ PE++++ + + D+WS+GC++ ++ F HDN + L + ++LG+
Sbjct: 449 VSTRHYRAPEVILELG-WSHPCDVWSVGCIMFE-LYTGYTLFQTHDNKEHLAMMERILGS 276
Query: 252 EDLYDYIDK-------YNIELDPRFNDILGRHSRKRWE---RFVHSENQHLVSPEALDFL 301
Y K ++ LD + R+ R+ + R+V + ++ + D +
Sbjct: 275 LP-YRMAKKTKKQKYFHHGRLDVPERSSMARYVRENTKPLLRYV-KDRENKDHQQLFDLM 102
Query: 302 DKLLRYDHQSRLTAREAMEHPYF 324
KLL Y+ SR + +A++HP+F
Sbjct: 101 KKLLAYEASSRYSLLQALQHPFF 33
>03240
Length = 1683
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 57/145 (39%), Gaps = 45/145 (31%)
Frame = -3
Query: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------------- 178
RFY+ E+++A++ H MG +HRD+KP N++ID ++L D+GL
Sbjct: 982 RFYVAELVQAIESVHRMGFIHRDIKPDNILIDRNGH-IKLTDFGLCTGFRWTHNSKYYQR 806
Query: 179 ---------------------AEFYHPGQEYNVR---------VASRYFKGPELLVDYQM 208
E P + R V + + PE+L
Sbjct: 805 DGTHARQDSMEVKCQLDEQCQCEILKPLERRRKREQRCLAHSLVGTPNYIAPEVLSRLGG 626
Query: 209 YDYSLDMWSLGCMLASMIFRKEPFF 233
Y D WS+G +L M+ PF+
Sbjct: 625 YTSVCDWWSVGVILFEMLVGHPPFY 551
>21433
Length = 590
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Frame = +2
Query: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Y+Y++ AL+YCH ++HRD+KP N+++ L++ D+G + + P +
Sbjct: 182 YIYQLSSALEYCHYRKVIHRDIKPENLLLG-LKGDLKIADFGWS-VHAPSSRRTTMCGTL 355
Query: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
+ PE +V+ + +D ++D+WSLG + + P
Sbjct: 356 DYLPPE-MVEGKTHDENVDLWSLGVLCYEFLVGTPPL 463
>13078
Length = 773
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Frame = -1
Query: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK-------YNIEL 265
D+WS+GC++ ++ F HDN + L + ++LG+ Y K Y+ L
Sbjct: 734 CDVWSIGCIMFE-LYTGYTLFQTHDNKEHLAMMERILGSLP-YRMAKKTKKQKYFYHGRL 561
Query: 266 DPRFNDILGRHSR---KRWERFV----HSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
D GR+ R K R+V + ++Q L D +DK+L Y+ +R + R+A
Sbjct: 560 DWDEKSSAGRYVRDNVKPLRRYVKDPDNEDHQQL-----FDLMDKMLSYEVSTRYSLRQA 396
Query: 319 MEHPYF 324
M HP+F
Sbjct: 395 MRHPFF 378
>31489
Length = 329
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Frame = +3
Query: 93 NIITLADIVKDPVS----RTPALVFEHVNNTDFKQLY--QTLTDYDIRFYMYEILKALDY 146
NII++ +I+K S + +VF+ + + + +Y Q LT+ IR+++Y+IL+ L Y
Sbjct: 33 NIISIREILKPKDSYHDFKDIHVVFDLMESDLHRIIYSDQPLTEEHIRYFLYQILRGLKY 212
Query: 147 CHSMGIMHRDVKPHNVM 163
HS ++HRD+KP N++
Sbjct: 213 IHSANVVHRDLKPSNLL 263
>04852
Length = 1462
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +1
Query: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Y ++I + +++ S +HRD+ NV++ EH L++ D+GL+ G Y R R
Sbjct: 340 YAFQIARGMEFLASRKCIHRDLAARNVLVTEEH-VLKIADFGLS---RTGDYYKKRSGGR 507
Query: 196 Y---FKGPELLVDYQMYDYSLDMWSLGCML 222
+ PE L D + Y D+WS G +L
Sbjct: 508 LPVKWMAPEALFDMR-YTTKSDVWSFGVVL 594
>13066
Length = 551
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +3
Query: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--AEFYHPGQEYNVR 191
+ + Y++ AL+Y HS + HRD+K N+++ H ++L D+G A G++Y R
Sbjct: 285 KIWFYQMTTALNYLHSYDVAHRDLKCENILLS-SHFNVKLADFGFACACITESGEKYMSR 461
Query: 192 --VASRYFKGPELLVDYQMYDYSLDMWSLG 219
S + PE++ D WSLG
Sbjct: 462 TYCGSAAYAAPEIVYGAPYAPKVADAWSLG 551
>07940
Length = 1336
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = -3
Query: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
+ + + LT D+ Y Y++ + ++Y S +HRD+ NV++ E+ L++ D+GL
Sbjct: 374 QDMLKMLTPKDLISYAYQVARGMEYLASKQCIHRDLAARNVLVAEEY-VLKIADFGLTRN 198
Query: 182 YHPGQEYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCML 222
Y R + PE L D + Y D+WS G +L
Sbjct: 197 LQQFDYYRKTTDGRLPVKWMAPEALFDRK-YTSKSDVWSYGVLL 69
>11185
Length = 473
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Frame = +1
Query: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE----------- 180
IR + ++ L Y HS+GI+ D++P V++D L+ D+GL++
Sbjct: 4 SIRDFGIHLVTGLHYIHSLGILFHDLRPSKVLLD-TSGVLKFADFGLSKVEGENLEELFF 180
Query: 181 -FYHPGQEYNVRVASRYFK-----------GPELLVDYQMYDYSL--DMWSLGCMLASMI 226
F G ++N++ A K PE+ +Q + S+ D+W+LGC+ M
Sbjct: 181 KFAEAGDQWNIQSAEEMMKQVPTSGSPTYMAPEV---FQGAEPSIMSDLWALGCVFYEMF 351
>00715
Length = 1788
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 27/149 (18%)
Frame = +1
Query: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNVMIDH 166
L E+V + + + +Q D +R + ++ + L Y HS+ I+H D+KP N ++
Sbjct: 166 LAMEYVGPLNLQTILNDHQQDIDSSMRLSLALQMARGLHYLHSINIVHLDLKPANCLLTR 345
Query: 167 EHRKLRLIDWGLAEFYHP-----------------------GQEYNVRVASRYFKGPELL 203
+ KLR+ D+G P G N + ++ PELL
Sbjct: 346 D-LKLRIADFGCCHQLTPTGLDMGEREGGMAGNELELTPVQGAWKNELAGTLAYRAPELL 522
Query: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Q S D++SLG L M R+ P+
Sbjct: 523 KGLQPSVRS-DVYSLGITLWQMCTRQGPY 606
>17975
Length = 449
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = +3
Query: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Y +I++A+ YCH + ++HRD+KP NV+ + ++L D+G +
Sbjct: 282 YFRQIVEAISYCHKLHVVHRDLKPENVVFFEKPGLVKLTDFGFS 413
>37602
Length = 804
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = -1
Query: 111 LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
+ E+ + +Y LT+ I F E LK L Y H G MHRD+K N+++ E
Sbjct: 288 IAMEYCGGGSMQDIYHVTGPLTEPQIAFVCRETLKGLHYLHRRGKMHRDIKGANILLTEE 109
Query: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
D LA+F+ ++ V + F
Sbjct: 108 G------DVKLADFWRVSSNHSHNVQKKVF 37
>14116
Length = 1017
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Frame = -1
Query: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-----EFYHPGQ 186
D+ Y +I + +DY + +HRD+ N M+D E +++ D+GLA + Y+ +
Sbjct: 318 DLIMYGVDIARGMDYLAGLKFVHRDLAARNCMLD-EDFHVKVADFGLARDIYEKEYYSSE 142
Query: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
++ ++ L + YD D+WS G +L ++ R
Sbjct: 141 NKKAKLPVKWMALESL--EKGNYDSKTDVWSYGVVLWELLTR 22
>01718
Length = 959
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 9/218 (4%)
Frame = +3
Query: 20 PREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXX 79
P+ H V + D + K+G G +SEVF+ + +
Sbjct: 96 PKSSCQALRHAVSALTRLDDFICEKIGAGFFSEVFKVTHRITGQVMALKMNTMTSNRHNM 275
Query: 80 XXXXXLENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTD---YDIRFY 136
L N NI+ + + AL E++ + + +QL + + + R
Sbjct: 276 LREVQLLNRLQHANILRFMGVCVHE-GQLHALT-EYIPSGNLEQLLEKKDEELPWTQRIQ 449
Query: 137 M-YEILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLA-EFYHP-GQEYNV 190
+ + + LDY HS +HRD+ N++I D+ + D+GLA + P +E
Sbjct: 450 LTLGLARGLDYLHSTRFIHRDLTSKNILIRREDNHGYHAVIADFGLATKIPDPLDKEKLP 629
Query: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
V S Y+ PE+L + Y+ D++S+G ++ + R
Sbjct: 630 TVGSPYWMAPEVL-NGHFYNERADLFSVGIIMCEITAR 740
>01106
Length = 878
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Frame = +3
Query: 20 PREYWDYESHVVEWGN--QDDYQLVRKLGRGKYSEV----------FEAINITNNEXXXX 67
PR+Y H V+ G+ Y ++RKLG G +S V F A+ + +
Sbjct: 261 PRDYCKGGYHPVKNGDLFNGRYHVIRKLGWGHFSTVWLCWDLTCKRFVALKVVKSAQHYT 440
Query: 68 XXXXXXXXXXXXXXXXXLENLRGGPNIITLADIVKDPVSRT-PALVFEHVNNTDFKQL-- 124
+ + + L D V+ T A+VFE + K +
Sbjct: 441 ETALDEVKLLKCVRESDVADPARAKCVQLLDDFKISGVNGTHVAMVFEVLGYNLLKLIIR 620
Query: 125 --YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI 164
YQ + ++++ + ++L+ L Y H+ I+H D+KP N++I
Sbjct: 621 SNYQGIPIHNVKLIIRQVLEGLSYMHAKCRIIHTDIKPENILI 749
>26009
Length = 886
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
+ + M +++ ALD+ HS ++HRD+KP NV+I
Sbjct: 714 EAKSVMKQLVSALDFMHSKQLVHRDIKPENVLI 812
>05084
Length = 1324
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +2
Query: 235 GHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHL 292
G DQLV I KVLGT + I E++P +++ + W +
Sbjct: 8 GDSGVDQLVEIIKVLGTP------TREQIREMNPNYSEFKFPQIKAHPWTKVFRPRT--- 160
Query: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
PEA+ + +LL Y +R+ EA H +F + +R+
Sbjct: 161 -PPEAIQLVSRLLEYTPSARIQPMEACAHAFFDELRDPASRL 283
>06358
Length = 1517
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Frame = +3
Query: 123 QLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-- 179
Q YQ L D +I+ + ++ +AL + H+ +MHR+V P +M+ +L W LA
Sbjct: 339 QDYQ-LYDVEIKHGLLQVTEALGFLHNDAKMMHRNVCPEAIMLT------KLGSWKLAGY 497
Query: 180 EFY------------HPGQEYNVRVASRY-----FKGPELLVDYQMYDYSLDMWSLGCML 222
EF +P E+ +A F PE ++ Q S DM+SLG ++
Sbjct: 498 EFCVRSSDPQSTDPSYPFYEWRSDIAPVTQPHLDFMAPEYVLTMQCGTGS-DMFSLGLLV 674
Query: 223 ASMIFRKEPFFHGH-------DNYDQL--VRIAKVLGT--EDLYDYIDKYNIELDP 267
S+ + +P F + N ++L +R++ +LG EDL D++ K + ++P
Sbjct: 675 YSVFAKGKPLFECNGELSAFKSNAEELRHMRVS-LLGVVPEDLRDHV-KLLLNIEP 836
>00392
Length = 668
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +3
Query: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
++ + ++LK L + H+ ++HRD+K N+ I +++ D GLA + +V
Sbjct: 252 LKNWCRQVLKGLYFLHTRTPPVIHRDLKCDNIFITGPTGSVKIGDLGLATLKNQSFAKSV 431
Query: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLG-CML 222
+ + F PE+ ++ YD ++D+++ G CML
Sbjct: 432 -IGTPEFMAPEMYEEH--YDEAVDVYAFGMCML 521
>21800
Length = 855
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Frame = +2
Query: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMI 164
+VFE + K + YQ + ++++ + ++L+ L+Y H+ I+H D+KP N++I
Sbjct: 557 CMVFEVLGYNLLKLIIRSNYQGIPVHNVKLIIRQVLEGLNYLHAKCNIIHTDIKPENILI 736
Query: 165 ---DHEHRKLRL--IDWGLAEFYHPG 185
D+ RKL + +W PG
Sbjct: 737 CVDDNYIRKLAVDAFEWQRLGLKLPG 814
>32359
Length = 928
Score = 28.5 bits (62), Expect(2) = 0.020, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3
Query: 151 GIMHRDVKPHNVMIDHE 167
G+ HRD+KP N+++D E
Sbjct: 65 GVCHRDIKPQNLLLDPE 15
Score = 26.6 bits (57), Expect(2) = 0.020, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = -1
Query: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIM 153
LV E+V T ++ + QT+ I+ YMY++ ++L Y HS +
Sbjct: 202 LVLEYVPETVYRVARHYSKSKQTIPILYIKLYMYQLFRSLAYIHSQACV 56
>27546
Length = 426
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = -1
Query: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
+ + +++ KAL Y HS I HRD+K N+++ + +++ D+G A +
Sbjct: 171 KVWFFQMAKALQYLHSHDIAHRDLKCENILLS-KRLNVKIADFGFARY 31
>02638
Length = 1490
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%)
Frame = +1
Query: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
F PE+L + Y + D+WS+GC++ M + P ++ HD + L I K+ +
Sbjct: 34 FMAPEVLRG-ESYGRACDVWSVGCVMIEMCTCRPP-WNSHDISNHLALIFKIASS----- 192
Query: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
+D I EN +SP D + + L D R +A+
Sbjct: 193 -VDPPPI-----------------------PEN---MSPPVRDLMLRCLEQDSDFRPSAK 291
Query: 317 EAMEHPYF 324
+ + HP F
Sbjct: 292 DLLMHPLF 315
>18481
Length = 437
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = -1
Query: 139 EILKALDYCHSMGIMHRDVKPHNVMID---HEHRKLRLIDWGLAEFYHPGQ 186
++L L++ H +HRD+KP N ++ H HR L +ID+GL++ Y Q
Sbjct: 173 QLLSRLEFIHQKCFIHRDLKPDNFLMGLGRHCHR-LYIIDFGLSKRYKDTQ 24
>28157
Length = 400
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Frame = +3
Query: 92 PNIITLADIVKD-PVSRTPALVFEHVNNTDFKQLYQTL---------TDYDIRFYMYEIL 141
PNI+ L +D PV LV E+ LY L T ++ +
Sbjct: 90 PNIVCLYGACRDHPV----CLVMEYAEGGS---LYNVLHGSGPQPQYTAAHAMNWLLQCA 248
Query: 142 KALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
++Y H M ++HRD+KP N+++ KL++ D+G A H
Sbjct: 249 LGVEYLHGMKPKALIHRDLKPPNLLLIQCGTKLKICDFGTACDIH 383
>29360
Length = 363
Score = 34.3 bits (77), Expect = 0.079, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 14/66 (21%)
Frame = +3
Query: 113 FEHVNNT--DFKQLYQTLTDY------------DIRFYMYEILKALDYCHSMGIMHRDVK 158
F+H N+T F+ L Q L D+ IR ++L AL +G++H D+K
Sbjct: 162 FQHKNHTCLVFEMLEQNLYDFLKQNKFQPLPLKYIRPITQQVLTALRKLKQLGLIHADLK 341
Query: 159 PHNVMI 164
P N+M+
Sbjct: 342 PENIML 359
>15931
Length = 447
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYF 324
+ D +DK+L Y+ +R + R+AM HP+F
Sbjct: 70 QLFDLMDKMLSYEVSTRYSLRQAMRHPFF 156
>19301
Length = 712
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Frame = +2
Query: 85 LENLR--GGPNIITLADIVKDPVSRTPA--LVFEHVNNTDFKQLYQTLTDYD------IR 134
+ NLR PNII+ + ++ P ++ E+ + QLY+ L D +
Sbjct: 422 IRNLRKLNHPNIISFKGVC----TQAPCYCIIMEYC---PYGQLYEVLRDGKEIPPALVL 580
Query: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
+ +I ++Y HS I+HRD+K NV++ ++ +++ D+G +
Sbjct: 581 DWSKQIASGMNYLHSHKIIHRDLKSPNVLV-AKNDVVKISDFGTS 712
>11801
Length = 743
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = -1
Query: 226 IFRKEPFFHGHDNYDQLVR---IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
+ +K P YDQL R +AKV+ + D++ I+LDP+++ + ++S +
Sbjct: 272 LLKKFPVTSSSIPYDQLQRRCSVAKVVSETSCCKFGDQF-IKLDPQYDYRVAKYSYLQSY 96
Query: 283 RFVHSENQHLVSPEALDFLDKL 304
R+ QH+ +AL F D +
Sbjct: 95 RYFDDHKQHIR--QALMFNDTI 36
>26909
Length = 394
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 10/109 (9%)
Frame = +2
Query: 226 IFRKEPFFHGHD---------NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH 276
+ EP FH ++DQL RI V+G D+ D + + R
Sbjct: 14 LLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQEKDWEDIRRMPEHQQLTKDFKRS 193
Query: 277 SRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
S + E + +A L KLL D R+T+ +AM+ PYF
Sbjct: 194 SYVNCNLMKYMEKHKVKADSKAFHLLQKLLTMDPVKRITSEQAMKDPYF 340
>29590
Length = 320
Score = 32.7 bits (73), Expect = 0.24, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 175 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
D G A + G++ + + + PE+L DY+ DMWSLG + M+ PF
Sbjct: 6 DLGFACLTNTGEDIRDIIGTPDYVAPEVL-DYEPLSIQTDMWSLGVLSYVMLTACSPF 176
>14104
Length = 573
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
+P+A+ F+ L+ D RLT + ++HPY
Sbjct: 88 AAPQAMSFMQSCLKMDPAERLTCHQLLQHPYM 183
>12672
Length = 773
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +3
Query: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG-----QEYNVRVASRYF 197
+ Y + G +HRD+K N+++D E+ ++ D+ G Q +V + + +
Sbjct: 27 GIQYLNDNGHVHRDIKTANILLDSEYTA-KVGDFATVVSAPSGEGKTVQNASVVIGTAAY 203
Query: 198 KGPELLVDYQMYDYS--LDMWSLGCMLASMI 226
PE + +D S LD +S G +L +I
Sbjct: 204 LAPEAI----HFDVSTKLDSYSFGVVLLEVI 284
>27274
Length = 396
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 50/126 (39%)
Frame = -1
Query: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
G ELL Q + ++DMWSLG +L ++ PF Q+ R +
Sbjct: 381 GAELLRG-QQHGPTVDMWSLGILLHELLSGHVPF-EPERGSRQMARNMMAV--------- 235
Query: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
+ I+ SR + +S DFL +L++ + RLT+++A
Sbjct: 234 ----------YAQIIRGSSRDVCDGLA-------LSTHGADFLRRLVQLEDTKRLTSQQA 106
Query: 319 MEHPYF 324
HP+
Sbjct: 105 FSHPWI 88
>35032
Length = 465
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 299 DFLDKLLRYDHQSRLTAREAMEHPYFY 325
D + +LL YD RLT A+ HP+ Y
Sbjct: 147 DLVKRLLNYDPSKRLTPXXALAHPFLY 227
>37063
Length = 455
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
Frame = -2
Query: 157 VKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQ------EYNVRVASRYFKGPELLVDYQM 208
+KP N++ +H E L++ D+ LA + E V S + PE+ VD +
Sbjct: 454 LKPENILCEHLDEVVPLKICDFDLASGINCDGDGTKTPELLTPVGSAEYMAPEV-VDAWV 278
Query: 209 -----YDYSLDMWSLGCML 222
YD DMWSLG +L
Sbjct: 277 GESFSYDKRCDMWSLGIIL 221
>17932
Length = 597
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -3
Query: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
VS EA D + +LL D +SRL E +HP+F TV
Sbjct: 460 VSKEARDLISQLLS-DGKSRLGWPELQQHPFFKTV 359
>16350
Length = 1108
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 299 DFLDKLLRYDHQSRLTAREAMEHPYF 324
DFL +L +D + R TA ++++HP+
Sbjct: 762 DFLAPMLEFDPEQRATAAQSLQHPWL 839
>20513
Length = 405
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 299 DFLDKLLRYDHQSRLTAREAMEHPYF 324
DFL +L +D + R TA ++++HP+
Sbjct: 282 DFLAPMLEFDPEQRATAAQSLQHPWL 205
>18663
Length = 600
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
PE+L + Y +S+D W+LG +L M+ + PF
Sbjct: 32 APEILRG-EDYGFSVDWWALGVLLYEMLAGRSPF 130
>20773
Length = 391
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 274 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
G H R+ F H+ +V+ + + +LL YD RLT A+ HP+
Sbjct: 370 GLHRRRSRPVFPHTT---VVTQHFYNLVQRLLTYDPSQRLTPDLALSHPF 230
>28419
Length = 687
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 140 ILKALDYCHSMG----IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
ILK L YC ++ ++ K N+ EH K++ + G + +R S+
Sbjct: 342 ILKRLRYCLNLSKPPSYLNTVRKL*NISYVREHDKVKALMLGFKLLVNSQCANALRHPSQ 521
Query: 196 YFKGPELL-VDYQMYDY 211
KGPEL+ D+Q Y++
Sbjct: 522 I*KGPELIPYDFQFYEF 572
>20152
Length = 445
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
PE+L+ ++D+WSLG +L ++ + PF +D+
Sbjct: 1 PEILLGDSYDAPAVDVWSLGVILYMLVVGEAPFQEANDS 117
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981273|ref|NP_075638.2| CNDP dipeptidase 2 [Mus
musculus]
(475 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
33994 360 e-113
>33994
Length = 933
Score = 360 bits (925), Expect(2) = e-113, Method: Compositional matrix adjust.
Identities = 169/240 (70%), Positives = 203/240 (84%)
Frame = +1
Query: 234 GSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGA 293
G+VHEAM D+I+LM LVD KGKIL+PG+ D+V P+TDEE ALYD I+FDM ++ KD+GA
Sbjct: 94 GTVHEAMGDVIALMNSLVDVKGKILVPGVCDSVKPLTDEEKALYDPIEFDMGDYQKDIGA 273
Query: 294 ETLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVV 353
+ L+H K+D+LMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKV+GKFSIRLVPD P +
Sbjct: 274 KKLIHDKKEDVLMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVIGKFSIRLVPDQEPSEI 453
Query: 354 SEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTR 413
+ V ++ K AE SPNK + MGHGG+PWVSDFNHP+Y AGR A+K VF +EPDLTR
Sbjct: 454 EKHVRQHVEKVHAERGSPNKITLSMGHGGRPWVSDFNHPNYMAGRAAMKRVFKMEPDLTR 633
Query: 414 EGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQL 473
EGGSIPVTLTFQEATGKNVMLLP+GS DDGAHSQNEK+NR NYI+G K+LAAY+ E++++
Sbjct: 634 EGGSIPVTLTFQEATGKNVMLLPIGSCDDGAHSQNEKINRSNYIQGVKLLAAYMEELAKV 813
Score = 65.5 bits (158), Expect(2) = e-113, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +2
Query: 203 KPCITYGLRGICYFFIEVECSDKDLHSGVYG 233
KPCITYGLRGICYFF+EVEC+D DLHSGV+G
Sbjct: 2 KPCITYGLRGICYFFLEVECADMDLHSGVFG 94
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|62234487|ref|NP_080758.1| plasma membrane calcium
ATPase 1 [Mus musculus]
(1220 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12151 277 e-113
06342 234 2e-61
29829 222 9e-58
00499 212 6e-55
35407 146 6e-35
21541 138 2e-32
36566 127 2e-29
08160 65 1e-10
14773 62 2e-09
28890 54 3e-07
04985 52 2e-06
13525 43 8e-04
33697 39 0.010
14321 39 0.016
07486 38 0.021
21117 30 4.5
>12151
Length = 880
Score = 277 bits (708), Expect(2) = e-113, Method: Compositional matrix adjust.
Identities = 146/198 (73%), Positives = 166/198 (83%), Gaps = 4/198 (2%)
Frame = +3
Query: 806 KKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVV 865
+KADVGFAMGI+GTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSI+KFLQFQLTVNVV
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 866 AVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLIS 925
AV VAF GAC DSPLKA+QMLWVNLIMDTLASLALATE P+ LL R+PYGR KPLIS
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPYGRTKPLIS 647
Query: 926 RTMMKNILGHAFYQLVVVFTLLFAGEK-FFDID---SGRNAPLHAPPSEHYTIVFNTFVL 981
+TM KNILGHAFYQ++V+ LLF G K +D + R P P ++H+TI+FN FV+
Sbjct: 648 KTMWKNILGHAFYQILVILLLLFQGAKAVWDRRWHPTSRETP--RPTNQHFTIIFNAFVM 821
Query: 982 MQLFNEINARKIHGERNV 999
M LFNE+NARKIH +RN+
Sbjct: 822 MTLFNEVNARKIHDQRNI 875
Score = 152 bits (383), Expect(2) = e-113, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 85/98 (86%)
Frame = +1
Query: 710 DNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSS 769
DN+NTAR+IA+KCGI+ PG+D L LEGK+FN+ IR+ +GEI QE++D++WP LRVLARSS
Sbjct: 1 DNVNTARSIASKCGIIQPGDDGLVLEGKEFNQLIRDAEGEISQEKVDEVWPNLRVLARSS 180
Query: 770 PTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKK 807
P DK+ LVK IIDS VS R+VVAVTGDGTNDGPALKK
Sbjct: 181 PQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPALKK 294
>06342
Length = 2428
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 302/624 (48%), Gaps = 54/624 (8%)
Frame = +2
Query: 356 KKEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFV-IDTFWVQKRPWLAECTPIYIQ 414
++EK+ LQ KL + + Q+ K IT+I + ++ + I F P +I+
Sbjct: 299 EQEKTPLQQKLDEFSNQLSKV------ITIICIAVWAINIGHF---NDPAHGGS---WIK 442
Query: 415 YFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICS 474
+ +F I V + V A+PEGLP +T LA ++M K N +VR L + ET+G + ICS
Sbjct: 443 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS 622
Query: 475 DKTGTLTMNRMTVVQAYI-----------------------------NEKHYKKVPEPEA 505
DKTGTLT N+M+V + +I N K K P
Sbjct: 623 DKTGTLTTNQMSVCKLFIFSQIDTNQIKTTQFEVTGSTYAPDGELYQNGKKVKASDYPGL 802
Query: 506 IPPNILSYLVTGISVNCAYTSKILPPEKEGGLPRHVGNKTECALLGFLLDL--------- 556
+ + SV+ Y EK VG TE AL L
Sbjct: 803 EELCTICGMCNDSSVD--YNEAKTQYEK-------VGEATETALTVLAEKLNFYNTDKSS 955
Query: 557 --KRDYQDVRNEIPEEALYKVYT--FNSVRKSMSTVL-----KNSDGSFRIFSKGASEII 607
KR+ V N + ++ K +T F+ RKSMS G R+F+KGA E +
Sbjct: 956 LNKREMGTVCNHVIQDMWRKEFTLEFSRDRKSMSVFCVPNKPTRVPGGARMFAKGAPEGL 1135
Query: 608 LKKCFKILSANGEAKVFRPRDRDDIVK-TVIEPMASEGLRTICLAFRDFPAGEPEPEWDN 666
L +C + N + + P +++I+K T I + LR + LA D P + + ++
Sbjct: 1136LDRCTHVRIGNNKVPM-SPAIKNEIMKLTKIYGTGRDTLRCLALATIDNPPRREDMDLED 1312
Query: 667 ENDVV---TGLTCIAVVGIEDPVRPEVPEAIKKCQRAGITVRMVTGDNINTARAIATKCG 723
+ T +T + VVG+ DP R EV +IK C+ AGI V ++TGDN TA AI + G
Sbjct: 1313SRKFIEYETNMTFVGVVGMLDPPREEVMASIKNCRAAGIRVIVITGDNKATAEAICRRIG 1492
Query: 724 ILHPGEDF--LCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGII 781
+ E+ L G++F+ E+ E + R+ AR P K +V+
Sbjct: 1493VFSESENTEGLAYTGREFD--------ELPPEDQRAAVMRARLFARVEPAHKSKIVE--- 1639
Query: 782 DSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKA 841
+ + ++ A+TGDG ND PALKKA++G AMG +GT VAK AS+++L DDNF++IV A
Sbjct: 1640--YLQAEGEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSTIVAA 1810
Query: 842 VMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLA 901
V GR +Y+++ +F+++ ++ N+ V+ F A + L VQ+LWVNL+ D + A
Sbjct: 1811VEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGIPEALIPVQLLWVNLVTDGFPATA 1990
Query: 902 LATEPPTESLLLRKPYGRNKPLIS 925
L PP ++ + P + LI+
Sbjct: 1991LGFNPPDLDIMQKPPRNPREGLIT 2062
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Frame = +2
Query: 213 GDIAQVKYGDLLPAD-GIL-IQGNDLKIDESSLTGES-----------DHVXXXXXXXXX 259
GDI +V GD +PAD IL I L+ID++ LTGES D
Sbjct: 14 GDIVEVSVGDKVPADIRILKIHSTTLRIDQAILTGESVSVMKHTDPIPDPRAVNQDKKNL 193
Query: 260 XXXGTHVMEGSGRMVVTAVGVNSQTGII 287
GT+V G + +V G+ ++ G I
Sbjct: 194 LFSGTNVAAGKCKGLVIGTGLTTEIGKI 277
>29829
Length = 465
Score = 222 bits (565), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 115/150 (76%), Positives = 128/150 (85%)
Frame = -3
Query: 810 VGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIV 869
+GFAMGI+GTDVAKEASDIILTDDNFTSIVKAV WGRNVYDSI+KFLQFQLTVNVVAV V
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 870 AFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMM 929
AF GAC DSPL+A+QMLWVNLIMDTLASLALATE P+ LL RKPYGR KPLIS+TM
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYGRTKPLISKTMF 101
Query: 930 KNILGHAFYQLVVVFTLLFAGEKFFDIDSG 959
KNI GH+ YQ++++ +LF G F ID G
Sbjct: 100 KNIAGHSVYQIIIILVILFKGADLFGIDDG 11
>00499
Length = 4026
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 276/554 (49%), Gaps = 44/554 (7%)
Frame = +2
Query: 434 GLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIN 493
GL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMTV + +
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 181
Query: 494 EKHYKKVPEPEAI-------PPNILSYLVTGISVNCAYTSKILPPEKEGGLPRHV-GNKT 545
+ + + P ++ ++ +++ C + L R G+ +
Sbjct: 182 GRIVEADTSDDQSNATYSRSDPTWMA--LSRVAMLCNRAEFKGNQDNVPILKRECNGDAS 355
Query: 546 ECALL-------GFLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGS--- 595
E ALL G + + +R + + EIP FNS K ++ + D
Sbjct: 356 ESALLKCVELSIGHVTEYRRRNEKIV-EIP---------FNSSNKYQVSIHETEDPDDPR 505
Query: 596 FRIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDF 655
+ + KGA E I+ +C IL NG+ + R+ +E GL L F D+
Sbjct: 506 YLLVMKGAPERIMDRCSTIL-LNGKEQPLDDNFREAFNAAYLE---LGGLGERVLGFCDY 673
Query: 656 --------PAGEPEPEWDNENDVVTGLTCIAVVGIEDPVRPEVPEAIKKCQRAGITVRMV 707
P E +PE N +TGL + ++ + DP R VP+A+ KC+ AGI V MV
Sbjct: 674 FLPVDQFPPGYEFDPE--GPNFPITGLRFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMV 847
Query: 708 TGDNINTARAIATKCGILHPG----EDFLCLEGKDFNRRIRNEK-------GEIEQERID 756
TGD+ TA+AIA GI+ G ED G E G++
Sbjct: 848 TGDHPITAKAIARGVGIISEGSKTVEDIASERGIPVEEVDPREAKAAVIHGGDLRDMTPA 1027
Query: 757 KIWPKLR-----VLARSSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVG 811
+I LR V AR+SP K +V+G Q Q+VAVTGDG ND PALKKAD+G
Sbjct: 1028QIDEILRNHSEIVFARTSPQQKLIIVEG-----CQRQGQIVAVTGDGVNDSPALKKADIG 1192
Query: 812 FAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNV--VAVIV 869
AMGIAG+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+ ++ +
Sbjct: 1193VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFL 1372
Query: 870 AFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMM 929
F A I PL + +L ++L D + +++LA E ++ R+P P+ + +
Sbjct: 1373LFILADIPL--PLGTITILCIDLGTDMVPAISLAYEKAENDIMKRQP---RDPVKDKLVN 1537
Query: 930 KNILGHAFYQLVVV 943
+ ++ A+ Q+ ++
Sbjct: 1538ERLISMAYGQIGMI 1579
>35407
Length = 562
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 111/179 (62%), Gaps = 8/179 (4%)
Frame = +1
Query: 47 RKIQESYGDVY---GICTKLKTSPNEGLSGNPADLERREAVFGKNFIPPKKPKTFLQLVW 103
R +Q V+ G KLKTSP EGL G+ E R +G N IPPK PK+FL+LVW
Sbjct: 37 RGLQHHRHQVWRRPGNVQKLKTSPTEGLVGDLGK-EERVRFYGSNVIPPKPPKSFLRLVW 213
Query: 104 EALQDVTLIILEIAAIVSLGLSFYQPPEGDNALCXXXXXXXXXXXXXXXXXXXAAI---- 159
EALQDVTL+IL +AAI+SLGLSFY+ GD I
Sbjct: 214 EALQDVTLLILIVAAIISLGLSFYK---GDEEEDETEDESYRAKADSSLEEKVGWIDGLA 384
Query: 160 -LLSVVCVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRGGQVIQIPVADITVGDIAQ 217
L++V VVLVTAFNDWSKEKQFRGLQS+IE E +FTVIR G++ QIPV DI VG+I Q
Sbjct: 385 ILVAVAVVVLVTAFNDWSKEKQFRGLQSKIEHEHRFTVIRDGELHQIPVGDILVGEICQ 561
>21541
Length = 445
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 83/124 (66%)
Frame = +3
Query: 170 TAFNDWSKEKQFRGLQSRIEQEQKFTVIRGGQVIQIPVADITVGDIAQVKYGDLLPADGI 229
TAFNDWSKEKQFRGLQS+IE E +FTVIR G++ QIPV +I VG+I Q+KYGDLLPADG+
Sbjct: 54 TAFNDWSKEKQFRGLQSKIEHEHRFTVIRNGELHQIPVGEILVGEICQIKYGDLLPADGV 233
Query: 230 LIQGNDLKIDESSLTGESDHVXXXXXXXXXXXXGTHVMEGSGRMVVTAVGVNSQTGIIFT 289
+IQ NDLK + G +MVVTAVGVNSQTGIIF
Sbjct: 234 IIQSNDLKNRREFVNRRVGPCEKGRGQGPHAFVRHPCNGGQWKMVVTAVGVNSQTGIIFA 413
Query: 290 LLGA 293
LLGA
Sbjct: 414 LLGA 425
>36566
Length = 589
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 98/147 (66%)
Frame = +3
Query: 791 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 850
VV +TGDG ND ALK A++G +MG++GTDV+KEASD+IL DD+FT+I+ A+ G+ ++
Sbjct: 126 VVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDDFTTILNAIEEGKGIFY 305
Query: 851 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTES 910
+I F++FQL+ ++ A+ + + +PL A+Q+LW+N+IMD + +L EP
Sbjct: 306 NIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIMDGPPAQSLGVEPVDHD 485
Query: 911 LLLRKPYGRNKPLISRTMMKNILGHAF 937
++ + P P+I+R ++ N+L A
Sbjct: 486 VIKQPPRHVGDPIITRRLIINVLSSAL 566
>08160
Length = 459
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +2
Query: 434 GLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIN 493
GL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMTV + +
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 181
>14773
Length = 794
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Frame = +2
Query: 819 TDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQ 878
+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+ +
Sbjct: 2 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGT 181
Query: 879 DSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGH--- 935
PL + +L+++L D + +++LA E ++ R P + L++ ++ G
Sbjct: 182 PLPLGVITILFIDLGTDMVPAISLAYEMAESDIMKRPPRTISDRLVNERLIAMSYGQIGM 361
Query: 936 -----AFYQLVVVF 944
FY ++VF
Sbjct: 362 MQALAGFYAWILVF 403
>28890
Length = 552
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = -3
Query: 192 QKFTVIRGGQVIQIPVADITVGDIAQVKYGDLLPADGILIQGNDLKIDESSLTGESD 248
Q V+RG Q + + ++ VGDI + K+GD +PAD +I + K+D SSLTGES+
Sbjct: 475 QFAVVVRGDQKLSVKAEELVVGDIVECKFGDRVPADLRVISAHGFKVDNSSLTGESE 305
>04985
Length = 1671
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Frame = -1
Query: 753 ERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGF 812
E + K+ + V AR +P K L++ + +V + GDG ND ALK A G
Sbjct: 1641 ELLPKVCTQGTVFARMAPDQKCALIENL-----QSYDYIVGMCGDGANDCEALKAAHAGI 1477
Query: 813 AMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV---------YDSISKFLQFQLTVN 863
++ A VA + I +N +V A+ GR Y ++ F+QF
Sbjct: 1476 SLSEAEASVAAPFTSRI---NNIECVVTAMREGRAALVTSFGCFKYMALYSFIQF----- 1321
Query: 864 VVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPL 923
++V++ +T C T S L + L+++LI+ T ++ L + L+ R+KP
Sbjct: 1320 -ISVLILYT--CQTNLSDL---EFLYIDLIITTTIAVLLGYTGAYDKLV------RHKPP 1177
Query: 924 ISRTMMKNILG-------HAFYQLVVVFTL 946
S + NI+ A YQL +F L
Sbjct: 1176 DSLMKLSNIISILMQVTLTAAYQLSTLFYL 1087
>13525
Length = 645
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 446 SVKKMMKDNNLVRHLDACETMGNATAICSDKTG 478
+ K+M + N LV++L+A ET+G+ + ICSDKTG
Sbjct: 5 TAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 103
>33697
Length = 310
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -2
Query: 684 DPVRPEVPEAIKKCQRAGITVRMVTGDNINTARA 717
DP R VP+A+ KC+ AGI V MVTGD+ T++
Sbjct: 195 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITSQG 94
>14321
Length = 568
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 758 IWPKLRVLARSSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAM 814
+ P RV AR +P K ++ + + Q V + GDGTND ALK ADVG A+
Sbjct: 248 LLPNTRVFARVAPKQKELII-----TVLKAQGFVTLMCGDGTNDVGALKHADVGVAL 403
>07486
Length = 763
Score = 38.1 bits (87), Expect = 0.021, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 804 ALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGR 846
AL +ADVG A+G GTDVA EA+DI+L + + A+ R
Sbjct: 742 ALAQADVGIAIG-TGTDVAVEAADIVLMKSDLVDVYAAIKLSR 617
>21117
Length = 462
Score = 30.4 bits (67), Expect = 4.5, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = -3
Query: 170 TAFNDWSKEKQFRGLQSRIEQEQKFTVIRGGQVIQIPVADITVGDIAQVKYGDLLPADGI 229
TA + S L+SR + R G+ D VGD V GDL G+
Sbjct: 382 TASANCSTSTSILALRSRTRHSLSPVLKRDGET------DRLVGDRDLVGDGDLNGETGL 221
Query: 230 LIQGNDLKIDESSLTGESDHV 250
L+ NDL D L G++D V
Sbjct: 220 LLGDNDLDGDAGLLVGDNDLV 158
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6754012|ref|NP_034438.1| guanine nucleotide binding
protein, alpha o isoform A [Mus musculus]
(354 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11965 404 e-113
13527 335 1e-92
29196 154 6e-38
20516 108 3e-24
34094 69 4e-12
08153 47 8e-06
09827 47 1e-05
10862 43 2e-04
18949 40 0.002
11378 36 0.021
18208 32 0.33
>11965
Length = 3256
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 186/221 (84%), Positives = 201/221 (90%)
Frame = +1
Query: 134 DSGIQECFNRSREYQLNDSAKYYLDSLDRIGAGDYQPTEQDILRTRVKTTGIVETHFTFK 193
DSG+Q+CF+RS EYQLNDSAKY+LD LDR+G DY PTEQDILRTRVKTTGIVE HF+FK
Sbjct: 1 DSGVQDCFSRSNEYQLNDSAKYFLDDLDRLGTKDYMPTEQDILRTRVKTTGIVEVHFSFK 180
Query: 194 NLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLMLFDS 253
NL+F+LFDVGGQRSERKKWIHCFEDVTAIIFCVA+S YDQVLHEDETTNRM ESL LFDS
Sbjct: 181 NLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDS 360
Query: 254 ICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTICFPEYPGSNTYEDAAAYIQTQFESKNR 313
ICNNK+F DTSIILFLNKKDLF EKIKKSPLT+CFPEY G TYE+ AAYIQ QFE+KN+
Sbjct: 361 ICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTVCFPEYTGKQTYEEVAAYIQAQFEAKNK 540
Query: 314 SPNKEIYCHMTCATDTNNIQVVFDAVTDIIIANNLRGCGLY 354
S KEIYCH TCATDTNNIQ VFDAVTD+IIANNLRGCGLY
Sbjct: 541 SSQKEIYCHQTCATDTNNIQFVFDAVTDVIIANNLRGCGLY 663
>13527
Length = 1091
Score = 335 bits (860), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 156/198 (78%), Positives = 179/198 (90%)
Frame = -2
Query: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
MGCTLSAEERAA+ERSKAIEKNLKEDG+ AAKD+KLLLLGAGESGKSTIVKQMKIIHE G
Sbjct: 1042 MGCTLSAEERAAMERSKAIEKNLKEDGMQAAKDIKLLLLGAGESGKSTIVKQMKIIHEGG 863
Query: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGVEYGDKERKTDSKMVCDVVSRMEDTEPF 120
F+ ED KQY+PVV+SNTIQSL AI+RAM TL + +GD ER++D+KMV DV++RMEDTEPF
Sbjct: 862 FTSEDNKQYRPVVFSNTIQSLVAIIRAMGTLSIPFGDNERESDAKMVLDVIARMEDTEPF 683
Query: 121 SAELLSAMMRLWGDSGIQECFNRSREYQLNDSAKYYLDSLDRIGAGDYQPTEQDILRTRV 180
S ELL+AM RLW DSG+Q+CF+RS EYQLNDSAKY+LD LDR+G DY PTEQDILRTRV
Sbjct: 682 SEELLAAMERLWMDSGVQDCFSRSNEYQLNDSAKYFLDDLDRLGTKDYMPTEQDILRTRV 503
Query: 181 KTTGIVETHFTFKNLHFR 198
KTTGIVE HF+FKNL+F+
Sbjct: 502 KTTGIVEVHFSFKNLNFK 449
>29196
Length = 431
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 99/147 (67%), Gaps = 4/147 (2%)
Frame = -2
Query: 126 SAMMRLWGDSGIQEC----FNRSREYQLNDSAKYYLDSLDRIGAGDYQPTEQDILRTRVK 181
+AM RLW DSG+QEC N + LN S + RI + QP + +
Sbjct: 430 AAMKRLWLDSGVQECSRAATNTN*TIPLNISWMI*IG*ALRITS---QPN-RTFCAPESR 263
Query: 182 TTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETT 241
+ KNL+F+LFDVGGQRSERKKWIHCFEDVTAIIFCVA+S YDQVLHEDETT
Sbjct: 262 PPAL*RFISPLKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETT 83
Query: 242 NRMHESLMLFDSICNNKFFIDTSIILF 268
NRM ESL LFDSICNNK+F DTSIILF
Sbjct: 82 NRMQESLKLFDSICNNKWFTDTSIILF 2
>20516
Length = 534
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
Frame = +2
Query: 191 TFKNLHFRLFDV-GGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLM 249
TF+N+ F + +V GGQRS+R+KW CF +T+I+F A S +DQVL ED TNR+ ES
Sbjct: 41 TFRNIFFLVGEVTGGQRSQRQKWYQCFVGITSILFLAASSEFDQVLMEDRKTNRLQESCD 220
Query: 250 LFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTICFPEYPGSNTYEDAAAYIQTQFE 309
+F++I NNK F SIILFLNK DL +K L F + G + + I
Sbjct: 221 IFETIINNKSFSGVSIILFLNKMDLLQDKN*ACQLRRLFSRFSG*SQGH*CSQSI*ASAV 400
Query: 310 SKNRSPNKEIYC-HMTCATDTNNIQVVFDAVTDIIIANNLR 349
+ +K+ + H T A DT NI+ VF V D I+ +NLR
Sbjct: 401 *FAPT*SKQTFVHHFTTAIDTENIKHVFQDVKDTILHDNLR 523
>34094
Length = 452
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +1
Query: 54 KIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGVEYGDKERKTDSKMVCDV 110
+IIHE G+S E+ QYKPVVYSN IQS+ AIVRAM+ L VE+G +R C++
Sbjct: 103 RIIHEKGYSQEECLQYKPVVYSNAIQSMIAIVRAMNLLSVEFGHPDRAVSLFKSCNL 273
>08153
Length = 1703
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%)
Frame = +1
Query: 178 TRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHE 237
T + T G +KN+ F ++DVGGQ R W H F++ +IF V + +++
Sbjct: 163 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERINEA 342
Query: 238 DETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDL 274
E RM L D+I I++F NK+DL
Sbjct: 343 KEELARMLNEDDLRDAI----------ILVFANKQDL 423
>09827
Length = 1201
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%)
Frame = -3
Query: 178 TRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHE 237
T + T G +KN+ F ++DVGGQ R W H F++ +IF V + ++V
Sbjct: 1034 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERVQEA 855
Query: 238 DETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDL 274
E RM N D +++F NK+DL
Sbjct: 854 REELTRM----------LNEDELRDAVLLVFANKQDL 774
>10862
Length = 2896
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = -3
Query: 192 FKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLMLF 251
+ F ++DVGGQ R W H + +IF V + D++ DE +H
Sbjct: 2495 LQECQFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRI---DEARQELHR----- 2340
Query: 252 DSICNNKFFIDTSIILFLNKKDL 274
I N++ D I++F NK+DL
Sbjct: 2339 --IINDREMRDAIILIFANKQDL 2277
>18949
Length = 414
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 36/87 (41%)
Frame = +3
Query: 190 FTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLM 249
+ + F FD+GG R R+ W F V I+F V + T R+ E+
Sbjct: 42 LSMGGMTFTTFDLGGHRQARRVWKDYFPAVDGIVFIVDV----------HDTERITEAKA 191
Query: 250 LFDSICNNKFFIDTSIILFLNKKDLFG 276
DS+ + D +++ NK D G
Sbjct: 192 ELDSLLRDDQIADIPVLVLGNKMDKHG 272
>11378
Length = 1688
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 42/100 (42%)
Frame = +3
Query: 174 DILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQ 233
D + V T + + F FD+GG R R+ W F V I+F V
Sbjct: 390 DKMAQHVPTLHPTSEELSMGGMRFTTFDLGGHRQARRVWKDYFPAVDGIVFLVD------ 551
Query: 234 VLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKD 273
+H+ E R+ E+ DS+ ++ + I++ NK D
Sbjct: 552 -VHDRE---RLVEAKAELDSLMTDEQVANAPILVLGNKID 659
>18208
Length = 458
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 193 KNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
K ++D+GGQR R W + FE+ +I+ +
Sbjct: 176 KGFKLNVWDIGGQRRIRPYWKNYFENTDLLIYVI 75
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|22122625|ref|NP_666220.1|
3-hydroxyisobutyryl-Coenzyme A hydrolase [Mus musculus]
(385 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
36681 399 e-112
13881 69 3e-12
11398 38 0.006
04023 36 0.025
26426 34 0.085
04595 31 0.75
>36681
Length = 1210
Score = 399 bits (1026), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/360 (54%), Positives = 260/360 (72%), Gaps = 2/360 (0%)
Frame = +3
Query: 21 VILQHLRMSMHTEAA--EVLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKTWEQDP 78
VIL+H+RM+ + A EVL G VI LNRPK LNAL+LNMIR IYP++ WE DP
Sbjct: 6 VILKHVRMAQLSSQATDEVLFNAVGDKRVIVLNRPKALNALNLNMIRHIYPKMLEWETDP 185
Query: 79 DTFLXXXXXXXXXXXXXXXDIKALSEAKKARQNLTQDLFREEYILNNAIASCQKPYVALI 138
+ DI+A++E+ K +L +D F+EEY+LN I S +KPY+A+I
Sbjct: 186 NISCVVIKGAGDKAFCAGGDIRAVTESGKVGGDLGKDFFKEEYMLNYKIGSYRKPYIAVI 365
Query: 139 DGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTG 198
DGITMGGGVGLSVHG++RVATE+++FAMPET IGLFPDVGGG+FLP LQG+LG +LALTG
Sbjct: 366 DGITMGGGVGLSVHGKYRVATEKTVFAMPETAIGLFPDVGGGHFLPWLQGRLGTYLALTG 545
Query: 199 YRLKGRDVHRAGIATHFVDSEKLRVLEEELLALKSPSAEDVAGVLESYHAKSKMDQDKSI 258
+RLKGRDV AG+ATHFV +EKL LE+ L+ L S V VL+SYH+++ +D+DK
Sbjct: 546 FRLKGRDVFHAGVATHFVQAEKLAELEQSLMQLPEASHLQVEKVLDSYHSQNPVDKDKPF 725
Query: 259 IFEEHMDKINSCFSANTVEQIIENLRQDGSPFAIEQMKVINKMSPTSLKITLRQLMEGSS 318
+ H+D INS F ++VE I+++L+ S +A Q+ INKMSPTSLK+TLRQL G +
Sbjct: 726 VLAPHLDTINSVFDKDSVEDIVQHLQSLPSEWAQLQLNTINKMSPTSLKVTLRQLRMGET 905
Query: 319 KTLQEVLIMEYRITQACMEGHDFHEGVRAVLIDKDQTPKWKPANLKDVTDEDLNSYFKSL 378
+L ++L +EYR++Q C++ HDF+EGVRAVL+DKDQ+P+W P +L+ VT E L+ YF L
Sbjct: 906 LSLADILQVEYRLSQRCLKDHDFYEGVRAVLVDKDQSPRWNPDSLEGVTTEKLDWYFSPL 1085
>13881
Length = 1594
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Frame = +3
Query: 25 HLRMSMHTEAAEVLLERRGCG-----GVITLNRPKFLNALSLNMIRQIYPQLKTWEQDPD 79
H R+ + VL+ER CG V+ +NRP+ NALS ++ + L+ +QD +
Sbjct: 72 HARLLSTGKFQNVLVER--CGDKHNVAVVRMNRPRTFNALSDALMADVTAALQQLDQD-N 242
Query: 80 TFLXXXXXXXXXXXXXXXDIKALSEAKKARQNLTQDLFREEYILNNAIASCQKPYVALID 139
+ D+ L KK +++ + F ++ +I+ C+KP +A ++
Sbjct: 243 SVGCIVLTGSDRAFAAGADVPDLH--KKTFEDVIEQDFPAQFY---SISKCRKPIIAAVN 407
Query: 140 GITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYF-LALTG 198
G +GGG +++ A +++LFA PE +G P GG L R GK + ++
Sbjct: 408 GYALGGGXEIAMMCDIVYAGDKALFAQPEVTLGTLPGAGGTQRLIRAVGKSKAMEMVISA 587
Query: 199 YRLKGRDVHRAGIATHFVDSEKLRVLEEELLALKSPSAEDVAG 241
++ + R G+ + + E+L +AE +AG
Sbjct: 588 NKITAHEAERMGLVSKVFPA-------SEVLDAAVQTAEKIAG 695
>11398
Length = 3234
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -3
Query: 143 MGGGVGLSVHGQFRVAT--ERSLFAMPETGIGLFPDVGGGYFLPRLQG-KLGYFLALTGY 199
+GGG +++ Q+RVA +++ A+PE +GL P GG LP+L + LTG
Sbjct: 3226 LGGGFEVALACQYRVAVADKKTTVALPEVMLGLLPGAGGTQRLPKLVPIPTALDMMLTGK 3047
Query: 200 RLKGRDVHRAGIATHFV 216
+K + G+ V
Sbjct: 3046 TIKADRAKKMGLVDQLV 2996
>04023
Length = 997
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 157 VATERSLFAMPETGIGLF---PDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHRAGIAT 213
VATE+S FA P +GLF P V G +PR K+ + TG + +D G+ +
Sbjct: 32 VATEQSRFATPGVHVGLFCTTPGVAVGRAVPR---KVALEMMFTGQPISAQDALLHGLVS 202
Query: 214 HFVDSEKLR 222
V ++L+
Sbjct: 203 KVVPEDRLQ 229
>26426
Length = 413
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 44/113 (38%)
Frame = +2
Query: 50 LNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLXXXXXXXXXXXXXXXDIKALSEAKKAR 109
LNRP NA S M+ L+ + D D+ + D+K E K
Sbjct: 2 LNRPAAKNAFSRGMVTTFRDILE*IKSDNDSRVVVLRSLTPGIFCAGADLK---ERKGMT 172
Query: 110 QNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERS 162
T+ E L +I P +A +DG +GGG+ +++ R A +
Sbjct: 173 TEETKQFVTELRALLVSIEQLPMPVIAALDGAALGGGLEMALACDIRTAASNA 331
>04595
Length = 1947
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Frame = +2
Query: 117 FREEYILN-----NAIASCQKPYVALIDGITMGG------GVGLSVHG-QFRVATERSLF 164
F E Y N +A+A C+KP +A ++G +GG V LS+ G + + ++RS +
Sbjct: 26 FAETYNSNFLMDWDAVAKCRKPIIAAVNGYALGGVVSWP*CVTLSMLGTRHSLDSQRSPW 205
Query: 165 AMPETGIGLFPDVGGGYFLPR 185
A P G+ D G + PR
Sbjct: 206 A-PFQVRGVHSDXCGRWESPR 265
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|27370360|ref|NP_766478.1| gamma-aminobutyric acid
(GABA-A) transporter 4 [Mus musculus]
(627 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08387 400 e-112
15924 293 2e-79
08953 282 2e-76
32211 217 1e-56
21405 140 2e-46
18526 169 3e-42
14556 150 1e-36
19604 135 4e-32
02570 121 1e-27
26872 119 4e-27
33291 72 2e-21
26038 96 3e-20
25926 84 2e-16
14638 81 1e-15
21870 69 9e-13
31151 52 6e-07
05476 29 5.4
37391 28 8.1
04357 28 8.1
>08387
Length = 4991
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/422 (50%), Positives = 276/422 (65%), Gaps = 9/422 (2%)
Frame = -2
Query: 204 RRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGKVVYVTATFPYIMLLIL 263
+VL ISDGI+ +G ++W+LALCLL AW + Y CI KG +S+GKV+YVTAT PYI +LIL
Sbjct: 4423 EQVLKISDGIDDMGTVKWDLALCLLLAWVVVYACICKGIRSSGKVMYVTATSPYIFMLIL 4244
Query: 264 LIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGTQIFFSYAICLGCLTALGSXXXXXX 323
LIR L GA EG+ FYL P++++L + +VWVDAGTQIFFS +I LG LTALGS
Sbjct: 4243 LIRNSLLDGAKEGVDFYLTPNMTKLGEMEVWVDAGTQIFFSSSIALGTLTALGSYNKFKH 4064
Query: 324 XCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTM 383
YRD ++ +NS TSF AGF +F++LG+MA Q PI +VAESGPGLAFIAYPKAV
Sbjct: 4063 NSYRDSVIFALVNSVTSFFAGFIVFTILGYMAKLQNRPIKDVAESGPGLAFIAYPKAVAQ 3884
Query: 384 MPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRRELLILALSIISY 443
MPLSPLW+ LFF+M+I LGLDSQFV VE +VT +VD YP++ R+GYR+E+ I + II +
Sbjct: 3883 MPLSPLWSILFFLMVILLGLDSQFVGVEGVVTTIVDQYPRLLRKGYRKEIFIGFICIIMF 3704
Query: 444 FLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYDNIEDMIG--- 500
F+GL M++ GGMY+FQLFD Y+ S + LL VA FE + I ++YG RF DNI+ M+G
Sbjct: 3703 FVGLAMVSNGGMYVFQLFDYYSGSRIILL-VAFFELIGISYIYGVFRFLDNIKMMLGDHW 3527
Query: 501 -YRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKY-----NNVYTYPAWGYGIGWLMAL 554
+ L + CW V++P C IF+ + Y L Y Y YP W GIGW +A
Sbjct: 3526 MVKTLPFMVVCWTVLSPAFCIAIFVMSAINYSELDYARPGSKGTYVYPDWAVGIGWALAA 3347
Query: 555 SSMLCIPLWIFIKLWKTEGTLPEKLQKLTVPSADLKMRGKLGASPRTVTVNDCEAKVKGD 614
SS + IP+ + I W G E L+ L P LK T+ D E + G+
Sbjct: 3346 SSAVWIPI-VAIYKWVKNGATLEALKLLCKPYG-LKEHQLREQDKGERTLADLERERAGE 3173
Query: 615 GT 616
+
Sbjct: 3172 QS 3167
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Frame = -1
Query: 82 AFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRRVCPLFEGIGYATQVIEAHLNVY 141
AFLIPY + I GIP+F+LE A+GQF + GG+ W V P+ +GIG A+ +I LN Y
Sbjct: 4790 AFLIPYFICVIFGGIPLFYLEVAVGQFMNRGGLQAWNLV-PILQGIGLASCIIVFFLNCY 4614
Query: 142 YIIILAWAIFYLSNCFTTELPWATCGHEWNTEK--CVEFQ-KLNFSNYSHVSLQNATSPV 198
Y +IL WA +Y + FT+ELPW TC H+WN + V+FQ K+N + +++ + PV
Sbjct: 4613 YNVILTWAFYYFFSSFTSELPWETCDHDWNNKTVCAVDFQAKVNETGDPNIT-KILVDPV 4437
Query: 199 MEFWERRVLAISDGIEHIGNLR 220
E + IE IG R
Sbjct: 4436 TE-------SGRTSIEDIGRYR 4392
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -3
Query: 40 KAVHERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFIC 93
K +++R W +F+L+ G +GLGNVWRFPYLCYKNG G +P + +C
Sbjct: 4914 KDLNKREQWGRAFDFLLACIGFSVGLGNVWRFPYLCYKNGEG---LPDPLLHLC 4762
>15924
Length = 2588
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 234/375 (62%), Gaps = 2/375 (0%)
Frame = +3
Query: 196 SPVMEFWERRVLAISDGIE--HIGNLRWELALCLLAAWTICYFCIWKGTKSTGKVVYVTA 253
SP ++ + VL +++ + ++G + ++ L L AW + +FC+ KG KS+GKVVY TA
Sbjct: 69 SPAADYLSQYVLRLNEATDMANLGGISLKMILTLALAWLLIFFCLMKGVKSSGKVVYFTA 248
Query: 254 TFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGTQIFFSYAICLGCLT 313
TFPY++L++LL+RGVTL G +G+KFY+ P+ +L+D +VW DA TQIF+S + G L
Sbjct: 249 TFPYVILVVLLVRGVTLEGHLDGVKFYVIPEWDKLADAKVWGDAATQIFYSLGVGFGGLL 428
Query: 314 ALGSXXXXXXXCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLA 373
+ S CYRD IM+ +N TS AGFAIFS+LG MA+ + +VA SGPGLA
Sbjct: 429 TMASYNKFKNNCYRDAIMVAVINCSTSIFAGFAIFSLLGHMAHVNNQAVEDVASSGPGLA 608
Query: 374 FIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRREL 433
F+AYP+ +T +P LW+ LFF M++ LGLDSQF +E++++ + DM+P+ R+ R+ L
Sbjct: 609 FVAYPEGITKLPAQSLWSFLFFFMILTLGLDSQFAMMETVISGISDMFPRTLRK--RKVL 782
Query: 434 LILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYD 493
++ + LG+ T+GGM++ L D Y+ S L+FVA+ E +CI +VYG F +
Sbjct: 783 FTFCACLVGFLLGIPQATKGGMWVLTLMDWYSGS-YNLMFVALAELICIMYVYGWRNFSN 959
Query: 494 NIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYTYPAWGYGIGWLMA 553
++E M+G++P W V+TP I I ++Y P Y+ Y + W G+GW+M
Sbjct: 960 DVEMMVGFKPNIYWLANWLVITPIAIGFIIIIGAIQYTPASYDG-YEFEDWVQGLGWVMV 1136
Query: 554 LSSMLCIPLWIFIKL 568
+ I + F+++
Sbjct: 1137TVPIASIFVVGFVQM 1181
>08953
Length = 2245
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/349 (42%), Positives = 223/349 (63%)
Frame = +1
Query: 222 ELALCLLAAWTICYFCIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYL 281
++ L L AW + +FC+ KG KS+GKVVY TATFPY++LL+LL+RGVTL G EGIKFY
Sbjct: 1 KIILTLALAWILIFFCLMKGVKSSGKVVYFTATFPYVILLVLLVRGVTLSGHLEGIKFYT 180
Query: 282 YPDLSRLSDPQVWVDAGTQIFFSYAICLGCLTALGSXXXXXXXCYRDCIMLCCLNSGTSF 341
P +L+D +VW DA TQIF+S + G L + S C+RD IM+ +N GTS
Sbjct: 181 IPKWDKLADAKVWGDAATQIFYSLGVGFGGLLTMSSYSKFKNNCHRDAIMVALINCGTSI 360
Query: 342 VAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFL 401
AGFAIF++LG MAY + +VA+SGPGLAF+AYP+ +T +P LWA LFF M++ L
Sbjct: 361 FAGFAIFALLGHMAYVTNQDVDKVADSGPGLAFVAYPEGITKLPAMSLWAFLFFFMILTL 540
Query: 402 GLDSQFVCVESLVTAVVDMYPKVFRRGYRRELLILALSIISYFLGLVMLTEGGMYIFQLF 461
GLDSQF +E++++ + DM+P++ R+ + ++ + LG+ T+GGM++ L
Sbjct: 541 GLDSQFAMMETVISGISDMFPRLLRK--HKTFFTFICCLVGFLLGIPQATKGGMWVLTLM 714
Query: 462 DSYAASGMCLLFVAIFECVCIGWVYGSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAG 521
D Y+ S L+FVA+ E +C+ +VYG N+FY++IE MIG++P + W +TP
Sbjct: 715 DWYSGS-YNLMFVALAEIICLMYVYGFNKFYEDIEMMIGHKPNYYWRIHWLAITPIAIIF 891
Query: 522 IFIFFLVKYKPLKYNNVYTYPAWGYGIGWLMALSSMLCIPLWIFIKLWK 570
I + V+Y P Y+ Y + W G+GW+M + I + F+++++
Sbjct: 892 IIVIGAVQYTPASYSG-YEFEBWVQGLGWVMVSVPIALIFIVGFVQMFR 1035
>32211
Length = 836
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 138/185 (74%)
Frame = -1
Query: 331 MLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLW 390
+ CC F S+LGFMA QG+ +A+VAESGPGLAFIAYP+AV +P++PLW
Sbjct: 554 VFCCDQHVHQFPGRLCHLSILGFMAVRQGLDVADVAESGPGLAFIAYPEAVAQLPIAPLW 375
Query: 391 ATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRRELLILALSIISYFLGLVML 450
+ +FF+M+I LGLDSQFV VE +TAVVD+YP+V RRG+RRE+ I + +I+YF+GL M+
Sbjct: 374 SVMFFVMVILLGLDSQFVGVEGFITAVVDLYPRVLRRGHRREVFIAIICVIAYFIGLSMV 195
Query: 451 TEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYDNIEDMIGYRPLSLIKWC 510
TEGGMY+FQLFD Y+AS + L+ VA FEC+ + +VYG +RFYDN+E M G+R L+K
Sbjct: 194 TEGGMYVFQLFDYYSASRIVLV-VAFFECITVAYVYGVDRFYDNLEMMFGFRMGPLMKVS 18
Query: 511 WKVVT 515
W +T
Sbjct: 17 WMALT 3
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 86/112 (76%)
Frame = -2
Query: 237 CIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVD 296
CIWKG KS+GKV+Y TAT PY+++ +LLIRGVTL GAS G+K+YL P+ SRL DPQVWVD
Sbjct: 835 CIWKGIKSSGKVMYFTATTPYVLMFVLLIRGVTLEGASTGLKYYLLPEWSRLKDPQVWVD 656
Query: 297 AGTQIFFSYAICLGCLTALGSXXXXXXXCYRDCIMLCCLNSGTSFVAGFAIF 348
AGTQIFFSY+I LG LTALGS +RD + +N+ TSF+AGF IF
Sbjct: 655 AGTQIFFSYSISLGTLTALGSYNRFTHNVFRDSVCFAVINTFTSFLAGFVIF 500
>21405
Length = 542
Score = 140 bits (352), Expect(2) = 2e-46, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 87/125 (69%)
Frame = +2
Query: 430 RRELLILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVYGSN 489
R+E+ I + ++SY +GL +T+GGMYIFQ+ DSYA SG CLL++ FECV I W YG +
Sbjct: 170 RKEIFIAIVCMLSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVD 349
Query: 490 RFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYTYPAWGYGIG 549
RFYD I+DMIGY P K+CW TP IC G+F F +V++K +KY + Y+YP W + G
Sbjct: 350 RFYDGIKDMIGYYPTVWWKFCWCFTTPAICLGVFFFNIVQWKSIKYLD-YSYPWWAHAFG 526
Query: 550 WLMAL 554
W AL
Sbjct: 527 WFTAL 541
Score = 65.1 bits (157), Expect(2) = 2e-46, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = +1
Query: 375 IAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYR 430
+ YP AV +P SP+W+ LFF ML+ +GLDSQF +E +TAV+D +P++ R+ R
Sbjct: 10 LVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAVIDEWPQLLRKTQR 177
>18526
Length = 537
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 115/173 (66%)
Frame = -2
Query: 216 IGNLRWELALCLLAAWTICYFCIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASE 275
+G +RW+L + L +W + C++KG K GKV++ A FPY++LL+LLIRGVTLPGA +
Sbjct: 533 LGTVRWQLLITLAVSWLCVFLCLFKGVKVLGKVMHFAAPFPYMVLLVLLIRGVTLPGAID 354
Query: 276 GIKFYLYPDLSRLSDPQVWVDAGTQIFFSYAICLGCLTALGSXXXXXXXCYRDCIMLCCL 335
GI FY+ P +L + QVW DA QIF+S + G + + S YRD +++ +
Sbjct: 353 GISFYIIPRWEKLLEFQVWGDAALQIFYSVGMAWGGIITMASYNKFNNNVYRDAMIVPLI 174
Query: 336 NSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSP 388
N GTS AGF IFS+LGFMA+E G + ++ GPGL F+AYP+AV+ +P+SP
Sbjct: 173 NCGTSIFAGFVIFSILGFMAHEAGKNVEDIVTQGPGLTFVAYPEAVSKLPISP 15
>14556
Length = 552
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 95/137 (69%), Gaps = 3/137 (2%)
Frame = -2
Query: 44 ERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLET 103
ERG+W ++++F+LS G +GLGNVWRFPYL Y+NGG FL PY++ I G+P+FFLE
Sbjct: 422 ERGNWGSQLDFLLSCVGYAVGLGNVWRFPYLAYRNGGATFLFPYIIMLIIAGLPLFFLEL 243
Query: 104 ALGQFTSEGGITCWRRVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFT---TE 160
ALGQF SEG IT W ++ P F GIG+A +I +++YY +I+ +AI+Y+ F +
Sbjct: 242 ALGQFASEGPITVW-KMSPFFSGIGFAMCIISGVVSIYYNVIITYAIYYMFVSFVNLDND 66
Query: 161 LPWATCGHEWNTEKCVE 177
LPWA+C H W T C +
Sbjct: 65 LPWASCNHTWATPSCRD 15
>19604
Length = 419
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 90/136 (66%)
Frame = -3
Query: 214 EHIGNLRWELALCLLAAWTICYFCIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGA 273
E IG RW LALCLL +W + C+ KG KS+GKVVY TATFPY++L+ILLIRG L GA
Sbjct: 408 ELIGTPRWRLALCLLLSWVVVILCLIKGIKSSGKVVYFTATFPYVILIILLIRGALLEGA 229
Query: 274 SEGIKFYLYPDLSRLSDPQVWVDAGTQIFFSYAICLGCLTALGSXXXXXXXCYRDCIMLC 333
EG++F++ P+ +L+D +VWV A Q+FFS ++ G + GS Y D +++
Sbjct: 228 KEGVEFFIIPEWDKLTDVKVWVAAAGQMFFSLSVSFGGIIMFGSYNKFTNNVYGDALLIS 49
Query: 334 CLNSGTSFVAGFAIFS 349
++ TS +AGF +F+
Sbjct: 48 VMDLVTSVIAGFVVFT 1
>02570
Length = 1067
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Frame = -3
Query: 374 FIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRREL 433
F+AYP+A++ +P LW+ LFF ML LGLDS+F +E+++T + D P+ R Y + +
Sbjct: 1065 FVAYPEALSNLPPPQLWSVLFFFMLFTLGLDSEFGLMETILTCIQDEMPRX--RKY-KSV 895
Query: 434 LILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYD 493
+ + I YFL L + GG Y+ L D Y A +L ++ FE + + W YG RF
Sbjct: 894 MCIGFGIGCYFLALPCVCNGGDYVVTLMDHYGAD-FSVLILSCFEVMSVMWXYGVMRFQK 718
Query: 494 NIEDMIGYRPLSLIKW--CWKVVTPGICAGIFIFFLVKYKPLKYNN--VYTYPAWGYGIG 549
++E M+G RP+ W CW + P + A +F++ +V+Y P Y++ ++ YP + IG
Sbjct: 717 DLEYMLGRRPMGWPYWVFCWS-IAPILIAALFLYRMVEYVPPHYDSEKLHPYPQFAQNIG 541
Query: 550 WLMALSSMLCIPLW 563
W + + + IPLW
Sbjct: 540 WFLLVVVLCPIPLW 499
>26872
Length = 406
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 89/132 (67%)
Frame = +2
Query: 372 LAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRR 431
L F+AYP+A++ +P + WA +FF+ML+ LGLDS F E+++TA+ D +P V RR R
Sbjct: 2 LVFVAYPEAISTLPGASFWAVIFFLMLLTLGLDSSFGGSEAIITALSDEFP-VLRR--HR 172
Query: 432 ELLILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRF 491
EL +LAL ++ + +GL EGG+Y+ L D +AA G +LF FE + + W YG +RF
Sbjct: 173 ELFVLALFVLYFIVGLASCAEGGLYVVNLLDQFAA-GYSILFAVFFETLAVSWAYGLDRF 349
Query: 492 YDNIEDMIGYRP 503
+++E M+G+RP
Sbjct: 350 SEDLEAMLGHRP 385
>33291
Length = 467
Score = 71.6 bits (174), Expect(2) = 2e-21, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = -1
Query: 327 RDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMP 385
RD I++ +N TSF AGFAIFS+LGFMA +GV + +V G GL F+AYP+A+ MP
Sbjct: 317 RDSIIVPIINCLTSFYAGFAIFSILGFMAASKGVEVEDVTTDGTGLVFVAYPEALARMP 141
Score = 49.3 bits (116), Expect(2) = 2e-21, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = -2
Query: 277 IKFYLYPDLSRLSDPQVWVDAGTQIFFSYAICLGCLTALGS 317
IKFYL PD S+LS+ VW+ A QIFFS + G LTA+ S
Sbjct: 466 IKFYLQPDASKLSESSVWLAAAAQIFFSLSTSTGSLTAMSS 344
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = -3
Query: 352 GFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVE 411
GF +QG G P L LW+ LFF M+I LG+ +Q E
Sbjct: 243 GFHGRQQGC*SRRRHHRRHGPGVCGLP*GAGQDALPQLWSVLFFFMMICLGMGTQIPSAE 64
Query: 412 SLVTAVVDMY 421
+L+TA+ D Y
Sbjct: 63 TLLTALQDEY 34
>26038
Length = 426
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%)
Frame = -2
Query: 390 WATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRRELLILALSIISYFLGLVM 449
WA +FF ML+ LG+DS F +ES +T + D V R Y RE+L L + ++F L
Sbjct: 416 WAIIFFFMLLTLGIDSAFGGLESPLTGLHDELKTVMRMRYSREVLTLVVVGSAFFCSLPC 237
Query: 450 LTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYDNIEDMIGYRPLSLIKW 509
LTEGG+Y+F + D++AA G +LF + + + + W YG N+F ++E M G +P +
Sbjct: 236 LTEGGIYVFTILDTFAA-GTSILFTVLCQVIAVSWFYGINQFCRDVEKMTGSQPSMYWRV 60
Query: 510 CWKVVTP 516
CWK V P
Sbjct: 59 CWKFVCP 39
>25926
Length = 675
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Frame = +1
Query: 484 WVYGSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNN---VYT 540
+VYG NRFYDN+E M G+R +K CW V+TP IFI + Y L Y Y
Sbjct: 1 FVYGVNRFYDNLEMMFGFRVGPWMKICWTVLTPLYTMVIFIMGCISYSDLTYKRKTVTYE 180
Query: 541 YPAWGYGIGWLMALSSMLCIPLWIFIKLWKTEGTLPEKLQKLTVP 585
YP+W G+GW M S++ IPL + ++ +G+ E+++ LT P
Sbjct: 181 YPSWAIGVGWSMVAMSIIFIPLVMVFRMLTADGSFVERVKHLTKP 315
>14638
Length = 421
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Frame = -3
Query: 426 RRGYRRELLILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWV 485
R +R + +++ + + LGL T+GG YI L D + G LL V FE V I WV
Sbjct: 419 RGKWRSIIFRVSMCALGFILGLPQTTQGGTYILDLLDIFV--GFPLLLVGFFEFVAIVWV 246
Query: 486 YGSNRFYDNIEDMIGYRPLSLI------KWCWKVVTPGICAGIFIFFLVKYKPLKYNNVY 539
YG R +++ M+G P++ + W W VV+PG+ I +F V Y P+
Sbjct: 245 YGFRRISEDVMMMMGDHPITRMVYDFYFSWTWLVVSPGLLLAIIVFDSVNYVPITGPG-- 72
Query: 540 TYPAWGYGIGWLMALSSMLCIPLW 563
YP W +GWL+ M+ IP+W
Sbjct: 71 -YPPWAETLGWLVVTFIMMWIPVW 3
>21870
Length = 347
Score = 68.6 bits (166), Expect(2) = 9e-13, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = -2
Query: 45 RGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVV 89
R W +EF+++ G +GLGNVWRFPYLCY+NGGGAFLIPY++
Sbjct: 199 RATWGRHLEFIVTCIGFAVGLGNVWRFPYLCYRNGGGAFLIPYLI 65
Score = 23.1 bits (48), Expect(2) = 9e-13, Method: Compositional matrix adjust.
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 95 GIPVFFLETALGQFTS 110
GIP+F LE GQF S
Sbjct: 48 GIPLFCLEITFGQFAS 1
>31151
Length = 322
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = -2
Query: 483 GWVYGSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYTYP 542
GW+YG R ++I M+G+ P ++ WK +TP + + +F L+ Y P Y Y Y
Sbjct: 321 GWIYGVARIREDICLMLGHGPPFILTVFWKFITPALLLVVLVFTLMNYTPPSYGQ-YVYG 145
Query: 543 AWGYGIGWLMALSSMLCIP 561
G+ GW++ALSS+L P
Sbjct: 144 TGGHVFGWVVALSSLLPSP 88
>05476
Length = 689
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = -2
Query: 542 PAWGYGIGWLMALSSM-----LCIPLWIFIKLWKTEGTLPEKLQKLTV--PSADLKMRGK 594
P W G ++A+SS LC+PLW+F+ L+ T +Q L+ PS D
Sbjct: 622 PRWDAGAS-VLAMSSFTVTL*LCLPLWVFMSLFFTIFHSACFIQSLSTISPSRDXXDN-- 452
Query: 595 LGASPRTVTVNDC 607
GA P + + DC
Sbjct: 451 -GAFPCSXXI*DC 416
>37391
Length = 199
Score = 28.5 bits (62), Expect = 8.1, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 223 LALCLLAAWTICYFCIWKGTKST 245
L CL+A ++CYF +WK +ST
Sbjct: 119 LVFCLVAVSSVCYFFLWKEFRST 187
>04357
Length = 1093
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 155 NCFTTELPWATCGHEWNTEKCVEFQKLN 182
N F T TC H WN++K E K N
Sbjct: 1007 NQFPTHASTNTCKHSWNSQKTCEHSKHN 924
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981690|ref|NP_112442.2| heat shock protein 8 [Mus
musculus]
(646 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30255 295 e-112
21024 224 1e-58
37715 152 2e-56
27378 200 2e-51
26390 168 6e-42
24750 141 1e-33
06909 100 4e-26
31218 95 7e-20
09881 89 6e-18
20979 83 3e-16
12271 62 5e-10
13684 56 4e-08
03996 51 2e-06
34036 48 1e-05
13300 46 6e-05
>30255
Length = 1761
Score = 295 bits (756), Expect(2) = e-112, Method: Compositional matrix adjust.
Identities = 150/199 (75%), Positives = 155/199 (77%)
Frame = -1
Query: 328 KSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEN 387
K IH+IVLVGGSTRIPKIQKLLQDFFNGKEL KSINPDE IL GDKSE
Sbjct: 1644 KPGIHEIVLVGGSTRIPKIQKLLQDFFNGKELCKSINPDEAVAYGACVQAAILHGDKSEE 1465
Query: 388 VQDXXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGER 447
VQD GIETAGGVMT LIKRN YSDNQPGVLIQVYEGER
Sbjct: 1464 VQDLLLLDVAPLSMGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGER 1285
Query: 448 AMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDK 507
AMT+DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA DKSTGKENKITITNDK
Sbjct: 1284 AMTRDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAADKSTGKENKITITNDK 1105
Query: 508 GRLSKEDIERMVQEAEKYK 526
GRLSKE+IERMV +AEK +
Sbjct: 1104 GRLSKEEIERMVNDAEKSR 1048
Score = 128 bits (322), Expect(2) = e-112, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 74/79 (93%)
Frame = -3
Query: 534 DKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFE 593
+++SSKNSLESYAF+MK+T+EDEK++ KI +EDK+ I+DKCNE+ISWLD NQTAEK+E++
Sbjct: 1027 NRISSKNSLESYAFHMKSTIEDEKIKDKIGEEDKKTIVDKCNEVISWLDANQTAEKDEYD 848
Query: 594 HQQKELEKVCNPIITKLYQ 612
+QKELEKVCNPIITKLYQ
Sbjct: 847 DKQKELEKVCNPIITKLYQ 791
>21024
Length = 3220
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 167/457 (36%), Positives = 242/457 (52%), Gaps = 22/457 (4%)
Frame = +1
Query: 166 GLNVLRIINEPTAAAIA--YGL-----DKKVGAER----NVLIFDLGGGTFDVSILTIED 214
G NVLR+INEPTAAA+A +G D V R ++ + D G ++
Sbjct: 727 G*NVLRVINEPTAAALALWHGQV*R*SDSGV*FRRRDV*HLYLGDPEG--------SV*S 882
Query: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
I + + G L + + RK K S+ + + R +++K L
Sbjct: 883 QINQRRHIPGRRGLLTTTWSTSWHQNL-----RKSKD*TSQRIQWLCRDYVRQQKSKIEL 1047
Query: 275 SSSTQASIEIDSLYEGID------FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDK 328
SSS Q I + Y +D ++R++FE L L + T+ P +KAL+DA++ K
Sbjct: 1048 SSSLQTDINLP--YLTMDASGPKHMNLKLSRSKFESLVESLVKRTVGPCQKALQDAEVKK 1221
Query: 329 SQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENV 388
S I +++LVGG +R+PK+Q +QD F G+ +KS+NPDE +L+GD V
Sbjct: 1222 SDIGEVILVGGMSRMPKVQSTVQDLF-GRTPSKSVNPDEAVAIGAAIQGGVLAGD----V 1386
Query: 389 QDXXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 448
D GIET GGV T LI RN +D Q V I+V++GER
Sbjct: 1387 TDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVHQGERE 1566
Query: 449 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKG 508
M DN LLG+F L GIPPAPRGVPQ+EVTFDIDANGI+NVSA DK TGKE +I I + G
Sbjct: 1567 MANDNKLLGQFTLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGG 1746
Query: 509 RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQ 568
LSK++IE M++ AE + +D ++++ V N +S + ++ +E+ K Q + E+
Sbjct: 1747 -LSKDEIENMIKNAEAHAEDDRRKKELVEVLNQADSIIHDTESKMEEFKDQ--LPQEECD 1917
Query: 569 KILDKCNEIISWL--DKNQTAEK---EEFEHQQKELE 600
K+ +K NE+ L N+ EK E + QQK L+
Sbjct: 1918 KLREKINEVKQLLANKDNEAPEKIREETSDLQQKSLK 2028
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 158/269 (58%), Gaps = 2/269 (0%)
Frame = +3
Query: 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 61
KG +GIDLGTT SCV + + + +++ N +G+RTTPS +AFT D ER+ G AK Q
Sbjct: 243 KGHVIGIDLGTTNSCVALMEGKQAKVLENSEGSRTTPSVIAFTKDGERISGMPAKRQAVT 422
Query: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
N NT+ KRLIGRRF+D VQ DMK+ + +V A VE +G K + P +V +
Sbjct: 423 NAENTLSATKRLIGRRFEDPEVQKDMKNVSYKIVK-ASNGDAWVEAQG--KMYSPSQVGA 593
Query: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
VL KMKE AE+YLG V NAVVTVPAYFNDSQRQATKDAG I+GL + + +
Sbjct: 594 FVLMKMKETAESYLGSKVNNAVVTVPAYFNDSQRQATKDAGQISGLKCVACDQRTHSCSS 773
Query: 182 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE-DFDNRMVNH 240
+ + + + G +S + + + + T +TH E FDN MVN
Sbjct: 774 CFMAWTSLKIK**RCLI*AEGRLTSLSWRSRRECLKSNQPT--ETHSWEERTFDNYMVNF 947
Query: 241 FIAEFKRKHKKDISENKRAVRRLRTACER 269
+EFK++ DI+++ AV+RLR A E+
Sbjct: 948 LASEFKKEQGLDITKDPMAVQRLREAAEK 1034
>37715
Length = 468
Score = 152 bits (384), Expect(2) = 2e-56, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 84/97 (86%)
Frame = -2
Query: 94 VVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDS 153
V+N + +P +Q G TK+F PEE+S+MVL KM++IAEAYLGK + NAVVTVPAYFND+
Sbjct: 452 VINKSNKPHIQALVSGATKTFAPEEISAMVLGKMRDIAEAYLGKKIDNAVVTVPAYFNDA 273
Query: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVG 190
QRQATKDAGTIAGLNV+RIINEPTAAAIAYGLDK+ G
Sbjct: 272 QRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKRDG 162
Score = 85.5 bits (210), Expect(2) = 2e-56, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 46/49 (93%)
Frame = -1
Query: 194 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI 242
N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R+++HFI
Sbjct: 156 NILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFI 10
>27378
Length = 410
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/124 (77%), Positives = 107/124 (86%)
Frame = -1
Query: 244 EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFE 303
EFKRK+KKD+ N RA+RRLRTA ERAKRTLSSST+A+IE+D+L+EG DFYT I+RARFE
Sbjct: 410 EFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEVDALFEGHDFYTKISRARFE 231
Query: 304 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 363
EL ADLFR TL PVEKAL DAK+DK IHDIVLVGGSTRIPK+Q LLQ FF GK LN SI
Sbjct: 230 ELCADLFRQTLAPVEKALNDAKMDKQMIHDIVLVGGSTRIPKVQNLLQQFFGGKSLNLSI 51
Query: 364 NPDE 367
NPDE
Sbjct: 50 NPDE 39
>26390
Length = 665
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 102/154 (66%)
Frame = +2
Query: 402 GIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL 461
GIET GGVMT LI R DNQ V IQVYEGER+ TKDN+LLG+F+L
Sbjct: 50 GIETVGGVMTTLIARGTTIPARKAKVFSTAQDNQDSVTIQVYEGERSRTKDNHLLGRFDL 229
Query: 462 TGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQE 521
TGIP APRGVPQIEVTF +DANG++ VSA DK TG++N I I LS ED+ERMVQE
Sbjct: 230 TGIPAAPRGVPQIEVTFQVDANGVMQVSAEDKGTGQKNDIIIQQSGSGLSPEDVERMVQE 409
Query: 522 AEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED 555
A+ + ED K R+ S+ LES A+ + ++D
Sbjct: 410 AQDFAEEDRKFRELTESRTGLESLAYTAQHQLQD 511
>24750
Length = 552
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +1
Query: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKE 498
++QVYEGERAMT+DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA DKSTGKE
Sbjct: 154 MLQVYEGERAMTRDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAADKSTGKE 333
Query: 499 NKITITNDKGR 509
NKITITNDKG+
Sbjct: 334 NKITITNDKGQ 366
>06909
Length = 456
Score = 100 bits (249), Expect(2) = 4e-26, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 59/66 (89%)
Frame = -3
Query: 547 FNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPI 606
+MK+T+EDEK++ KI+ EDK+ ILDKC+E+I+WLD NQ AEK+E++ +QKE+EKVCNPI
Sbjct: 388 LHMKSTIEDEKIKDKISTEDKKTILDKCDEVIAWLDANQLAEKDEYDDKQKEIEKVCNPI 209
Query: 607 ITKLYQ 612
ITKLYQ
Sbjct: 208 ITKLYQ 191
Score = 36.2 bits (82), Expect(2) = 4e-26, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1
Query: 524 KYKAEDEKQRDKVSSKNSLESYA 546
KYK +DEKQ+ ++S+KNSLESYA
Sbjct: 456 KYKEDDEKQKSRISAKNSLESYA 388
>31218
Length = 322
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 68/100 (68%)
Frame = +2
Query: 225 DTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEI 284
DTHLGGEDFD R+V++ + K+K +D+ + RA+ RLR + E+AKR LSS +++
Sbjct: 2 DTHLGGEDFDQRLVDYLVKLIKQKTGRDVRHDTRAMSRLRRSAEKAKRALSSQHSTKVDL 181
Query: 285 DSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA 324
D + + T +TRA+FEELN DLFR TL V++AL D+
Sbjct: 182 DGVTSDLADLT-LTRAKFEELNTDLFRSTLTTVKRALEDS 298
>09881
Length = 600
Score = 89.0 bits (219), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/109 (40%), Positives = 64/109 (58%)
Frame = +3
Query: 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 62
K A G+ LGT +C+ V++ GK + AND G+R+TP VAFT + +G +AK + N
Sbjct: 177 KMAAYGVHLGTCSACLAVYKDGKTSVAANDAGDRSTPCVVAFTACDAEVGASAKQGIVSN 356
Query: 63 PTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGET 111
NTV + KR++G F+D V Q + P VVN +P +VE+K T
Sbjct: 357 VKNTVCNVKRILGLTFEDPVTQEYLASSPVKVVNQKNQPMFEVEFKERT 503
Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +2
Query: 136 GKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV 189
GK + +AV+ VP+ F+D QR A A + AG VLR+INE +AAA+AY L + V
Sbjct: 2 GKGIQDAVLAVPSDFSDKQRAAASAAASKAGFKVLRLINECSAAALAYDLGQTV 163
>20979
Length = 976
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Frame = +1
Query: 230 GEDFDNRMVNHFIAEFKRKHKKD--ISENKRAVRRLRTACERAKRTLSSSTQASIEIDSL 287
G + R+ +H F + K+ + +N RA+ +L ER K+ LS+++ +++ L
Sbjct: 70 GVEMTLRLRDHLAKVFNGQKKRSFKLEDNPRAMAKLLKEAERVKKVLSANSDHKAQVEGL 249
Query: 288 YEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQ 347
EG DF ++R + EL DL P+E AL+ +++ +I +I+L+GG +R+P++Q
Sbjct: 250 VEGEDFAAKVSREDYLELIKDLLARVTKPMEDALKVSEITMPEITEIILMGGGSRVPRVQ 429
Query: 348 KLLQDFFNGKELNKSINPDE 367
+ L F +L KSIN DE
Sbjct: 430 EELLKFSGKSDLGKSINTDE 489
>12271
Length = 1762
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +2
Query: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
DF +TR ++ L DL PV++ L +++ ++I +I+L+GG +R+PKI ++L
Sbjct: 41 DFSCKVTRDKYLHLIQDLLDRVTLPVQQVLTASQITWAEITEIILMGGGSRLPKIHEILL 220
Query: 352 DFFNGKELNKSINPDE 367
D+ KEL KS+N DE
Sbjct: 221 DYSGKKELGKSLNTDE 268
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +1
Query: 487 NVSAVDKSTGKENKITIT---NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 543
N A G K+ +T D LSK+ +++ + ++ DE++ ++N +E
Sbjct: 937 NKKAASAGKGFNEKLKVTVKVKDMAELSKDQVKQSKKRLTDWRKRDEEKAAVQKARNEVE 1116
Query: 544 SYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVC 603
S+ + + +E DE++ ILD+ ++ WL + K+ F E C
Sbjct: 1117 SFIITAQDKMSEETYLASSTDEERAXILDQLSQASDWLYEQSHQAKKWFSPTNTET*GTC 1296
Query: 604 N 604
+
Sbjct: 1297 S 1299
>13684
Length = 438
Score = 56.2 bits (134), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = -3
Query: 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 62
K A G+ LGT +C+ V++ GK + AND G+R+TP VAFT + +G +AK + N
Sbjct: 181 KMAAYGVHLGTCSACLAVYKDGKTSVAANDAGDRSTPCVVAFTACDAEVGASAKQGIVSN 2
>03996
Length = 1105
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = -2
Query: 304 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 363
EL DL P+E AL+ +++ +I +I+L+GG +R+P++Q+ L F +L KSI
Sbjct: 1056 ELIKDLLARVTKPMEDALKVSEITMPEITEIILMGGGSRVPRVQEELLKFSGKSDLGKSI 877
Query: 364 NPDE 367
N DE
Sbjct: 876 NTDE 865
>34036
Length = 363
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = +2
Query: 588 EKEEFEHQQKELEKVCNPIITKLYQ 612
EK+E++ +QKE+EKVCNPIITKLYQ
Sbjct: 2 EKDEYDDKQKEIEKVCNPIITKLYQ 76
>13300
Length = 453
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Frame = +3
Query: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVG---AERNVLIFDLGGGTFDVSIL 210
+R+A A G+NVL+++ + A A+ YG+ ++ + + +D+G + +++
Sbjct: 3 ERRAIMTAADXVGINVLQLMTDSAAVALNYGVFRRKNFNTTAQYYMFYDMGATSTVATVV 182
Query: 211 T-----IEDGI-------FEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKD--ISEN 256
+ +++G +K D LGG + R+ +H F + K+ + +N
Sbjct: 183 SYQVVKVKEGTRVESNPQLTIKGVGFDRTLGGLEMTLRLRDHLAKVFNGQKKRSFKLEDN 362
Query: 257 KRAVRRLRTACERAKRTLSSSTQASIEID 285
RA+ +L ER K+ LS+++ +++
Sbjct: 363 PRAMAKLLKEAERVKKVLSANSDHKAQVE 449
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|54261793|ref|NP_998781.1| plasma membrane calcium
ATPase 4 [Mus musculus]
(1205 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12151 276 e-112
06342 262 6e-70
29829 223 3e-58
00499 207 2e-53
21541 146 4e-35
36566 129 1e-29
35407 110 2e-28
08160 67 4e-11
28890 59 9e-09
14773 59 9e-09
04985 53 7e-07
33697 43 8e-04
13525 43 9e-04
14321 40 0.007
07486 39 0.015
32708 30 6.0
26294 30 6.4
>12151
Length = 880
Score = 276 bits (707), Expect(2) = e-112, Method: Compositional matrix adjust.
Identities = 144/198 (72%), Positives = 167/198 (84%), Gaps = 4/198 (2%)
Frame = +3
Query: 795 KKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVV 854
+KADVGFAMGI+GTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSI+KFLQFQLTVNVV
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 855 AVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLRRRPYGRNKPLIS 914
AV VAF GAC DSPLKA+QMLWVNLIMDT ASLALATE P+ LL+RRPYGR KPLIS
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPYGRTKPLIS 647
Query: 915 RTMMKNILGHAVYQLLIVFLLVFAG-DTLFDID---SGRKAPLNSPPSQHYTIVFNTFVL 970
+TM KNILGHA YQ+L++ LL+F G ++D + R+ P P +QH+TI+FN FV+
Sbjct: 648 KTMWKNILGHAFYQILVILLLLFQGAKAVWDRRWHPTSRETP--RPTNQHFTIIFNAFVM 821
Query: 971 MQLFNEINARKIHGEKNV 988
M LFNE+NARKIH ++N+
Sbjct: 822 MTLFNEVNARKIHDQRNI 875
Score = 150 bits (378), Expect(2) = e-112, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 82/98 (83%)
Frame = +1
Query: 699 DNVNTARAIATKCGILTPKDDFLCLEGKEFNSLIRNEKGEVEQEKLDKIWPKLRVLARSS 758
DNVNTAR+IA+KCGI+ P DD L LEGKEFN LIR+ +GE+ QEK+D++WP LRVLARSS
Sbjct: 1 DNVNTARSIASKCGIIQPGDDGLVLEGKEFNQLIRDAEGEISQEKVDEVWPNLRVLARSS 180
Query: 759 PTDKHTLVKGIIDSTAGEQRQVVAVTGDGTNDGPALKK 796
P DK+ LVK IIDS R+VVAVTGDGTNDGPALKK
Sbjct: 181 PQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPALKK 294
>06342
Length = 2428
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 236/781 (30%), Positives = 357/781 (45%), Gaps = 59/781 (7%)
Frame = +2
Query: 206 IVVGDIAQIKYGDLLPADG--ILIQGNDLKIDESSLTGESDHVKKTLDKDP--------- 254
+V GDI ++ GD +PAD + I L+ID++ LTGES V K D P
Sbjct: 5 LVPGDIVEVSVGDKVPADIRILKIHSTTLRIDQAILTGESVSVMKHTDPIPDPRAVNQDK 184
Query: 255 --MLLSGTHVMEGSGRMVVTAVGVNSQTGIIFTLLGASXXXXXXXXXXXXXXQGAPENRN 312
+L SGT+V G + +V G+ ++ G I RN
Sbjct: 185 KNLLFSGTNVAAGKCKGLVIGTGLTTEIGKI---------------------------RN 283
Query: 313 KAKTQDGVALEIQPLNSQEGLDSEDKEKKIARIPKKEKSVLQGKLTRLAVQIGKAGLIMS 372
E +D+E +EK+ LQ KL + Q+ K I+
Sbjct: 284 ------------------EMMDTE-----------QEKTPLQQKLDEFSNQLSKVITIIC 376
Query: 373 VLTVVILILYFVVDNFVIQRREWLPECTPVYIQYFVKFFIIGVTVLVVAVPEGLPLAVTI 432
+ I I +F N W I+ + +F I V + V A+PEGLP +T
Sbjct: 377 IAVWAINIGHF---NDPAHGGSW--------IKGAIYYFKIAVALAVAAIPEGLPAVITT 523
Query: 433 SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGG---THYR 489
LA ++M K N +VR L + ET+G + ICSDKTGTLT N+M+V + +I T+
Sbjct: 524 CLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKLFIFSQIDTNQI 703
Query: 490 QIPQPDV----FPPKVLELIVNGISIN-------------CAYTSKIQPPEKEGGLP-RQ 531
+ Q +V + P EL NG + C + E +
Sbjct: 704 KTTQFEVTGSTYAPDG-ELYQNGKKVKASDYPGLEELCTICGMCNDSSVDYNEAKTQYEK 880
Query: 532 VGNKTECGLLGFVTDL-----------KQDYQAVRNEVPEEKLFKVYT--FNSVRKSMST 578
VG TE L L K++ V N V ++ K +T F+ RKSMS
Sbjct: 881 VGEATETALTVLAEKLNFYNTDKSSLNKREMGTVCNHVIQDMWRKEFTLEFSRDRKSMSV 1060
Query: 579 --VIRKPE---GGFRMFSKGASEIMLRRCDRILNKEGEIKSFRSKDRDNMVRNVIEPMAS 633
V KP GG RMF+KGA E +L RC + ++ + + M I
Sbjct: 1061FCVPNKPTRVPGGARMFAKGAPEGLLDRCTHVRIGNNKVPMSPAIKNEIMKLTKIYGTGR 1240
Query: 634 EGLRTICLAYRDFDGTEPSWDIEG-----EILTSLICIAVVGIEDPVRPEVPDAIAKCKR 688
+ LR + LA D D+E E T++ + VVG+ DP R EV +I C+
Sbjct: 1241DTLRCLALATIDNPPRREDMDLEDSRKFIEYETNMTFVGVVGMLDPPREEVMASIKNCRA 1420
Query: 689 AGITVRMVTGDNVNTARAIATKCGILTPKDDF--LCLEGKEFNSLIRNEKGEVEQEKLDK 746
AGI V ++TGDN TA AI + G+ + ++ L G+EF+ E+ E
Sbjct: 1421AGIRVIVITGDNKATAEAICRRIGVFSESENTEGLAYTGREFD--------ELPPEDQRA 1576
Query: 747 IWPKLRVLARSSPTDKHTLVKGIIDSTAGEQRQVVAVTGDGTNDGPALKKADVGFAMGIA 806
+ R+ AR P K +V+ + + ++ A+TGDG ND PALKKA++G AMG +
Sbjct: 1577AVMRARLFARVEPAHKSKIVEYL-----QAEGEISAMTGDGVNDAPALKKAEIGIAMG-S 1738
Query: 807 GTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACIT 866
GT VAK AS+++L DDNF++IV AV GR +Y+++ +F+++ ++ N+ V+ F A +
Sbjct: 1739GTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALG 1918
Query: 867 QDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLRRRPYGRNKPLISRTMMKNILGHAV 926
L VQ+LWVNL+ D F + AL PP ++++ P + LI+ + + +
Sbjct: 1919IPEALIPVQLLWVNLVTDGFPATALGFNPPDLDIMQKPPRNPREGLITGWLFFRYMAIGI 2098
Query: 927 Y 927
Y
Sbjct: 2099Y 2101
>29829
Length = 465
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/150 (76%), Positives = 131/150 (87%)
Frame = -3
Query: 799 VGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIV 858
+GFAMGI+GTDVAKEASDIILTDDNFTSIVKAV WGRNVYDSI+KFLQFQLTVNVVAV V
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 859 AFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLRRRPYGRNKPLISRTMM 918
AF GAC DSPL+A+QMLWVNLIMDT ASLALATE P+ LL+R+PYGR KPLIS+TM
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYGRTKPLISKTMF 101
Query: 919 KNILGHAVYQLLIVFLLVFAGDTLFDIDSG 948
KNI GH+VYQ++I+ +++F G LF ID G
Sbjct: 100 KNIAGHSVYQIIIILVILFKGADLFGIDDG 11
>00499
Length = 4026
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 269/541 (49%), Gaps = 60/541 (11%)
Frame = +2
Query: 425 GLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIG 484
GL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMTV +
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 181
Query: 485 G--------------THYRQIPQPDVFPPKVLELIVNGISINCAYTSKIQPPEKEGGLPR 530
G T+ R P + ++ +++ C + L R
Sbjct: 182 GRIVEADTSDDQSNATYSRSDPT---------WMALSRVAMLCNRAEFKGNQDNVPILKR 334
Query: 531 QV-GNKTECGLL-------GFVTDLKQDYQAVRNEVPEEKLFKVYTFNSVRKSMSTV--I 580
+ G+ +E LL G VT+ ++ RNE K+ ++ FNS K ++
Sbjct: 335 ECNGDASESALLKCVELSIGHVTEYRR-----RNE----KIVEI-PFNSSNKYQVSIHET 484
Query: 581 RKPEG-GFRMFSKGASEIMLRRCDRILNKEGEIKSFRSKDRDNMVRNVIEPMASEGLRTI 639
P+ + + KGA E ++ RC IL G+ + R+ +E + G R +
Sbjct: 485 EDPDDPRYLLVMKGAPERIMDRCSTIL-LNGKEQPLDDNFREAFNAAYLE-LGGLGERVL 658
Query: 640 --CLAYRDFDGTEPSWDIEGE----ILTSLICIAVVGIEDPVRPEVPDAIAKCKRAGITV 693
C + D P ++ + E +T L + ++ + DP R VPDA+ KC+ AGI V
Sbjct: 659 GFCDYFLPVDQFPPGYEFDPEGPNFPITGLRFVGLMAMIDPPRAAVPDAVGKCRSAGIKV 838
Query: 694 RMVTGDNVNTARAIATKCGILTPKDDFLCLEGKEFNSLIRNEKG---------------- 737
MVTGD+ TA+AIA GI++ EG + I +E+G
Sbjct: 839 IMVTGDHPITAKAIARGVGIIS--------EGSKTVEDIASERGIPVEEVDPREAKAAVI 994
Query: 738 ------EVEQEKLDKIWPKLR-----VLARSSPTDKHTLVKGIIDSTAGEQRQVVAVTGD 786
++ ++D+I LR V AR+SP K +V+G Q Q+VAVTGD
Sbjct: 995 HGGDLRDMTPAQIDEI---LRNHSEIVFARTSPQQKLIIVEG-----CQRQGQIVAVTGD 1150
Query: 787 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQ 846
G ND PALKKAD+G AMGIAG+DV+K+A+D+IL DDNF SIV V GR ++D++ K +
Sbjct: 1151GVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIA 1330
Query: 847 FQLTVNV--VAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLRRR 904
+ LT N+ ++ + F A I PL + +L ++L D +++LA E +++R+
Sbjct: 1331YTLTSNIPEISPFLLFILADIPL--PLGTITILCIDLGTDMVPAISLAYEKAENDIMKRQ 1504
Query: 905 P 905
P
Sbjct: 1505P 1507
>21541
Length = 445
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 88/123 (71%)
Frame = +3
Query: 168 FNDWSKEKQFRGLQSRIELEQKFSIIRNGQLIQLPVAEIVVGDIAQIKYGDLLPADGILI 227
FNDWSKEKQFRGLQS+IE E +F++IRNG+L Q+PV EI+VG+I QIKYGDLLPADG++I
Sbjct: 60 FNDWSKEKQFRGLQSKIEHEHRFTVIRNGELHQIPVGEILVGEICQIKYGDLLPADGVII 239
Query: 228 QGNDLKIDESSLTGESDHVKKTLDKDPMLLSGTHVMEGSGRMVVTAVGVNSQTGIIFTLL 287
Q NDLK + +K + P G +MVVTAVGVNSQTGIIF LL
Sbjct: 240 QSNDLKNRREFVNRRVGPCEKGRGQGPHAFVRHPCNGGQWKMVVTAVGVNSQTGIIFALL 419
Query: 288 GAS 290
GAS
Sbjct: 420 GAS 428
>36566
Length = 589
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 100/147 (68%)
Frame = +3
Query: 780 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 839
VV +TGDG ND ALK A++G +MG++GTDV+KEASD+IL DD+FT+I+ A+ G+ ++
Sbjct: 126 VVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDDFTTILNAIEEGKGIFY 305
Query: 840 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTES 899
+I F++FQL+ ++ A+ + + +PL A+Q+LW+N+IMD + +L EP
Sbjct: 306 NIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIMDGPPAQSLGVEPVDHD 485
Query: 900 LLRRRPYGRNKPLISRTMMKNILGHAV 926
++++ P P+I+R ++ N+L A+
Sbjct: 486 VIKQPPRHVGDPIITRRLIINVLSSAL 566
>35407
Length = 562
Score = 110 bits (276), Expect(2) = 2e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 83/158 (52%), Gaps = 1/158 (0%)
Frame = +1
Query: 57 RLKTSPIEGLSGNPADLEKRRLVFGKNVIPPKRPKTFLELVWEALQDVTXXXXXXXXXXX 116
+LKTSP EGL G+ E+ R +G NVIPPK PK+FL LVWEALQDVT
Sbjct: 91 KLKTSPTEGLVGDLGKEERVRF-YGSNVIPPKPPKSFLRLVWEALQDVTLLILIVAAIIS 267
Query: 117 XXXXFYR-PPGGDNEICGHIASSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNDWSKEK 175
FY+ D + FNDWSKEK
Sbjct: 268 LGLSFYKGDEEEDETEDESYRAKADSSLEEKVGWIDGLAILVAVAVVVLVTAFNDWSKEK 447
Query: 176 QFRGLQSRIELEQKFSIIRNGQLIQLPVAEIVVGDIAQ 213
QFRGLQS+IE E +F++IR+G+L Q+PV +I+VG+I Q
Sbjct: 448 QFRGLQSKIEHEHRFTVIRDGELHQIPVGDILVGEICQ 561
Score = 34.7 bits (78), Expect(2) = 2e-28, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 28 DLRKLMELRGADAVAQISAHYGGVQEICTRLKTSPIEG 65
+LR+LME R +A I+ YGGV E+C K P++
Sbjct: 5 ELRELMEHRSHEAYNIIATKYGGVLEMCKS*KRHPLKA 118
>08160
Length = 459
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +2
Query: 425 GLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIG 484
GL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMTV +
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 181
Query: 485 G 485
G
Sbjct: 182 G 184
>28890
Length = 552
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Frame = -3
Query: 168 FNDWSKEKQFRGLQSRIELEQKFSII-RNGQLIQLPVAEIVVGDIAQIKYGDLLPADGIL 226
F+ + + K + + S L +F+++ R Q + + E+VVGDI + K+GD +PAD +
Sbjct: 538 FSYYQEAKSSKIMDSFKNLVPQFAVVVRGDQKLSVKAEELVVGDIVECKFGDRVPADLRV 359
Query: 227 IQGNDLKIDESSLTGESDHVKKT--------LDKDPMLLSGTHVMEGSGRMVVTAVGVNS 278
I + K+D SSLTGES+ ++ L+ + T+ +EG+ R +V G ++
Sbjct: 358 ISAHGFKVDNSSLTGESEPQSRSAEFTHENPLETRNICFFSTNAVEGTCRGIVIKTGDDT 179
Query: 279 QTGIIFTL 286
G I L
Sbjct: 178 VMGRIANL 155
>14773
Length = 794
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 63/117 (53%)
Frame = +2
Query: 808 TDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQ 867
+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+ +
Sbjct: 2 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGT 181
Query: 868 DSPLKAVQMLWVNLIMDTFASLALATEPPTESLLRRRPYGRNKPLISRTMMKNILGH 924
PL + +L+++L D +++LA E +++R P + L++ ++ G
Sbjct: 182 PLPLGVITILFIDLGTDMVPAISLAYEMAESDIMKRPPRTISDRLVNERLIAMSYGQ 352
>04985
Length = 1671
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Frame = -1
Query: 742 EKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTAGEQRQVVAVTGDGTNDGPALKKADVGF 801
E L K+ + V AR +P K L++ + +V + GDG ND ALK A G
Sbjct: 1641 ELLPKVCTQGTVFARMAPDQKCALIENL-----QSYDYIVGMCGDGANDCEALKAAHAGI 1477
Query: 802 AMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV---------YDSISKFLQFQLTVN 852
++ A VA + I +N +V A+ GR Y ++ F+QF
Sbjct: 1476 SLSEAEASVAAPFTSRI---NNIECVVTAMREGRAALVTSFGCFKYMALYSFIQF----- 1321
Query: 853 VVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLRRRPYGRNKPL 912
++V++ +T C T S L + L+++LI+ T ++ L + L+R +P L
Sbjct: 1320 -ISVLILYT--CQTNLSDL---EFLYIDLIITTTIAVLLGYTGAYDKLVRHKPPDSLMKL 1159
Query: 913 --ISRTMMKNILGHAVYQLLIVFLL 935
I +M+ L A YQL +F L
Sbjct: 1158 SNIISILMQVTLT-AAYQLSTLFYL 1087
>33697
Length = 310
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = -2
Query: 649 TEPSWDIEGEILTSLICIAVVGIEDPVRPEVPDAIAKCKRAGITVRMVTGDNVNTARA 706
T PS D S+I DP R VPDA+ KC+ AGI V MVTGD+ T++
Sbjct: 243 TSPSLDSASSASWSMI--------DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITSQG 94
>13525
Length = 645
Score = 42.7 bits (99), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 437 SVKKMMKDNNLVRHLDACETMGNATAICSDKTG 469
+ K+M + N LV++L+A ET+G+ + ICSDKTG
Sbjct: 5 TAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 103
>14321
Length = 568
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +2
Query: 716 PKDDFLCLEGKEFNSLIRNEKGEVEQEKLDKIW-PKLRVLARSSPTDKHTLVKGIIDSTA 774
PK D LCL G+ L + + KL ++ P RV AR +P K ++ +
Sbjct: 173 PKYD-LCLTGESLTFL------QSDHPKLLRLLLPNTRVFARVAPKQKELII-----TVL 316
Query: 775 GEQRQVVAVTGDGTNDGPALKKADVGFAM 803
Q V + GDGTND ALK ADVG A+
Sbjct: 317 KAQGFVTLMCGDGTNDVGALKHADVGVAL 403
>07486
Length = 763
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 793 ALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGR 835
AL +ADVG A+G GTDVA EA+DI+L + + A+ R
Sbjct: 742 ALAQADVGIAIG-TGTDVAVEAADIVLMKSDLVDVYAAIKLSR 617
>32708
Length = 860
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 966 NTFV--LMQLFNEINARKIHGEKNVFAGVYRNIIFCTVVLGTFFCQIM 1011
NTF+ L+ L + R G+ NVFA + +FC++ +F Q++
Sbjct: 132 NTFISALLNLSDTNGLRSTGGDCNVFASAPLSFLFCSLAFNSFSQQVL 275
>26294
Length = 430
Score = 30.0 bits (66), Expect = 6.4, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 1016 GGKPFSCTSLTMEQWMWCLFIG 1037
GG P SC S ++ W WC +G
Sbjct: 98 GGSPQSCQSCCLDCWAWCCPLG 33
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|54873604|ref|NP_001003815.1| erythrocyte protein band
4.1-like 1 isoform b [Mus musculus]
(866 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00990 402 e-112
18811 191 1e-48
11374 186 3e-47
17332 152 8e-37
13951 64 3e-19
28244 78 1e-14
05888 54 2e-07
08363 37 0.024
03469 37 0.029
19662 30 3.6
17284 29 6.9
>00990
Length = 3161
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/365 (53%), Positives = 254/365 (69%), Gaps = 11/365 (3%)
Frame = +3
Query: 85 KSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTYCD 144
KSPQK + K V LLD E++++ G+ LFD VC+HL+L+EKDYFGL + D
Sbjct: 225 KSPQK-QRTGKGFNYEVVLLDGEHVNFELDRNAEGRELFDKVCQHLDLIEKDYFGLQFVD 401
Query: 145 ---ADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADII 201
++ K WL P K I KQ + PW F F +KFYPPDP QL E +TR+ + LQ R DI+
Sbjct: 402 ERISNHLKCWLSPDKRISKQKKGGPWLFDFALKFYPPDPTQLRESLTRWLVVLQTRRDIL 581
Query: 202 TGRLPCSFVTHALLGSYAVQAELGDYDAEEHVG-NYVSELRFAPNQTRELEERIMELHKT 260
+G+LP +++T A+LGSY VQA++GDYD EH G Y+ + FAPNQT +L E+I+ELH+
Sbjct: 582 SGKLPATYLTQAMLGSYCVQADVGDYDPNEHRGVEYIRDTPFAPNQTIDLLEKIVELHRQ 761
Query: 261 YRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFA 320
++G TP EAE +FLENAKKL+MYGVDLH A+D +DIMLGVCA+GL +YR++LRI+RF
Sbjct: 762 HKGQTPDEAETNFLENAKKLAMYGVDLHAAQDVNNVDIMLGVCASGLQVYREKLRISRFV 941
Query: 321 WPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPE 380
WPKILKISYKR FYIK+RP + E++ FKL HR AKRLWK+C+EHH FFRL E
Sbjct: 942 WPKILKISYKRRQFYIKVRPSDNSAMENSFCFKLATHRLAKRLWKICVEHHAFFRLREAE 1121
Query: 381 PPPKG--FLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTM-----SRSLDG 433
F +GSKFRYSGRT QTRQ+S ++DRP P+FERS R + + SLD
Sbjct: 1122QSQNAAMFPRLGSKFRYSGRTLYQTRQSSQILDRPNPYFERSQPARSSFAPPAKASSLDE 1301
Query: 434 EFSRP 438
+RP
Sbjct: 1302LSNRP 1316
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 803 GFSETRIEKRIIITG--DEDVDQDQALALAIKEAKLQHPDMLV 843
G TR+E +++++ DE+ D D ALA AI+ +PDM V
Sbjct: 2151 GIQHTRVEHKVVLSSADDEEFDYDAALADAIRSVTEFNPDMSV 2279
>18811
Length = 478
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 111/138 (80%)
Frame = -2
Query: 228 DAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDL 287
D H +Y+ ++ FAPNQ EL E+I+ELH+ ++G TP EAE+++LENAKKLSMYGVDL
Sbjct: 414 D*RHHGADYIKDIPFAPNQAPELLEKIVELHRQHKGQTPDEAEVNYLENAKKLSMYGVDL 235
Query: 288 HHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFE 347
H A+D +DIMLGVC++GL +YRD+LRI+RF WPKI+KISYKR +FY+K+RP + + E
Sbjct: 234 HAAQDVNNVDIMLGVCSSGLQVYRDKLRISRFVWPKIIKISYKRKHFYVKVRPADNKGLE 55
Query: 348 STIGFKLPNHRSAKRLWK 365
+++ F+LP HR AKRLWK
Sbjct: 54 TSVSFRLPTHRLAKRLWK 1
>11374
Length = 800
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 113/169 (66%), Gaps = 8/169 (4%)
Frame = +3
Query: 287 LHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQF 346
LH A+D +DIMLGVCA+GL +YR++LRI+RF WPKILKISYKR FYIK+RP +
Sbjct: 3 LHAAQDVNNVDIMLGVCASGLQVYREKLRISRFVWPKILKISYKRRQFYIKVRPSDNSAM 182
Query: 347 ESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKG--FLVMGSKFRYSGRTQAQTR 404
E++ FKL HR AKRLWK+C+EHH FFRL E F +GSKFRYSGRT QTR
Sbjct: 183 ENSFCFKLATHRLAKRLWKICVEHHAFFRLREAEQSQNAAMFPRLGSKFRYSGRTLYQTR 362
Query: 405 QASALIDRPAPFFERSSSKRYTM------SRSLDGEFSRPASVSENHDA 447
+S +DRP P+FERS R T SRS+D +RP ++ DA
Sbjct: 363 HSSQTLDRPDPYFERSQPARNTYAAPSTRSRSVDELTNRPDYWKDDLDA 509
>17332
Length = 473
Score = 152 bits (383), Expect = 8e-37, Method: Composition-based stats.
Identities = 75/157 (47%), Positives = 104/157 (66%), Gaps = 2/157 (1%)
Frame = +2
Query: 105 DASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTYCDADSQKNWLDPSKEIKKQIR- 163
D S+++ +V+ + +G +L + VCE LNL EKDYFGL + DA Q +WLD +K + Q++
Sbjct: 2 DDSDHQLQVKGNWKGILLQEKVCELLNLHEKDYFGLRFIDASGQTHWLDGNKSLSSQLKG 181
Query: 164 -SSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQA 222
+P F VKFY DP +L E+ITRY LQ++ DI+ GRLP +F + L +YAVQ+
Sbjct: 182 CQTPHKLYFGVKFYAADPCKLREEITRYLFFLQVKQDILQGRLPVTFDEASELCAYAVQS 361
Query: 223 ELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHK 259
ELGD+D +H YVSE F PNQT ELE R+ LH+
Sbjct: 362 ELGDFDPRQHTDGYVSEFCFIPNQTEELERRVAGLHR 472
>13951
Length = 720
Score = 63.9 bits (154), Expect(2) = 3e-19, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = -2
Query: 85 KSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTYCD 144
KSPQK + K V LLD E++++ G+ LFD VC+HL+L+EKDYFGL + D
Sbjct: 425 KSPQK-QRTGKGFNYEVVLLDGEHVNFELDRNAEGRELFDKVCQHLDLIEKDYFGLQFVD 249
Query: 145 ---ADSQKNWLDPSKEIKK 160
++ K WL P K I K
Sbjct: 248 ERISNHLKCWLSPDKRISK 192
Score = 50.4 bits (119), Expect(2) = 3e-19, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = -1
Query: 156 KEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADI 200
K+ + + + PW F F +KFYPPDP QL E +TR+ + L + ++
Sbjct: 204 KDFQNRKKGGPWLFDFALKFYPPDPTQLRESLTRWLVVLHVAGEL 70
>28244
Length = 422
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Frame = -1
Query: 308 LIYRDRLRINRFAWPKILKISYKRSNF-YIKIRPGEYEQFESTIG-FKLPNHRSAKRLWK 365
L++ +I F WPK+ ++ +K + + E Q + I F+L + ++ K LWK
Sbjct: 422 LVFEGNXKIGLFFWPKMTRLDFKGKKLTLVAVEDDENGQSQDHIFVFRLQSEKACKHLWK 243
Query: 366 VCIEHHTFFRLVSPEPPP---KGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSS 422
+EHH FFRL P P + F MGS+FRYSGRT+ QT + R + FER S
Sbjct: 242 CAVEHHAFFRLKGPVQGPNARQNFFRMGSRFRYSGRTEYQTSTMNRA--RRSVKFERKPS 69
Query: 423 KRYT 426
+RY+
Sbjct: 68 QRYS 57
>05888
Length = 490
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Frame = -2
Query: 389 MGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTM------SRSLDGEFSRPASVS 442
+GSKFRYSGRT Q R +S +DRP P+FERS R T SRS+D +RP
Sbjct: 489 LGSKFRYSGRTLYQARHSSQTLDRPDPYFERSQPARNTYAAPSTRSRSVDELTNRPDYWK 310
Query: 443 ENHDA 447
++ DA
Sbjct: 309 DDLDA 295
>08363
Length = 1878
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 803 GFSETRIEKRIIITG-DEDVDQDQALALAIKEAKLQHPDMLV 843
G ETR+E R++++ D+D D D ALA AI+ +PDM V
Sbjct: 337 GVQETRVEHRVVLSSTDDDFDYDAALADAIRSVTEFNPDMSV 462
>03469
Length = 1275
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -3
Query: 803 GFSETRIEKRIIITG-DEDVDQDQALALAIKEAKLQHPDMLV 843
G ETR+E R++++ D+D D D ALA AI+ +PDM V
Sbjct: 1093 GVQETRVEHRVVLSSTDDDFDYDAALADAIRSVTEFNPDMSV 968
>19662
Length = 698
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 374 FRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRS 430
FRL S P PKG L + SG T Q A L+ PF+ S + ++
Sbjct: 231 FRLRSSGPEPKGILHFSEHLQLSGETSVQYVAAMVLV----PFYPASMGSLFQXGKT 389
>17284
Length = 489
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 300 LGVCANGLLIYRDRLRINRFAWPKILKIS 328
L VC N ++ + L+I++ WPK+L +S
Sbjct: 75 LNVCLNSCVL*K*ILKIDKLRWPKVLTVS 161
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|134031994|ref|NP_032970.2| proteasome (prosome,
macropain) subunit, alpha type 2 [Mus musculus]
(234 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14551 396 e-111
28971 114 5e-52
02448 168 1e-42
24591 168 2e-42
00789 158 2e-39
20771 134 3e-32
17033 125 2e-29
04255 103 7e-23
19133 77 7e-15
37174 51 4e-07
11023 37 0.008
26690 30 1.2
>14551
Length = 1344
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/236 (79%), Positives = 213/236 (90%), Gaps = 2/236 (0%)
Frame = +3
Query: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER 60
M ER YSFSLTTFSPSGKLVQIEYALAAV GAPSVGIKA NGVVLATEKKQKS+ YDE
Sbjct: 141 MTER-YSFSLTTFSPSGKLVQIEYALAAVGAGAPSVGIKATNGVVLATEKKQKSVXYDEH 317
Query: 61 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQE 120
S++KVE ITK+IG+VYSGMGPDYRVL RARKLA+QY VY E IPTAQLVQRVA+VMQE
Sbjct: 318 SINKVETITKNIGIVYSGMGPDYRVLCRRARKLAEQYKRVYNEQIPTAQLVQRVAAVMQE 497
Query: 121 YTQSGGVRPFGVSLLICGWNEG--RPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRY 178
+TQSGGVRPFGVSLL+ GW+E +P+L+Q DPSGAYFAWKATAMGKN++NGKTFLEKRY
Sbjct: 498 FTQSGGVRPFGVSLLMAGWDEDDKKPFLYQCDPSGAYFAWKATAMGKNHINGKTFLEKRY 677
Query: 179 NEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVRDYLAAIA 234
+E LELEDA+HTAIL LKESFEGQMTEDNIE+GICN +GFRRL P+E++DYLA+++
Sbjct: 678 SETLELEDAVHTAILALKESFEGQMTEDNIEIGICNSSGFRRLEPSEIKDYLASVS 845
>28971
Length = 437
Score = 114 bits (285), Expect(2) = 5e-52, Method: Compositional matrix adjust.
Identities = 52/59 (88%), Positives = 54/59 (91%)
Frame = +1
Query: 118 MQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEK 176
MQEYTQSGGVRPFGVSLLICGW+ RPYL+QSDPSGAYFAWKATAMGKN VNGK FL K
Sbjct: 1 MQEYTQSGGVRPFGVSLLICGWDNERPYLYQSDPSGAYFAWKATAMGKNAVNGKNFLGK 177
Score = 107 bits (267), Expect(2) = 5e-52, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 56/64 (87%)
Frame = +2
Query: 170 GKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVRDY 229
KTFLEKRY+EDLELEDA+HTAILTLKE FEG+MT DNIEVGIC++ GF+RL P ++DY
Sbjct: 158 AKTFLEKRYSEDLELEDAVHTAILTLKEGFEGKMTSDNIEVGICDQNGFKRLDPATIKDY 337
Query: 230 LAAI 233
LA I
Sbjct: 338 LANI 349
>02448
Length = 1302
Score = 168 bits (426), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 138/233 (59%), Gaps = 3/233 (1%)
Frame = +2
Query: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER 60
M++R Y ++T FSP G L Q+EYA AV G+ +VG++ N VVL EKK + L +ER
Sbjct: 251 MSDR-YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGNNLVVLGVEKKAVAKLQEER 427
Query: 61 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQE 120
+V K+ + +H+ L ++G+ D R+L++RAR Q + L ++P+ + + +A + Q+
Sbjct: 428 TVRKIALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQK 607
Query: 121 YTQSGGVRPFGVSLLICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYN 179
YTQS G RPFG+S LI G++ +G P+L+Q+DPSG Y WKA +G+N + FLEK Y
Sbjct: 608 YTQSNGRRPFGLSSLIIGFDYDGSPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHYT 787
Query: 180 EDLELEDAIHTAILTLKESFE-GQMTEDNIEVGICNEA-GFRRLTPTEVRDYL 230
+++ D T L LK E Q N+EV + + L E+ Y+
Sbjct: 788 DEVAASDK-ETIKLALKALLEVVQSGAKNMEVAVMRRGQALQMLESDEIEKYI 943
>24591
Length = 1801
Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 138/233 (59%), Gaps = 3/233 (1%)
Frame = +1
Query: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER 60
M++R Y ++T FSP G L Q+EYA AV G+ +VG++ N VVL EKK + L +ER
Sbjct: 28 MSDR-YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGDNLVVLGVEKKAVAKLQEER 204
Query: 61 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQE 120
+V K+ + +H+ L ++G+ D R+L++RAR Q + L ++P+ + + +A + Q+
Sbjct: 205 TVRKIALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQK 384
Query: 121 YTQSGGVRPFGVSLLICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYN 179
YTQS G RPFG+S LI G++ +G P+L+Q+DPSG Y WKA +G+N + FLEK Y
Sbjct: 385 YTQSNGRRPFGLSSLIIGFDYDGTPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHYT 564
Query: 180 EDLELEDAIHTAILTLKESFE-GQMTEDNIEVGICNEA-GFRRLTPTEVRDYL 230
+++ D T L LK E Q N+EV + + L E+ Y+
Sbjct: 565 DEVAASDK-ETIKLALKALLEVVQSGAKNMEVAVMRRGQALQMLESDEIEKYI 720
>00789
Length = 1584
Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 126/212 (59%), Gaps = 4/212 (1%)
Frame = +1
Query: 4 RGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERS-V 62
R Y T FSP G+L Q+EYA+ A+ +GI A +G+VLA E++ + L DE S
Sbjct: 28 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILAKDGIVLAAERRNTNKLLDEVSYS 207
Query: 63 HKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYT 122
K+ ++ + +G+ D VL + R +AQ+Y L YQEPIP Q+V + + Q YT
Sbjct: 208 EKIYRLSDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQVVATLCDIKQAYT 387
Query: 123 QSGGVRPFGVSLLICGWNEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNED 181
Q GG RPFGVS+L GW++ + L+QSDPSG Y WKAT +G N N + L++ Y ED
Sbjct: 388 QFGGKRPFGVSILYMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSANAVSLLKQEYKED 567
Query: 182 -LELEDAIHTAILTLKESFE-GQMTEDNIEVG 211
L++A+ +I L ++ + ++T D +E+
Sbjct: 568 ESSLDEALALSIKVLGKTLDLTKLTPDKVEMA 663
>20771
Length = 674
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Frame = +2
Query: 6 YSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKV 65
Y + TFSP G+L Q+EYA+ A+ G+ ++GI+ GVVLA EK+ S L + S+ K+
Sbjct: 101 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTNEGVVLAVEKRVTSSLIEPTSIEKI 280
Query: 66 EPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQS- 124
+ KHIG SG+ D R L+ RAR AQ ++ Y E + + Q V+++ +
Sbjct: 281 MEVDKHIGCAMSGLIADSRTLIDRARVEAQNHWFTYNENMSVESVTQAVSNLALAFGDDD 460
Query: 125 ---GGV-RPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNE 180
G + RPFGV+LLI G + P LF DPSG + + A A+G + L+++Y++
Sbjct: 461 PDPGAMSRPFGVALLIAGVDSNGPRLFHMDPSGTFIQYDAKAIGSGSEGAQQALQEQYHK 640
Query: 181 DLELEDAIHTA 191
+ L+DA +A
Sbjct: 641 SITLKDACKSA 673
>17033
Length = 2217
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 102/184 (55%)
Frame = -3
Query: 5 GYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHK 64
GY S + FSP G++ Q+EYA AV ++GI+ +GVV+ EK S LY++ + +
Sbjct: 2152 GYDLSASHFSPDGRVFQVEYAQKAVENSGTAIGIRGKDGVVMGVEKLVTSKLYEQGANKR 1973
Query: 65 VEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQS 124
+ I +HIG +G+ D R L+ RA++ + Y Y P+P L RVA + YT
Sbjct: 1972 LFNIDRHIGGAVAGLLADARQLMERAKEESSNYRFNYGSPVPLKYLTDRVAGYVHAYTLH 1793
Query: 125 GGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLEL 184
VRPFG S+++ ++ P +F +PSG + + A+GK KT +EK +DL +
Sbjct: 1792 SAVRPFGTSMIVASYDAVGPQMFLVEPSGVSWGYYGCAIGKAKQTAKTEIEKLKMKDLTM 1613
Query: 185 EDAI 188
+D +
Sbjct: 1612 QDLV 1601
>04255
Length = 1758
Score = 103 bits (256), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 9/240 (3%)
Frame = -2
Query: 4 RGYSFSLTTFSPSGKLVQIEYALAAVAGGAPS----VGIKAANGVVLATEKKQKSILYDE 59
RG S LT S QI + + G P G + +K L D
Sbjct: 1622 RGSSAGLTVSLQSFS*RQIVSSRVCLQGYQPGRTDFCGCQRKRQRCYCHTEKVPDKLLDP 1443
Query: 60 RSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQ 119
+V + +T+ IG V +GM D + V RAR A ++ Y IP L +R+A++ Q
Sbjct: 1442 TTVTHLYSLTERIGCVMTGMIADSQSQVQRARYEAAKWKYTYGYDIPVDMLCKRIANINQ 1263
Query: 120 EYTQSGGVRPFGVSLLICGWNEGR-PYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRY 178
YTQS +RP G +++ G+++ + P ++++DP+G Y +KAT+ G + FLEK+
Sbjct: 1262 VYTQSAEMRPLGCCMILIGYDDEKGPEVYKTDPAGYYCGFKATSAGSKQLEANGFLEKKI 1083
Query: 179 --NEDLELEDAIHTAILTLKESFEGQMTEDNIEVGIC--NEAGFRRLTPTEVRDYLAAIA 234
+D +A AI L +EVGI + FR LT ++ +L AIA
Sbjct: 1082 KKKQDFTYNEAAEIAITCLSTVLSADFKASEVEVGIVTKDNPNFRILTEADIDVHLTAIA 903
>19133
Length = 692
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Frame = +1
Query: 82 DYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNE 141
D R+L + + YQ+P+P ++LV + + +Q T G RPFGV LLI G++
Sbjct: 10 DARLLCNFMQTECLDSRWAYQQPLPVSRLVSAIGNKLQIPTHRYGRRPFGVGLLIAGYDW 189
Query: 142 GRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNE--DLELEDAIHTAILTLKESF 199
P+++Q+ PS Y+ KA A+G + +T+LE+ ++ L++ + + L+++
Sbjct: 190 SGPHIYQTCPSANYYDCKAMAIGARSQSARTYLERHLDQFPQCSLDELVKHGLRALRDTL 369
Query: 200 EGQMT--EDNIEVGICN-EAGFRRLTPTEVRDYLAAI 233
++T N +GI + + F+ V YLA I
Sbjct: 370 PSEVTLSTKNCSLGIVDKDMKFKIYDDENVASYLALI 480
>37174
Length = 146
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1
Query: 15 PSGKLVQIEYALAAVAGGAPSVGIKAANGVVL 46
P+ +LVQIEYALAAV GAP VGIKA NGVVL
Sbjct: 43 PTAQLVQIEYALAAVGAGAPVVGIKATNGVVL 138
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 92 KLAQQYYLVYQEPIPTAQLVQ 112
KLA+QY VY E IPTAQLVQ
Sbjct: 1 KLAEQYKRVYNEQIPTAQLVQ 63
>11023
Length = 1057
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = -2
Query: 134 LLICGWNEGR-PYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKR 177
+++ G+++ + P ++++DP+G Y +KAT+ G + FLEKR
Sbjct: 996 MILIGYDDEKGPEVYKTDPAGYYCGFKATSAGSKQLEANGFLEKR 862
>26690
Length = 450
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 159 KATAMGKNYVNGKT-FLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICN 214
K + K+ V GK+ LE+ LEL AI +++ G+MT +I GICN
Sbjct: 65 KVRSCYKDVVKGKSDLLEQDRRTMLELGVVTQPAITINNQTYRGEMTGFDIFKGICN 235
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|22550094|ref|NP_032950.1| protein kinase, cAMP
dependent regulatory, type II alpha [Mus musculus]
(402 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08195 398 e-111
27710 132 2e-31
18204 91 7e-19
20517 46 2e-05
27853 34 0.095
27148 29 2.7
>08195
Length = 2165
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 259/396 (65%), Gaps = 2/396 (0%)
Frame = -3
Query: 6 IPAGLTELLQGYTVEVLRQQPPDLVDFAVEYFTRLREARRQESDTFIVSPTTFHTQESSA 65
IP GLTELLQ +TV LR++P DLVDFA YF RLR D + +Q S
Sbjct: 2019 IPPGLTELLQEFTVAALRERPSDLVDFAASYFNRLRLLNGDAVDPKCFTGGVRFSQTGSH 1840
Query: 66 VPVIXXXXXXXXXXXXXXXXVPVPSKFTR--RVSVCAETFXXXXXXXXXXXRVVHPKTDE 123
+ P PS R R SV AE + ++V+PK+D
Sbjct: 1839 ILAHNGTFAQNNSDDDEAMLEPPPSNTARFRRKSVSAEAYNPETDEDGGEAKIVNPKSDI 1660
Query: 124 QRCRLQEACKDILLFKNLDQEQLSQVLDAMFEKIVKTDEHVIDQGDDGDNFYVIERGTYD 183
QR RL + K+ILLF++LD EQ+ +VLDAMFEK V+ EH+IDQGDDGDNFYVI+ GTYD
Sbjct: 1659 QRQRLADVVKNILLFRSLDPEQMQEVLDAMFEKSVQPGEHIIDQGDDGDNFYVIDSGTYD 1480
Query: 184 ILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIIATSEGSLWGLDRVTFRRIIVKNN 243
I V + Q + VG YDN G FGELALMYN PRAATIIA+S G++W LDR TFRRI++K
Sbjct: 1479 IYVDVEGQAKLVGNYDNSGFFGELALMYNMPRAATIIASSTGTIWALDRTTFRRIVLKTA 1300
Query: 244 AKKRKMFESFIESVPLFKSLEMSERMKIVDVIGEKIYKDGERIIAQGEKADSFYIIESGE 303
+KRK +ES +ESVPL KSL++ ERM + D + + Y+DG +II QG+ AD Y +ESG+
Sbjct: 1299 FQKRKKYESLLESVPLLKSLDLYERMNVADALQTRTYEDGVQIIKQGDAADVMYFVESGQ 1120
Query: 304 VSILIRSKTKSNKNGGNQEVEIAHCHKGQYFGELALVTNKPRAASAYAVGDVKCLVMDVQ 363
V I + +K ++ + G E ++ KG YFGELAL+T++PRAASAYA G VKC V+DV
Sbjct: 1119 VRIAMTNKESTDPSAG--ETDVTVLEKGGYFGELALITHQPRAASAYAQGTVKCAVLDVH 946
Query: 364 AFERLLGPCMDIMKRNISHYEEQLVKMFGSNLDLMD 399
AFERL+GPCMD++KRNI Y+ Q+ +FG ++ + D
Sbjct: 945 AFERLMGPCMDVLKRNIDDYDSQISSIFGKSVSMKD 838
>27710
Length = 429
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 93/146 (63%)
Frame = +2
Query: 162 EHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIIA 221
E++I QGD+GDNFYVI+ G D+ V + V GSFGELAL+Y TPRAAT+ A
Sbjct: 2 ENIIQQGDEGDNFYVIDVGEVDVFV----NSELVTTISEGGSFGELALIYGTPRAATVRA 169
Query: 222 TSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLFKSLEMSERMKIVDVIGEKIYK 281
S+ LWG+DR ++RRI++ + +KRKM+E F+ V + +SL+ ER+ + D + +
Sbjct: 170 KSDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRVSILESLDKWERLTVADSLETCAFD 349
Query: 282 DGERIIAQGEKADSFYIIESGEVSIL 307
DGE I+ QG D FYII G +L
Sbjct: 350 DGETIVKQGAAGDDFYIILEGCAVVL 427
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%)
Frame = +2
Query: 284 ERIIAQGEKADSFYIIESGEVSILIRSKTKSNKNGGNQEVEIAHCHKGQYFGELALVTNK 343
E II QG++ D+FY+I+ GEV + + S+ + +G FGELAL+
Sbjct: 2 ENIIQQGDEGDNFYVIDVGEVDVFVNSEL------------VTTISEGGSFGELALIYGT 145
Query: 344 PRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKM 390
PRAA+ A DVK +D ++ R+L M R YEE L ++
Sbjct: 146 PRAATVRAKSDVKLWGIDRDSYRRIL---MGSTIRKRKMYEEFLSRV 277
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 115 RVVHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFEKIVKTDEHVIDQGDDGDNF 174
R++ T +R +E + + ++LD+ + V D++ E ++ QG GD+F
Sbjct: 215 RILMGSTIRKRKMYEEFLSRVSILESLDKWERLTVADSLETCAFDDGETIVKQGAAGDDF 394
Query: 175 YVIERGTYDIL 185
Y+I G +L
Sbjct: 395 YIILEGCAVVL 427
>18204
Length = 429
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Frame = -1
Query: 203 SFGELALMYNTPRAATIIATSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLFKS 262
+FGELA++YN R A++ A ++ +W LDR F+ I++K ++R+ F++SV + +
Sbjct: 429 AFGELAILYNCTRTASVKAVTDVKVWVLDRQMFQAIMMKTGLQRREENIRFLKSVSVLRD 250
Query: 263 LEMSERMKIVDVIGEKIYKDGERIIAQGEKADSFYIIESGEVSILIRSKTKSNKNGGNQE 322
L + KI DV+ + +GE II +G D+F++I GEV + + G++E
Sbjct: 249 LPSDKLAKIADVLEIDFFHEGEFIIREGCTGDTFFLINKGEVRV-------TQTVAGHEE 91
Query: 323 -VEIAHCHKGQYFGELALVTNKPRAASAYA 351
EI +G YFGE AL+ R AS A
Sbjct: 90 PQEIRKLKRGDYFGEKALLGEDRRTASCIA 1
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = -1
Query: 334 FGELALVTNKPRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQL 387
FGELA++ N R AS AV DVK V+D Q F+ ++ MK + EE +
Sbjct: 426 FGELAILYNCTRTASVKAVTDVKVWVLDRQMFQAIM------MKTGLQRREENI 283
>20517
Length = 749
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Frame = +3
Query: 169 DDGDNFYVIERGTYDILVTK----DNQTRSVGQYDNRGSFGELALMYNTPRAATIIATSE 224
D +FY I GT ++VT+ + TR++ D SFGELA++ + R AT+ +E
Sbjct: 6 DPPRSFYFILSGT--VVVTQFERQYSTTRTLVTLDQGMSFGELAVITGSRRQATVSTMTE 179
Query: 225 GSLWGLDRVTFRRIIVKNNAKKRKMF-----ESFIESVPLFKSLEMSERMKIVDVIGEKI 279
L + F I + A RK+ F+ SV K+ + + +
Sbjct: 180 VELLCISAKDFEDIFM---AGGRKIITDPDHNKFLRSVDFLKAWPVQQLAQHPHACMFHY 350
Query: 280 YKDGERIIAQGEKADSFYIIESGEVSIL--IRSKTKSNKNGGNQEVEIAHCHKGQ 332
+ G+ ++ +D YI++SG +S++ + T ++++ + E+A K +
Sbjct: 351 FNRGQVLVRDSNNSDWIYIVKSGSLSVMKKLHHATATDRHSTEGKSEVAEASKSK 515
>27853
Length = 864
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Frame = +2
Query: 278 KIYKDGERIIAQGEKADSFYIIESGEVSILIRSKTKSNKNGGNQEVEIAHCHKGQYFGEL 337
++ + G+ + QG+ +DS YI+ +G R ++ GG +EV + +G+ G +
Sbjct: 227 QMTEAGKALFRQGDNSDSVYIVLTG------RLRSVITLLGGKKEV-VGEYGRGELVGIV 385
Query: 338 ALVTNKPRAASAYAVGDVKC 357
++T+ RA + A+ D +
Sbjct: 386 EVLTHTERATTNMAIRDTEV 445
>27148
Length = 718
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = -3
Query: 198 YDNRG-SFGELALMYNTPRAATIIA 221
Y NRG SFGELA+M T R +T+I+
Sbjct: 293 YYNRGDSFGELAIMNATRRQSTVIS 219
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|56699478|ref|NP_796210.2| plasma membrane calcium
ATPase 3 [Mus musculus]
(1220 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12151 270 e-111
06342 258 1e-68
29829 219 5e-57
00499 207 3e-53
35407 130 3e-30
21541 127 2e-29
36566 127 3e-29
08160 64 3e-10
14773 58 2e-08
04985 54 4e-07
28890 50 5e-06
13525 43 8e-04
33697 40 0.004
07486 39 0.018
14321 37 0.056
>12151
Length = 880
Score = 270 bits (691), Expect(2) = e-111, Method: Compositional matrix adjust.
Identities = 145/198 (73%), Positives = 163/198 (82%), Gaps = 4/198 (2%)
Frame = +3
Query: 803 KKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVV 862
+KADVGFAMGI+GTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSI+KFLQFQLTVNVV
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 863 AVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGRDKPLIS 922
AV VAF GAC DSPLKA+QMLWVNLIMDT ASLALATE P+ LL R+PYGR KPLIS
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPYGRTKPLIS 647
Query: 923 RTMMKNILGHAVYQLTIIFTLLFVG-ELFFDID---SGRNAPLHSPPSEHYTIIFNTFVM 978
+TM KNILGHA YQ+ +I LLF G + +D + R P P ++H+TIIFN FVM
Sbjct: 648 KTMWKNILGHAFYQILVILLLLFQGAKAVWDRRWHPTSRETP--RPTNQHFTIIFNAFVM 821
Query: 979 MQLFNEINARKIHGERNV 996
M LFNE+NARKIH +RN+
Sbjct: 822 MTLFNEVNARKIHDQRNI 875
Score = 152 bits (384), Expect(2) = e-111, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 84/98 (85%)
Frame = +1
Query: 707 DNINTARAIAAKCGIIQPGEDFLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSS 766
DN+NTAR+IA+KCGIIQPG+D L LEGKEFN+ IR+ +GEI QE++D+VWP LRVLARSS
Sbjct: 1 DNVNTARSIASKCGIIQPGDDGLVLEGKEFNQLIRDAEGEISQEKVDEVWPNLRVLARSS 180
Query: 767 PTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKK 804
P DK+ LVK IIDS R+VVAVTGDGTNDGPALKK
Sbjct: 181 PQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPALKK 294
>06342
Length = 2428
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 232/796 (29%), Positives = 362/796 (45%), Gaps = 74/796 (9%)
Frame = +2
Query: 214 GDIAQVKYGDLLPADGVL--IQGNDLKIDESSLTGESDHVRKSADKDP-----------M 260
GDI +V GD +PAD + I L+ID++ LTGES V K D P +
Sbjct: 14 GDIVEVSVGDKVPADIRILKIHSTTLRIDQAILTGESVSVMKHTDPIPDPRAVNQDKKNL 193
Query: 261 LLSGTHVMEGSGRMVVTAVGVNSQTGIIFTLLXXXXXXXXXXXXXXXXXXXXMDSSQTRA 320
L SGT+V G + +V G+ ++ G I + MD+ Q +
Sbjct: 194 LFSGTNVAAGKCKGLVIGTGLTTEIGKIRNEM--------------------MDTEQEK- 310
Query: 321 KKQDGAVAMEMQPLKSAXXXXXXXXXXXXXXXXXXXXSVLQGKLTKLAVQIGKAGLVMSA 380
+ LQ KL + + Q+ K
Sbjct: 311 -------------------------------------TPLQQKLDEFSNQLSKV------ 361
Query: 381 ITVIILVLYFVIETFVVD---GRVWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAV 437
IT+I + ++ + D G W ++ + +F I V + V A+PEGLP +
Sbjct: 362 ITIICIAVWAINIGHFNDPAHGGSW--------IKGAIYYFKIAVALAVAAIPEGLPAVI 517
Query: 438 TISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYL------- 490
T LA ++M K N +VR L + ET+G + ICSDKTGTLTTN+M+V + ++
Sbjct: 518 TTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKLFIFSQIDTN 697
Query: 491 -----------------GDTHYKEIPAPSALTPKILDLLV-------HAISINSAYTTKI 526
G+ + ++ P + +L ++ N A T
Sbjct: 698 QIKTTQFEVTGSTYAPDGELYQNGKKVKASDYPGLEELCTICGMCNDSSVDYNEAKTQY- 874
Query: 527 LPPEKEGALPRQVGNKTECALLGFVLDL-----------KRDFQPVREQIPEDQLYKVYT 575
+VG TE AL L KR+ V + +D K +T
Sbjct: 875 ----------EKVGEATETALTVLAEKLNFYNTDKSSLNKREMGTVCNHVIQDMWRKEFT 1024
Query: 576 --FNSVRKSMSTV------IRMPDGGFRLFSKGASEILLKKCTNILNSNGELRGFRPRDR 627
F+ RKSMS R+P GG R+F+KGA E LL +CT++ N ++ P +
Sbjct: 1025LEFSRDRKSMSVFCVPNKPTRVP-GGARMFAKGAPEGLLDRCTHVRIGNNKVP-MSPAIK 1198
Query: 628 DDMVKKI-IEPMACDGLRTICIAYRDFSAIQEPDWDNEN-----EVVGDLTCIAVVGIED 681
++++K I D LR + +A D +E D D E+ E ++T + VVG+ D
Sbjct: 1199NEIMKLTKIYGTGRDTLRCLALATIDNPPRRE-DMDLEDSRKFIEYETNMTFVGVVGMLD 1375
Query: 682 PVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDF--LCLEGKEFNRR 739
P R EV +I+ C+ AGI V ++TGDN TA AI + G+ E+ L G+EF+
Sbjct: 1376PPREEVMASIKNCRAAGIRVIVITGDNKATAEAICRRIGVFSESENTEGLAYTGREFD-- 1549
Query: 740 IRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDG 799
E+ E + R+ AR P K +V+ + + ++ A+TGDG ND
Sbjct: 1550------ELPPEDQRAAVMRARLFARVEPAHKSKIVEYL-----QAEGEISAMTGDGVNDA 1696
Query: 800 PALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTV 859
PALKKA++G AMG +GT VAK AS+++L DDNF++IV AV GR +Y+++ +F+++ ++
Sbjct: 1697PALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISS 1873
Query: 860 NVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGRDKP 919
N+ V+ F A + L VQ+LWVNL+ D F + AL PP ++ + P +
Sbjct: 1874NIGEVVCIFLTAALGIPEALIPVQLLWVNLVTDGFPATALGFNPPDLDIMQKPPRNPREG 2053
Query: 920 LISRTMMKNILGHAVY 935
LI+ + + +Y
Sbjct: 2054LITGWLFFRYMAIGIY 2101
>29829
Length = 465
Score = 219 bits (559), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/150 (78%), Positives = 127/150 (84%)
Frame = -3
Query: 807 VGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIV 866
+GFAMGI+GTDVAKEASDIILTDDNFTSIVKAV WGRNVYDSI+KFLQFQLTVNVVAV V
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 867 AFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGRDKPLISRTMM 926
AF GAC DSPL+A+QMLWVNLIMDT ASLALATE P+ LL RKPYGR KPLIS+TM
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYGRTKPLISKTMF 101
Query: 927 KNILGHAVYQLTIIFTLLFVGELFFDIDSG 956
KNI GH+VYQ+ II +LF G F ID G
Sbjct: 100 KNIAGHSVYQIIIILVILFKGADLFGIDDG 11
>00499
Length = 4026
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 184/552 (33%), Positives = 276/552 (50%), Gaps = 43/552 (7%)
Frame = +2
Query: 432 GLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYL- 490
GL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMTV +
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 181
Query: 491 -----GDTHYKEIPAPSALT-PKILDLLVHAISINSAYTTKILPPEKEGALPRQV-GNKT 543
DT + A + + P + L A+ N A + L R+ G+ +
Sbjct: 182 GRIVEADTSDDQSNATYSRSDPTWMALSRVAMLCNRAEFKG--NQDNVPILKRECNGDAS 355
Query: 544 ECALL-------GFVLDLKRDFQPVREQIPEDQLYKVYTFNSVRKSMSTVIRMPDGG--- 593
E ALL G V + +R + + E IP FNS K ++ D
Sbjct: 356 ESALLKCVELSIGHVTEYRRRNEKIVE-IP---------FNSSNKYQVSIHETEDPDDPR 505
Query: 594 FRLFSKGASEILLKKCTNILNSNGELRGFRPRDRDDMVKKIIEPMACDGLRTICIAYRD- 652
+ L KGA E ++ +C+ IL NG+ + R+ +E GL + + D
Sbjct: 506 YLLVMKGAPERIMDRCSTIL-LNGKEQPLDDNFREAFNAAYLE---LGGLGERVLGFCDY 673
Query: 653 ------FSAIQEPDWDNENEVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTG 706
F E D + N + L + ++ + DP R VP+A+ KC+ AGI V MVTG
Sbjct: 674 FLPVDQFPPGYEFDPEGPNFPITGLRFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTG 853
Query: 707 DNINTARAIAAKCGIIQPG----EDFLCLEG---KEFNRRIRN----EKGEIEQERLDKV 755
D+ TA+AIA GII G ED G +E + R G++ ++
Sbjct: 854 DHPITAKAIARGVGIISEGSKTVEDIASERGIPVEEVDPREAKAAVIHGGDLRDMTPAQI 1033
Query: 756 WPKLR-----VLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKKADVGFA 810
LR V AR+SP K +V+G Q Q+VAVTGDG ND PALKKAD+G A
Sbjct: 1034DEILRNHSEIVFARTSPQQKLIIVEG-----CQRQGQIVAVTGDGVNDSPALKKADIGVA 1198
Query: 811 MGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNV--VAVIVAF 868
MGIAG+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+ ++ + F
Sbjct: 1199MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLLF 1378
Query: 869 TGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGRDKPLISRTMMKN 928
A I PL + +L ++L D +++LA E ++ R+P RD P+ + + +
Sbjct: 1379ILADIPL--PLGTITILCIDLGTDMVPAISLAYEKAENDIMKRQP--RD-PVKDKLVNER 1543
Query: 929 ILGHAVYQLTII 940
++ A Q+ +I
Sbjct: 1544LISMAYGQIGMI 1579
>35407
Length = 562
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Frame = +1
Query: 58 GLCRRLKTSPTEGLADNTNDLEKRRQIYGQNFIPPKQPKTFLQLVWEALQDVTLIILEVA 117
G ++LKTSPTEGL + E+R + YG N IPPK PK+FL+LVWEALQDVTL+IL VA
Sbjct: 79 GNVQKLKTSPTEGLVGDLGK-EERVRFYGSNVIPPKPPKSFLRLVWEALQDVTLLILIVA 255
Query: 118 AIVSLGLSFY-APPGEESEACGNVSXXXXXXXXXXXXXXXXXXILLSVICVVLVTAFNDW 176
AI+SLGLSFY E+ + IL++V VVLVTAFNDW
Sbjct: 256 AIISLGLSFYKGDEEEDETEDESYRAKADSSLEEKVGWIDGLAILVAVAVVVLVTAFNDW 435
Query: 177 SKEKQFRGLQSRIEQEQKFTVIRNGXXXXXXXXXXXXGDIAQ 218
SKEKQFRGLQS+IE E +FTVIR+G G+I Q
Sbjct: 436 SKEKQFRGLQSKIEHEHRFTVIRDGELHQIPVGDILVGEICQ 561
>21541
Length = 445
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 76/122 (62%)
Frame = +3
Query: 171 TAFNDWSKEKQFRGLQSRIEQEQKFTVIRNGXXXXXXXXXXXXGDIAQVKYGDLLPADGV 230
TAFNDWSKEKQFRGLQS+IE E +FTVIRNG G+I Q+KYGDLLPADGV
Sbjct: 54 TAFNDWSKEKQFRGLQSKIEHEHRFTVIRNGELHQIPVGEILVGEICQIKYGDLLPADGV 233
Query: 231 LIQGNDLKIDESSLTGESDHVRKSADKDPMLLSGTHVMEGSGRMVVTAVGVNSQTGIIFT 290
+IQ NDLK + K + P G +MVVTAVGVNSQTGIIF
Sbjct: 234 IIQSNDLKNRREFVNRRVGPCEKGRGQGPHAFVRHPCNGGQWKMVVTAVGVNSQTGIIFA 413
Query: 291 LL 292
LL
Sbjct: 414 LL 419
>36566
Length = 589
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 99/147 (67%)
Frame = +3
Query: 788 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 847
VV +TGDG ND ALK A++G +MG++GTDV+KEASD+IL DD+FT+I+ A+ G+ ++
Sbjct: 126 VVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDDFTTILNAIEEGKGIFY 305
Query: 848 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTES 907
+I F++FQL+ ++ A+ + + +PL A+Q+LW+N+IMD + +L EP
Sbjct: 306 NIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIMDGPPAQSLGVEPVDHD 485
Query: 908 LLLRKPYGRDKPLISRTMMKNILGHAV 934
++ + P P+I+R ++ N+L A+
Sbjct: 486 VIKQPPRHVGDPIITRRLIINVLSSAL 566
>08160
Length = 459
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +2
Query: 432 GLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYL 490
GL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMTV +
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWF 178
>14773
Length = 794
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Frame = +2
Query: 816 TDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQ 875
+DV+K+A+D+IL DDNF SIV V GR ++D++ K + + LT N+ +
Sbjct: 2 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGT 181
Query: 876 DSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKP 913
PL + +L+++L D +++LA E ++ R P
Sbjct: 182 PLPLGVITILFIDLGTDMVPAISLAYEMAESDIMKRPP 295
>04985
Length = 1671
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 19/228 (8%)
Frame = -1
Query: 750 ERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKKADVGF 809
E L KV + V AR +P K L++ + +V + GDG ND ALK A G
Sbjct: 1641 ELLPKVCTQGTVFARMAPDQKCALIENL-----QSYDYIVGMCGDGANDCEALKAAHAGI 1477
Query: 810 AMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV---------YDSISKFLQFQLTVN 860
++ A VA + I +N +V A+ GR Y ++ F+QF
Sbjct: 1476 SLSEAEASVAAPFTSRI---NNIECVVTAMREGRAALVTSFGCFKYMALYSFIQF----- 1321
Query: 861 VVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGRDKPL 920
++V++ +T C T S L + L+++LI+ T ++ L + L+ R KP
Sbjct: 1320 -ISVLILYT--CQTNLSDL---EFLYIDLIITTTIAVLLGYTGAYDKLV------RHKPP 1177
Query: 921 ISRTMMKNILG-------HAVYQLTIIFTLLFVGELFF---DIDSGRN 958
S + NI+ A YQL+ +F L +LF+ ++D R+
Sbjct: 1176 DSLMKLSNIISILMQVTLTAAYQLSTLFYLR--SQLFYQNQEVDPLRD 1039
>28890
Length = 552
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Frame = -3
Query: 214 GDIAQVKYGDLLPADGVLIQGNDLKIDESSLTGESDHVRKSAD---KDPM-----LLSGT 265
GDI + K+GD +PAD +I + K+D SSLTGES+ +SA+ ++P+ T
Sbjct: 412 GDIVECKFGDRVPADLRVISAHGFKVDNSSLTGESEPQSRSAEFTHENPLETRNICFFST 233
Query: 266 HVMEGSGRMVVTAVGVNSQTGIIFTL 291
+ +EG+ R +V G ++ G I L
Sbjct: 232 NAVEGTCRGIVIKTGDDTVMGRIANL 155
>13525
Length = 645
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 444 SVKKMMKDNNLVRHLDACETMGNATAICSDKTG 476
+ K+M + N LV++L+A ET+G+ + ICSDKTG
Sbjct: 5 TAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 103
>33697
Length = 310
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = -2
Query: 681 DPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFL 729
DP R VP+A+ KC+ AGI V MVTGD+ T++ G Q G D+L
Sbjct: 195 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITSQ------GHRQRGGDYL 67
>07486
Length = 763
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = -1
Query: 801 ALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRN 844
AL +ADVG A+G GTDVA EA+DI+L + + A+ R
Sbjct: 742 ALAQADVGIAIG-TGTDVAVEAADIVLMKSDLVDVYAAIKLSRK 614
>14321
Length = 568
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +2
Query: 757 PKLRVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKKADVGFAM 811
P RV AR +P K ++ + Q V + GDGTND ALK ADVG A+
Sbjct: 254 PNTRVFARVAPKQKELII-----TVLKAQGFVTLMCGDGTNDVGALKHADVGVAL 403
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6681159|ref|NP_031867.1| DEAD (Asp-Glu-Ala-Asp) box
polypeptide 6 [Mus musculus]
(483 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07310 399 e-111
01062 285 2e-77
09316 235 3e-62
02498 108 1e-48
00621 186 2e-47
00739 138 6e-33
00162 119 4e-32
09327 115 4e-26
04883 115 5e-26
01517 108 4e-24
22006 98 8e-21
02054 97 2e-20
08036 60 2e-19
14337 90 2e-18
19640 88 7e-18
31899 86 3e-17
34295 81 1e-15
12995 81 1e-15
19525 79 3e-15
11624 76 3e-14
00617 75 5e-14
19151 70 1e-12
17708 66 3e-11
11160 64 1e-10
30136 64 2e-10
17544 58 1e-08
33025 57 2e-08
10649 55 7e-08
39583 55 7e-08
31220 54 2e-07
33543 48 9e-06
19172 47 2e-05
12121 45 5e-05
03381 45 5e-05
11423 45 7e-05
06438 44 2e-04
34134 39 0.005
33083 38 0.011
28851 32 0.45
>07310
Length = 712
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/237 (78%), Positives = 215/237 (90%)
Frame = +2
Query: 225 RILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSV 284
RILDL+ K + K D ++VLDEADKLLSQDF ++++II LP RQILLYSATFPLSV
Sbjct: 2 RILDLMNKRLVKPDTCGILVLDEADKLLSQDFKGMLDNIIAHLPPQRQILLYSATFPLSV 181
Query: 285 QKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSS 344
++FM +L+ PYEINLMEELTLKGVTQYYA+V E+QKVHCLNTLFS+LQINQSIIFCNS+
Sbjct: 182 EQFMKKYLKNPYEINLMEELTLKGVTQYYAFVQEKQKVHCLNTLFSKLQINQSIIFCNST 361
Query: 345 QRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN 404
QRVELLAKKI++LGYSC+YIHAKM Q+HRNRVFHDFR GLCRNLVC+DLFTRGIDIQAVN
Sbjct: 362 QRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQAVN 541
Query: 405 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIP 461
VVINFDFPK AETYLHRIGRSGR+GHLG+AINLIT++DRF+L IE++LGTEIKPIP
Sbjct: 542 VVINFDFPKHAETYLHRIGRSGRYGHLGVAINLITFEDRFSLHKIEQELGTEIKPIP 712
>01062
Length = 2138
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 233/369 (63%), Gaps = 2/369 (0%)
Frame = -3
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
F++ ++ ELL GI+ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + I +L+
Sbjct: 2073 FDNMGIREELLRGIYAYGFEKPSAIQQRAVKPIVKGRDVIAQAQSGTGKTATFSISVLQC 1894
Query: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
LD++ QA+++ PTRELA Q+ ++ + + +M + + GGTN+ +DI +LD H
Sbjct: 1893 LDIQLRETQALILSPTRELATQIQKVMLALGDYMN-VQCHSCIGGTNIGEDIRKLDYGQH 1717
Query: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
+V TPGR+ D+IK+ + ++M++LDEAD++L++ F + + D+ LP Q++L S
Sbjct: 1716 IVSGTPGRVFDMIKRRNLRTRSIKMMILDEADEMLNKGFKEQIYDVYRYLPPATQVILIS 1537
Query: 278 ATFPLSVQKFMNSHLQKPYEINL-MEELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 335
AT P + + N + P I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 1536 ATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 1357
Query: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Q++IFCN+ ++V+ L +K+ + ++ +H M Q+ R + FR G R L+ TD++
Sbjct: 1356 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKEREAIMKVFRAGDSRVLITTDVWA 1177
Query: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGT 455
RGID+Q V++VIN+D P E Y+HRIGRSGRFG G+AIN + DD L+ IE+ T
Sbjct: 1176 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDIEQYYST 997
Query: 456 EIKPIPSNI 464
+I +P N+
Sbjct: 996 QIDEMPMNV 970
>09316
Length = 2312
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 216/385 (56%), Gaps = 5/385 (1%)
Frame = +2
Query: 91 TSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAY 150
S + F D+ LK ELL I + G+E PS +Q E IP A+ D+L +AK+G GK+ +
Sbjct: 830 VSIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVF 1009
Query: 151 LIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIM 210
++ L++L+ + +V+ TRELA Q+S+ + SK+M K+ GG +++ D
Sbjct: 1010 VLATLQQLEPVDGQVSVLVMAHTRELAFQISKEYERFSKYMNNVKIAVFFGGMSVKKDEE 1189
Query: 211 RLDDTV-HVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTLP 268
L H+V+ TPGR+ L K + ++ +LDE DK+L+ D + +++I P
Sbjct: 1190 VLSKNCPHIVVGTPGRLHALAKANNLNLKKIKHFILDECDKMLADLDMRRDVQEIFRLTP 1369
Query: 269 KNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEE--LTLKGVTQYYAYVTERQKVHCLN 326
+Q++++SAT ++ +Q P E+ + ++ LTL G+ Q+Y + + +K L
Sbjct: 1370 HEKQVMMFSATLSKEIRPICKKFMQDPMEVYVDDDSKLTLHGLQQHYCKLKDNEKNRKLF 1549
Query: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386
L L+ NQ IIF S R L++ + + + IH +M QE R + F++ R
Sbjct: 1550 ELLDVLEFNQVIIFVKSVPRCMALSQLLLEQNFPAIAIHRQMTQEERLSRYQQFKDFQKR 1729
Query: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT-YDDRFN 445
LV T+LF RG+DI+ VN+V N+D P+ ++TYLHR+ R+GRFG GLAI ++ +D
Sbjct: 1730 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKI 1909
Query: 446 LKSIEEQLGTEIKPIPSNIDKSLYV 470
L ++E+ I +P ID S Y+
Sbjct: 1910 LNDVQERFEVNITELPDEIDISSYI 1984
>02498
Length = 1955
Score = 108 bits (269), Expect(2) = 1e-48, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Frame = +1
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGR--DILARAKNGTGKSGAYLIPLL 155
FE LK +LL G+++MG+ PS IQE ++PI L+ +++A++++GTGK+ A+++ +L
Sbjct: 139 FEALNLKPQLLKGVYDMGFNAPSKIQETALPILLADPPVNMIAQSQSGTGKTAAFVLTML 318
Query: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNL-RDDIMRLDD 214
R+D+ + Q + + PT ELALQ+ ++ ++SKHM G ++ G + R +++
Sbjct: 319 SRVDISQTFPQCLCLAPTYELALQIGEVIEKMSKHMTGLEIRYAVRGERVNRGEVL---- 486
Query: 215 TVHVVIATPGRILDLIKKGVA-KVDHVQMIVLDEADKLLSQDFVQIMEDIILT-LPKNRQ 272
+ +VI TPG ++D + A ++ +++ VLDEAD ++S Q I L Q
Sbjct: 487 SEQIVIGTPGTVMDWSHRFKALPLEKLRVFVLDEADVMISMQGHQDQSTRIQKRLSSGCQ 666
Query: 273 ILLYSATFPLSVQKF 287
+LL+SAT+ V +F
Sbjct: 667 MLLFSATYDQVVMQF 711
Score = 103 bits (258), Expect(2) = 1e-48, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Frame = +3
Query: 291 HLQKPYEINL-MEELTLKGVTQYYAYV-TERQKVHCLNTLFSRLQINQSIIFCNSSQRVE 348
H Q P I+L EE +L + QYY ++ +K L ++ + + QS+IFC+
Sbjct: 723 HPQDPVIISLKREEESLDNIKQYYIDCNSQEEKYVALCNIYGSISVGQSMIFCHKRSTAA 902
Query: 349 LLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVIN 408
LA++++ ++ + ++ E R + FR G + L+ T++ RGID++ V VV+N
Sbjct: 903 WLAERMTADHHAVGLLTGELTIEQRAAIIKRFREGKEKVLITTNVSARGIDVEMVTVVVN 1082
Query: 409 FDFPKL------AETYLHRIGRSGRFGHLGLAINLITYDDRFN-LKSIEEQLGTEIKPI 460
FD P ETYLHRIGR+GRFG G+AIN++ ++SIE+ G +I+ +
Sbjct: 1083FDLPVTQDWRPDCETYLHRIGRTGRFGKNGIAINMVDNSRSMAIMRSIEKHFGRKIEKL 1259
>00621
Length = 2263
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 216/421 (51%), Gaps = 48/421 (11%)
Frame = +1
Query: 77 KLPPKDLRIKTSDVT-STKGNE-------FEDYCLKRELLMGIFEMGWEKPSPIQEESIP 128
++ +D RI D S KG +++ L +++ I +G+++P+PIQ ++IP
Sbjct: 172 EMAERDWRIFREDYNISCKGGRIPNPIRFWKESDLGADIMEVIDRVGYKEPTPIQMQAIP 351
Query: 129 IALSGRDILARAKNGTGKSGAYLIPLL---------ERLDLKKDNIQAMVIVPTRELALQ 179
I L RDI+ A+ G+GK+ A+LIPLL ERL+ A+++ PTRELA Q
Sbjct: 352 IGLQNRDIIGVAETGSGKTAAFLIPLLVWIQSLPKIERLEDADQGPYAVILAPTRELAQQ 531
Query: 180 VSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239
+ + + + +G +V++ GG + + +L VVIATPGR++D+++ ++
Sbjct: 532 IEEETRKFGEGLG-IRVVSVIGGISREEQGFKLQQGCEVVIATPGRMIDVLENRYLVLNQ 708
Query: 240 VQMIVLDEADKLLSQDFVQIMEDIILTLP-------------------------KNRQIL 274
+V+DEAD++++ F + I+ LP K RQ +
Sbjct: 709 CTYVVMDEADRMINMGFEPEVRKILDYLPVSNQKPDNDDAEDDLKMLQNFKSKHKYRQTV 888
Query: 275 LYSATFPLSVQKFMNSHLQKP---YEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSR 331
+++AT P V++ + L++P Y N+ + ++ V Q +TE +K L + +
Sbjct: 889 MFTATMPPQVERLARTFLRRPTVVYIGNVGK--PVERVEQIVYMLTESEKRKKLIEVLNA 1062
Query: 332 LQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCT 391
IIF N + ++LAK + ++G++ +H QE R + G +V T
Sbjct: 1063GVDPPIIIFVNQKKGADVLAKSLEKMGFNATTLHGGKGQEQREYALASLKGGAKDIMVAT 1242
Query: 392 DLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDR---FNLKS 448
D+ RGIDI+ V++V+N+D + E Y HRIGR+GR G G +I +T +D ++LK
Sbjct: 1243DVAGRGIDIKDVSLVLNYDMARTIEDYTHRIGRTGRAGKEGTSITFLTKEDSMVFYDLKQ 1422
Query: 449 I 449
+
Sbjct: 1423L 1425
>00739
Length = 1313
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 133/251 (52%), Gaps = 6/251 (2%)
Frame = +3
Query: 217 HVVIATPGRILDLIKK-GVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275
H+VI+TPGR+ D I + V+ +V+DEAD+LL +F +E I+ LP RQ LL
Sbjct: 45 HIVISTPGRLADHIDSCDTFSLKRVKFLVMDEADRLLDDNFGAQLEPILTRLPSARQTLL 224
Query: 276 YSATFPLSVQKFMNSHLQKPY-EINLMEELTLKGVTQYYAYVTERQK----VHCLNTLFS 330
+SAT +V +S L KP+ I E T+ + + Y V K VH L+
Sbjct: 225 FSATLSPTVNALRDSVLNKPFVWIQQSERATVDELQEDYVLVPASMKDAYMVHILDHWLK 404
Query: 331 RLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVC 390
+ IIF + + ++L + +L +SC +H+ + Q R F++ R L+
Sbjct: 405 DHPRSSLIIFTXTCKYAQILGMMLEKLQFSCAVLHSMIPQRFRLSSLSRFKSNQTRILIS 584
Query: 391 TDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIE 450
TD+ +RG+DI V+++IN + P Y+HR+GR+ R G G +I+L+T D +KSIE
Sbjct: 585 TDVASRGLDIPTVDLIINHNIPNRPRDYVHRVGRTARAGRCGQSISLVTEFDIKLIKSIE 764
Query: 451 EQLGTEIKPIP 461
+ ++ P
Sbjct: 765 SHINCQMTEHP 797
>00162
Length = 2322
Score = 119 bits (299), Expect(2) = 4e-32, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 11/313 (3%)
Frame = +3
Query: 165 IQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPG 224
++A++I PTRELA Q+ ++ ++ + + G R+ L ++VI T G
Sbjct: 138 MEALIITPTRELAFQIYEVLNKIRTFHDFSANLVIGGKFMWRET--HLMGKTNIVICTVG 311
Query: 225 RILDLIKKGVA-KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLS 283
R+L ++ A V ++++VLDEAD+++ F Q M+ I+ LP RQ LL+SAT +S
Sbjct: 312 RLLHHLESTQAFDVSELKVLVLDEADRIMDSKFAQDMDSIMSHLPP-RQTLLFSATQTMS 488
Query: 284 VQKFMNSHLQKPYEINL---MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIF 340
V+ L+ P +++ E +T G+ Q Y +K+ L + N+ ++F
Sbjct: 489 VKTLARLSLKDPSYVSVDRHAEYVTPTGLEQSYIVCELHEKLSLLYSFLKNHPNNKIMVF 668
Query: 341 ---CNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRN----LVCTDL 393
C ++ V + K+ + G S +H + Q R ++ +F CR L+ TDL
Sbjct: 669 LQTCKQARYVHTVIKR-ERPGMSVLVLHGGIPQLRRLDIYREF----CRKQHVILITTDL 833
Query: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
RG+D AVN VI D P TY+HR GR+ RF G A+ ++ + ++ +
Sbjct: 834 ACRGLDFPAVNWVIQLDCPVDVNTYIHRAGRTARFECNGQALLVLLPSEEEHMVEALHRK 1013
Query: 454 GTEIKPIPSNIDK 466
IK I N K
Sbjct: 1014KIPIKKISVNTKK 1052
Score = 36.6 bits (83), Expect(2) = 4e-32, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +2
Query: 129 IALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQ 166
+A G D+L AK G+GK+ A+LIP+LE L K+D I
Sbjct: 20 LACRGLDVLGAAKTGSGKTLAFLIPILETLS-KQDIIS 130
>09327
Length = 1087
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 6/237 (2%)
Frame = +2
Query: 168 MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRIL 227
++VPTRELA QV ++ ++ H + + GG + LD + IATPGR++
Sbjct: 17 WLLVPTRELAQQVQEVAVEFG-HSSRVRSVCVYGGAQRGPQLRELDRGAEICIATPGRLI 193
Query: 228 DLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKF 287
D ++ + +VLDEAD++L F + I+ + +RQ L++SAT+P V+K
Sbjct: 194 DFLESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRKL 373
Query: 288 MNSHLQKPYEINLME-ELT-----LKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFC 341
+ + +IN+ +LT L+ + + E + V LN + + N+++IF
Sbjct: 374 AEDFIMEYTQINIGALQLTANHNILQIIDVCMDHEKEEKLVKLLNEIMQEKE-NRTLIFV 550
Query: 342 NSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGI 398
+ ++ + + +++ + G+ IH Q+ R+ V +DFRNG C L+ TD+ +RG+
Sbjct: 551 ETKRKCDDIHRRMKRDGWPVLCIHGDKSQQERDWVLNDFRNGRCPVLLATDVASRGL 721
>04883
Length = 1155
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 132/261 (50%), Gaps = 11/261 (4%)
Frame = +3
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
F DY + + + W P+PIQ +S P+A++G+D++ A+ G+GK+ A+++P +
Sbjct: 381 FPDYVMNQ-----VRRNSWTAPTPIQSQSWPVAMAGKDLVGIAQTGSGKTLAFMLPAIVH 545
Query: 158 LDL-----KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRL 212
++ + D + +VPTRELA QV ++ Q H + + GG + L
Sbjct: 546 INHQAYLERGDGPIVLALVPTRELAQQVQEVA-QEFGHASRVRSVCVYGGAPRGPQLRDL 722
Query: 213 DDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQ 272
+ + IATPGR++D ++ + +VLDEAD++L F + II + +RQ
Sbjct: 723 ERGAEICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 902
Query: 273 ILLYSATFPLSVQKFMNSHLQKPYEINLME-ELTLK-GVTQYYAYVTERQK----VHCLN 326
L++SAT+P V+K + + ++N+ ELT + Q E +K V LN
Sbjct: 903 TLMWSATWPKEVRKLAEDFIDEYVQVNIGALELTANHNILQIIDVCMEHEKEDKLVKLLN 1082
Query: 327 TLFSRLQINQSIIFCNSSQRV 347
+ +R + + FC +++
Sbjct: 1083EIMTRKKRTKP-SFCGDQEKM 1142
>01517
Length = 2605
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 8/251 (3%)
Frame = +2
Query: 227 LDLIKKGVAKVDHVQMIVLDEADKLLSQDFV----QIMEDIILTLPKNRQILLYSATFPL 282
+D++++G +DH +VLDEAD++L F +I+E + RQ L++SATFP
Sbjct: 2 VDMMERGKIGMDHCNYLVLDEADRMLDMGFEPQIRRIVEKDTMPPTGQRQTLMFSATFPK 181
Query: 283 SVQKFMNSHLQKPYEINLME-ELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQ---SI 338
+Q L + + T + +TQ +V E +K L L ++
Sbjct: 182 EIQLLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEPEKRSFLLDLLMASGTGPESLTL 361
Query: 339 IFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGI 398
+F + + + L + + Y IH Q R F+NG LV T + RG+
Sbjct: 362 VFVETKKGADSLEQFLMYENYPATSIHGDRSQREREDALRVFKNGDRPILVATAVAARGL 541
Query: 399 DIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIK 458
DI V VINFD P E Y+HRIGR+GR G+LGLA + +R + + + L +
Sbjct: 542 DIPNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNIARDMLDLLTEANQ 721
Query: 459 PIPSNIDKSLY 469
+PS ++ Y
Sbjct: 722 EVPSWLESLAY 754
>22006
Length = 3414
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +2
Query: 119 PSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL-KKDNIQAMVIVPTRELA 177
P+PIQ ++IP+ + G+D++A A+ G+GK+ A+L+P+LERL + +A+++ PTRELA
Sbjct: 3005 PTPIQRKTIPVIMEGKDMVAMARTGSGKTAAFLVPMLERLKMHSSKGARALILSPTRELA 3184
Query: 178 LQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKV 237
LQ + ++ K + + GG + D L ++IATPGR+L ++ + +
Sbjct: 3185 LQTLKFTKELGKFL-DLRAAVILGGDRMEDQFSALHQNPDIIIATPGRLLHVLVEMKKSL 3361
Query: 238 DHVQMIVLDEADKLL 252
V +V DEAD+L
Sbjct: 3362 KEVIYVVFDEADRLF 3406
>02054
Length = 1110
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Frame = -3
Query: 281 PLSVQKFMNSHLQKPYEINLMEEL-TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSII 339
P+ K + L+ P ++ + + T+ + Q Y ++ + K L ++ + L N ++
Sbjct: 802 PIRWPKLQRASLRDPVKVEVSNKYQTVDTLQQSYLFIPAKYKDAYLVSILNELAGNSFMV 623
Query: 340 FCNS---SQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTR 396
FC++ +QRV LL + LG++ +H +M Q R + F++ L+ TD+ +R
Sbjct: 622 FCSTCANTQRVALL---LRNLGFTAIPLHGQMSQAKRLGSLNKFKSKDRSILIATDVASR 452
Query: 397 GIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTE 456
G+DI V+VV+N D P ++ Y+HR+GR+ R G G AI ++ D + IE +G +
Sbjct: 451 GLDIPHVDVVLNLDIPTHSKDYMHRVGRTARAGRSGRAITFVSQYDVELYQRIEHLIGKK 272
Query: 457 IKPIPSNIDKSLYVAEYHSE 476
+ P+ D+ + +AE +E
Sbjct: 271 LSEYPTEKDQVMQLAERVAE 212
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = -2
Query: 202 GTNLRDDIMRLDDTVHVVIATPGRILDLIK--KGVAKVDHVQMIVLDEADKLLSQDFVQI 259
G ++ + L H++IATPGR++D ++ KG + + ++ +V+DEAD++L +F
Sbjct: 1043 GIDMSTQALMLGKKPHIIIATPGRLVDHLENTKGFS-LRALKFLVMDEADRILDMNFQDE 867
Query: 260 MEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKP 295
++ I+ +P+ R L+SAT V K S + P
Sbjct: 866 VDKILKVIPRERNTYLFSATMTNKVAKTTASITEGP 759
>08036
Length = 1226
Score = 60.5 bits (145), Expect(2) = 2e-19, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Frame = +3
Query: 395 TRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLG 454
RGID Q V+ VINF+FPK + Y+HR+GR+ R G A++LI+ + +++EE
Sbjct: 612 ARGIDFQNVSNVINFEFPKTVDAYIHRVGRTARGDKQGCALSLISRHENDQFEAVEEAQK 791
Query: 455 TEIKPIPS 462
T+ K PS
Sbjct: 792 TD-KDSPS 812
Score = 53.5 bits (127), Expect(2) = 2e-19, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 3/177 (1%)
Frame = +1
Query: 219 VIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSA 278
V+ TP RIL ++ G ++ VQM+V+DEAD + S M+ ++ LP+ Q L SA
Sbjct: 1 VVGTPSRILAHLRAGHLELHTVQMLVVDEADLVFSFGHEADMKKLMEELPRIYQAFLMSA 180
Query: 279 TFPLSVQKFMNSHLQKPYEINLMEELTLKG--VTQYYAYVTERQKVHCLNTLFSR-LQIN 335
T V+ L P + L E + +TQY+ K + + L
Sbjct: 181 TLSEDVKALKKMVLHNPVILKLKESQLPESTQLTQYHVKCEVDDKFTLMVAVLKLGLVRG 360
Query: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTD 392
+SI+F NS L + G +++++ + R + F GL ++ +D
Sbjct: 361 KSILFVNSVDSCYKLKLFLEPFGIPACVLNSELPVKSRCHIVSQFNEGLYDIIIASD 531
>14337
Length = 693
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 70/133 (52%)
Frame = +2
Query: 317 TERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRV 376
+E K+ + LF+ ++F S QR + L + + IHA Q R+
Sbjct: 5 SEAGKLMAMRNLFTEGITPPVLVFVQSKQRAKELYSEFMFDKHKVDAIHADKPQAERDAT 184
Query: 377 FHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAIN 436
F G LVCT+L RGID + +N+VIN+DFP A +Y+HRIGR+GR G G AI
Sbjct: 185 VRAFTEGRVWVLVCTELMGRGIDFKGINLVINYDFPTNAVSYIHRIGRTGRAGVPGRAIT 364
Query: 437 LITYDDRFNLKSI 449
T D +L+SI
Sbjct: 365 FFTEQDVTHLRSI 403
>19640
Length = 456
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = -1
Query: 339 IFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGI 398
IFCN+ ++V+ L +++S ++ +H M Q R + FR+G R L+ TDL RGI
Sbjct: 456 IFCNTRRKVDQLTQEMSSHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 277
Query: 399 DIQAVNVVINFDFPKLAETYLHRIGRSG 426
D+Q V++VIN+D P E Y+HRIGR G
Sbjct: 276 DVQQVSLVINYDLPSNRENYIHRIGRGG 193
Score = 42.7 bits (99), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -3
Query: 419 LHRIGRSG-RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 464
LH RS RFG G+AIN IT DDR LK IE+ T I+ +P+NI
Sbjct: 220 LHS*NRSRWRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANI 80
>31899
Length = 453
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 75/125 (60%)
Frame = -1
Query: 84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNG 143
+ +T+DV +++ +F L + +L G+ G+E+PSPIQ ++IP+ G D++ +AK+G
Sbjct: 381 KARTNDVMTSESVDFASLLLSKPVLNGLKNAGFERPSPIQLKAIPLGRCGLDLIVQAKSG 202
Query: 144 TGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGT 203
TGK+ + + LE ++ + Q +V+ PTRE+ALQ+ ++ + M G + GG
Sbjct: 201 TGKTCVFSVVALEGIETTARSTQVLVLAPTREIALQIWEVINSIGSAMSGLQCHTFIGGL 22
Query: 204 NLRDD 208
+ +D
Sbjct: 21 PVHED 7
>34295
Length = 694
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Frame = -1
Query: 333 QINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTD 392
+I +IF N+ + +LL+ ++ + +H MRQ+ R F++ R L+ TD
Sbjct: 547 KIPNVMIFTNTKKYCQLLSMTLTNMEIENVCLHGFMRQKERVSALSRFKSNHIRTLIATD 368
Query: 393 LFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEE 451
+ RG+DI +V +VIN P+ + Y+HR+GR+ R G G+AI++ + D L +IEE
Sbjct: 367 VAARGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGVAISIFRFPRDLELLGAIEE 188
Query: 452 QLGTEIKPIP 461
++ T++ P
Sbjct: 187 EINTKLTEHP 158
>12995
Length = 1072
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%)
Frame = +3
Query: 337 SIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTR 396
+++F + VE L +++ G +C YI++ + Q R F + + ++ TDL R
Sbjct: 138 TVVFVATKHHVEYLNTLLTKCGIACTYIYSSLDQTARKIHVAKFTHKQVKVMLVTDLAAR 317
Query: 397 GIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTE 456
GIDI ++ V+NF FP A+ ++HR+GR R G G A +L+ D+ +L + LG
Sbjct: 318 GIDIPQLDNVVNFHFPAKAKLFVHRVGRVARAGRSGTAYSLVAMDEVAHLVDLHVFLGRP 497
Query: 457 IKPIPSN 463
+K P +
Sbjct: 498 LKTAPQS 518
>19525
Length = 585
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 104/185 (56%), Gaps = 5/185 (2%)
Frame = +2
Query: 161 KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVI 220
++ + +V+VPTRELA+QV Q+ Q+S++ + +A GG +++ L +V+
Sbjct: 2 ERATTRVLVLVPTRELAVQVYQVGQQISQYTKISICLAA-GGLDIKGQEAALRLCPDIVV 178
Query: 221 ATPGRILDLIKKGVA-KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSAT 279
ATPGR++D + + HV+++VLDEAD++L + F M +II RQ +L+SAT
Sbjct: 179 ATPGRLIDHLHNAPNFTIAHVEILVLDEADRMLDEYFAAQMTEIIRMCNFQRQTMLFSAT 358
Query: 280 FPLSVQKFMNSHLQKPYEINLMEELTLK-GVTQYYAYVTERQ---KVHCLNTLFSRLQIN 335
+VQ + L++ ++ + + + G+ Q + + E + + +++L SR +
Sbjct: 359 MSDAVQDLASVSLKEAVKVFVNQNTDIALGLQQEFVRIRENKEGDREAIVSSLVSRTFCD 538
Query: 336 QSIIF 340
+ ++F
Sbjct: 539 KCMVF 553
>11624
Length = 2257
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Frame = -1
Query: 305 TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNS---SQRVELLAKKISQLGYSC 361
T +G+T+Y +K + L+ + F NS + R+ LL K L
Sbjct: 991 TPEGLTEYIVESDSSEKPLLVLHFLHNLKFRSVLCFTNSVETTHRLCLLVKLYGGLSVKE 812
Query: 362 FYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHR 421
F +++ E R ++ F G LVC+D RG+D+ V VI++D P +TY+HR
Sbjct: 811 F--SSRLPGERRKKILKQFSKGKIDLLVCSDAMARGMDVDNVKYVISYDNPPYIKTYIHR 638
Query: 422 IGRSGRFGHLGLAINLITYDDRFNLKSIEEQLG 454
+GR+ R G G AI+L+ + F+ K + + G
Sbjct: 637 VGRTARAGRAGTAISLLEKKEFFHFKQMMREAG 539
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 28/257 (10%)
Frame = -3
Query: 43 NQLKNTSTINNGTPQQAQSMAATIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYC 102
N + S + N T A+ + + DW T + L+ D + E
Sbjct: 2120 NAIGGFSXLGNFTHDNARPVKRKLP---DWLATPTIIGGALKKHRHDTDLKEEGEDNMSV 1950
Query: 103 LKRELLMGIFEMGWEKPSPIQEESIP--------------IALSGRDILARAKNGTGKSG 148
L +L + + G ++ P+Q E IP L RDI A G+GK+
Sbjct: 1949 LDDQLRGKLHDSGIDRLFPVQREFIPELWKDVRYSLTAGRYGLRPRDICVSAPTGSGKTL 1770
Query: 149 AYLIPLLERLDLKK-DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGT--NL 205
AY +P+++ L + +++A++++P R+LA QV Q+ KV G T N+
Sbjct: 1769 AYTLPIIQCLKQRMVPHVRAVIVLPVRDLAEQVYQVFCHYCADT-PLKVGIVVGKTVFNV 1593
Query: 206 RDDIM---RLDDTVHVVI----ATPGRILDLIKKGVA-KVDHVQMIVLDEADKLLSQ--- 254
D + R H VI ATPGR++D I + H++ +V+DEAD+++
Sbjct: 1592 EQDTLVKKRYGGVYHSVIDILVATPGRLVDHINSTPGFDLSHLRFLVIDEADRMMEDIKL 1413
Query: 255 DFVQIMEDIILTLPKNR 271
D++ ++E T P +R
Sbjct: 1412 DWLSVVETAAFT-PTHR 1365
>00617
Length = 1505
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%)
Frame = -3
Query: 354 ISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPK 413
+ +L +SC +H+ + Q R F++ R L+ TD+ +RG+DI V+++IN + P
Sbjct: 1497 LEKLQFSCAVLHSMIPQRFRLSSLSRFKSNQTRILISTDVASRGLDIPTVDLIINHNIPN 1318
Query: 414 LAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIP 461
Y+HR+GR+ R G G +I+L+T D +KSIE + ++ P
Sbjct: 1317 RPRDYVHRVGRTARAGRCGQSISLVTEFDIKLIKSIESHINCQMTEHP 1174
>19151
Length = 625
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Frame = -3
Query: 388 LVCTDLFTRGIDIQAVNVVINFDFP------KLAETYLHRIGRSGRFGHLGLAINLITYD 441
L+ T++ +RGIDI+ V +V+NFD P ETYLHRIGR+GRFG G+AINLI +
Sbjct: 617 LITTNVLSRGIDIEQVTIVVNFDLPIDLRGNADCETYLHRIGRTGRFGKSGIAINLIDGE 438
Query: 442 DRFNL-KSIEEQLGTEI 457
N+ ++IE+ +I
Sbjct: 437 KSMNVCRAIEKHFQKDI 387
>17708
Length = 882
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Frame = +1
Query: 134 RDILARAKNGTGKSGAYLIPLLERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSK 189
RD++ AK G+GK+ A+LIP +E + + ++ ++I PTREL++Q + ++ K
Sbjct: 553 RDLMGAAKTGSGKTLAFLIPAIELMYKLKFMPRNGTGCIIISPTRELSMQTFNVLTELLK 732
Query: 190 --HMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILD 228
H +M GG N D++ +L V++++ATPGR+LD
Sbjct: 733 YHHHTFGLIM---GGVNRHDEVKKLKKGVNIIVATPGRLLD 846
>11160
Length = 646
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 17/191 (8%)
Frame = -1
Query: 201 GGTNLRDDIMR-LDDTVHVVIATPGRILDLIKKG------VAKVDHVQMIVLDEADKLLS 253
GG + DI + + ++IATPGR+ DL + A V ++++VLDEAD+LL
Sbjct: 646 GGVSCSHDISKFMKSGGSILIATPGRLDDLFSRKESGFNLAASVKALEVLVLDEADRLLD 467
Query: 254 QDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLME--------ELT 305
F + I+ LPK R+ L+SAT V+ + + L+ P + + E + T
Sbjct: 466 MGFEASINTILGHLPKLRRTGLFSATQTDEVENLIRAGLRNPLRVTVKEKKLAGEADQRT 287
Query: 306 LKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQL--GYSCFY 363
++ YY V +K L ++ ++F ++ V+ + ++QL
Sbjct: 286 PSTLSNYYMIVEAEEKFSQLVKFLKTHHRDKLLLFFSTCACVDYFSMCLTQLLKHMQVLS 107
Query: 364 IHAKMRQEHRN 374
IH+KM+Q+ RN
Sbjct: 106 IHSKMKQK-RN 77
>30136
Length = 524
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Frame = +2
Query: 97 EFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE 156
+F + L ++ I G++ P+PIQ + PIA+SG + + AK G+GK+ Y++P +
Sbjct: 134 DFAEAYLPDYVIKEIRRQGYKSPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYILPAIV 313
Query: 157 RLD-----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATT---GGTNLRDD 208
++ + + A+V+ PTRELA Q+ QV+ G + + T GG
Sbjct: 314 HINNQQPLQRGEGPIALVLAPTRELAQQIQ----QVATEFGSSSYVRNTCVFGGAPKGGQ 481
Query: 209 IMRLDDTVHVVIAT 222
+ L +VIAT
Sbjct: 482 MRDLQRGCEIVIAT 523
>17544
Length = 1047
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 19/150 (12%)
Frame = +2
Query: 87 TSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGK 146
T D N FE+ L + I + KP+P+Q+ ++PI L RD++A A+ G+GK
Sbjct: 605 TGDSPPPHINSFEECTLGEIIRNNIVLSKYNKPTPVQKFALPIVLGKRDLMACAQTGSGK 784
Query: 147 SGAYLIPLLERL--------DLKKDNIQ---------AMVIVPTRELALQVSQICIQVSK 189
+ A+L+P+L ++ L+++ + A+++ PTRELA SQI + K
Sbjct: 785 TAAFLLPILNQVYENGPTPEALQQNQSRGYRRKMYPIALILAPTRELA---SQIYDEARK 955
Query: 190 HMGGAKVMATT--GGTNLRDDIMRLDDTVH 217
+++ GG ++ + LD H
Sbjct: 956 FAYRSRLRPCVVYGGADIGAQMRDLDKGCH 1045
>33025
Length = 558
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Frame = +3
Query: 201 GGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDF---V 257
G T+ R R+ ++V+ TPGR+LD I + Q ++LDEAD++L F +
Sbjct: 63 GATDRRYQKSRIMKGANLVVGTPGRLLDFIGDQTISLGKCQYLILDEADRMLDMGFEPEI 242
Query: 258 QIMEDIILTLPKN-RQILLYSATFPLSVQKFMNSHLQKPYEINL-MEELTLKGVTQYYAY 315
+ + D PK RQ L++SATF +Q+ L I + + VTQ +
Sbjct: 243 RKLVDTHGMPPKTQRQTLMFSATFKEDIQRLAGDFLNDYLFITVGIVGGACSDVTQTFLE 422
Query: 316 VTERQKVHCLNTLFSRLQINQSIIFCNS 343
V QK L + + + +S+ C S
Sbjct: 423 VDRLQKRDHLCEILNEMGTAKSVGVCWS 506
>10649
Length = 472
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 358 GYSCFYIHAKMRQEHRNRVFHDFRNGLCRN----LVCTDLFTRGIDIQAVNVVINFDFPK 413
G S +H + Q R ++ +F CR L+ TDL RG+D AVN VI D P
Sbjct: 64 GMSVLVLHGGIPQLRRLDIYREF----CRKQHVILITTDLACRGLDFPAVNWVIQLDCPV 231
Query: 414 LAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDK 466
TY+HR GR+ RF G A+ ++ + ++ + IK I N K
Sbjct: 232 DVNTYIHRAGRTARFECNGQALLVLLPSEEEHMVEALHRKKIPIKKISVNTKK 390
>39583
Length = 234
Score = 54.7 bits (130), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = -3
Query: 366 AKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRS 425
A R R F+ G L+ TDL +RG+DI+ V VINF P + Y+HR+GR+
Sbjct: 193 ATCR*AQRLEALKRFKEGEIDVLLATDLASRGLDIEGVKTVINFTMPSTLKHYVHRVGRT 14
Query: 426 GRFG 429
R G
Sbjct: 13 ARAG 2
>31220
Length = 818
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 10/77 (12%)
Frame = +2
Query: 395 TRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLG 454
+RGID Q VN VINFDFP +Y+HR GR+ R + G ++ ++ + +++EE+L
Sbjct: 164 SRGIDFQGVNNVINFDFPLDVTSYIHRAGRTARGNNTGSVLSFVSVKELPINQAVEEKLR 343
Query: 455 T----------EIKPIP 461
+ + KP+P
Sbjct: 344 SCFGREPLLKRDTKPLP 394
>33543
Length = 471
Score = 47.8 bits (112), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 417 TYLHRIGRSGRFGHLGLAINLITYDDRFN-LKSIEEQLGTEIKPIPSNIDKSLYVAEYHS 475
TYLHR+GR+GRFG GLAI ++ + + L S++E+ + +P I S Y S
Sbjct: 3 TYLHRVGRAGRFGTRGLAITFVSNETEADVLNSVQERFEVSVTDLPEQISVSTYTEGQ*S 182
Query: 476 E-PAEDEK 482
P E E+
Sbjct: 183 RMPVEGEE 206
>19172
Length = 484
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = -1
Query: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
++IIF + +RV+ + + IS+ G+ IH Q+ R+ V FRNG LV TD+
Sbjct: 331 KTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAA 152
Query: 396 RGI 398
RG+
Sbjct: 151 RGL 143
>12121
Length = 465
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = -2
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTG 145
FE+ L ++ I W P+PIQ +S PIA+SG+D++ A+ G+G
Sbjct: 146 FEEANLPDYVMSQIHRNNWTSPTPIQSQSWPIAMSGKDLVGIAQTGSG 3
Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDF 256
+ IATPGR++D ++ + +VLDEAD++L F
Sbjct: 463 ICIATPGRLIDFLESNRTNLRRCTYLVLDEADRMLDMGF 347
>03381
Length = 1206
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 398 IDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDR-FNLKSIEEQLGTE 456
+DI + V+N+D + +T+ HR+GR+GR G G A LIT D+ F + G
Sbjct: 3 LDIPHIRTVVNYDVARDIDTHTHRVGRTGRAGEKGSAYTLITDKDKEFAPLLVRNLEGAN 182
Query: 457 IKPIPSNID 465
P P+ +D
Sbjct: 183 QTPPPALLD 209
>11423
Length = 1434
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = -2
Query: 404 NVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLG 454
VI++D P +TY+HR+GR+ R G G AI+L+ + F+ K + + G
Sbjct: 1397 KYVISYDNPPYIKTYIHRVGRTARAGRAGTAISLLEKKEFFHFKQMMREAG 1245
>06438
Length = 989
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +1
Query: 393 LFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAI 435
L RG+D AVN VI D P TY+HR GR+ RF G A+
Sbjct: 37 LACRGLDFPAVNWVIQLDCPVDVNTYIHRAGRTARFECNGQAL 165
>34134
Length = 271
Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Frame = +3
Query: 127 IPIALSGRDILARAKNGTGKSGAYLIPLLERLDL-----KKDNIQAMVIVPT 173
+PIA+SGRD + A+ G+GK+ ++++P + ++ + D A+V+VPT
Sbjct: 84 VPIAMSGRDCVGIAQTGSGKTLSFILPAIVHINHQPTLERGDGPIALVLVPT 239
>33083
Length = 1931
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGR 427
RG+DI V+ ++ +D P ++ Y+HR+GR+ R
Sbjct: 1 RGLDIPQVDWIVQYDPPDESKEYIHRVGRTAR 96
>28851
Length = 328
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG 133
F D + R L+ G+ M +EKP+PIQ + P +LSG
Sbjct: 223 FSDLDIARPLMKGLSTMQFEKPTPIQAPASP-SLSG 327
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6753548|ref|NP_034110.1| C-terminal binding protein 2
[Mus musculus]
(445 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05955 244 e-111
02672 71 1e-12
25533 69 3e-12
12358 48 1e-05
20523 33 0.30
>05955
Length = 1009
Score = 244 bits (623), Expect(2) = e-111, Method: Compositional matrix adjust.
Identities = 115/157 (73%), Positives = 136/157 (86%)
Frame = -1
Query: 6 KHKVKRQRLDRICEGIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQST 65
+ +VKR R++ IR I NGP+HPRPLVALLDGRDC+VEMPILKD+ATVAFCDAQST
Sbjct: 847 QSQVKRNRIEAPM-SIRGPIPNGPMHPRPLVALLDGRDCSVEMPILKDVATVAFCDAQST 671
Query: 66 QEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCN 125
QEIHEKVLNEAVGA+M+HTITLT+EDL+KFK+LRVI+RIGSG+DNVD+KAAGE+GIAVCN
Sbjct: 670 QEIHEKVLNEAVGALMWHTITLTKEDLDKFKSLRVIIRIGSGFDNVDVKAAGEMGIAVCN 491
Query: 126 IPSAAVEETADSTVCHILNLYRRNTWLYQALREGTRV 162
+P VEE ADST+C ILNLYRR WL +REG ++
Sbjct: 490 VPGYGVEEVADSTLCLILNLYRRTYWLANMVREGKKL 380
Score = 174 bits (441), Expect(2) = e-111, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%)
Frame = -3
Query: 161 RVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERS 220
++ EQ+RE A G+ARIRG+TLG++G GR G AVAVRAK FGF+VIFYDPYL DGIE+S
Sbjct: 386 KINGPEQLREAAQGSARIRGDTLGIVGLGRVGTAVAVRAKVFGFNVIFYDPYLADGIEKS 207
Query: 221 LGVQRVYTLQDLLYQSDCVSXXXXXXXXXXXXXXDFTIKQMRQGAFLVNAARGGLVDEKA 280
LG+ RVYTLQ+LL+QSDCVS D+TIKQMR GAFL+N ARGGLVDE A
Sbjct: 206 LGITRVYTLQELLFQSDCVSLHCTLNEHNHHLINDYTIKQMRPGAFLINTARGGLVDEHA 27
Query: 281 LAQALKEG 288
LA ALK+G
Sbjct: 26 LAVALKDG 3
>02672
Length = 2522
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = -2
Query: 299 ESEPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMXXXXXXXXXXXXXXXXPESLRNCVN 358
ESEPFS A P+KD PNL+ TPH+++YSEQ+ E+ P+SLRNCVN
Sbjct: 2521 ESEPFSLASSPVKDCPNLMITPHSSFYSEQSVSELREMAAGEVRRAILGRIPDSLRNCVN 2342
Query: 359 KEFF 362
KE+F
Sbjct: 2341 KEYF 2330
>25533
Length = 437
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%)
Frame = +2
Query: 178 IRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSD 237
+ G+TL +IG GR G+ VA+R ++FG + I YDP + + + + L+ + ++D
Sbjct: 74 LNGKTLAIIGLGRIGREVALRMQSFGMTTIGYDPIIGADVAAEFDTEWL-PLEQIWQRAD 250
Query: 238 CVSXXXXXXXXXXXXXXDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDV 297
++ D + ++G +VN ARGG+++E AL +AL+ G+ GA LDV
Sbjct: 251 FITVHTPLIPATTNLINDAVFAKCKKGIRVVNCARGGIIEEAALLRALESGQCGGAGLDV 430
Query: 298 H 298
Sbjct: 431 F 433
>12358
Length = 598
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 272 RGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPH---TAWYSEQ 328
RGG+++ LA ALK G I GA LDV E EP PL PN + TPH W S
Sbjct: 549 RGGVINHDHLAVALKTGVIGGAGLDVTEPEPLPPTH-PLVHLPNCVVTPHMGSNTWDSRN 373
Query: 329 A 329
+
Sbjct: 372 S 370
>20523
Length = 422
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 284 ALKEGRIRGAALDVHESE-PFSFAQGPLKDAPNLICTPHTAWYSEQASLEM 333
ALK G+ GAA DV+ E P S L + P ++ TPH + +A + +
Sbjct: 419 ALKSGKCAGAAFDVYAEEPPKSEVTKALINHPKVVATPHLGASTSEAQVRV 267
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6755196|ref|NP_036096.1| proteasome (prosome,
macropain) subunit, alpha type 4 [Mus musculus]
(261 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00789 397 e-111
02448 155 2e-38
24591 152 1e-37
14551 135 2e-32
20771 118 2e-27
04255 81 7e-22
17033 99 2e-21
19133 65 3e-11
28971 65 4e-11
11023 39 0.003
37174 34 0.070
05451 33 0.16
06516 32 0.30
00040 28 4.3
>00789
Length = 1584
Score = 397 bits (1019), Expect = e-111, Method: Compositional matrix adjust.
Identities = 184/237 (77%), Positives = 209/237 (88%)
Frame = +1
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
M+RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILA DG++LAAERRN +KLLDEV
Sbjct: 22 MARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILAKDGIVLAAERRNTNKLLDEVS 201
Query: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 120
+SEKIY+L++DMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQ+V LCDIKQA
Sbjct: 202 YSEKIYRLSDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQVVATLCDIKQA 381
Query: 121 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK 180
YTQFGGKRPFGVS+LY+GWDKHYGFQLYQSDPSGNYGGWKATCIGNNSA AVS+LKQ+YK
Sbjct: 382 YTQFGGKRPFGVSILYMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSANAVSLLKQEYK 561
Query: 181 EGEMTXXXXXXXXXXXXNKTMDVSKLSAEKVEIATLTRESGKTVIRVLKQKEVEQLI 237
E E + KT+D++KL+ +KVE+ATLTR+ GKTV+ +L +V+ LI
Sbjct: 562 EDESSLDEALALSIKVLGKTLDLTKLTPDKVEMATLTRKDGKTVMTILPDNQVDTLI 732
>02448
Length = 1302
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 131/237 (55%)
Frame = +2
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
MS RYD T+FSP+G L+QVEYA EA+ T +G+ N+ V+L E++ + KL +E
Sbjct: 251 MSDRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGNNLVVLGVEKKAVAKLQEERT 430
Query: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 120
KI L+E +A + AG+T+DA +L N R+ Q + L ++P+ E + + +KQ
Sbjct: 431 V-RKIALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQK 607
Query: 121 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK 180
YTQ G+RPFG+S L IG+D LYQ+DPSG Y WKA IG N+ L++ Y
Sbjct: 608 YTQSNGRRPFGLSSLIIGFDYDGSPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHYT 787
Query: 181 EGEMTXXXXXXXXXXXXNKTMDVSKLSAEKVEIATLTRESGKTVIRVLKQKEVEQLI 237
+ ++V + A+ +E+A + R +++L+ E+E+ I
Sbjct: 788 --DEVAASDKETIKLALKALLEVVQSGAKNMEVAVMRRGQA---LQMLESDEIEKYI 943
>24591
Length = 1801
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 131/237 (55%)
Frame = +1
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
MS RYD T+FSP+G L+QVEYA EA+ T +G+ ++ V+L E++ + KL +E
Sbjct: 28 MSDRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGDNLVVLGVEKKAVAKLQEERT 207
Query: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 120
KI L+E +A + AG+T+DA +L N R+ Q + L ++P+ E + + +KQ
Sbjct: 208 V-RKIALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQK 384
Query: 121 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK 180
YTQ G+RPFG+S L IG+D LYQ+DPSG Y WKA IG N+ L++ Y
Sbjct: 385 YTQSNGRRPFGLSSLIIGFDYDGTPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHYT 564
Query: 181 EGEMTXXXXXXXXXXXXNKTMDVSKLSAEKVEIATLTRESGKTVIRVLKQKEVEQLI 237
+ ++V + A+ +E+A + R +++L+ E+E+ I
Sbjct: 565 --DEVAASDKETIKLALKALLEVVQSGAKNMEVAVMRRGQA---LQMLESDEIEKYI 720
>14551
Length = 1344
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 102/182 (56%), Gaps = 1/182 (0%)
Frame = +3
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
M+ RY T FSP G+L Q+EYA+ A+G +GI A +GV+LA E++ DE
Sbjct: 141 MTERYSFSLTTFSPSGKLVQIEYALAAVGAGAPSVGIKATNGVVLATEKKQKSVXYDEHS 320
Query: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 120
+ K+ + +++ +G+ D VL R +A++Y Y E IP QLV + + Q
Sbjct: 321 IN-KVETITKNIGIVYSGMGPDYRVLCRRARKLAEQYKRVYNEQIPTAQLVQRVAAVMQE 497
Query: 121 YTQFGGKRPFGVSLLYIGWDKHYGFQ-LYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDY 179
+TQ GG RPFGVSLL GWD+ LYQ DPSG Y WKAT +G N + L++ Y
Sbjct: 498 FTQSGGVRPFGVSLLMAGWDEDDKKPFLYQCDPSGAYFAWKATAMGKNHINGKTFLEKRY 677
Query: 180 KE 181
E
Sbjct: 678 SE 683
>20771
Length = 674
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 103/182 (56%), Gaps = 5/182 (2%)
Frame = +2
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEK 64
YD FSPEGRL+QVEYA+EAI T +GI N+GV+LA E+R L++ EK
Sbjct: 101 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTNEGVVLAVEKRVTSSLIEPTSI-EK 277
Query: 65 IYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAY--- 121
I ++++ + C+++G+ +D+ L + R+ AQ + Y E + E + A+ ++ A+
Sbjct: 278 IMEVDKHIGCAMSGLIADSRTLIDRARVEAQNHWFTYNENMSVESVTQAVSNLALAFGDD 457
Query: 122 --TQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDY 179
RPFGV+LL G D + G +L+ DPSG + + A IG+ S A L++ Y
Sbjct: 458 DPDPGAMSRPFGVALLIAGVDSN-GPRLFHMDPSGTFIQYDAKAIGSGSEGAQQALQEQY 634
Query: 180 KE 181
+
Sbjct: 635 HK 640
>04255
Length = 1758
Score = 80.9 bits (198), Expect(2) = 7e-22, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%)
Frame = -2
Query: 54 KLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTA 113
KLLD + +Y L E + C + G+ +D+ R A ++ Y IP + L
Sbjct: 1457 KLLDPTTVTH-LYSLTERIGCVMTGMIADSQSQVQRARYEAAKWKYTYGYDIPVDMLCKR 1281
Query: 114 LCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVS 173
+ +I Q YTQ RP G ++ IG+D G ++Y++DP+G Y G+KAT G+ A
Sbjct: 1280 IANINQVYTQSAEMRPLGCCMILIGYDDEKGPEVYKTDPAGYYCGFKATSAGSKQLEANG 1101
Query: 174 MLKQDYKEGEMTXXXXXXXXXXXXNKTMDVSKLSAEKVEIATLTRESGKTVIRVLKQKEV 233
L++ K+ + T+ + A +VE+ +T+++ R+L + ++
Sbjct: 1100 FLEKKIKKKQDFTYNEAAEIAITCLSTVLSADFKASEVEVGIVTKDNPN--FRILTEADI 927
Query: 234 E 234
+
Sbjct: 926 D 924
Score = 40.0 bits (92), Expect(2) = 7e-22, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 12 FSPEGRLYQVEYAMEAIGHAG-TCLGILANDGVLLAAERR 50
SPEGRLYQVEYA +AI G T + + D ++ +++
Sbjct: 1585 LSPEGRLYQVEYAFKAINQGGLTSVAVRGKDSAVIVTQKK 1466
>17033
Length = 2217
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%)
Frame = -3
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEK 64
YD + FSP+GR++QVEYA +A+ ++GT +GI DGV++ E+ KL ++ +++
Sbjct: 2149 YDLSASHFSPDGRVFQVEYAQKAVENSGTAIGIRGKDGVVMGVEKLVTSKLYEQ-GANKR 1973
Query: 65 IYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQF 124
++ ++ + +VAG+ +DA L + + Y Y P+P + L + AYT
Sbjct: 1972 LFNIDRHIGGAVAGLLADARQLMERAKEESSNYRFNYGSPVPLKYLTDRVAGYVHAYTLH 1793
Query: 125 GGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAA 171
RPFG S++ +D G Q++ +PSG G+ IG A
Sbjct: 1792 SAVRPFGTSMIVASYDA-VGPQMFLVEPSGVSWGYYGCAIGKAKQTA 1655
>19133
Length = 692
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%)
Frame = +1
Query: 79 ITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIG 138
+T+DA +L N ++ YQ+P+P +LV+A+ + Q T G+RPFGV LL G
Sbjct: 1 LTADARLLCNFMQTECLDSRWAYQQPLPVSRLVSAIGNKLQIPTHRYGRRPFGVGLLIAG 180
Query: 139 WDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQ 177
+D G +YQ+ PS NY KA IG S +A + L++
Sbjct: 181 YDWS-GPHIYQTCPSANYYDCKAMAIGARSQSARTYLER 294
>28971
Length = 437
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +1
Query: 119 QAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSML 175
Q YTQ GG RPFGVSLL GWD + LYQSDPSG Y WKAT +G N+ + L
Sbjct: 4 QEYTQSGGVRPFGVSLLICGWDNERPY-LYQSDPSGAYFAWKATAMGKNAVNGKNFL 171
>11023
Length = 1057
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = -2
Query: 134 LLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQ 177
++ IG+D G ++Y++DP+G Y G+KAT G+ A L++
Sbjct: 996 MILIGYDDEKGPEVYKTDPAGYYCGFKATSAGSKQLEANGFLEK 865
>37174
Length = 146
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 14 PEGRLYQVEYAMEAIGHAGTCLGILANDGVLL 45
P +L Q+EYA+ A+G +GI A +GV+L
Sbjct: 43 PTAQLVQIEYALAAVGAGAPVVGIKATNGVVL 138
>05451
Length = 769
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 57 DEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLL--QYQEPIPCEQLVTAL 114
DEVF+ +I KL ++ C V I N +TNE R + + +Y + E A
Sbjct: 2 DEVFYRAEIVKLLDEGKCEVHFIDFGNNAITNEFRQLPDELAIAPRYSKHCELESATIAK 181
Query: 115 CDI 117
CD+
Sbjct: 182 CDV 190
>06516
Length = 835
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Frame = +1
Query: 33 TCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRL 92
T + + DGV++ A+ R ++K+ K+ + + C +G +D + + ++
Sbjct: 127 TIMAVEYEDGVVIGADSRTTTGAYIANRVTDKLTKVTDRIYCCRSGSAADTQAIADIVKY 306
Query: 93 IAQRYLLQY-QEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSD 151
Y ++ +EP Q+ TA ++ + + ++ GWDK G Q+Y S
Sbjct: 307 HLDFYRMEMGEEP----QVQTAANVFRELC--YDNRDSLTAGIIVAGWDKRTGGQVY-SV 465
Query: 152 PSGN 155
P G
Sbjct: 466 PIGG 477
>00040
Length = 521
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 74 CSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALC 115
CS+ + D N+ + L+A + E IPC ++V LC
Sbjct: 301 CSLDTMNVDFNIFNGIMTLVALSFSRFSSEEIPCLEIVLILC 426
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|23956078|ref|NP_038881.1| ATP-binding cassette,
sub-family F (GCN20), member 2 [Mus musculus]
(628 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
38795 392 e-109
33929 119 4e-27
03538 117 1e-26
22801 101 1e-21
01623 49 8e-06
05764 44 2e-04
02301 44 3e-04
20290 37 0.029
12308 35 0.064
30281 32 0.72
22529 32 0.86
01142 32 0.86
18248 32 1.1
19618 31 1.6
27295 30 2.4
29130 30 3.7
06358 28 8.1
>38795
Length = 792
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/251 (74%), Positives = 220/251 (87%)
Frame = +1
Query: 192 EKLMELYERLEELDADKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIR 251
++L+ +Y+RL+ELD+ KA +A ILHGLGF+ MQ K+K+FSGGWRMR+ LARAL++R
Sbjct: 7 DRLLAVYDRLDELDSTKALAKAGFILHGLGFSKDMQHTKVKNFSGGWRMRIGLARALYLR 186
Query: 252 PFMLLLDEPTNHLDLDACVWLEEELKTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYY 311
P +LLLDEPTNHLDL+ACVWLEEELK + RILV++SHSQDFLNGVC +IIHM+ KKL+YY
Sbjct: 187 PSLLLLDEPTNHLDLNACVWLEEELKNYPRILVIISHSQDFLNGVCNSIIHMNQKKLQYY 366
Query: 312 TGNYDQYVKTRLELEENQMKRFHWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQKM 371
GNYD YV+TRLEL ENQ KR+ WEQDQI+HMKNYIARFGHGSAKLARQAQSKEKTL+KM
Sbjct: 367 GGNYDSYVQTRLELLENQAKRYKWEQDQISHMKNYIARFGHGSAKLARQAQSKEKTLKKM 546
Query: 372 MASGLTERVVSDKTLSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRV 431
+ GLTE+V SDKTLSFYFP CG IPPPVIMVQ+VSF+Y + P IY NL+FGIDLDTRV
Sbjct: 547 VDGGLTEKVTSDKTLSFYFPSCGTIPPPVIMVQHVSFRYNETKPYIYQNLDFGIDLDTRV 726
Query: 432 ALVGPNGAGKS 442
ALVGPNGAGKS
Sbjct: 727 ALVGPNGAGKS 759
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Frame = +1
Query: 509 GLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFE 568
G + Q + ++N S G + R+ LA + P +L LDEPTNHLD+ L + + +
Sbjct: 94 GFSKDMQHTKVKNFSGGWRMRIGLARALYLRPSLLLLDEPTNHLDLNACVWLEEELKNYP 273
Query: 569 GGMMLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAY 606
++++SH + V I ++ + + G+ +Y
Sbjct: 274 RILVIISHSQDFLNGVCNSIIHMNQKKLQYYGGNYDSY 387
>33929
Length = 408
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +1
Query: 51 ETTGDG-EVDLLTKELEDFEMKKAAARAVTGVLASHPNSTDVHIINLSLTFHGQELLSDT 109
ET G G ++++TK+L++ ++ A R+VTGVLASH +S D+HI N+S+ FHG ELL D+
Sbjct: 82 ETNGTGASIEVVTKQLDEMDIA-AQHRSVTGVLASHGDSRDLHIHNMSILFHGAELLMDS 258
Query: 110 KLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPP 158
KLE+N G+RYGLIGLNG GKS LL+A+ +EV IP+HIDI+ + P
Sbjct: 259 KLEMNVGKRYGLIGLNGCGKSSLLAALANKEVAIPDHIDIFCFGEKCHP 405
>03538
Length = 1974
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 90/177 (50%)
Frame = -1
Query: 438 GAGKSXXXXXXXXXXXXXDGMIRKHSHVKIGRYXXXXXXXXXXXXSPLEYMMKCYPXXXX 497
G GKS G R + +++G+Y SP+EY+ + +
Sbjct: 1971 GVGKSTLLKLLMGDLQPSQGEKRMNHRLRVGKYDQHSADQLNLDESPVEYLKRLFDLQYQ 1792
Query: 498 XXXXXXXXGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETI 557
GR GL R+LS GQ+ RV LA L+ + P +L LDEPTN+LDIE+I
Sbjct: 1791 DARKML--GRVGLASHAHTILNRDLSGGQRARVALAELSCRAPDVLVLDEPTNNLDIESI 1618
Query: 558 DALADAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAYKEHLKSKL 614
DALADAI F GG+++VSHD RLI+ ++WV E TI + GD Y+ L L
Sbjct: 1617 DALADAIKNFTGGVIIVSHDERLIRDTNCQLWVVEDNTINEVDGDFDDYRRELLEAL 1447
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%)
Frame = -1
Query: 213 ASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWL 272
A ++L +G +D SGG R RVALA P +L+LDEPTN+LD+++ L
Sbjct: 1788 ARKMLGRVGLASHAHTILNRDLSGGQRARVALAELSCRAPDVLVLDEPTNNLDIESIDAL 1609
Query: 273 EEELKTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYVKTRLE 324
+ +K F +++VSH + + + + + + G++D Y + LE
Sbjct: 1608 ADAIKNFTGGVIIVSHDERLIRDTNCQLWVVEDNTINEVDGDFDDYRRELLE 1453
>22801
Length = 753
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = -1
Query: 520 RNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGGMMLVSHDFR 579
R+LS GQ+ RV LA L+ + P +L LDEPTN+LDIE+IDALADAI F GG+++VSHD R
Sbjct: 738 RDLSGGQRARVALAELSCRAPDVLVLDEPTNNLDIESIDALADAIKNFTGGVIIVSHDER 559
Query: 580 LIQQVAQEIWVCEKQTITKWPGDILAYKEHLKSKL 614
LI+ ++WV E TI + GD Y+ L L
Sbjct: 558 LIRDTNCQLWVVEDNTINEVDGDFDDYRRELLEAL 454
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%)
Frame = -1
Query: 232 KDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVLVSHSQD 291
+D SGG R RVALA P +L+LDEPTN+LD+++ L + +K F +++VSH +
Sbjct: 738 RDLSGGQRARVALAELSCRAPDVLVLDEPTNNLDIESIDALADAIKNFTGGVIIVSHDER 559
Query: 292 FLNGVCTNIIHMHNKKLKYYTGNYDQYVKTRLE 324
+ + + + + G++D Y + LE
Sbjct: 558 LIRDTNCQLWVVEDNTINEVDGDFDDYRRELLE 460
>01623
Length = 1414
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 522 LSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGGMMLVSHDFRLI 581
LS GQ+ R+ +A +NP +L LDE T+ LD E+ + DA+ + GG +++ RL
Sbjct: 453 LSGGQRQRIAIARAILKNPEILLLDEATSALDAESEYLVQDALEKLMGGRTVITIAHRLS 632
Query: 582 Q-QVAQEIWVCEKQTITKWPG--DILAYKEHLKSKLVDEE 618
+ A +I V + + D++A + + KLV+ +
Sbjct: 633 TIKTANQIAVLTDGVVAEMGSYQDLIAINDGIFRKLVERQ 752
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +3
Query: 234 FSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTF--KRILVLVSH 288
SGG R R+A+ARA+ P +LLLDE T+ LD ++ +++ L+ R ++ ++H
Sbjct: 453 LSGGQRQRIAIARAILKNPEILLLDEATSALDAESEYLVQDALEKLMGGRTVITIAH 623
>05764
Length = 1395
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = -2
Query: 230 KLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFK--RILVLVS 287
K SGG + RVA+ARAL P +LLLDE T+ LD ++ ++ L + R ++++
Sbjct: 725 KGTQLSGGQKQRVAIARALVRNPIILLLDEATSALDTESEKLVQAALDNAREGRTCIVIA 546
Query: 288 H 288
H
Sbjct: 545 H 543
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = -2
Query: 522 LSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGG--MMLVSHDFR 579
LS GQK RV +A +NP +L LDE T+ LD E+ + A++ G ++++H
Sbjct: 713 LSGGQKQRVAIARALVRNPIILLLDEATSALDTESEKLVQAALDNAREGRTCIVIAHRLS 534
Query: 580 LIQQVAQEIWVCEKQTI 596
IQ A I+V E I
Sbjct: 533 TIQN-ADVIFVMENGQI 486
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -2
Query: 104 ELLSDTKLELNSGRRYGLIGLNGIGKSMLLS 134
++L LE+++G+ L+G++G GKS ++S
Sbjct: 1085 QVLKGISLEISAGQTAALVGISGCGKSTIIS 993
>02301
Length = 1098
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = -2
Query: 234 FSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELK--TFKRILVLVSH 288
SGG + R+A+ARAL +P +LLLDE T+ LD + ++ + T R +V+++H
Sbjct: 686 LSGGQKQRLAIARALVRQPAILLLDEATSALDTQSESLVQSAINECTRGRTVVIIAH 516
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = -2
Query: 522 LSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGG--MMLVSHDFR 579
LS GQK R+ +A + P +L LDE T+ LD ++ + AINE G +++++H
Sbjct: 686 LSGGQKQRLAIARALVRQPAILLLDEATSALDTQSESLVQSAINECTRGRTVVIIAHRLT 507
Query: 580 LIQQVAQEIWVCEKQTITK 598
+++ A + V K + +
Sbjct: 506 TVEK-ADRVLVINKGRVVE 453
>20290
Length = 1550
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Frame = +3
Query: 519 IRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEF----EGGMMLV 574
++NLS G+ RV L + + +DEP+ +LD E A I + + +V
Sbjct: 1038 VQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRYILHAKKTGFVV 1217
Query: 575 SHDFRLIQQVAQEIWVCEKQ----TITKWPGDIL 604
HDF + +A + V E Q T+ P +L
Sbjct: 1218 EHDFIMATYLADRVIVIEGQPSVKTVAYSPQSLL 1319
>12308
Length = 698
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 10/187 (5%)
Frame = -3
Query: 92 HIINLS----LTFHGQELLSDTKLELNSGRRYGLIGLNGIGKSMLLSAIGK------REV 141
H+I +T +G L+ + E+ +G + G NG GKS L +G+ +
Sbjct: 543 HVIKFDKVPLVTPNGDVLIPELSFEVKAGMNVLVCGPNGCGKSSLFRILGELWPLFGGSL 364
Query: 142 PIPEHIDIYHLTREMPPSEKTPLQCVMEVDTXXXXXXXXXXXXXXXXXXCEKLMELYERL 201
PE ++++ P + M V T E+ + R
Sbjct: 363 TKPEKGKLFYI----------PQRPYMTVGTLRDQVTYPDSH--------EEQLRKGTRD 238
Query: 202 EELDADKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPT 261
EEL +++ +L G A+Q + SGG + R+A+AR + +P +LDE T
Sbjct: 237 EELADILGKVQLDYVLQREGGWDAVQ-DWMDVLSGGEKQRIAMARLFYHKPQFAILDECT 61
Query: 262 NHLDLDA 268
+ + +D
Sbjct: 60 SAVSVDV 40
>30281
Length = 821
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Frame = -2
Query: 233 DFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRIL-----VLVS 287
+ SGG + RV++ARA++ + LLD+P + +D + ++ +L VLV+
Sbjct: 637 NLSGGQKQRVSVARAVYSDSDVYLLDDPLSAVDSHVGKAIFSKVIGPNGLLRGTTRVLVT 458
Query: 288 HSQDFLNGVCTNIIHMHNK--------KLKYYTGNYDQYVKTRL----ELEENQ 329
H +L V ++ M K +L + G + ++KT L E+EE +
Sbjct: 457 HGVHWLPMVDEILVLMDGKISERGSYEELVSHDGPFAHFLKTYLTEVFEVEEQE 296
>22529
Length = 312
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 538 QNPHMLFLDEPTNHLDIETIDALADAINEFEGG--MMLVSHDFRLIQ 582
+NP +L LDE T+ LD+E+ + DA+++ G ++++H I+
Sbjct: 9 RNPKILLLDEATSALDMESEKTVQDALDKARQGRTTIVIAHRLSTIK 149
>01142
Length = 729
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -1
Query: 521 NLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDAL 560
+LS GQ+ VCLA + +L LDE T +D+ET DAL
Sbjct: 489 SLSVGQRQLVCLARTLLRRSRVLILDEATAAVDMET-DAL 373
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 234 FSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKT 278
S G R V LAR L R +L+LDE T +D++ ++ L++
Sbjct: 486 LSVGQRQLVCLARTLLRRSRVLILDEATAAVDMETDALIQNTLRS 352
>18248
Length = 466
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 229 KKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLD 265
KK K+ SGG RVAL L + L+DEP+ +LD
Sbjct: 355 KKYKNLSGGELQRVALTLCLGKPADVYLIDEPSAYLD 465
>19618
Length = 974
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 234 FSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDA 268
SGG + R+A+AR + +P +LDE T+ + +D
Sbjct: 197 LSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDV 301
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 519 IRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGGMMLVSH 576
I LS G+K R+ +A L + P LDE T+ + ++ + E + VSH
Sbjct: 188 IDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGKMYSYCREVGITLFTVSH 361
>27295
Length = 384
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 506 GRYGLTGKQQVSPIRNLSDGQK-CRVCLAWLAWQNPHMLFLDEPTNHLD 553
G+ +G Q VSP RN G + A L+ +P + +LDEPT+ +D
Sbjct: 237 GKGSRSGVQAVSPGRNTVWGDRNVNSASASLSLVDPRL*YLDEPTSGMD 383
>29130
Length = 436
Score = 29.6 bits (65), Expect = 3.7, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 105 LLSDTKLELNSGRRYGLIGLNGIGKSMLLSAI 136
+L D E+N G + G++G G GKS L A+
Sbjct: 39 VLRDLTYEINPGEKVGIVGRTGAGKSSLTLAL 134
>06358
Length = 1517
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 78 VTGVLASHPNSTDVHIIN-LSLTFHGQEL 105
++ VL HP TD H+ LS+TF G++L
Sbjct: 806 ISQVLRHHPQQTDTHVTQLLSVTFKGRQL 720
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|225543576|ref|NP_032213.2| gene trap locus 3 [Mus
musculus]
(193 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05616 385 e-108
07552 278 1e-75
>05616
Length = 1678
Score = 385 bits (990), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/188 (98%), Positives = 187/188 (99%)
Frame = -1
Query: 1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYIT 60
MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEI GTNVSTT+IT
Sbjct: 1552 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTFIT 1373
Query: 61 CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120
CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT
Sbjct: 1372 CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 1193
Query: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180
MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE
Sbjct: 1192 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 1013
Query: 181 FKLYLPVQ 188
FKLYLP+Q
Sbjct: 1012 FKLYLPLQ 989
>07552
Length = 1455
Score = 278 bits (710), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 132/136 (97%), Positives = 134/136 (98%)
Frame = -2
Query: 55 STTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRV 114
STT+ITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRV
Sbjct: 1454 STTFITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRV 1275
Query: 115 KPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSE 174
KPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSE
Sbjct: 1274 KPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSE 1095
Query: 175 DELPAEFKLYLPVQNK 190
+ELPAEFKLYLPV K
Sbjct: 1094 EELPAEFKLYLPVTKK 1047
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|26326643|dbj|BAC27065.1| unnamed protein product [Mus
musculus]
(836 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
15907 389 e-108
16054 211 1e-54
30195 108 7e-24
26962 32 0.77
>15907
Length = 905
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 177/296 (59%), Positives = 230/296 (77%)
Frame = +1
Query: 538 DASQVIGPLTEGQKRNVGVVNSLFKLHQSVTKVVASQSSFSATAEQTIMSALKTIHDLMG 597
+ASQVIGP + GQ RN VN+LF+ H +V+KV++ + F A ++ ++L+ + LMG
Sbjct: 1 EASQVIGPPSAGQNRNSSTVNTLFQFHMAVSKVLSGLNHFPEEARTSVDASLEKVGQLMG 180
Query: 598 NAIQPLLTSVADAIEAIIITMHQEDFSGASSSSGKPDVPCSLYMKELQGFIARVMNDYFK 657
AI PLL+S++DA+EAII+TMHQEDFSG + + + PCSL+MKELQGFI+R DY
Sbjct: 181 AAISPLLSSLSDALEAIILTMHQEDFSGPAPAGNQEAAPCSLFMKELQGFISRCQADYLS 360
Query: 658 HFECMDFVFDNTEAIAQRAIELFIRNASLIRPLGEGGKLRLAADFAQMELAVGPLCRRVS 717
F C DFV D+ +A+ +ELF+R+ASLIRPLGEGGKLRLAADFAQME+A+ P CRRV+
Sbjct: 361 PFMCRDFVMDHLLPVARHCVELFVRHASLIRPLGEGGKLRLAADFAQMEMAISPFCRRVA 540
Query: 718 DLGKSYRMLRSFRPLLFQTSEHVADSPAVGDIIPFSIIIQFLFTRAPAELKSPFQRAEWS 777
DLG+ YR+LR+FRPLLFQT EHVA SPA+G+IIP+S + FLF RAPAEL+SP Q ++WS
Sbjct: 541 DLGRDYRILRAFRPLLFQTVEHVAQSPALGEIIPYSCALHFLFARAPAELRSPHQVSDWS 720
Query: 778 HARFSQWLDDHPSEKDRLLLLRGALEAYVQSVRSRDGKEFAPVYPIMVQLLQKAMY 833
+R+S WLDDHPSE DRL ++GALEAY + VR R KE+APVYPIM+ LLQK ++
Sbjct: 721 VSRYSAWLDDHPSEADRLQFIKGALEAYAKLVRQRQSKEYAPVYPIMLDLLQKGLH 888
>16054
Length = 739
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 139/212 (65%), Gaps = 15/212 (7%)
Frame = -1
Query: 287 GPGRAAMPTPGSTAGFRASLWTNMEKLMDHICAACGQVQHLQKVLTKKRDPVSHICFIEE 346
GPGRAAM PG+TA RASLWTNMEKLMD I +AC QVQHLQKVL KKRDPV+H+CFI+E
Sbjct: 631 GPGRAAMAAPGNTAAMRASLWTNMEKLMDSIYSACAQVQHLQKVLAKKRDPVTHVCFIDE 452
Query: 347 IIK--DGQPEILYMFWNAVTLALSSHFHSATNSSMFLKQAFEGEYPKLLRLYNDLWKRLQ 404
+ K G I+ FW VT L+ F+ A SS FLKQAFEGEYPKLLRLY DLW+RLQ
Sbjct: 451 LAKHRQGNVNIVQAFWEDVTRMLTKEFNDAAESSSFLKQAFEGEYPKLLRLYCDLWRRLQ 272
Query: 405 QSSQNTQGTFSPSGTPDLCVDLPHMEDDTQDMYRLKRPD---YDPEKALKDSLQPYEAAY 461
Q S T + +G +L P + +D++ YD EKAL+D+L +E AY
Sbjct: 271 QFSL-TMSVSASAGAAELVP--PESTEKEEDIFCAADKTNVAYDSEKALRDTLSEFETAY 101
Query: 462 LSKSLSRLFDP------INLVFPP----GGRN 483
LS+SLSRLF P + L+ PP GG++
Sbjct: 100 LSRSLSRLF*PHQPGVHLQLL*PPHQ*RGGQH 5
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 470 FDPINLVFPPGGRNPPSSDELDGI 493
FDPINLVF +PP+S+E+D I
Sbjct: 75 FDPINLVFTSSSCDPPTSEEVDNI 4
>30195
Length = 294
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 66/85 (77%)
Frame = -2
Query: 33 QAILQDDCYSEFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDKELHLQVVARHED 92
Q I DD + +FL+EDFDVK + ++ I I EQLAKLA+GIS LDKE+H Q+V RH D
Sbjct: 257 QLINNDDAFKQFLSEDFDVKDHANKVIQGMAITEQLAKLAEGISLLDKEIHTQIVNRHGD 78
Query: 93 LLAQATGIESLEGVLQMMQTRIGAL 117
LL+QAT +E+LEGVLQMMQTRI +L
Sbjct: 77 LLSQATSVETLEGVLQMMQTRIQSL 3
>26962
Length = 398
Score = 32.3 bits (72), Expect = 0.77, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 647 FIARVMNDYFKHFECMDFVFDNTEAIA 673
+IA V N +F HF C F+ D +E++A
Sbjct: 102 YIAYVENSFFDHFRCTHFLVDLSESLA 182
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6753670|ref|NP_034202.1| dolichol-phosphate (beta-D)
mannosyltransferase 1 [Mus musculus]
(260 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01373 372 e-108
04191 270 3e-73
20453 55 2e-08
32642 27 9.7
>01373
Length = 1402
Score = 372 bits (955), Expect(2) = e-108, Method: Compositional matrix adjust.
Identities = 171/213 (80%), Positives = 195/213 (91%)
Frame = -2
Query: 48 VKSFSESAINYEIIIIDDGSPDGTREVAEQLAEIYGPDRILLRPREKKLGLGTAYIHGIK 107
K FSES ++EII+IDDGSPDGT +VAE+L IYG DRI+LRPR KKLGLGTAY+HGIK
Sbjct: 1335 CKDFSESGYDFEIIVIDDGSPDGTLQVAEELQRIYGKDRIVLRPRGKKLGLGTAYVHGIK 1156
Query: 108 HATGNYVIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRG 167
HATGN++ IMDAD+SHHPKFIPEFI+KQ+EGN+D+V+GTRY G+GGV+GWDLKRK ISRG
Sbjct: 1155 HATGNFIFIMDADMSHHPKFIPEFIKKQEEGNYDVVTGTRYSGDGGVFGWDLKRKCISRG 976
Query: 168 ANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCVSKGYVFQMEMIVRARQMNYTIGEV 227
ANFITQ+LLRPG SDLTGSFRLYRKEVLQ+LI+ CVSKGYVFQMEMIVRARQ +Y+IGEV
Sbjct: 975 ANFITQVLLRPGVSDLTGSFRLYRKEVLQRLIDSCVSKGYVFQMEMIVRARQFHYSIGEV 796
Query: 228 PISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
PISFVDRVYGESKLGG E+V FLKG+L LFATT
Sbjct: 795 PISFVDRVYGESKLGGQEVVDFLKGVLYLFATT 697
Score = 37.7 bits (86), Expect(2) = e-108, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -3
Query: 26 KYSVLLPTYNERENLPLIVWLLVKSFSE 53
KYSVLLPTY P IVWLLVK F +
Sbjct: 1400 KYSVLLPTYEVEXKPPFIVWLLVKIFQK 1317
>04191
Length = 616
Score = 270 bits (691), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 123/149 (82%), Positives = 140/149 (93%)
Frame = +1
Query: 112 NYVIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFI 171
N++ IMDAD+SHHPKFIPEFI+KQ+EGN+D+V+GTRY G+GGV+GWDLKRK ISRGANFI
Sbjct: 1 NFIFIMDADMSHHPKFIPEFIKKQEEGNYDVVTGTRYSGDGGVFGWDLKRKCISRGANFI 180
Query: 172 TQILLRPGASDLTGSFRLYRKEVLQKLIEKCVSKGYVFQMEMIVRARQMNYTIGEVPISF 231
TQ+LLRPG SDLTGSFRLYRKEVLQ+LI+ CVSKGYVFQMEMIVRARQ +Y+IGEVPISF
Sbjct: 181 TQVLLRPGVSDLTGSFRLYRKEVLQRLIDSCVSKGYVFQMEMIVRARQFHYSIGEVPISF 360
Query: 232 VDRVYGESKLGGNEIVSFLKGLLTLFATT 260
VDRVYGESKLGG E+V FLKG+L LFATT
Sbjct: 361 VDRVYGESKLGGQEVVDFLKGVLYLFATT 447
>20453
Length = 462
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Frame = +2
Query: 28 SVLLPTYNERENLPLIV-----WLLVKSFSESAINYEIIIIDDGSPDGTREVAEQLAEIY 82
SV++P YNE + LP ++ +L K+ + YEII++ DGS D T VA + ++I+
Sbjct: 155 SVIVPAYNEEQRLPAMLDECLGFLNEKAAKQPDFTYEIIVVSDGSSDATVSVALKYSKIH 334
Query: 83 GPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDAD 120
G D+ + + G G A G+ A G ++ DAD
Sbjct: 335 GADKFRVLELVENRGKGGAVRLGMLSARGRQLLFADAD 448
>32642
Length = 627
Score = 26.6 bits (57), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +2
Query: 57 NYEIIIIDDGSPDGTREVAEQLAEIYGPDRILLRPRE----KKLGLGTAYIHGIKHATGN 112
N ++I D+GSP GTR I P +LR +E K L L T ++ I
Sbjct: 200 NNVVLIEDNGSPVGTR--------ITVPVPSMLRSKEGDFTKILSLATKFV*AIIWGVYF 355
Query: 113 YVIIMDADLSHHPKFIPEFIRKQK 136
YV+ D ++P Q+
Sbjct: 356 YVLSSFEDPPRQMTYVPHLSYXQQ 427
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|76559903|ref|NP_079681.2| hypothetical protein
LOC66184 [Mus musculus]
(262 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02793 388 e-108
33444 126 7e-30
00106 112 2e-25
24890 59 2e-09
36799 28 4.5
>02793
Length = 980
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/259 (70%), Positives = 218/259 (84%)
Frame = -3
Query: 3 RGPKKHLKRVAAPRHWMLDKLTGVFAPRPSAGPHRLRECLPLAIFLRNRLKYALTGDEVK 62
RG +K LKR AP+ WMLDKL G FAP+PSAGPH+ RECLP+AI LRNRLKYALT DE K
Sbjct: 870 RGRRKSLKRCTAPKSWMLDKLGGNFAPKPSAGPHKSRECLPMAILLRNRLKYALTYDECK 691
Query: 63 KICMQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYK 122
KI MQRL+KVDG+VRTD YP GFMDVI+I+++ E FR++YD KGRF VHRI EEAKYK
Sbjct: 690 KIVMQRLVKVDGRVRTDKTYPCGFMDVITIERTNEFFRILYDVKGRFVVHRIKAEEAKYK 511
Query: 123 LCKVRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDSGKITDAIKFDTGNLCM 182
LC+V++V VG KG+P +VT D RTIRYPDPL+KVND++ + + +GK+ D IKFD+GNL M
Sbjct: 510 LCRVKRVQVGPKGVPFIVTDDGRTIRYPDPLVKVNDSIVLDIATGKMKDFIKFDSGNLVM 331
Query: 183 VTGGANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGK 242
VTGG NLGR+G IT+RERHPGSFD+VH+KD G+ FATRLS +FVIGKG+K WISLP+GK
Sbjct: 330 VTGGHNLGRVGTITHRERHPGSFDIVHIKDTLGHTFATRLSYVFVIGKGSKQWISLPKGK 151
Query: 243 GIRLTIAEERDKRLAAKQS 261
G+RLTIAEERD+RLAAK
Sbjct: 150 GVRLTIAEERDRRLAAKSQ 94
>33444
Length = 354
Score = 126 bits (317), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 70/75 (93%)
Frame = -1
Query: 185 GGANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGI 244
GG NLGR+G + NRERHPGSFD+VH+KD+ G+ FATRL+N+F+IGKGNKP+ISLP+GKG+
Sbjct: 354 GGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGV 175
Query: 245 RLTIAEERDKRLAAK 259
+L+I+EERDKRLAAK
Sbjct: 174 KLSISEERDKRLAAK 130
>00106
Length = 473
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 61/68 (89%)
Frame = +2
Query: 194 VITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD 253
++T+RERHPGSFD+VH+KD G+ FATRLS +FVIGKG+K WISLP+GKG+RLTIAEERD
Sbjct: 182 LLTHRERHPGSFDIVHIKDTLGHTFATRLSYVFVIGKGSKQWISLPKGKGVRLTIAEERD 361
Query: 254 KRLAAKQS 261
+RLAAK
Sbjct: 362 RRLAAKSQ 385
>24890
Length = 425
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 3 RGPKKHLKRVAAPRHWMLDKLTGVFAPRPSAGPHRLRE 40
RG +K LKR AP+ WMLDKL G FAP+PSAGPH+ RE
Sbjct: 310 RGRRKSLKRCTAPKSWMLDKLGGNFAPKPSAGPHKSRE 423
>36799
Length = 646
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 208 VHVKDANGNGFATRLSNIFVIGKGNKPWIS 237
+HV++ N N F R+ N ++ PWIS
Sbjct: 374 IHVQELNPNHFDARVINASLLRSARCPWIS 285
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|190684669|ref|NP_906273.3| erythrocyte protein band
4.1 isoform 1 [Mus musculus]
(858 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00990 384 e-107
18811 186 3e-47
11374 177 2e-44
17332 146 3e-35
13951 54 1e-16
28244 77 4e-14
08363 65 8e-11
03469 64 2e-10
05888 49 7e-06
12829 30 3.1
>00990
Length = 3161
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/368 (49%), Positives = 260/368 (70%), Gaps = 5/368 (1%)
Frame = +3
Query: 179 EECSGTEVKEDPESRAEREPEASQKPVRRHRNMHCKVSLLDDTVYECVVEKHAKGQDLLK 238
++ S +EV E+ + ++ S + R + + +V LLD ++++A+G++L
Sbjct: 162 DKIS*SEV*EESQ*NGRQDGSKSPQKQRTGKGFNYEVVLLDGEHVNFELDRNAEGRELFD 341
Query: 239 RVCEHLNLLEEDYFGLALWDSATS---KTWLDSAKEIKKQVRGVPWNFTFNVKFYPPDPA 295
+VC+HL+L+E+DYFGL D S K WL K I KQ +G PW F F +KFYPPDP
Sbjct: 342 KVCQHLDLIEKDYFGLQFVDERISNHLKCWLSPDKRISKQKKGGPWLFDFALKFYPPDPT 521
Query: 296 QLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELH-GMDYVSDF 354
QL E +TR+ + LQ R+DI++G+LP ++ T A+LGSY +Q+++GDYDP H G++Y+ D
Sbjct: 522 QLRESLTRWLVVLQTRRDILSGKLPATYLTQAMLGSYCVQADVGDYDPNEHRGVEYIRDT 701
Query: 355 KLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAKDLEGVDIIL 414
APNQT +L EK++ELH+ ++ TP +A+ FLENAKKL+MYGVDLH A+D+ VDI+L
Sbjct: 702 PFAPNQTIDLLEKIVELHRQHKGQTPDEAETNFLENAKKLAMYGVDLHAAQDVNNVDIML 881
Query: 415 GVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEHYESTIGFKLPSYRAA 474
GVC+SGL VY++KLRI+RF WPK+LKISYKR F+IK+RP + E++ FKL ++R A
Sbjct: 882 GVCASGLQVYREKLRISRFVWPKILKISYKRRQFYIKVRPSDNSAMENSFCFKLATHRLA 1061
Query: 475 KKLWKVCVEHHTFFRLTSTD-TIPKSKFLALGSKFRYSGRTQAQTRQASALIDRPAPHFE 533
K+LWK+CVEHH FFRL + + + F LGSKFRYSGRT QTRQ+S ++DRP P+FE
Sbjct: 1062KRLWKICVEHHAFFRLREAEQSQNAAMFPRLGSKFRYSGRTLYQTRQSSQILDRPNPYFE 1241
Query: 534 RTASKRAS 541
R+ R+S
Sbjct: 1242RSQPARSS 1265
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 802 KGGISETRIEKRIVITG--DADIDHDQVLVQAIKEAKEQHPDMSVTKVVVHQETE 854
K GI TR+E ++V++ D + D+D L AI+ E +PDMSV ++ Q+ E
Sbjct: 2145 KDGIQHTRVEHKVVLSSADDEEFDYDAALADAIRSVTEFNPDMSVERIECVQQIE 2309
>18811
Length = 478
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 108/134 (80%)
Frame = -2
Query: 346 HGMDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAK 405
HG DY+ D APNQ EL EK++ELH+ ++ TP +A++ +LENAKKLSMYGVDLH A+
Sbjct: 402 HGADYIKDIPFAPNQAPELLEKIVELHRQHKGQTPDEAEVNYLENAKKLSMYGVDLHAAQ 223
Query: 406 DLEGVDIILGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEHYESTIG 465
D+ VDI+LGVCSSGL VY+DKLRI+RF WPK++KISYKR F++K+RP + + E+++
Sbjct: 222 DVNNVDIMLGVCSSGLQVYRDKLRISRFVWPKIIKISYKRKHFYVKVRPADNKGLETSVS 43
Query: 466 FKLPSYRAAKKLWK 479
F+LP++R AK+LWK
Sbjct: 42 FRLPTHRLAKRLWK 1
>11374
Length = 800
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 104/140 (74%), Gaps = 1/140 (0%)
Frame = +3
Query: 401 LHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEHY 460
LH A+D+ VDI+LGVC+SGL VY++KLRI+RF WPK+LKISYKR F+IK+RP +
Sbjct: 3 LHAAQDVNNVDIMLGVCASGLQVYREKLRISRFVWPKILKISYKRRQFYIKVRPSDNSAM 182
Query: 461 ESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTD-TIPKSKFLALGSKFRYSGRTQAQTR 519
E++ FKL ++R AK+LWK+CVEHH FFRL + + + F LGSKFRYSGRT QTR
Sbjct: 183 ENSFCFKLATHRLAKRLWKICVEHHAFFRLREAEQSQNAAMFPRLGSKFRYSGRTLYQTR 362
Query: 520 QASALIDRPAPHFERTASKR 539
+S +DRP P+FER+ R
Sbjct: 363 HSSQTLDRPDPYFERSQPAR 422
>17332
Length = 473
Score = 146 bits (369), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/157 (47%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Frame = +2
Query: 219 DDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLALWDSATSKTWLDSAKEIKKQVRG 278
DD+ ++ V+ + KG L ++VCE LNL E+DYFGL D++ WLD K + Q++G
Sbjct: 2 DDSDHQLQVKGNWKGILLQEKVCELLNLHEKDYFGLRFIDASGQTHWLDGNKSLSSQLKG 181
Query: 279 --VPWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQS 336
P F VKFY DP +L E+ITRY LQ++QDI+ GRLP +F + L +Y +QS
Sbjct: 182 CQTPHKLYFGVKFYAADPCKLREEITRYLFFLQVKQDILQGRLPVTFDEASELCAYAVQS 361
Query: 337 ELGDYDPELHGMDYVSDFKLAPNQTKELEEKVMELHK 373
ELGD+DP H YVS+F PNQT+ELE +V LH+
Sbjct: 362 ELGDFDPRQHTDGYVSEFCFIPNQTEELERRVAGLHR 472
>13951
Length = 720
Score = 53.5 bits (127), Expect(2) = 1e-16, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = -2
Query: 190 PESRAEREPEASQKPVRRHRNMHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEE 249
P ++ + S + R + + +V LLD ++++A+G++L +VC+HL+L+E+
Sbjct: 455 PSEMGDKTEDKSPQKQRTGKGFNYEVVLLDGEHVNFELDRNAEGRELFDKVCQHLDLIEK 276
Query: 250 DYFGLALWDSATS---KTWLDSAKEIKK 274
DYFGL D S K WL K I K
Sbjct: 275 DYFGLQFVDERISNHLKCWLSPDKRISK 192
Score = 51.6 bits (122), Expect(2) = 1e-16, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = -1
Query: 270 KEIKKQVRGVPWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRL 319
K+ + + +G PW F F +KFYPPDP QL E +TR+ + L VAG L
Sbjct: 204 KDFQNRKKGGPWLFDFALKFYPPDPTQLRESLTRWLVVLH-----VAGEL 70
>28244
Length = 422
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Frame = -1
Query: 422 LVYKDKLRINRFPWPKVLKISYKRSSF-FIKIRPGEQEHYESTIG-FKLPSYRAAKKLWK 479
LV++ +I F WPK+ ++ +K + + E + I F+L S +A K LWK
Sbjct: 422 LVFEGNXKIGLFFWPKMTRLDFKGKKLTLVAVEDDENGQSQDHIFVFRLQSEKACKHLWK 243
Query: 480 VCVEHHTFFRLTSTDTIPKSK--FLALGSKFRYSGRTQAQTRQASALIDRPAPHFERTAS 537
VEHH FFRL P ++ F +GS+FRYSGRT+ QT + R + FER S
Sbjct: 242 CAVEHHAFFRLKGPVQGPNARQNFFRMGSRFRYSGRTEYQTSTMNRA--RRSVKFERKPS 69
Query: 538 KRAS 541
+R S
Sbjct: 68 QRYS 57
>08363
Length = 1878
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = +1
Query: 723 PPLVKTQTVTISDTANAVKSEIPTKDVPIVHTETKTITYEAAQTEDSNGDLDPGVLLXXX 782
PP V T++V V +PTK+VP+V TET+T+TYE E D + GVL+
Sbjct: 115 PPTVATESVHYQPDVEEVP--VPTKNVPLVKTETRTVTYER---EGFPFDGEDGVLVSAS 279
Query: 783 XXXXXXXXXXXXXXXXXXVKGGISETRIEKRIVITG-DADIDHDQVLVQAIKEAKEQHPD 841
K G+ ETR+E R+V++ D D D+D L AI+ E +PD
Sbjct: 280 SHSTRMQTIETTTYKTE--KDGVQETRVEHRVVLSSTDDDFDYDAALADAIRSVTEFNPD 453
Query: 842 MSVTKVVVHQETE 854
MSV ++ Q E
Sbjct: 454 MSVERIECVQXIE 492
>03469
Length = 1275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = -3
Query: 744 IPTKDVPIVHTETKTITYEAAQTEDSNGDLDPGVLLXXXXXXXXXXXXXXXXXXXXXVKG 803
+PTK+VP+V TET+T+TYE E D + GVL+ K
Sbjct: 1258 VPTKNVPLVKTETRTVTYER---EGFPFDGEDGVLVSASSHSTRMQTIETTTYKTE--KD 1094
Query: 804 GISETRIEKRIVITG-DADIDHDQVLVQAIKEAKEQHPDMSVTKVVVHQETE 854
G+ ETR+E R+V++ D D D+D L AI+ E +PDMSV ++ Q+ E
Sbjct: 1093 GVQETRVEHRVVLSSTDDDFDYDAALADAIRSVTEFNPDMSVERIECVQQIE 938
>05888
Length = 490
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = -2
Query: 504 LGSKFRYSGRTQAQTRQASALIDRPAPHFERTASKR 539
LGSKFRYSGRT Q R +S +DRP P+FER+ R
Sbjct: 489 LGSKFRYSGRTLYQARHSSQTLDRPDPYFERSQPAR 382
>12829
Length = 2357
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 126 EDIILKAPIAAPEPELKTDPSLDLHSLSSIETQPAQEEHR 165
E+I+L +P+A+P+P+ PS+ + + S Q A+ R
Sbjct: 1669 EEIVLVSPLASPQPDFPMSPSVSVLGVPSPRIQTARSPSR 1550
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|20270275|ref|NP_620084.1| methylenetetrahydrofolate
dehydrogenase 1 [Mus musculus]
(935 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11972 385 e-107
06310 207 2e-53
05632 87 2e-17
32635 32 0.99
14749 32 0.99
07549 31 2.5
>11972
Length = 736
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/239 (77%), Positives = 207/239 (86%)
Frame = -3
Query: 550 PTEKGHTRTAQFDISVASEIMAVLALTSSLEDMRERLGRMVVASSKKGEPISCEDLGVSG 609
P EK TR QFDI+VASEIMA+LALTS L DMRERLG+MVVASSK GEP++ +DLGVSG
Sbjct: 734 PQEKNMTRETQFDITVASEIMAILALTSDLRDMRERLGKMVVASSKAGEPVTADDLGVSG 555
Query: 610 TLTVLMKDAIKPNLMQTLEGTPVFVHAGPFANIAHGNSSIIADRIALKLVGPEGFVVTEA 669
LTVLM+DA++PNLMQTLEGTPVFVHAGPFANIAHGNSSI+AD++ALK+VG +GFVVTEA
Sbjct: 554 ALTVLMRDALRPNLMQTLEGTPVFVHAGPFANIAHGNSSILADKLALKIVGEKGFVVTEA 375
Query: 670 GFGADIGMEKFFNIKCRYSGLQPHVVVLVATVRALKMHGGGPTVTAGLPLPKAYTEEDLD 729
GFGADIGMEKFFNIKCRYSGL P+ VVLVATVRALKMHGGGPTVTAG+PLPK YTEE+L+
Sbjct: 374 GFGADIGMEKFFNIKCRYSGLVPNAVVLVATVRALKMHGGGPTVTAGVPLPKDYTEENLE 195
Query: 730 LVEKGFSNLRKQIENARMFGXXXXXXXXXFKTDTDAELDLVSRLSREHGAFDAVKCTHW 788
LVEKG SNL KQIENA FG F TDT AEL+LV RL+RE+GAFDAV +HW
Sbjct: 194 LVEKGCSNLLKQIENANYFGIPVVVAVNAFATDTQAELELVQRLARENGAFDAVISSHW 18
>06310
Length = 1575
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 112/126 (88%)
Frame = +2
Query: 809 PSSFQLLYDLKLSIEDKIRIIAQRIYGADDIELLPEAQNKAEIYTKQGFGNLPICMAKTH 868
PS+FQ LYD+KL IE+KI IIA++IYGAD +EL P A+ + E YT+QGF +LPICMAKTH
Sbjct: 8 PSNFQFLYDVKLPIEEKIAIIAKKIYGADGVELEPLAKEQVERYTRQGFNDLPICMAKTH 187
Query: 869 LSLSHNPEQKGVPTGFVLPIRDIRASVGAGFLYPLVGTMSTMPGLPTRPCFYDIDLDPET 928
LSLSH PE+KG P GFVLPIR++RAS+GAGF+YPL+GTMSTMPGLPTRPCFYDID+DP+T
Sbjct: 188 LSLSHMPEKKGAPKGFVLPIREVRASIGAGFIYPLIGTMSTMPGLPTRPCFYDIDIDPDT 367
Query: 929 EQVNGL 934
E++ GL
Sbjct: 368 EEIVGL 385
>05632
Length = 930
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/45 (77%), Positives = 44/45 (97%)
Frame = -1
Query: 890 DIRASVGAGFLYPLVGTMSTMPGLPTRPCFYDIDLDPETEQVNGL 934
++RAS+GAGF+YPL+GTMSTMPGLPTRPCFYDID+DP+TE++ GL
Sbjct: 930 EVRASIGAGFIYPLIGTMSTMPGLPTRPCFYDIDIDPDTEEIVGL 796
>32635
Length = 574
Score = 32.3 bits (72), Expect = 0.99, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 885 VLPIRDIRASVGAGFLYPLVGTMSTMPGLPTRPCFYDID 923
+ P+RD+R+S G +L +T+ +P+R YD+D
Sbjct: 22 LFPVRDMRSSSGDSYLMNTHKFSNTVLAMPSRRQLYDVD 138
>14749
Length = 810
Score = 32.3 bits (72), Expect = 0.99, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 885 VLPIRDIRASVGAGFLYPLVGTMSTMPGLPTRPCFYDID 923
+ P+RD+R+S G +L +T+ +P+R YD+D
Sbjct: 517 LFPVRDMRSSSGDSYLMNTHKFSNTVLAMPSRRQLYDVD 401
>07549
Length = 949
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 151 GCLELIKEAGVQIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198
G L+L+K G RH + + + +G P H WN+ T +K
Sbjct: 649 GRLDLVKNEGTXAEPRHHKPIDQPRPLGKPPHSHRQWNSVGHTDAKAK 792
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|56699423|ref|NP_035020.2| neural precursor cell
expressed, developmentally down-regulated gene 4 [Mus musculus]
(887 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05501 387 e-107
02386 305 6e-83
13725 219 4e-57
21239 103 3e-22
26162 88 2e-17
19738 79 8e-15
29179 65 1e-10
05524 52 1e-09
33148 50 4e-06
28454 44 4e-04
37652 43 7e-04
30322 39 0.009
31463 39 0.009
19350 39 0.011
01494 38 0.017
07591 37 0.032
13896 36 0.065
22144 36 0.087
14539 35 0.095
25750 35 0.13
12851 35 0.14
00178 35 0.16
30040 34 0.27
28393 31 1.7
01656 30 2.9
06273 30 5.9
18322 29 6.6
20379 29 7.9
25445 29 8.4
>05501
Length = 1740
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/345 (54%), Positives = 254/345 (73%), Gaps = 2/345 (0%)
Frame = -1
Query: 541 EDSYRRIMGVKRADLLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSAT 600
EDS+ +IM ++ DL + RL+I F GE+GLDYGGVAREWFF +S ++ NP Y LFEY++
Sbjct: 1680 EDSFAQIMRLQPFDL-RRRLYIIFKGEEGLDYGGVAREWFFHLSHDVLNPMYCLFEYASN 1504
Query: 601 DNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLQKLITLHD 660
+NY+LQINP S + N DHL YF+FIGR MA+YHGK +D F PFYK ML K +TL D
Sbjct: 1503 NNYSLQINPASSV-NPDHLLYFRFIGRFIAMALYHGKFIDSGFTLPFYKRMLSKKLTLKD 1327
Query: 661 MESVDSEYYSSLRWILENDPTE--LDLRFIIDEELFGQTHQHELKTGGSEIVVTNKNKKE 718
+E++D EY+ SL+W+ +N+ E L+L F D E+ G+ HELK GGSEI VT +NK+E
Sbjct: 1326 LETIDGEYFQSLQWVKDNNVEESGLELFFCADFEVLGKVENHELKPGGSEIKVTEENKEE 1147
Query: 719 YIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREH 778
Y+ L+ QWRF +++Q AF EGF E++P ++ FDE ELEL++CG+ +VDV+DW +
Sbjct: 1146 YLNLMTQWRFSRGVEEQTKAFLEGFNEVVPLQWLQYFDERELELMLCGMQEVDVDDWERN 967
Query: 779 TKYKNGYSMNHQVIHWFWKAVWMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQSFT 838
T Y++ Y N + + WFWK V +D+EKR RLLQFVTGT R+P+ GFAEL GSNGPQ F
Sbjct: 966 TIYRH-YQRNSKQVTWFWKFVREIDNEKRTRLLQFVTGTCRLPVGGFAELMGSNGPQRFC 790
Query: 839 VEQWGTPDKLPRAHTCFNRLDLPPYESFDELWDKLQMAIENTQGF 883
+E+ G LPR+HTCFNR+DLPPY S+++L +KL +AIE T+GF
Sbjct: 789 IEKVGKETWLPRSHTCFNRIDLPPYRSYEQLVEKLNLAIEETEGF 655
>02386
Length = 2222
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 168/389 (43%), Positives = 244/389 (62%), Gaps = 13/389 (3%)
Frame = +2
Query: 508 DYKRKYEFFRRKLKK------QTDIPNKFEMKLRRANILEDSYRRIMGVKRADLLKARLW 561
D KR+Y FR++L++ + D+P + +RR ++ EDS+R + + D K R +
Sbjct: 263 DVKRRY--FRQELERMEEGMRREDLP----VHVRREHVFEDSFRELFR-RNPDEWKQRFY 421
Query: 562 IEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSY 621
I F+GE+G D GG+ REW+ +IS+E+FN Y LF+ D T INP+S N +HLSY
Sbjct: 422 IVFEGEEGQDAGGLLREWYLIISREIFNENYVLFKRYPRDGVTYTINPSSHF-NSNHLSY 598
Query: 622 FKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLQKLITLHDMESVDSEYYSSLRWILENDPT 681
FKF+GR+ A+Y KLL+ +F R FYK +L + DME D +Y SL ++LEND T
Sbjct: 599 FKFVGRIIAKAIYDNKLLECYFTRSFYKHVLGLPVKYTDMECEDIMFYQSLVFLLENDIT 778
Query: 682 EL-----DLRFIIDEELFGQTHQHELKTGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQM 736
++ DL F + E FG +L GS I VT +NK+EY+ LV Q + I++Q+
Sbjct: 779 DMGAALGDLNFSAEVEEFGVRETRDLIENGSNIGVTEENKREYVKLVCQMKMTGAIRQQL 958
Query: 737 AAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKYKNGYSMNHQVIHWFW 796
AF EGF+++IP+ L+ IF E ELELL+ GL +D++D + +T+Y + Y I WFW
Sbjct: 959 NAFLEGFYDIIPKKLVAIFTEQELELLISGLPTIDIDDLKANTEY-HKYQPTSLQIQWFW 1135
Query: 797 KAVWMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQSFTVEQWG-TPDKLPRAHTCF 855
+A+ D +R LQFVTGTS+VP+ GFA L G NG Q F + + + D+LP AHTCF
Sbjct: 1136RALRSFDQAERANFLQFVTGTSKVPLQGFATLEGMNGHQKFQIHRDDRSTDRLPSAHTCF 1315
Query: 856 NRLDLPPYESFDELWDKLQMAI-ENTQGF 883
N+LDLP YE++D+L L +A+ E ++GF
Sbjct: 1316NQLDLPAYETYDKLRKMLLLAVSECSEGF 1402
>13725
Length = 700
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/225 (50%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Frame = +2
Query: 532 MKLRRANILEDSYRRIMGVKRADLLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPY 591
+++ R I EDSYR++M + R+ L+ RL ++F GE+GLDYGGVAREWF+L+S EM NPY
Sbjct: 56 LEVSREEIFEDSYRQVMKM-RSKELRKRLMVKFHGEEGLDYGGVAREWFYLLSHEMLNPY 232
Query: 592 YGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMM 651
YGLF+YS D YTLQINP+SG+ N +HLSYF F+GRV GMA++HG LDG F PFYK +
Sbjct: 233 YGLFQYSREDIYTLQINPDSGV-NPEHLSYFHFVGRVIGMAIFHGHYLDGGFTMPFYKQL 409
Query: 652 LQKLITLHDMESVDSEYYSSLRWILEND-PTELDLRFIIDEELFGQTHQHELKTGGSEIV 710
L K TL D+ESVD + + SL W+LEN+ L+ F ++ FG+ ++ELK GG++
Sbjct: 410 LGKPATLEDLESVDPDLHRSLCWMLENNIENVLEHTFSVEHNSFGKLREYELKPGGNDTK 589
Query: 711 VTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIF 755
VT NK EY+ L + WR + I+ Q A + +DL+K F
Sbjct: 590 VTEDNKHEYVRLYVHWRLMRGIEAQFLA--------LXKDLMKSF 700
>21239
Length = 1264
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Frame = +1
Query: 701 ELKTGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENEL 760
ELK GG +I VT N EY+ LVI W V + +Q AF+EGF + ++ F EL
Sbjct: 121 ELKKGGKDIPVTLHNLHEYLQLVIHWSLVEGVSRQFEAFREGFESVFSLSSLQCFYPEEL 300
Query: 761 ELLMCG--LGDVDVNDWREHTKYKNGYSMNHQVIHWFWKAVWMMDSEKRIRLLQFVTGTS 818
E L CG G +V E+ + +GY+ + + + + ++ + D +++ LQFVTG+
Sbjct: 301 EQLFCGSQWGPWEVKMLMENCRPDHGYTHDSKAVVFLYQLLASFDLQQQRHFLQFVTGSP 480
Query: 819 RVPMNGFAELYGSNGPQSFTVEQWGTPDK-LPRAHTCFNRLDLPPYESFDELWDKLQMAI 877
R+P+ GF L T E PD LP TC N L LP Y S D + KL A
Sbjct: 481 RLPVGGFRSLTPPLTIVRKTFEAGENPDDFLPSVMTCVNYLKLPDYSSIDIMRHKLHTAA 660
Query: 878 ENTQ 881
Q
Sbjct: 661 SEGQ 672
>26162
Length = 608
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Frame = +1
Query: 362 LAVCGNPATSQPVTS-----SNHSSRGGSLQTCIFEEQPTLPVLLPTSSGLPPGWEEKQD 416
L G+ +T+ P + +R S F + T LP GWE + D
Sbjct: 28 LPTSGDGSTASPADPDHPLPNGWEARKDSQGRTYFVDHNTRTTTWERPQPLPAGWERRID 207
Query: 417 DRGRSYYVDHNSKTTTWSKPTMQD-------------------DPRSKIPAHLRGKTDSN 457
GR YYVDHN++TTTW +P + + R P + D++
Sbjct: 208 QHGRVYYVDHNTRTTTWQRPNTEMVTNWNNWQQWRNNRTMDAMNQRFLFPQTAQPSVDND 387
Query: 458 DLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRLQNVAITGP 501
LGPL GWE+RT GRV+F+NH + TQWEDPR Q V P
Sbjct: 388 PLGPLLDGWEKRTDATGRVYFVNHKNRTTQWEDPRTQGVMQEDP 519
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 75/188 (39%), Gaps = 9/188 (4%)
Frame = +1
Query: 254 GWEERQDVLGRTYYVNHESRRTQWKRPSPXXXXXXXXXXXMQL-----QAQRAFTTRRQI 308
GWE R+D GRTY+V+H +R T W+RP P R T +R
Sbjct: 91 GWEARKDSQGRTYFVDHNTRTTTWERPQPLPAGWERRIDQHGRVYYVDHNTRTTTWQRPN 270
Query: 309 SEDVDGPDNRESPENWEIVREDENTEYSGQAVQSP----PSGHIDVQTHLAEEFNTRLAV 364
+E V + NW+ R + + Q P PS D L + + R
Sbjct: 271 TEMV------TNWNNWQQWRNNRTMDAMNQRFLFPQTAQPSVDNDPLGPLLDGWEKRTDA 432
Query: 365 CGNPATSQPVTSSNHSSRGGSLQTCIFEEQPTLPVLLPTSSGLPPGWEEKQDDRGRSYYV 424
G V NH +R T +E+ T V+ L GWE + G Y+V
Sbjct: 433 TGR------VYFVNHKNR-----TTQWEDPRTQGVMQ--EDPLQEGWEMRYTQEGVRYFV 573
Query: 425 DHNSKTTT 432
DHN++TTT
Sbjct: 574 DHNTRTTT 597
>19738
Length = 375
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Frame = +2
Query: 701 ELKTGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENEL 760
EL GG I VTNKNK Y+ + Q+R +++++ +F G ELIP +L+ IFDE EL
Sbjct: 8 ELMPGGGNIRVTNKNKLSYLDCLAQYRLATSVKEEVESFLRGLNELIPDNLLSIFDEYEL 187
Query: 761 ELLMCGLGDVDVNDWREH 778
ELLMCG+G + D++ H
Sbjct: 188 ELLMCGMGTYSLADFKIH 241
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
Frame = +1
Query: 768 GDVDVNDWREHTKYKNGYSMNH---------QVIHWFWKAVWMMDSEKRIRLLQFVTGTS 818
G VDV W H + +H +V+ WFW + E+ RLLQF TG S
Sbjct: 187 GVVDV--WHGHVQSGRLQDSSHRVRPJPSFNKVLDWFWTVIASFTEEQMARLLQFTTGCS 360
Query: 819 RVP 821
++P
Sbjct: 361 QLP 369
>29179
Length = 1113
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Frame = -3
Query: 82 VKVIAGIGLAKKDILGASDPYVRVTLY-DPMSGILTSVQTKTIKKSLNPKWNEEILFRVL 140
+++I + L KD+ G SDPYV++ L D +LT V+ K++LNP WNE LF
Sbjct: 487 LRIIRAVDLPAKDVTGTSDPYVKILLLPDKKHKLLTKVK----KRNLNPHWNECFLFEGW 320
Query: 141 PQ----RHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHK 196
P + +V D +R +RDD +G+ +PL E + P ++K L P
Sbjct: 319 PHNKLLEKTLYLQVIDYDRFSRDDPIGETYLPL----NEIDLSQSPVSWK--YLQPCKDT 158
Query: 197 SRVKGYLRLKMTYLPKNGSEDENADQAEELE 227
G L L M Y PK+ S + + + E
Sbjct: 157 RGKLGELLLSMCYQPKHWSSHRDRHEGQGTE 65
>05524
Length = 2623
Score = 52.0 bits (123), Expect(2) = 1e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +2
Query: 763 LMCGLGDVDVNDWREHTKYKNGYSMNHQVIHWFWKAVWMMDSEKRIRLLQFVTGTSRVPM 822
L CG D+ + + YK G ++ WFW+ + + +R L+FV G +R+P
Sbjct: 485 LWCGSPDIPLTLLKSVATYK-GIEATAPLVQWFWEVMDEFSTAERSLFLRFVWGRTRLP- 658
Query: 823 NGFAELYGSNGPQSFTVEQWGTPDK-LPRAHTCFNRLDLPPYESFDELWDKLQMAIENTQ 881
A+ G + ++++ PD LP ++TCF L +P Y L +KL+ AI +
Sbjct: 659 RTIADFRGRDFVLQ-VLDKYNPPDHFLPESYTCFFLLKMPRYSDKLVLKEKLKYAIHFCK 835
Query: 882 GFDGVD 887
D D
Sbjct: 836 SIDTDD 853
Score = 29.6 bits (65), Expect(2) = 1e-09, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 715 NKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLM 764
N+ +YI + I +R +Q+ +EG +IP L+ +F ELE ++
Sbjct: 346 NRADYIKMAINYRL-QEFDQQVRWVREGMSRVIPVPLLSLFTGLELETMV 492
>33148
Length = 687
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 43/93 (46%)
Frame = +3
Query: 792 IHWFWKAVWMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQSFTVEQWGTPDKLPRA 851
+ +FW+A+ +E R R L+FVTG R+P P + + T D LP +
Sbjct: 66 VKYFWEAMKAFSNEDRSRFLRFVTGRRRLP-----------APLVISTGKGDTIDSLPES 212
Query: 852 HTCFNRLDLPPYESFDELWDKLQMAIENTQGFD 884
TC N L LP Y S +KL+ A N D
Sbjct: 213 STCANMLYLPYYSSAKVAEEKLRYAAYNCIAID 311
>28454
Length = 472
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -2
Query: 461 PLPPGWEERTHTDGRVFFINHNIKKTQWEDPRL--QNVAITGPAVPYSRDY-KRKYEFFR 517
PLP GWE R + GR+F+I+H + T W+ P++ QNV R R+Y+ R
Sbjct: 306 PLPSGWEARVDSHGRIFYIDHMNRTTTWQRPQVGTQNVQRRPTLSSEQRQQLDRRYQSIR 127
Query: 518 RKLKK 522
R + +
Sbjct: 126 RTITQ 112
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -2
Query: 407 LPPGWEEKQDDRGRSYYVDHNSKTTTWSKPTM 438
LP GWE + D GR +Y+DH ++TTTW +P +
Sbjct: 303 LPSGWEARVDSHGRIFYIDHMNRTTTWQRPQV 208
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 254 GWEERQDVLGRTYYVNHESRRTQWKRP 280
GWE R D GR +Y++H +R T W+RP
Sbjct: 294 GWEARVDSHGRIFYIDHMNRTTTWQRP 214
>37652
Length = 229
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -3
Query: 458 DLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDP 491
D LP GWEER GRV ++NH + TQWE P
Sbjct: 107 DPNELPEGWEERRSASGRVHYVNHVTRTTQWETP 6
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -3
Query: 254 GWEERQDVLGRTYYVNHESRRTQWKRPS 281
GWEER+ GR +YVNH +R TQW+ P+
Sbjct: 86 GWEERRSASGRVHYVNHVTRTTQWETPN 3
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 407 LPPGWEEKQDDRGRSYYVDHNSKTTTWSKP 436
LP GWEE++ GR +YV+H ++TT W P
Sbjct: 95 LPEGWEERRSASGRVHYVNHVTRTTQWETP 6
>30322
Length = 531
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 856 NRLDLPPYESFDELWDKLQMAIENTQGF 883
NRLD+PPYE++++ KL A+E T GF
Sbjct: 2 NRLDIPPYETYEKFLSKLTCAVEETCGF 85
>31463
Length = 495
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 843 GTPDKLPRAHTCFNRLDLPPYESFDELWDKLQMAIENTQGFD 884
G D+LP A TC N L LP ++ L KL AIE+ GF+
Sbjct: 7 GQEDRLPTASTCMNLLKLPEFKDEKTLRTKLLYAIESGAGFE 132
>19350
Length = 428
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = -3
Query: 608 NPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLQKLITLHDMESVDSE 667
+P +G + L+ F+ +GR+ G+ + ++ F R K +L + I+ HD+ D
Sbjct: 222 SPRAGRNTPERLNAFRNVGRIMGLCLLQNEICPLFLNRHVLKYVLGRSISWHDLAFFDPV 43
Query: 668 YYSSLRWIL 676
Y SLR ++
Sbjct: 42 MYESLRGLV 16
>01494
Length = 2122
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +1
Query: 84 VIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL-PQ 142
I G K G + P+V + + + LNP WNE +F VL P+
Sbjct: 1174 TIVGARHLVKSGRGIASPFVEIEVTGXECDNQKFKTGTRVDNGLNPVWNENCVFDVLCPE 1353
Query: 143 RHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENP 177
+ F V DE+ +FLGQ +P+P P
Sbjct: 1354 MALLRFAVMDEDIFGDPNFLGQAX---FPVPCIRP 1449
>07591
Length = 796
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +2
Query: 90 LAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNE-EILFRVLP---QRHR 145
L KKD LG SDPY+ V +T+ +K +LNP W E+ + L +
Sbjct: 488 LDKKDFLGKSDPYLEVLRATSDGSWQMVHRTEVVKNNLNPSWRPFELSMQTLCGGNHQQN 667
Query: 146 ILFEVFDENRLTRDDFLG 163
I F+V+D + D++G
Sbjct: 668 IKFDVYDWDSDGSHDYIG 721
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +2
Query: 89 GLAKKDILGASDPYVRVTLYDPMSGILTSV-QTKTIKKSLNPKWNEE-ILFRVLPQRHRI 146
GL KD+L SDP LY +G +T+ +K L+P++ ++ + ++
Sbjct: 89 GLLNKDVLSKSDPC--AVLYLHRAGHYEEFGRTENVKNCLDPRFARSFVMDYYFEEVQKL 262
Query: 147 LFEVFDENR----LTRDDFLGQVDVPLYPLPTENPRME 180
+ V+D + L+ DDFLG+++ L + + +P ++
Sbjct: 263 MICVYDIDNTTPDLSDDDFLGKIETTLGQIVSNSPYIK 376
>13896
Length = 827
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 84 VIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQR 143
V+ L K G +D YV + L QT TI+ + NP+W EE +
Sbjct: 170 VLRARNLISKGKSGNNDVYVTIQLGKE------KYQTSTIRNAHNPEWFEECDLPIPHLH 331
Query: 144 HRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHP-RSHKSRVKGY 202
I V+ L+ DDFLG +PL+ E+ + + K+ P R ++ +G
Sbjct: 332 SEIEVSVYHXGVLS-DDFLGYTSLPLWEQRLEDTTKTQWISLKN---KPNRGLDNKYRGE 499
Query: 203 LRLKMTY 209
+ +K+T+
Sbjct: 500 IEVKVTF 520
>22144
Length = 634
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = -1
Query: 79 VVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFR 138
V +VKVI IGL K+D GA DPY ++ V TK ++P+W E +F
Sbjct: 397 VTQVKVIKAIGLQKQDAQGA-DPYCVISCEG------ERVTTKVEXNXVDPEWGEAAVFI 239
Query: 139 V 139
V
Sbjct: 238 V 236
>14539
Length = 436
Score = 35.4 bits (80), Expect = 0.095, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 123 IKKSLNPKWNEEILFRVL-PQRHRILFEVFDENRLTRDDFLGQVDVPLYPLP 173
+ LNP WN+ +F VL P+ + F V DE+ +FLGQ +P+P
Sbjct: 150 VDNGLNPVWNKNCVFDVLCPELALLRFAVMDEDTFGDPNFLGQ---GCFPVP 296
>25750
Length = 428
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 407 LPPGWEEKQDDRGRSYYVDHNSKTTTWSKPTMQDDPRSKIPAHLRGKTDSNDLGPLPPGW 466
LP G+E+++ +G+ Y++ + +TW P + PR LR + DLGP+ GW
Sbjct: 264 LPDGYEQRRTQQGQIYFLHTRTGVSTWHDPRV---PREASNLELRDE----DLGPMLHGW 422
Query: 467 E 467
E
Sbjct: 423 E 425
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 457 NDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRLQNVA 497
+D+ LP G+E+R G+++F++ + W DPR+ A
Sbjct: 249 HDMMELPDGYEQRRTQQGQIYFLHTRTGVSTWHDPRVPREA 371
>12851
Length = 1291
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +1
Query: 411 WEEKQDDRGRSYYVDHNSKTTTWSKPTMQDDPRSKIPAHLRGKTDSNDLGPLPPGWEERT 470
W E + GR+YY + +K ++W KP L+ T+ P W+E
Sbjct: 334 WGEFKAPDGRTYYYNSVTKKSSWEKPN-----------ELKSSTEXLSQCP----WKEYK 468
Query: 471 HTDGRVFFINHNIKKTQWEDPR 492
G+V++ N K++ W P+
Sbjct: 469 SDSGKVYYHNSQTKESCWTKPK 534
>00178
Length = 944
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -3
Query: 453 KTDSNDLGPLPPG---WEERTHTDGRVFFINHNIKKTQWEDPRL 493
K S+ L P PP W E +TDGR ++ N ++ WE P++
Sbjct: 180 KPPSSQLPPKPPEVLEWSEHKNTDGRSYYYNSRTMESTWEKPQV 49
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = -3
Query: 399 VLLPTSSGLPPG------WEEKQDDRGRSYYVDHNSKTTTWSKPTMQDDPRSKI 446
V P SS LPP W E ++ GRSYY + + +TW KP + D +K+
Sbjct: 186 VQKPPSSQLPPKPPEVLEWSEHKNTDGRSYYYNSRTMESTWEKPQVLIDWEAKV 25
>30040
Length = 652
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -3
Query: 98 ASDPYVRVTLYDPMSGILTSVQTKTIKK-SLNPKWNEEILFRVLPQRHRILFEVFDENRL 156
++DP+VRV+L + G + ++++ S+NP WNE + F V + +L +V E +
Sbjct: 557 SADPFVRVSLL--VEGKKVKRKKTSVRRASINPVWNEALAFNVPAE---VLPKVTLEVSV 393
Query: 157 TRDDFLGQVDV 167
D +G DV
Sbjct: 392 LDHDLIGHGDV 360
>28393
Length = 726
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 79 VVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPK 130
V +VKV+ +GL K+D+ GA DPY ++ V T+ ++NP+
Sbjct: 136 VTQVKVVKAVGLEKQDVQGA-DPYCVISCEGE------KVSTRVESNTVNPE 2
>01656
Length = 2498
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +2
Query: 466 WEER-THTDGRVFFINHNIKKTQWEDP 491
WE++ + + GR +++N + K++QWE+P
Sbjct: 2 WEQKVSRSTGRAYYLNIHTKESQWEEP 82
>06273
Length = 1677
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 618 HLSYFKFIGRVAGMAVYHGKLLDGFFIRPFY 648
HLSYF +G V G+ VY G + F +R +Y
Sbjct: 279 HLSYFPLVGXVXGVXVYLGGI---FAVRMWY 196
>18322
Length = 501
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = -1
Query: 124 KKSLNPKWNEEILFRVLPQRHRILFEVFDENRLTRDDFLGQV 165
+++L PKWNE + + + +VFD++ +++ DF+G+V
Sbjct: 390 EETLFPKWNELVTVEMKDDGSTLTIDVFDKDMISK-DFMGKV 268
>20379
Length = 1354
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 315 PDNRESPENWEIVREDENTEYSGQAVQSPPSGHIDVQTHLAEEFNTRLA 363
P +E+ E+ + +N E + VQS G I + TH AE+F LA
Sbjct: 530 PATQETVHQEELADDVDNIEQFNENVQSDEIGAISLSTHEAEDFGEALA 676
>25445
Length = 460
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 118 VQTKTIKKSLNPKWNEEILFRVL 140
+TKTIK SLNP+W+E L
Sbjct: 73 TETKTIKSSLNPQWDETFTLTCL 5
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|124339838|ref|NP_038586.2| heat shock 70kDa protein
1-like [Mus musculus]
(641 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30255 308 e-106
21024 236 2e-62
37715 140 4e-53
27378 201 1e-51
26390 177 7e-45
24750 135 4e-32
31218 91 1e-18
06909 77 2e-18
09881 89 7e-18
20979 85 9e-17
12271 63 4e-10
13684 55 7e-08
03996 52 7e-07
34036 49 2e-06
13300 46 6e-05
>30255
Length = 1761
Score = 308 bits (788), Expect(2) = e-106, Method: Compositional matrix adjust.
Identities = 152/199 (76%), Positives = 165/199 (82%)
Frame = -1
Query: 330 KAKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLNKSINPDEXXXXXXXXXXXILMGDKSEK 389
K IH+IVLVGGSTRIPK+QKLLQD+FNG++L KSINPDE IL GDKSE+
Sbjct: 1644 KPGIHEIVLVGGSTRIPKIQKLLQDFFNGKELCKSINPDEAVAYGACVQAAILHGDKSEE 1465
Query: 390 VQDXXXXXXXXXXXXXETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGER 449
VQD ETAGGVMT LIKRN+TIPTKQTQ FTTYSDNQPGVLIQVYEGER
Sbjct: 1464 VQDLLLLDVAPLSMGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGER 1285
Query: 450 AMTRDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDK 509
AMTRDNNLLG+F+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDK
Sbjct: 1284 AMTRDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAADKSTGKENKITITNDK 1105
Query: 510 GRLSKEEIERMVQEAERYK 528
GRLSKEEIERMV +AE+ +
Sbjct: 1104 GRLSKEEIERMVNDAEKSR 1048
Score = 96.7 bits (239), Expect(2) = e-106, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 57/79 (72%)
Frame = -3
Query: 537 KIAAKNALESYAFNMKSAVGDEGXXXXXXXXXXXXXXXXCNEVLSWLEANQLAEKDEFDH 596
+I++KN+LESYAF+MKS + DE CNEV+SWL+ANQ AEKDE+D
Sbjct: 1024 RISSKNSLESYAFHMKSTIEDEKIKDKIGEEDKKTIVDKCNEVISWLDANQTAEKDEYDD 845
Query: 597 KRKELENMCNPIITKLYQS 615
K+KELE +CNPIITKLYQ+
Sbjct: 844 KQKELEKVCNPIITKLYQA 788
>21024
Length = 3220
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/403 (38%), Positives = 224/403 (55%), Gaps = 17/403 (4%)
Frame = +1
Query: 168 GLNVLRIINEPTAAAIA--YGL-----DKGSHGER----HVLIFDLGGGTFDVSILTIDD 216
G NVLR+INEPTAAA+A +G D G R H+ + D G ++
Sbjct: 727 G*NVLRVINEPTAAALALWHGQV*R*SDSGV*FRRRDV*HLYLGDPEG--------SV*S 882
Query: 217 GIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 276
I + + G L + + RK K SQ + + R +++K L
Sbjct: 883 QINQRRHIPGRRGLLTTTWSTSWHQNL-----RKSKD*TSQRIQWLCRDYVRQQKSKIEL 1047
Query: 277 SSSTQANLEIDSLYEGID------FYTSITRARFEELCADLFRGTLEPVEKSLRDAKMDK 330
SSS Q ++ + Y +D ++R++FE L L + T+ P +K+L+DA++ K
Sbjct: 1048 SSSLQTDINLP--YLTMDASGPKHMNLKLSRSKFESLVESLVKRTVGPCQKALQDAEVKK 1221
Query: 331 AKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLNKSINPDEXXXXXXXXXXXILMGDKSEKV 390
+ I +++LVGG +R+PKVQ +QD F GR +KS+NPDE +L GD V
Sbjct: 1222 SDIGEVILVGGMSRMPKVQSTVQDLF-GRTPSKSVNPDEAVAIGAAIQGGVLAGD----V 1386
Query: 391 QDXXXXXXXXXXXXXETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERA 450
D ET GGV T LI RN+TIPTK++Q+F+T +D Q V I+V++GER
Sbjct: 1387 TDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVHQGERE 1566
Query: 451 MTRDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKG 510
M DN LLG+F L GIPPAPRGVPQ+EVTFDIDANGI+NV+A DK TGK +I I + G
Sbjct: 1567 MANDNKLLGQFTLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGG 1746
Query: 511 RLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKS 553
LSK+EIE M++ AE + +D ++E + N +S + +S
Sbjct: 1747 -LSKDEIENMIKNAEAHAEDDRRKKELVEVLNQADSIIHDTES 1872
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 158/269 (58%), Gaps = 2/269 (0%)
Frame = +3
Query: 5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 63
KG IGIDLGTT SCV + + + +++ N +G+RTTPS +AFT D ER+ G AK Q
Sbjct: 243 KGHVIGIDLGTTNSCVALMEGKQAKVLENSEGSRTTPSVIAFTKDGERISGMPAKRQAVT 422
Query: 64 NPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAGKPKVMVSYKGEKKAFYPEEISS 123
N +NT+ KRLIGR+F DP VQ DMK ++++ +A V +G K + P ++ +
Sbjct: 423 NAENTLSATKRLIGRRFEDPEVQKDMKNVSYKIV-KASNGDAWVEAQG--KMYSPSQVGA 593
Query: 124 MVLTKMKETAEAFLGHNVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 183
VL KMKETAE++LG V NAV+TVPAYFNDSQRQATKDAG I+GL + + +
Sbjct: 594 FVLMKMKETAESYLGSKVNNAVVTVPAYFNDSQRQATKDAGQISGLKCVACDQRTHSCSS 773
Query: 184 AYGLDKGSHGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGE-DFDNRLVSH 242
+ + + G +S + + + + T +TH E FDN +V+
Sbjct: 774 CFMAWTSLKIK**RCLI*AEGRLTSLSWRSRRECLKSNQPT--ETHSWEERTFDNYMVNF 947
Query: 243 FVEEFKRKHKKDISQNKRAVRRLRTACER 271
EFK++ DI+++ AV+RLR A E+
Sbjct: 948 LASEFKKEQGLDITKDPMAVQRLREAAEK 1034
>37715
Length = 468
Score = 140 bits (354), Expect(2) = 4e-53, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 78/96 (81%)
Frame = -2
Query: 94 FQVINEAGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHNVTNAVITVPAYFN 153
+VIN++ KP + G K F PEEIS+MVL KM++ AEA+LG + NAV+TVPAYFN
Sbjct: 458 LKVINKSNKPHIQALVSGATKTFAPEEISAMVLGKMRDIAEAYLGKKIDNAVVTVPAYFN 279
Query: 154 DSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDK 189
D+QRQATKDAG IAGLNV+RIINEPTAAAIAYGLDK
Sbjct: 278 DAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDK 171
Score = 86.3 bits (212), Expect(2) = 4e-53, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = -1
Query: 196 HVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEF 247
++L+FDLGGGTFDVS+LTID+G+FEV AT GDTHLGGEDFD R++ HF++ +
Sbjct: 156 NILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLY 1
>27378
Length = 410
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 107/124 (86%)
Frame = -1
Query: 246 EFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFE 305
EFKRK+KKD+ N RA+RRLRTA ERAKRTLSSST+A +E+D+L+EG DFYT I+RARFE
Sbjct: 410 EFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEVDALFEGHDFYTKISRARFE 231
Query: 306 ELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLNKSI 365
ELCADLFR TL PVEK+L DAKMDK IHDIVLVGGSTRIPKVQ LLQ +F G+ LN SI
Sbjct: 230 ELCADLFRQTLAPVEKALNDAKMDKQMIHDIVLVGGSTRIPKVQNLLQQFFGGKSLNLSI 51
Query: 366 NPDE 369
NPDE
Sbjct: 50 NPDE 39
>26390
Length = 665
Score = 177 bits (450), Expect(2) = 7e-45, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 108/152 (71%)
Frame = +2
Query: 406 ETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFDLTG 465
ET GGVMT LI R +TIP ++ ++F+T DNQ V IQVYEGER+ T+DN+LLGRFDLTG
Sbjct: 56 ETVGGVMTTLIARGTTIPARKAKVFSTAQDNQDSVTIQVYEGERSRTKDNHLLGRFDLTG 235
Query: 466 IPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKEEIERMVQEAE 525
IP APRGVPQIEVTF +DANG++ V+A DK TG+ N I I LS E++ERMVQEA+
Sbjct: 236 IPAAPRGVPQIEVTFQVDANGVMQVSAEDKGTGQKNDIIIQQSGSGLSPEDVERMVQEAQ 415
Query: 526 RYKAEDEGQREKIAAKNALESYAFNMKSAVGD 557
+ ED RE ++ LES A+ + + D
Sbjct: 416 DFAEEDRKFRELTESRTGLESLAYTAQHQLQD 511
Score = 21.9 bits (45), Expect(2) = 7e-45, Method: Compositional matrix adjust.
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +3
Query: 580 LSWLEANQLAEKDEFDHKRKELE 602
+ WLEA+ A +E D ++ +L+
Sbjct: 597 IQWLEAHPSASVEEVDERKSQLQ 665
>24750
Length = 552
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +1
Query: 441 LIQVYEGERAMTRDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKA 500
++QVYEGERAMTRDNNLLG+F+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK
Sbjct: 154 MLQVYEGERAMTRDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAADKSTGKE 333
Query: 501 NKITITNDKGR 511
NKITITNDKG+
Sbjct: 334 NKITITNDKGQ 366
>31218
Length = 322
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 67/100 (67%)
Frame = +2
Query: 227 DTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEI 286
DTHLGGEDFD RLV + V+ K+K +D+ + RA+ RLR + E+AKR LSS +++
Sbjct: 2 DTHLGGEDFDQRLVDYLVKLIKQKTGRDVRHDTRAMSRLRRSAEKAKRALSSQHSTKVDL 181
Query: 287 DSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKSLRDA 326
D + + T +TRA+FEEL DLFR TL V+++L D+
Sbjct: 182 DGVTSDLADLT-LTRAKFEELNTDLFRSTLTTVKRALEDS 298
>06909
Length = 456
Score = 77.4 bits (189), Expect(2) = 2e-18, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = -3
Query: 549 FNMKSAVGDEGXXXXXXXXXXXXXXXXCNEVLSWLEANQLAEKDEFDHKRKELENMCNPI 608
+MKS + DE C+EV++WL+ANQLAEKDE+D K+KE+E +CNPI
Sbjct: 388 LHMKSTIEDEKIKDKISTEDKKTILDKCDEVIAWLDANQLAEKDEYDDKQKEIEKVCNPI 209
Query: 609 ITKLYQS 615
ITKLYQ+
Sbjct: 208 ITKLYQA 188
Score = 33.9 bits (76), Expect(2) = 2e-18, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -1
Query: 526 RYKAEDEGQREKIAAKNALESYA 548
+YK +DE Q+ +I+AKN+LESYA
Sbjct: 456 KYKEDDEKQKSRISAKNSLESYA 388
>09881
Length = 600
Score = 88.6 bits (218), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 64/106 (60%)
Frame = +3
Query: 5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 64
K A G+ LGT +C+ V++ GK + AND G+R+TP VAFT + +G +AK + N
Sbjct: 177 KMAAYGVHLGTCSACLAVYKDGKTSVAANDAGDRSTPCVVAFTACDAEVGASAKQGIVSN 356
Query: 65 PQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAGKPKVMVSYK 110
+NTV + KR++G F DPV Q + P +V+N+ +P V +K
Sbjct: 357 VKNTVCNVKRILGLTFEDPVTQEYLASSPVKVVNQKNQPMFEVEFK 494
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +2
Query: 138 GHNVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 187
G + +AV+ VP+ F+D QR A A AG VLR+INE +AAA+AY L
Sbjct: 2 GKGIQDAVLAVPSDFSDKQRAAASAAASKAGFKVLRLINECSAAALAYDL 151
>20979
Length = 976
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Frame = +1
Query: 232 GEDFDNRLVSHFVEEFKRKHKKD--ISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSL 289
G + RL H + F + K+ + N RA+ +L ER K+ LS+++ +++ L
Sbjct: 70 GVEMTLRLRDHLAKVFNGQKKRSFKLEDNPRAMAKLLKEAERVKKVLSANSDHKAQVEGL 249
Query: 290 YEGIDFYTSITRARFEELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQ 349
EG DF ++R + EL DL +P+E +L+ +++ +I +I+L+GG +R+P+VQ
Sbjct: 250 VEGEDFAAKVSREDYLELIKDLLARVTKPMEDALKVSEITMPEITEIILMGGGSRVPRVQ 429
Query: 350 KLLQDYFNGRDLNKSINPDE 369
+ L + DL KSIN DE
Sbjct: 430 EELLKFSGKSDLGKSINTDE 489
>12271
Length = 1762
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Frame = +2
Query: 294 DFYTSITRARFEELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQKLLQ 353
DF +TR ++ L DL PV++ L +++ A+I +I+L+GG +R+PK+ ++L
Sbjct: 41 DFSCKVTRDKYLHLIQDLLDRVTLPVQQVLTASQITWAEITEIILMGGGSRLPKIHEILL 220
Query: 354 DYFNGRDLNKSINPDE 369
DY ++L KS+N DE
Sbjct: 221 DYSGKKELGKSLNTDE 268
>13684
Length = 438
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = -3
Query: 5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 64
K A G+ LGT +C+ V++ GK + AND G+R+TP VAFT + +G +AK + N
Sbjct: 181 KMAAYGVHLGTCSACLAVYKDGKTSVAANDAGDRSTPCVVAFTACDAEVGASAKQGIVSN 2
>03996
Length = 1105
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = -2
Query: 306 ELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLNKSI 365
EL DL +P+E +L+ +++ +I +I+L+GG +R+P+VQ+ L + DL KSI
Sbjct: 1056 ELIKDLLARVTKPMEDALKVSEITMPEITEIILMGGGSRVPRVQEELLKFSGKSDLGKSI 877
Query: 366 NPDE 369
N DE
Sbjct: 876 NTDE 865
>34036
Length = 363
Score = 48.5 bits (114), Expect(2) = 2e-06, Method: Composition-based stats.
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +2
Query: 590 EKDEFDHKRKELENMCNPIITKLYQS 615
EKDE+D K+KE+E +CNPIITKLYQ+
Sbjct: 2 EKDEYDDKQKEIEKVCNPIITKLYQA 79
Score = 21.6 bits (44), Expect(2) = 2e-06, Method: Composition-based stats.
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 631 AATGPTIEEVD 641
+ GPTIEEVD
Sbjct: 145 GSAGPTIEEVD 177
>13300
Length = 453
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Frame = +3
Query: 156 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKGSH---GERHVLIFDLGGGT-----F 207
+R+A A G+NVL+++ + A A+ YG+ + + ++ + +D+G +
Sbjct: 3 ERRAIMTAADXVGINVLQLMTDSAAVALNYGVFRRKNFNTTAQYYMFYDMGATSTVATVV 182
Query: 208 DVSILTIDDGI-------FEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKD--ISQN 258
++ + +G +K D LGG + RL H + F + K+ + N
Sbjct: 183 SYQVVKVKEGTRVESNPQLTIKGVGFDRTLGGLEMTLRLRDHLAKVFNGQKKRSFKLEDN 362
Query: 259 KRAVRRLRTACERAKRTLSSSTQANLEID 287
RA+ +L ER K+ LS+++ +++
Sbjct: 363 PRAMAKLLKEAERVKKVLSANSDHKAQVE 449
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|157041260|ref|NP_038539.2| erythrocyte protein band
4.1-like 2 [Mus musculus]
(988 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00990 384 e-106
11374 180 2e-45
18811 174 1e-43
17332 129 6e-30
13951 60 8e-19
28244 80 4e-15
08363 53 6e-07
05888 47 3e-05
03469 47 4e-05
17284 30 4.0
>00990
Length = 3161
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 238/328 (72%), Gaps = 5/328 (1%)
Frame = +3
Query: 219 DGTEYSCDLEKRAKGQVLFDRVCEHLNLLEKDYFGLLFQDH---PEQKNWLDPAKEIKRQ 275
DG + +L++ A+G+ LFD+VC+HL+L+EKDYFGL F D K WL P K I +Q
Sbjct: 282 DGEHVNFELDRNAEGRELFDKVCQHLDLIEKDYFGLQFVDERISNHLKCWLSPDKRISKQ 461
Query: 276 LKNLPWLFTFNVKFYPPDPSQLTEDITRYFLCLQLRQDIASGRLPCSFVTHALLGSYTLQ 335
K PWLF F +KFYPPDP+QL E +TR+ + LQ R+DI SG+LP +++T A+LGSY +Q
Sbjct: 462 KKGGPWLFDFALKFYPPDPTQLRESLTRWLVVLQTRRDILSGKLPATYLTQAMLGSYCVQ 641
Query: 336 AEHGDYDPEEYDSID-LGDFQFAPAHTKELEEKVSELHKTHRGLSPAQADSQFLENAKRL 394
A+ GDYDP E+ ++ + D FAP T +L EK+ ELH+ H+G +P +A++ FLENAK+L
Sbjct: 642 ADVGDYDPNEHRGVEYIRDTPFAPNQTIDLLEKIVELHRQHKGQTPDEAETNFLENAKKL 821
Query: 395 SMYGVDLHHAKDSEGVDIKLGVCANGLLIYKDRLRINRFAWPKILKISYKRSNFYIKVRP 454
+MYGVDLH A+D VDI LGVCA+GL +Y+++LRI+RF WPKILKISYKR FYIKVRP
Sbjct: 822 AMYGVDLHAAQDVNNVDIMLGVCASGLQVYREKLRISRFVWPKILKISYKRRQFYIKVRP 1001
Query: 455 AELEQFESTIGFKLPNHRAAKRLWKVCVEHHTFYRLVSPEQPPKTK-FLTLGSKFRYSGR 513
++ E++ FKL HR AKRLWK+CVEHH F+RL EQ F LGSKFRYSGR
Sbjct: 1002SDNSAMENSFCFKLATHRLAKRLWKICVEHHAFFRLREAEQSQNAAMFPRLGSKFRYSGR 1181
Query: 514 TQAQTREASTLIDRPAPQFERASSKRVS 541
T QTR++S ++DRP P FER+ R S
Sbjct: 1182TLYQTRQSSQILDRPNPYFERSQPARSS 1265
>11374
Length = 800
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 100/140 (71%), Gaps = 1/140 (0%)
Frame = +3
Query: 401 LHHAKDSEGVDIKLGVCANGLLIYKDRLRINRFAWPKILKISYKRSNFYIKVRPAELEQF 460
LH A+D VDI LGVCA+GL +Y+++LRI+RF WPKILKISYKR FYIKVRP++
Sbjct: 3 LHAAQDVNNVDIMLGVCASGLQVYREKLRISRFVWPKILKISYKRRQFYIKVRPSDNSAM 182
Query: 461 ESTIGFKLPNHRAAKRLWKVCVEHHTFYRLVSPEQPPKTK-FLTLGSKFRYSGRTQAQTR 519
E++ FKL HR AKRLWK+CVEHH F+RL EQ F LGSKFRYSGRT QTR
Sbjct: 183 ENSFCFKLATHRLAKRLWKICVEHHAFFRLREAEQSQNAAMFPRLGSKFRYSGRTLYQTR 362
Query: 520 EASTLIDRPAPQFERASSKR 539
+S +DRP P FER+ R
Sbjct: 363 HSSQTLDRPDPYFERSQPAR 422
>18811
Length = 478
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 101/129 (78%)
Frame = -2
Query: 351 LGDFQFAPAHTKELEEKVSELHKTHRGLSPAQADSQFLENAKRLSMYGVDLHHAKDSEGV 410
+ D FAP EL EK+ ELH+ H+G +P +A+ +LENAK+LSMYGVDLH A+D V
Sbjct: 387 IKDIPFAPNQAPELLEKIVELHRQHKGQTPDEAEVNYLENAKKLSMYGVDLHAAQDVNNV 208
Query: 411 DIKLGVCANGLLIYKDRLRINRFAWPKILKISYKRSNFYIKVRPAELEQFESTIGFKLPN 470
DI LGVC++GL +Y+D+LRI+RF WPKI+KISYKR +FY+KVRPA+ + E+++ F+LP
Sbjct: 207 DIMLGVCSSGLQVYRDKLRISRFVWPKIIKISYKRKHFYVKVRPADNKGLETSVSFRLPT 28
Query: 471 HRAAKRLWK 479
HR AKRLWK
Sbjct: 27 HRLAKRLWK 1
>17332
Length = 473
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 97/157 (61%), Gaps = 2/157 (1%)
Frame = +2
Query: 219 DGTEYSCDLEKRAKGQVLFDRVCEHLNLLEKDYFGLLFQDHPEQKNWLDPAKEIKRQLKN 278
D +++ ++ KG +L ++VCE LNL EKDYFGL F D Q +WLD K + QLK
Sbjct: 2 DDSDHQLQVKGNWKGILLQEKVCELLNLHEKDYFGLRFIDASGQTHWLDGNKSLSSQLKG 181
Query: 279 L--PWLFTFNVKFYPPDPSQLTEDITRYFLCLQLRQDIASGRLPCSFVTHALLGSYTLQA 336
P F VKFY DP +L E+ITRY LQ++QDI GRLP +F + L +Y +Q+
Sbjct: 182 CQTPHKLYFGVKFYAADPCKLREEITRYLFFLQVKQDILQGRLPVTFDEASELCAYAVQS 361
Query: 337 EHGDYDPEEYDSIDLGDFQFAPAHTKELEEKVSELHK 373
E GD+DP ++ + +F F P T+ELE +V+ LH+
Sbjct: 362 ELGDFDPRQHTDGYVSEFCFIPNQTEELERRVAGLHR 472
>13951
Length = 720
Score = 59.7 bits (143), Expect(2) = 8e-19, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = -2
Query: 219 DGTEYSCDLEKRAKGQVLFDRVCEHLNLLEKDYFGLLFQDH---PEQKNWLDPAKEIKR 274
DG + +L++ A+G+ LFD+VC+HL+L+EKDYFGL F D K WL P K I +
Sbjct: 368 DGEHVNFELDRNAEGRELFDKVCQHLDLIEKDYFGLQFVDERISNHLKCWLSPDKRISK 192
Score = 53.1 bits (126), Expect(2) = 8e-19, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = -1
Query: 270 KEIKRQLKNLPWLFTFNVKFYPPDPSQLTEDITRYFLCLQL 310
K+ + + K PWLF F +KFYPPDP+QL E +TR+ + L +
Sbjct: 204 KDFQNRKKGGPWLFDFALKFYPPDPTQLRESLTRWLVVLHV 82
>28244
Length = 422
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Frame = -1
Query: 422 LIYKDRLRINRFAWPKILKISYKRSNF-YIKVRPAELEQFESTIG-FKLPNHRAAKRLWK 479
L+++ +I F WPK+ ++ +K + V E Q + I F+L + +A K LWK
Sbjct: 422 LVFEGNXKIGLFFWPKMTRLDFKGKKLTLVAVEDDENGQSQDHIFVFRLQSEKACKHLWK 243
Query: 480 VCVEHHTFYRLVSPEQPPKTK--FLTLGSKFRYSGRTQAQTREASTLIDRPAPQFERASS 537
VEHH F+RL P Q P + F +GS+FRYSGRT+ QT + R + +FER S
Sbjct: 242 CAVEHHAFFRLKGPVQGPNARQNFFRMGSRFRYSGRTEYQTSTMNRA--RRSVKFERKPS 69
Query: 538 KRVS 541
+R S
Sbjct: 68 QRYS 57
>08363
Length = 1878
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Frame = +1
Query: 852 EPPVVKTEMVTISDASQRTEISTKEVPIVQTETKTITYESPQIDGGAGGDSGVLLXXXXX 911
+PP V TE V + + TK VP+V+TET+T+TYE G+ GVL+
Sbjct: 112 DPPTVATESVHYQPDVEEVPVPTKNVPLVKTETRTVTYEREGF--PFDGEDGVLVSASSH 285
Query: 912 XXXXXXXXXXXXXXXXVKGGISETRIEKRIVITGXXXX-XXXXXXXXXIREAREQHPDMS 970
K G+ ETR+E R+V++ IR E +PDMS
Sbjct: 286 STRMQTIETTTYKTE--KDGVQETRVEHRVVLSSTDDDFDYDAALADAIRSVTEFNPDMS 459
Query: 971 VTRV 974
V R+
Sbjct: 460 VERI 471
>05888
Length = 490
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2
Query: 504 LGSKFRYSGRTQAQTREASTLIDRPAPQFERASSKR 539
LGSKFRYSGRT Q R +S +DRP P FER+ R
Sbjct: 489 LGSKFRYSGRTLYQARHSSQTLDRPDPYFERSQPAR 382
>03469
Length = 1275
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = -3
Query: 872 ISTKEVPIVQTETKTITYESPQIDGGAGGDSGVLLXXXXXXXXXXXXXXXXXXXXXVKGG 931
+ TK VP+V+TET+T+TYE G+ GVL+ K G
Sbjct: 1258 VPTKNVPLVKTETRTVTYEREGF--PFDGEDGVLVSASSHSTRMQTIETTTYKTE--KDG 1091
Query: 932 ISETRIEKRIVITGXXXX-XXXXXXXXXIREAREQHPDMSVTRV 974
+ ETR+E R+V++ IR E +PDMSV R+
Sbjct: 1090 VQETRVEHRVVLSSTDDDFDYDAALADAIRSVTEFNPDMSVERI 959
>17284
Length = 489
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 414 LGVCANGLLIYKDRLRINRFAWPKILKIS 442
L VC N ++ K L+I++ WPK+L +S
Sbjct: 75 LNVCLNSCVL*K*ILKIDKLRWPKVLTVS 161
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|176866245|ref|NP_291030.2| solute carrier family 4,
sodium bicarbonate cotransporter-like, member 10 [Mus musculus]
(1088 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14939 211 e-106
17976 184 3e-54
18083 132 9e-31
00560 33 0.75
36201 31 2.2
>14939
Length = 1186
Score = 211 bits (538), Expect(2) = e-106, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 151/218 (69%), Gaps = 8/218 (3%)
Frame = -3
Query: 866 APGEQPKFLGIREQRVTGLMIFILMGSSVFMTSILKFIPMPVLYGVFLYMGASSLKGIQL 925
PGEQPKFLG+REQRVTG+ IF+L+G SV +TS+LKFIPMPVLYGVFLYMG SSL+G+QL
Sbjct: 683 CPGEQPKFLGVREQRVTGITIFLLIGISVMLTSVLKFIPMPVLYGVFLYMGVSSLRGMQL 504
Query: 926 FDRIKLFWMPAKHQPDFIYLRHVPLRKVHLFTVIQMSCLGLLWIIK-VSRAAIVFPMMVL 984
R+ +++MPAK+Q D ++LRHV +VHLFT+IQ+ CL LW IK + +I FP+MVL
Sbjct: 503 VHRVLIWFMPAKYQWDLMFLRHVRTNRVHLFTIIQIFCLLCLWGIKSYKKISIAFPIMVL 324
Query: 985 ALVFVRKLMDFLFTKRELSWLDDLMPXXXXXXXXXXXXXXXQSMLAMEDEGTVQLPLE-G 1043
A+ FVRK +D++F +REL WLDD+MP + ++ EG+ +PL G
Sbjct: 323 AMCFVRKALDWVFDQRELKWLDDIMPEAHKRAKEDEIKKQEEQRFSL-IEGSTSIPLAMG 147
Query: 1044 HYRDDPSV------INISDEMSKTAMWGNLLVTADNSK 1075
+ ++ +NIS+EMS+TA+W +++ +S
Sbjct: 146 LNMEHITIQAEMDQVNISEEMSRTALWKSIMHNESSSN 33
Score = 193 bits (490), Expect(2) = e-106, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 107/150 (71%)
Frame = -1
Query: 722 FPTKVRSIVSDFAVFLTILCMVLIDYAIGIPSPKLQVPSVFKPTRDDRGWFVTPLGPNPW 781
FPT VR+ +SDF+V + IL MV+ D +G+P+PKL VP F PT RGW + P+G NPW
Sbjct: 1114 FPTMVRATLSDFSVLIAILSMVVFDICVGLPTPKLHVPETFAPTNPKRGWLINPVGENPW 935
Query: 782 WTXXXXXXXXXXXXXXXFMDQQITAVIINRKEHKLKKGCGYHLDLLMVAVMLGVCSIMGL 841
WT FMDQQITAVI+NRKE+KL KG GYHLDL +V+V++ +CS +GL
Sbjct: 934 WTTLAAVIPALLAVILIFMDQQITAVIVNRKENKLVKGRGYHLDLFIVSVLIILCSFLGL 755
Query: 842 PWFVAATVLSITHVNSLKLESECSAPGEQP 871
PWFVAATVLSI HVNSLK ES+CSAP P
Sbjct: 754 PWFVAATVLSINHVNSLKKESQCSAPANNP 665
>17976
Length = 781
Score = 184 bits (466), Expect(2) = 3e-54, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 109/137 (79%), Gaps = 1/137 (0%)
Frame = +1
Query: 875 GIREQRVTGLMIFILMGSSVFMTSILKFIPMPVLYGVFLYMGASSLKGIQLFDRIKLFWM 934
G+REQR+TGLM+ +L G +V T++LKFIPM VLYGVFLYMG ++LKG+Q DRI L
Sbjct: 139 GVREQRLTGLMVGLLSGLTVLFTAVLKFIPMAVLYGVFLYMGMAALKGMQFIDRILLMLK 318
Query: 935 PAKHQPDFIYLRHVPLRKVHLFTVIQMSCLGLLWIIK-VSRAAIVFPMMVLALVFVRKLM 993
PAK+QPD YLRHVP+++VH+FT IQ+ CL +LW+IK V +I+FP+MVL FVRK +
Sbjct: 319 PAKYQPDTTYLRHVPIKRVHIFTAIQVVCLAVLWVIKSVKSVSIIFPIMVLGTCFVRKGL 498
Query: 994 DFLFTKRELSWLDDLMP 1010
D+LFT+ EL WLDD+MP
Sbjct: 499 DYLFTQGELKWLDDIMP 549
Score = 47.4 bits (111), Expect(2) = 3e-54, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +3
Query: 840 GLP-WFVAATVLSITHVNSLKLESECSAPGEQPKFLG 875
GLP VAATV ++ H+ SLK ESEC+APGE+P FLG
Sbjct: 30 GLPLGTVAATVSALAHIMSLKKESECTAPGERPTFLG 140
>18083
Length = 865
Score = 132 bits (332), Expect = 9e-31, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 120/199 (60%), Gaps = 4/199 (2%)
Frame = -3
Query: 799 FMDQQITAVIINRKEHKLKKGCGYHLDLLMVAVMLGVCSIMGLPWFVAATVLSITHVNSL 858
FMDQ I+A ++N ++K+KKG YH DLL++AV+ V S+ P AA S HV +L
Sbjct: 854 FMDQNISAALVNAPQNKMKKGTAYHWDLLVIAVVNAVISVFAFPMVHAALPHSPLHVRAL 675
Query: 859 KLESECSAPGEQPK-FLGIREQRVTGLMIFILMGSSVFMTSILKFIPMPVLYGVFLYMGA 917
E G + + +RE R+T ++ IL+G S+ + +L +IP PVLYG+FLY+
Sbjct: 674 ADVEERVVQGHITQTVVRVRETRITAILSHILIGLSILIMFVLAYIPTPVLYGLFLYVAI 495
Query: 918 SSLKGIQLFDRIKLFWMPAKHQPDFIYLRHVPLRKVHLFTVIQMSCLGLLWI---IKVSR 974
++L Q+F+RI LF+ P Y+RHVP RKVH+FT+IQ+ L +L + + +
Sbjct: 494 TALYDNQMFERITLFFTEQSAYPPTHYIRHVPQRKVHIFTLIQLLQLVVLCVFGFVSFAY 315
Query: 975 AAIVFPMMVLALVFVRKLM 993
+ FP+++ L+ +R ++
Sbjct: 314 LKMFFPVLIFLLIPIRHMV 258
>00560
Length = 886
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 3/115 (2%)
Frame = +3
Query: 877 REQRVTGLMIFILMGSSVFMTSILKFIPMPVLYGVFLYMGASSLKGIQLFDRIKLFWMPA 936
++QR+ G ILMG+ F + L ++PM +L M +L + + W P
Sbjct: 216 KKQRIVGFFTCILMGTFCFSVASL-YLPMLLLKARKFAM-LYTLGSLFVISSFAFLWGPY 389
Query: 937 KHQPDFIYLRHVPLRKVH---LFTVIQMSCLGLLWIIKVSRAAIVFPMMVLALVF 988
H + +P V+ +F I S +WI I ++ALV+
Sbjct: 390 NHLKHLFSMSRLPFTIVYFGTMFATIYFS----MWIHSTVLTVICALGQIIALVW 542
>36201
Length = 571
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 457 ILDIKRKAPFFWSDFRDAFSLQCLASFLFLYCACMSPVITFGGL-LGEATEGRISAIESL 515
IL +KR P +F F ++C +F+ A + + F L LG A++GR+ +E L
Sbjct: 171 ILSLKR*RPA*GENF---FPVKCSVNFII---AMAAXTVXFSPLCLGXASKGRVGGLEML 332
Query: 516 FGASMTGIAYSLFGGQPLTILGSTGPV 542
A G+A + G T PV
Sbjct: 333 VDADXPGVA---------QLAGDTAPV 386
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|225690606|ref|NP_778190.3| calcium-transporting
ATPase 2C1 [Mus musculus]
(918 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06342 382 e-106
00499 239 5e-63
36566 211 8e-55
26683 127 2e-29
30333 113 3e-25
12151 87 1e-22
28890 83 6e-16
29829 81 2e-15
14773 75 2e-13
08160 71 2e-12
04985 64 3e-10
14321 55 1e-07
13525 40 0.004
07486 39 0.009
21541 38 0.020
17925 37 0.044
33697 36 0.057
>06342
Length = 2428
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 253/691 (36%), Positives = 365/691 (52%), Gaps = 74/691 (10%)
Frame = +2
Query: 155 LVPGDTVCLSVGDRVPADLRLFE--AVDLSVDESSLTGETAPCSKVTAPQPAANGDLASR 212
LVPGD V +SVGD+VPAD+R+ + + L +D++ LTGE+ K T P P +
Sbjct: 5 LVPGDIVEVSVGDKVPADIRILKIHSTTLRIDQAILTGESVSVMKHTDPIPDPRAVNQDK 184
Query: 213 SNIAFMGTLVRCGKAKGIVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFYS 272
N+ F GT V GK KG+VIGTG +E G++ M E KTPLQ+ +D QLS
Sbjct: 185 KNLLFSGTNVAAGKCKGLVIGTGLTTEIGKIRNEMMDTEQEKTPLQQKLDEFSNQLS--- 355
Query: 273 FGIIGIIMLVGWLLG--------------KDILEMFTISVSLAVAAIPEGLPIVVTVTLA 318
+I II + W + K + F I+V+LAVAAIPEGLP V+T LA
Sbjct: 356 -KVITIICIAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLA 532
Query: 319 LGVMRMVKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHILTSDGLHA------ 372
LG RM KK AIV+ LP VETLGC +VICSDKTGTLT N+M+V + +
Sbjct: 533 LGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKLFIFSQIDTNQIKTT 712
Query: 373 --EVTGVGYNQFGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNNTL------MGKP 424
EVTG Y GE+ +G V P + + +CND+ + N +G+
Sbjct: 713 QFEVTGSTYAPDGELYQNGKKVKASDYPGLEELCTICGMCNDSSVDYNEAKTQYEKVGEA 892
Query: 425 TEGALIALAMKMGLDGLQQDYIRKAE------------------YPFSSEQKWMAVKCVH 466
TE AL LA K+ + + K E FS ++K M+V CV
Sbjct: 893 TETALTVLAEKLNFYNTDKSSLNKREMGTVCNHVIQDMWRKEFTLEFSRDRKSMSVFCVP 1072
Query: 467 RTQQDRP--EICFMKGAYEQVIKYCTTYNSKGQTLALTQQQRDLYQQEKARMGSA--GLR 522
P F KGA E ++ CT + ++ ++ + G+ LR
Sbjct: 1073NKPTRVPGGARMFAKGAPEGLLDRCTHVRIGNNKVPMSPAIKNEIMKLTKIYGTGRDTLR 1252
Query: 523 VLALAS--GPELGQ----------------LTFLGLVGIIDPPRTGVKEAVTTLIASGVS 564
LALA+ P + +TF+G+VG++DPPR V ++ A+G+
Sbjct: 1253CLALATIDNPPRREDMDLEDSRKFIEYETNMTFVGVVGMLDPPREEVMASIKNCRAAGIR 1432
Query: 565 IKMITGDSQETAIAIASRLGLYSKTSQS----VSGEEVDTMEVQHLSQIVPKVAVFYRAS 620
+ +ITGD++ TA AI R+G++S++ + +G E D + + V + +F R
Sbjct: 1433VIVITGDNKATAEAICRRIGVFSESENTEGLAYTGREFDELPPEDQRAAVMRARLFARVE 1612
Query: 621 PRHKMKIIKSLQKNGAVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDD 680
P HK KI++ LQ G + AMTGDGVNDA ALK A+IG+AMG +GT V K A++M+L DD+
Sbjct: 1613PAHKSKIVEYLQAEGEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDN 1789
Query: 681 FQTIMSAIEEGKGIYNNIKNFVRFQXXXXXXXXXXXXXXXXMNFPNPLNAMQILWINIIM 740
F TI++A+EEG+ IYNN+K F+R+ + P L +Q+LW+N++
Sbjct: 1790FSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGIPEALIPVQLLWVNLVT 1969
Query: 741 DGPPAQSLGVEPVDKDVIRKPPRNWKDSILT 771
DG PA +LG P D D+++KPPRN ++ ++T
Sbjct: 1970DGFPATALGFNPPDLDIMQKPPRNPREGLIT 2062
>00499
Length = 4026
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 253/524 (48%), Gaps = 67/524 (12%)
Frame = +2
Query: 308 GLPIVVTVTLALGVMRMVKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHILTS 367
GL VTV L L RM +K +VK L VETLG + ICSDKTGTLT+N MTV H+
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMW-- 175
Query: 368 DGLHAEVTGVGYNQFGEVIVDGDVVHGFYNPAVSR-------IVEAGCVCNDAVIRNNT- 419
F IV+ D N SR + +CN A + N
Sbjct: 176 --------------FDGRIVEADTSDDQSNATYSRSDPTWMALSRVAMLCNRAEFKGNQD 313
Query: 420 --------LMGKPTEGALIALAMKMGLDGLQQDYIRK----AEYPFSSEQKWMAVKCVHR 467
G +E AL+ +++ + G +Y R+ E PF+S K+ +H
Sbjct: 314 NVPILKRECNGDASESALLK-CVELSI-GHVTEYRRRNEKIVEIPFNSSNKYQV--SIHE 481
Query: 468 TQQ-DRPE-ICFMKGAYEQVIKYCTTYNSKGQTLALTQQQRDLYQQEKARMGSAGLRVLA 525
T+ D P + MKGA E+++ C+T G+ L R+ + +G G RVL
Sbjct: 482 TEDPDDPRYLLVMKGAPERIMDRCSTILLNGKEQPLDDNFREAFNAAYLELGGLGERVLG 661
Query: 526 LAS-----------------GPE--LGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIK 566
GP + L F+GL+ +IDPPR V +AV ++G+ +
Sbjct: 662 FCDYFLPVDQFPPGYEFDPEGPNFPITGLRFVGLMAMIDPPRAAVPDAVGKCRSAGIKVI 841
Query: 567 MITGDSQETAIAIASRLGLYSKTSQSVSG---------EEVDTMEVQ-------HLSQIV 610
M+TGD TA AIA +G+ S+ S++V EEVD E + L +
Sbjct: 842 MVTGDHPITAKAIARGVGIISEGSKTVEDIASERGIPVEEVDPREAKAAVIHGGDLRDMT 1021
Query: 611 P----------KVAVFYRASPRHKMKIIKSLQKNGAVVAMTGDGVNDAVALKAADIGVAM 660
P VF R SP+ K+ I++ Q+ G +VA+TGDGVND+ ALK ADIGVAM
Sbjct: 1022PAQIDEILRNHSEIVFARTSPQQKLIIVEGCQRQGQIVAVTGDGVNDSPALKKADIGVAM 1201
Query: 661 GQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQXXXXXXXXXXXXXXX 720
G G+DV K+AADMIL+DD+F +I++ +EEG+ I++N+K + +
Sbjct: 1202GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLLFI 1381
Query: 721 XMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRN 764
+ P PL + IL I++ D PA SL E + D++++ PR+
Sbjct: 1382LADIPLPLGTITILCIDLGTDMVPAISLAYEKAENDIMKRQPRD 1513
>36566
Length = 589
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 118/162 (72%)
Frame = +3
Query: 629 KSLQKNGAVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAI 688
+ LQ+NG VV MTGDGVNDAVALK+A+IG++MG +GTDV KEA+DMILVDDDF TI++AI
Sbjct: 102 RRLQQNGLVVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDDFTTILNAI 281
Query: 689 EEGKGIYNNIKNFVRFQXXXXXXXXXXXXXXXXMNFPNPLNAMQILWINIIMDGPPAQSL 748
EEGKGI+ NI+NFVRFQ + PNPLNAMQILWINIIMDGPPAQSL
Sbjct: 282 EEGKGIFYNIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIMDGPPAQSL 461
Query: 749 GVEPVDKDVIRKPPRNWKDSILTKNXXXXXXXXXXXXXCGTL 790
GVEPVD DVI++PPR+ D I+T+ GTL
Sbjct: 462 GVEPVDHDVIKQPPRHVGDPIITRRLIINVLSSALIIVSGTL 587
>26683
Length = 397
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 71/101 (70%)
Frame = +2
Query: 803 TPRDTTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPP 862
T RDTTMTFTCFVFFDMFNALS RSQTKSVF IGL +N+MF AV SI+GQ+LV+YFPP
Sbjct: 5 TKRDTTMTFTCFVFFDMFNALSCRSQTKSVFTIGLTTNRMFLLAVAFSIIGQMLVVYFPP 184
Query: 863 LQKVFQTEXXXXXXXXXXXXXXXXVCIVSEIIKKVERSREK 903
LQ VFQTE V +VSEI K ERS E+
Sbjct: 185 LQMVFQTEALTAYDILFLVTLTSSVLVVSEIKKWFERSLER 307
>30333
Length = 386
Score = 113 bits (283), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/95 (60%), Positives = 64/95 (67%)
Frame = +2
Query: 809 MTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQ 868
MTFTCFVFFDMFNAL SRSQ KSV +IGL SNK+F AV GS++GQLLVIYFPPLQ +FQ
Sbjct: 2 MTFTCFVFFDMFNALGSRSQAKSVLQIGLLSNKVFVLAVGGSLVGQLLVIYFPPLQAIFQ 181
Query: 869 TEXXXXXXXXXXXXXXXXVCIVSEIIKKVERSREK 903
TE V I SEI K R+ E+
Sbjct: 182 TEALYASDLVFLVCLTSTVFIFSEIRKWFSRTHER 286
>12151
Length = 880
Score = 87.0 bits (214), Expect(2) = 1e-22, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Frame = +3
Query: 652 KAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQXXXXXX 711
+ AD+G AMG +GTDV KEA+D+IL DD+F +I+ A+ G+ +Y++I F++FQ
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 712 XXXXXXXXXXMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILT 771
+PL A+Q+LW+N+IMD + +L E +++++ P +++
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPYGRTKPLIS 647
Query: 772 KNXXXXXXXXXXXXXCGTLFVF-------W--RELRDNVITPRDT----TMTFTCFVFFD 818
K L + W R + TPR T T+ F FV
Sbjct: 648 KTMWKNILGHAFYQILVILLLLFQGAKAVWDRRWHPTSRETPRPTNQHFTIIFNAFVMMT 827
Query: 819 MFNALSSR 826
+FN +++R
Sbjct: 828 LFNEVNAR 851
Score = 38.5 bits (88), Expect(2) = 1e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Frame = +1
Query: 571 DSQETAIAIASRLGLYSKTSQSV--SGEEVDTM--------EVQHLSQIVPKVAVFYRAS 620
D+ TA +IAS+ G+ + G+E + + + + ++ P + V R+S
Sbjct: 1 DNVNTARSIASKCGIIQPGDDGLVLEGKEFNQLIRDAEGEISQEKVDEVWPNLRVLARSS 180
Query: 621 PRHKMKIIKSL-----QKNGAVVAMTGDGVNDAVALK 652
P+ K ++K + + VVA+TGDG ND ALK
Sbjct: 181 PQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPALK 291
>28890
Length = 552
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Frame = -3
Query: 120 QEYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRLFEAV 179
QE +S K ++ LVP VR + A +LV GD V GDRVPADLR+ A
Sbjct: 526 QEAKSSKIMDSFKNLVPQFAVVVRGDQKLSVKAEELVVGDIVECKFGDRVPADLRVISAH 347
Query: 180 DLSVDESSLTGETAPCSKVTAPQPAANGDLASRSNIAFMGTLVRCGKAKGIVIGTGENSE 239
VD SSLTGE+ P S+ + + L +R NI F T G +GIVI TG+++
Sbjct: 346 GFKVDNSSLTGESEPQSR--SAEFTHENPLETR-NICFFSTNAVEGTCRGIVIKTGDDTV 176
Query: 240 FGEVFKMMQAEEAPKTPLQKS----MDLLGKQLSFY--SFGIIGIIMLVGWL 285
G + + E TP+ K + ++ F SF +I I+ WL
Sbjct: 175 MGRIANLASGLEVGDTPIAKEIAHFIHIITGVAVFLGVSFFVIAFILGYFWL 20
>29829
Length = 465
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 68/117 (58%)
Frame = -3
Query: 656 IGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQXXXXXXXXXX 715
+G AMG +GTDV KEA+D+IL DD+F +I+ A+ G+ +Y++I F++FQ
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 716 XXXXXXMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTK 772
+PL A+Q+LW+N+IMD + +L E +++++ P +++K
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYGRTKPLISK 110
>14773
Length = 794
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%)
Frame = +2
Query: 665 TDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQXXXXXXXXXXXXXXXXMNF 724
+DV K+AADMIL+DD+F +I++ +EEG+ I++N+K + +
Sbjct: 2 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGT 181
Query: 725 PNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTK 772
P PL + IL+I++ D PA SL E + D++++PPR D ++ +
Sbjct: 182 PLPLGVITILFIDLGTDMVPAISLAYEMAESDIMKRPPRTISDRLVNE 325
>08160
Length = 459
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Frame = +2
Query: 308 GLPIVVTVTLALGVMRMVKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHILTS 367
GL VTV L L RM +K +VK L VETLG + ICSDKTGTLT+N MTV H+
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMW-- 175
Query: 368 DGLHAEVTGVGYNQFGEVIVDGDVVHGFYNPAVSR-------IVEAGCVCNDAVIRNNT- 419
F IV+ D N SR + G +CN A + N
Sbjct: 176 --------------FDGRIVEADTSDDQSNATYSRTDVTWMALARVGMLCNRAEFKGNQD 313
Query: 420 --------LMGKPTEGALIALAMKMGLDGLQQDYIRK----AEYPFSS 455
G +E AL+ A+++ + G +Y R+ E PF+S
Sbjct: 314 NVPILKRECNGDASESALLK-AVELSI-GQVTEYRRRNKKIVEIPFNS 451
>04985
Length = 1671
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 5/164 (3%)
Frame = -1
Query: 604 QHLSQIVPKV----AVFYRASPRHKMKIIKSLQKNGAVVAMTGDGVNDAVALKAADIGVA 659
H +++PKV VF R +P K +I++LQ +V M GDG ND ALKAA G++
Sbjct: 1653 NHFPELLPKVCTQGTVFARMAPDQKCALIENLQSYDYIVGMCGDGANDCEALKAAHAGIS 1474
Query: 660 MGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQXXXXXXXXXXXXXX 719
+ + V I ++ + +++A+ EG+ + +F F+
Sbjct: 1473 LSEAEASVAAPFTSRI---NNIECVVTAMREGRAAL--VTSFGCFKYMALYSFIQFISVL 1309
Query: 720 XXMNFPNPLNAMQILWINIIMDGPPAQSLGVE-PVDKDVIRKPP 762
L+ ++ L+I++I+ A LG DK V KPP
Sbjct: 1308 ILYTCQTNLSDLEFLYIDLIITTTIAVLLGYTGAYDKLVRHKPP 1177
>14321
Length = 568
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +2
Query: 582 RLGLYSKTSQSVSGEEVDTMEVQH---LSQIVPKVAVFYRASPRHKMKIIKSLQKNGAVV 638
R + K ++GE + ++ H L ++P VF R +P+ K II L+ G V
Sbjct: 158 RKSIIPKYDLCLTGESLTFLQSDHPKLLRLLLPNTRVFARVAPKQKELIITVLKAQGFVT 337
Query: 639 AMTGDGVNDAVALKAADIGVAM 660
M GDG ND ALK AD+GVA+
Sbjct: 338 LMCGDGTNDVGALKHADVGVAL 403
>13525
Length = 645
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 319 LGVMRMVKKRAIVKKLPIVETLGCCNVICSDKTG 352
L RM +K +VK L VETLG + ICSDKTG
Sbjct: 2 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 103
>07486
Length = 763
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = -1
Query: 650 ALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIE 689
AL AD+G+A+G TGTDV EAAD++L+ D + +AI+
Sbjct: 742 ALAQADVGIAIG-TGTDVAVEAADIVLMKSDLVDVYAAIK 626
>21541
Length = 445
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 45/108 (41%)
Frame = +3
Query: 142 VREGKLEHTLARDLVPGDTVCLSVGDRVPADLRLFEAVDLSVDESSLTGETAPCSKVTAP 201
+R G+L +++ G+ + GD +PAD + ++ DL + PC K
Sbjct: 135 IRNGELHQIPVGEILVGEICQIKYGDLLPADGVIIQSNDLKNRREFVNRRVGPCEKGRGQ 314
Query: 202 QPAANGDLASRSNIAFMGTLVRCGKAKGIVIGTGENSEFGEVFKMMQA 249
P AF+ G+ K +V G NS+ G +F ++ A
Sbjct: 315 GPH-----------AFVRHPCNGGQWKMVVTAVGVNSQTGIIFALLGA 425
>17925
Length = 510
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +3
Query: 593 VSGEEVDTMEVQHLSQIVPKVA--VFYRASPRHKMKIIKSLQKNGAVVAMTGD 643
+ G ++ M+ + + I+ VF R SP+ K+ I++ Q+NG +VA+TG+
Sbjct: 336 IHGGDLKNMDAKDIDDILHNFVEIVFARTSPQQKLIIVEGCQRNGQIVAVTGE 494
>33697
Length = 310
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 543 IIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAIAIASRLGLYSKTSQSVSG 595
+IDPPR V +AV ++G+ + M+TGD T+ R G Y Q G
Sbjct: 201 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITSQGHRQRGGDYLGGQQDSGG 43
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6754900|ref|NP_035981.1| 5' nucleotidase, ecto [Mus
musculus]
(576 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19065 381 e-106
29237 106 3e-23
18163 96 3e-20
18141 72 8e-13
34373 36 0.046
06432 33 0.39
18153 28 7.5
>19065
Length = 1859
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/438 (46%), Positives = 283/438 (64%), Gaps = 3/438 (0%)
Frame = +1
Query: 116 ALGNHEFDNGVEGLIDPLLRNVKFPILSANIKARGPLAHQISGLFLPSKVLSVGGEVVGI 175
LGNHEFD G G +D L +FP+LS+N+ A L H I S ++ +GG+ VGI
Sbjct: 529 GLGNHEFDLGETG-VDEFLSLAQFPVLSSNLNA-SQLPH-IESRVKRSVIVQIGGQAVGI 699
Query: 176 VGYTSKETPFLSNPGTNLVFEDEISALQPEVDKLKTLNVNKIIALGHSGFEMDKLIAQKV 235
VGYT+ +T +S PG L F DE+ A++ EV KL + V K++ +GH+GF D +IA+ V
Sbjct: 700 VGYTTTDTAIISKPG-RLTFSDEVEAVRSEVTKLTSQGVTKVVCVGHAGFMTDLMIARNV 876
Query: 236 RGVDIVVGGHSNTFLYTGNPPSKEVPAGKYPFIVTADDGRQVPVVQAYAFGKYLGYLKVE 295
GVD+VVGGH+NTFLYTG P E P G YP +V +DG + VVQ YAFGKYLG+L+VE
Sbjct: 877 SGVDVVVGGHTNTFLYTGTAPGHEEPEGDYPQVVEREDGSRALVVQDYAFGKYLGFLQVE 1056
Query: 296 FDDKGNVITSYGNPILLNSSIPEDATIKADINQWRIKLDNYSTQELGRTIVYLDGSTQTC 355
FDD G V + GNPILL++S+P DA ++ ++ +WR ++ + Q +G T+V L G C
Sbjct: 1057FDDAGQVTSWSGNPILLDNSVPRDAAMQTELAKWRAGVEEMAQQVVGSTLVQLVGEPSVC 1236
Query: 356 RFRECNMGNLICDAMINNNLRHPDEMFWNHVSMCIVNGGGIRSPIDEKNNGTITWENLAA 415
R ECN+GNLI DAM+ NLRH D + WNHV++ I NGGGIR + + G IT ++ +
Sbjct: 1237RMGECNLGNLITDAMVVQNLRHSDSVEWNHVAIAIFNGGGIRYSV---SKGDITVADVLS 1407
Query: 416 VLPFGGTFDLVQLKGSTLKKAFEHSVHRYG--QSTGEFLQVGGIHVVYDINRKPWNRVVQ 473
V PF + D+V+L G+ L EHS + + G FLQ G+HVVY++++ RV
Sbjct: 1408VSPFRNSIDIVELNGTALWAVMEHSASLWDPLEHQGGFLQHSGLHVVYNMSQPKGQRVXS 1587
Query: 474 LEVLCTKCRVPIYEPLEMDKVYKVTLPSYLANGGDGFQMIKDELLKHD-SGDQDISVVSE 532
++V C C VP E LE+ KVYKV +P++L GGDG+ +I D ++KH +GD D V++E
Sbjct: 1588IKVKCADCEVPQMEGLELSKVYKVVVPNFLVVGGDGYNVIADNMIKHHLNGDLDTDVITE 1767
Query: 533 YISKMKVVYPAVEGRIKF 550
Y+ K + +EGRI+F
Sbjct: 1768YVKKFSPITQGLEGRIRF 1821
>29237
Length = 419
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
Frame = +1
Query: 303 ITSY-GNPILLNSSIPEDATIKADINQWRIKLDNYSTQELGRTIVYLDGSTQTCRFRECN 361
I SY G P L ++S+ +D + WR ++ Q +G+++V L+G CR RECN
Sbjct: 1 IVSYEGKPHLQDASVAQDNATLEKLQPWREGIEGMRNQTVGQSLVRLEGDRTVCRRRECN 180
Query: 362 MGNLICDAMINNNLRHPDEMFWNHVSMCIVNGGGIRSPIDEKNNGTITWENLAAVLPFGG 421
MGN++ D M+ NLR + W+ VS+ I N GGIR I GTIT+ ++ +V PFG
Sbjct: 181 MGNVLSDGMLYYNLRKGNSSGWSEVSIAISNAGGIRESI---QTGTITYGDVLSVQPFGN 351
Query: 422 TFDLVQLKGSTLKKAFEHSV 441
D ++++G LK+AF ++
Sbjct: 352 KIDAIRIEGRYLKQAFXSAL 411
>18163
Length = 477
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Frame = -3
Query: 341 LGRTIVYLDGSTQTCRFRECNMGNLICDAMINNN-LRHPDEMFWNHVSMCIVNGGGIRSP 399
+G T V L+G + CR RECN+GNLI D+M++ L + +W + ++ GGGIR+
Sbjct: 418 VGYTKVKLEGGS-ICRRRECNLGNLIADSMVHTRVLEYKGGDYWTDAPIALLQGGGIRTT 242
Query: 400 IDEKNNGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYG-QSTGEFLQVGGIH 458
ID+ NG+IT ++ VLP+ + ++ G TL+ A E S G S G FLQ+ GI
Sbjct: 241 IDKNLNGSITGSDILTVLPYENNLYVTRISGKTLRNALERSAFVRGTDSDGGFLQLAGIR 62
Query: 459 VVYDINRKPWNRVVQLEVLC 478
V YD + +V V C
Sbjct: 61 VEYDYGKAAGQQVTSALVRC 2
>18141
Length = 433
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = -2
Query: 461 YDINRKPWNRVVQLEVLCTKCRVPIYEPLEMDKVYKVTLPSYLANGGDGFQMIKDELLKH 520
Y++ + RVV L+ LCT C+VP ++P+E + VYKV L +++ GGDG+ + +++ ++
Sbjct: 429 YNLAKPDGQRVVSLKALCTDCQVPEFKPVEDNTVYKVILSNFVYKGGDGYTVFREKSTEY 250
Query: 521 -DSGDQDISVVSEYISKMKVVYPAVEGRIKFSAASHYQGSFPLVILSFWAMILIL 574
+ GD D V YI +Y AVE RI+F + S + + ++LIL
Sbjct: 249 INLGDLDSDVFIHYIRDYSPLYTAVEERIQFVHDNCDSTSLASLPCALRPLLLIL 85
>34373
Length = 668
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Frame = +2
Query: 505 NGGDGFQMIKD-ELLKHDSGDQDISVVSEYISKMKVVYPAVEGRI-----KFSAASHYQG 558
NGGDG+++I+D E D S+Y+ VYP +E RI K SAAS + G
Sbjct: 5 NGGDGYKLIEDKEPFSELMLLNDQFAFSKYLEARHYVYPEIEDRIVMHEPKNSAASIF-G 181
Query: 559 SFPLVILS 566
S LV+LS
Sbjct: 182 SIVLVMLS 205
>06432
Length = 1334
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 462 DINRKPWNRVVQLEVLCTKCRVPI-YEPLEMDKVYKVTLPSYLANGGDGFQMIK 514
D ++ WNRV+ + +LC R+ I + P + +++K+ GFQ+++
Sbjct: 1083 DFRQEIWNRVISVSMLCVNYRLNIDFFPFQFSRIFKLCFRLV-----SGFQLLE 937
>18153
Length = 1018
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 458 HVVYDINRKPWNRVVQLEVLCTKC-RVPIYEPLEMDKVYKVTLPSY 502
H +Y IN + WN+ +++ RV +EP+E+D V SY
Sbjct: 352 HGLYQINHQLWNKRIEIYSHSLLLYRVVYFEPVELDSV*SAATLSY 215
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6755863|ref|NP_035761.1| tumor rejection antigen gp96
[Mus musculus]
(802 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01628 381 e-106
11278 376 e-104
15623 197 2e-55
27487 104 1e-22
25874 70 4e-12
>01628
Length = 2109
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/417 (45%), Positives = 276/417 (66%), Gaps = 1/417 (0%)
Frame = -3
Query: 334 ELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSA 393
E +N KP+W R ++ +EY FYKS + + +D +A HF+ EG++ F+++LF+P A
Sbjct: 1957 EELNKTKPLWTRNPDDITAEEYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPKRA 1778
Query: 394 PRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQ 453
P +F+ K + IKLYVRRVFI D+ D++P+YLNFVKGVVDS+DLPLN+SRE LQQ
Sbjct: 1777 PFDMFENKKKKNN--IKLYVRRVFIMDNCEDIIPEYLNFVKGVVDSEDLPLNISREMLQQ 1604
Query: 454 HXXXXXXXXXXXXXXXDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRF 512
++I +A++K N + F+++F N+KLG+ ED +NR +++ LR+
Sbjct: 1603 SKILKVIRKNLVKKCMELIDDLAEDKDNYNKFYEQFAKNLKLGIHEDSTNRKKISDFLRY 1424
Query: 513 QSSHHSTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPV 572
SS + ++ + +YV RMK+ Q IY++ G +R+ ++S FVER+ K+G+EV+Y+ +P+
Sbjct: 1423 HSSQSADEMVTFKEYVSRMKDNQKDIYYITGETREAVQNSAFVERVKKRGFEVLYMVDPI 1244
Query: 573 DEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREATEKEFEPLLNWMKDKALKDKIE 632
DEYC+Q L E+DGK V KEG++ E E K+ E + EFE L MK+ L K+E
Sbjct: 1243 DEYCVQQLKEYDGKNLVCVTKEGLELPEDEAEKKKFEEAKAEFEGLCKAMKE-ILDKKVE 1067
Query: 633 KAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHP 692
K VSQRL SPC +V SQYGWS NMERIMKAQA +D ST Y + KK FEINP HP
Sbjct: 1066 KVTVSQRLVSSPCCIVTSQYGWSANMERIMKAQAL---RDTSTMGYMAAKKHFEINPDHP 896
Query: 693 LIRDMLRRIKEDEDDKTVMDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNI 749
+++ + + D++DK+V DL ++LFETA L SG+ L D ++ +RI RM++L L I
Sbjct: 895 IVKTLKVKCDADKNDKSVKDLCMLLFETALLSSGFTLEDPTSHANRIHRMVKLGLGI 725
>11278
Length = 988
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/250 (73%), Positives = 216/250 (86%)
Frame = +1
Query: 35 LGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLY 94
LGKS E SRTDDE VQ+EEEAI+LDGLN +Q++ELREKSEKFAFQAEVNRMMKLIINSLY
Sbjct: 142 LGKSMEASRTDDETVQKEEEAIKLDGLNVAQMKELREKSEKFAFQAEVNRMMKLIINSLY 321
Query: 95 KNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGM 154
KNKEIFLRELISNASDALDKIR +SLT+++ L +EL++KIK D E ++LHVTDTG+GM
Sbjct: 322 KNKEIFLRELISNASDALDKIRFMSLTNKDVLHATDELSIKIKADTENHVLHVTDTGIGM 501
Query: 155 TREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSK 214
T +LVKNLGTIAKSGTS+FL KM EA ++LIGQFGVGFYS+FLVAD+V+VTSK
Sbjct: 502 TYNDLVKNLGTIAKSGTSDFLAKMGEASP--TELNDLIGQFGVGFYSSFLVADRVVVTSK 675
Query: 215 HNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVRKYSQF 274
HN+D Q++WESD+ FSV DPRGNTLGRGTTI+L LKEEA D+LE T+ +LV+KYSQF
Sbjct: 676 HNDDEQYVWESDAESFSVAKDPRGNTLGRGTTISLHLKEEAHDFLEAGTLTSLVKKYSQF 855
Query: 275 INFPIYVWSS 284
INF IY+WSS
Sbjct: 856 INFNIYMWSS 885
>15623
Length = 2811
Score = 197 bits (502), Expect(2) = 2e-55, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 133/184 (72%)
Frame = -1
Query: 96 NKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMT 155
+EIFLRELISN+SDALDKIR SLTD + L ++L ++I DKE+ L + D+G+GMT
Sbjct: 588 QQEIFLRELISNSSDALDKIRYESLTDPSKLDAGKDLHIRIVPDKERKTLTIEDSGIGMT 409
Query: 156 REELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKH 215
+ +LV NLGTIAKSGT F+ EA + G S +IGQFGVGFYSA+LVAD+V+V SK+
Sbjct: 408 KADLVNNLGTIAKSGTKAFM----EALQAGADIS-MIGQFGVGFYSAYLVADRVVVESKN 244
Query: 216 NNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVRKYSQFI 275
N+D Q+ WES + IA P G +GRGT ITL +KE+ +YLE IK +++K+SQFI
Sbjct: 243 NDDEQYTWESSAGGSFTIAAPTGTPMGRGTRITLFMKEDQQEYLEERRIKEVIKKHSQFI 64
Query: 276 NFPI 279
+PI
Sbjct: 63 GYPI 52
Score = 37.4 bits (85), Expect(2) = 2e-55, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -2
Query: 74 EKFAFQAEVNRMMKLIINSLYKNKE 98
E FAFQAE+ ++M LIIN+ Y NK+
Sbjct: 653 ETFAFQAEIAQLMSLIINTFYSNKK 579
>27487
Length = 377
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Frame = -3
Query: 450 TLQQHXXXXXXXXXXXXXXXDMIKKIADEKYND---TFWKEFGTNIKLGVIEDHSNRTRL 506
TLQQ+ +M +IA+ ND F+++F N+KLG+ ED +NRT+L
Sbjct: 375 TLQQNKILKVIKKNIVKKCLEMFAEIAEN--NDDYKKFYEQFSKNLKLGIHEDTTNRTKL 202
Query: 507 AKLLRFQSSHHSTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVI 566
L+RF +S D SL +Y+ RMKE Q I+++ G SR ++SPF+E+L KKGYEV+
Sbjct: 201 VDLMRFHTSKSGEDQISLKEYIARMKEGQKDIFYITGESRAAVQASPFIEQLRKKGYEVL 22
Query: 567 YLTEPVD 573
YL +P+D
Sbjct: 21 YLVDPID 1
>25874
Length = 476
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +1
Query: 191 LIGQFGVGFYSAFLVADKV-IVTSKHNNDTQHI-WESDSNEFSVIADPRGNTLGRGTTIT 248
LIGQFGVGFYS F+V D+V + T H + + W SD + +++ G + RGT I
Sbjct: 1 LIGQFGVGFYSTFMVGDRVDVFTKSHQPGSPALKWSSDGSGAYEVSEAEG--VQRGTKIV 174
Query: 249 LVLKEEASDYLELDTIKNLVRKYSQFINFPIYV 281
+ LK ++ D+ + + I +V+KYS F+ PIY+
Sbjct: 175 VHLKGDSYDFAKEEIITGVVKKYSNFVGVPIYL 273
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|71067352|ref|NP_032161.2| solute carrier family 6
member 9 [Mus musculus]
(633 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08387 267 e-106
15924 358 4e-99
08953 330 1e-90
18526 229 4e-60
32211 129 2e-54
14556 183 2e-46
19604 159 2e-39
33291 86 5e-25
02570 100 2e-21
21405 85 3e-20
21870 84 6e-20
25926 76 5e-14
14638 69 4e-12
26038 66 4e-11
26872 54 1e-07
31151 53 3e-07
28188 29 4.5
>08387
Length = 4991
Score = 267 bits (683), Expect(3) = e-106, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 241/432 (55%), Gaps = 13/432 (3%)
Frame = -2
Query: 200 VLKLSDDIGNFGEVRLPLLGCLGVSWVVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFV 259
VLK+SD I + G V+ L CL ++WVVV+ C+ +G++SSGKV+Y TAT PY+ + IL +
Sbjct: 4417 VLKISDGIDDMGTVKWDLALCLLLAWVVVYACICKGIRSSGKVMYVTATSPYIFMLILLI 4238
Query: 260 RGVTLEGAFTGIMYYLTPQWDKILEAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNC 319
R L+GA G+ +YLTP K+ E +VW DA +QIF+S A G L + SYNKF +N
Sbjct: 4237 RNSLLDGAKEGVDFYLTPNMTKLGEMEVWVDAGTQIFFSSSIALGTLTALGSYNKFKHNS 4058
Query: 320 YRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLP 379
YRDSVI ++ N TS +AGF++F+ILG+MA + VA+ GPGLAF+AYP+A+ +P
Sbjct: 4057 YRDSVIFALVNSVTSFFAGFIVFTILGYMAKLQNRPIKDVAESGPGLAFIAYPKAVAQMP 3878
Query: 380 ISPXXXXXXXXXXXXXXXGTQFCLLETLVTAIVDEVGNEWILQK--KTYVTLG-VAVAGF 436
+SP +QF +E +VT IVD+ +L+K + + +G + + F
Sbjct: 3877 LSPLWSILFFLMVILLGLDSQFVGVEGVVTTIVDQYPR--LLRKGYRKEIFIGFICIIMF 3704
Query: 437 LLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVSIMYIYGHRNYFQDIQMMLG---- 492
+G+ + S G+Y L D Y+ S +++++ + I YIYG + +I+MMLG
Sbjct: 3703 FVGLAMVSNGGMYVFQLFDYYSGSRIILLVAFFELIGISYIYGVFRFLDNIKMMLGDHWM 3524
Query: 493 FPPPLFFQICWRFVSPAIIFFILIFTVIQY------RPITYNHYQYPGWAVAIGFLMALS 546
F +CW +SPA I + + I Y RP + Y YP WAV IG+ +A S
Sbjct: 3523 VKTLPFMVVCWTVLSPAFCIAIFVMSAINYSELDYARPGSKGTYVYPDWAVGIGWALAAS 3344
Query: 547 SVICIPLYALFQLCRTDGDTLLQRLKNATKPSRDWGPALLEHRTGRYAPTTTPSPEDGFE 606
S + IP+ A+++ + +G T L+ LK KP L E G G +
Sbjct: 3343 SAVWIPIVAIYKWVK-NGAT-LEALKLLCKPYGLKEHQLREQDKGERTLADLERERAGEQ 3170
Query: 607 VQPLHPDKAQIP 618
+ ++A +P
Sbjct: 3169 SYNGNVNQAYVP 3134
Score = 98.6 bits (244), Expect(3) = e-106, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 66/108 (61%)
Frame = -1
Query: 64 AFMFPYFIMLIFCGIPLFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYY 123
AF+ PYFI +IF GIPLF++E++ GQF ++G L W + P+ +G+G ++ ++ YY
Sbjct: 4790 AFLIPYFICVIFGGIPLFYLEVAVGQFMNRGGLQAWNLVPILQGIGLASCIIVFFLNCYY 4611
Query: 124 NVVICIAFYYFFSSMTHVLPWAYCNNPWNTPDCAGVLDASNLTNGSRP 171
NV++ AFYYFFSS T LPW C++ WN V + + P
Sbjct: 4610 NVILTWAFYYFFSSFTSELPWETCDHDWNNKTVCAVDFQAKVNETGDP 4467
Score = 60.1 bits (144), Expect(3) = e-106, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = -3
Query: 8 GMLNGAVPSEATKKDQNLTRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGG 63
G +G E + R WG +F+L +G++VGLGNVWRFPYLCY+NG G
Sbjct: 4956 GRADGVKEGEDEEGKDLNKREQWGRAFDFLLACIGFSVGLGNVWRFPYLCYKNGEG 4789
>15924
Length = 2588
Score = 358 bits (919), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 182/412 (44%), Positives = 264/412 (64%), Gaps = 2/412 (0%)
Frame = +3
Query: 190 SPSEEYWRLYVLKLSD--DIGNFGEVRLPLLGCLGVSWVVVFLCLIRGVKSSGKVVYFTA 247
SP+ +Y YVL+L++ D+ N G + L ++ L ++W+++F CL++GVKSSGKVVYFTA
Sbjct: 69 SPAADYLSQYVLRLNEATDMANLGGISLKMILTLALAWLLIFFCLMKGVKSSGKVVYFTA 248
Query: 248 TFPYVVLTILFVRGVTLEGAFTGIMYYLTPQWDKILEAKVWGDAASQIFYSLGCAWGGLI 307
TFPYV+L +L VRGVTLEG G+ +Y+ P+WDK+ +AKVWGDAA+QIFYSLG +GGL+
Sbjct: 249 TFPYVILVVLLVRGVTLEGHLDGVKFYVIPEWDKLADAKVWGDAATQIFYSLGVGFGGLL 428
Query: 308 TMASYNKFHNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLA 367
TMASYNKF NNCYRD++++++ NC+TS++AGF IFS+LG MA+ V VA GPGLA
Sbjct: 429 TMASYNKFKNNCYRDAIMVAVINCSTSIFAGFAIFSLLGHMAHVNNQAVEDVASSGPGLA 608
Query: 368 FVAYPEALTLLPISPXXXXXXXXXXXXXXXGTQFCLLETLVTAIVDEVGNEWILQKKTYV 427
FVAYPE +T LP +QF ++ET+++ I D + ++K
Sbjct: 609 FVAYPEGITKLPAQSLWSFLFFFMILTLGLDSQFAMMETVISGISDMFPRT-LRKRKVLF 785
Query: 428 TLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVSIMYIYGHRNYFQDI 487
T + GFLLGIP ++ G++ L LMD Y+ S++L+ ++ + IMY+YG RN+ D+
Sbjct: 786 TFCACLVGFLLGIPQATKGGMWVLTLMDWYSGSYNLMFVALAELICIMYVYGWRNFSNDV 965
Query: 488 QMMLGFPPPLFFQICWRFVSPAIIFFILIFTVIQYRPITYNHYQYPGWAVAIGFLMALSS 547
+MM+GF P +++ W ++P I FI+I IQY P +Y+ Y++ W +G++M
Sbjct: 966 EMMVGFKPNIYWLANWLVITPIAIGFIIIIGAIQYTPASYDGYEFEDWVQGLGWVMVTVP 1145
Query: 548 VICIPLYALFQLCRTDGDTLLQRLKNATKPSRDWGPALLEHRTGRYAPTTTP 599
+ I + Q+ R + K DWGPA E RTGRYAP P
Sbjct: 1146IASIFVVGFVQMARYG-------VPGCFKAQPDWGPANPEDRTGRYAPVGLP 1280
>08953
Length = 2245
Score = 330 bits (846), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/376 (44%), Positives = 247/376 (65%)
Frame = +1
Query: 221 LGVSWVVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFVRGVTLEGAFTGIMYYLTPQWD 280
L ++W+++F CL++GVKSSGKVVYFTATFPYV+L +L VRGVTL G GI +Y P+WD
Sbjct: 16 LALAWILIFFCLMKGVKSSGKVVYFTATFPYVILLVLLVRGVTLSGHLEGIKFYTIPKWD 195
Query: 281 KILEAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCYRDSVIISITNCATSVYAGFV 340
K+ +AKVWGDAA+QIFYSLG +GGL+TM+SY+KF NNC+RD++++++ NC TS++AGF
Sbjct: 196 KLADAKVWGDAATQIFYSLGVGFGGLLTMSSYSKFKNNCHRDAIMVALINCGTSIFAGFA 375
Query: 341 IFSILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLPISPXXXXXXXXXXXXXXXGTQ 400
IF++LG MA DV +VAD GPGLAFVAYPE +T LP +Q
Sbjct: 376 IFALLGHMAYVTNQDVDKVADSGPGLAFVAYPEGITKLPAMSLWAFLFFFMILTLGLDSQ 555
Query: 401 FCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAAS 460
F ++ET+++ I D + + KT+ T + GFLLGIP ++ G++ L LMD Y+ S
Sbjct: 556 FAMMETVISGISDMF-PRLLRKHKTFFTFICCLVGFLLGIPQATKGGMWVLTLMDWYSGS 732
Query: 461 FSLVVISCIMCVSIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILIFTVI 520
++L+ ++ + +MY+YG +++DI+MM+G P +++I W ++P I FI++ +
Sbjct: 733 YNLMFVALAEIICLMYVYGFNKFYEDIEMMIGHKPNYYWRIHWLAITPIAIIFIIVIGAV 912
Query: 521 QYRPITYNHYQYPGWAVAIGFLMALSSVICIPLYALFQLCRTDGDTLLQRLKNATKPSRD 580
QY P +Y+ Y++ W +G++M + I + Q+ R + KP+ D
Sbjct: 913 QYTPASYSGYEFEBWVQGLGWVMVSVPIALIFIVGFVQMFRYG-------VPGCFKPTPD 1071
Query: 581 WGPALLEHRTGRYAPT 596
WGPA E+RTGRYAPT
Sbjct: 1072WGPADPENRTGRYAPT 1119
>18526
Length = 537
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 137/174 (78%)
Frame = -2
Query: 209 NFGEVRLPLLGCLGVSWVVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFVRGVTLEGAF 268
+ G VR LL L VSW+ VFLCL +GVK GKV++F A FPY+VL +L +RGVTL GA
Sbjct: 536 SLGTVRWQLLITLAVSWLCVFLCLFKGVKVLGKVMHFAAPFPYMVLLVLLIRGVTLPGAI 357
Query: 269 TGIMYYLTPQWDKILEAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCYRDSVIISI 328
GI +Y+ P+W+K+LE +VWGDAA QIFYS+G AWGG+ITMASYNKF+NN YRD++I+ +
Sbjct: 356 DGISFYIIPRWEKLLEFQVWGDAALQIFYSVGMAWGGIITMASYNKFNNNVYRDAMIVPL 177
Query: 329 TNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLPISP 382
NC TS++AGFVIFSILGFMA+ G +V + GPGL FVAYPEA++ LPISP
Sbjct: 176 INCGTSIFAGFVIFSILGFMAHEAGKNVEDIVTQGPGLTFVAYPEAVSKLPISP 15
>32211
Length = 836
Score = 129 bits (325), Expect(2) = 2e-54, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 83/112 (74%)
Frame = -2
Query: 231 CLIRGVKSSGKVVYFTATFPYVVLTILFVRGVTLEGAFTGIMYYLTPQWDKILEAKVWGD 290
C+ +G+KSSGKV+YFTAT PYV++ +L +RGVTLEGA TG+ YYL P+W ++ + +VW D
Sbjct: 835 CIWKGIKSSGKVMYFTATTPYVLMFVLLIRGVTLEGASTGLKYYLLPEWSRLKDPQVWVD 656
Query: 291 AASQIFYSLGCAWGGLITMASYNKFHNNCYRDSVIISITNCATSVYAGFVIF 342
A +QIF+S + G L + SYN+F +N +RDSV ++ N TS AGFVIF
Sbjct: 655 AGTQIFFSYSISLGTLTALGSYNRFTHNVFRDSVCFAVINTFTSFLAGFVIF 500
Score = 101 bits (252), Expect(2) = 2e-54, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Frame = -1
Query: 343 SILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLPISPXXXXXXXXXXXXXXXGTQFC 402
SILGFMA G+DV+ VA+ GPGLAF+AYPEA+ LPI+P +QF
Sbjct: 500 SILGFMAVRQGLDVADVAESGPGLAFIAYPEAVAQLPIAPLWSVMFFVMVILLGLDSQFV 321
Query: 403 LLETLVTAIVDEVGNEWILQKKTYVTLG-VAVAGFLLGIPLTSQAGIYWLLLMDNYAASF 461
+E +TA+VD + V + + V + +G+ + ++ G+Y L D Y+AS
Sbjct: 320 GVEGFITAVVDLYPRVLRRGHRREVFIAIICVIAYFIGLSMVTEGGMYVFQLFDYYSASR 141
Query: 462 SLVVISCIMCVSIMYIYGHRNYFQDIQMMLGFPPPLFFQICW 503
++V++ C+++ Y+YG ++ +++MM GF ++ W
Sbjct: 140 IVLVVAFFECITVAYVYGVDRFYDNLEMMFGFRMGPLMKVSW 15
>14556
Length = 552
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
Frame = -2
Query: 16 SEATKKDQNLTRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLIF 75
SE+ +++ RGNWG+Q++F+L+ VGYAVGLGNVWRFPYL YRNGG F+FPY IMLI
Sbjct: 452 SESKMGSEDIERGNWGSQLDFLLSCVGYAVGLGNVWRFPYLAYRNGGATFLFPYIIMLII 273
Query: 76 CGIPLFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFF 135
G+PLFF+EL+ GQFAS+G + VW++SP F G+G+ M ++S + IYYNV+I A YY F
Sbjct: 272 AGLPLFFLELALGQFASEGPITVWKMSPFFSGIGFAMCIISGVVSIYYNVIITYAIYYMF 93
Query: 136 SSMTHV---LPWAYCNNPWNTPDC 156
S ++ LPWA CN+ W TP C
Sbjct: 92 VSFVNLDNDLPWASCNHTWATPSC 21
>19604
Length = 419
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 100/133 (75%)
Frame = -3
Query: 211 GEVRLPLLGCLGVSWVVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFVRGVTLEGAFTG 270
G R L CL +SWVVV LCLI+G+KSSGKVVYFTATFPYV+L IL +RG LEGA G
Sbjct: 399 GTPRWRLALCLLLSWVVVILCLIKGIKSSGKVVYFTATFPYVILIILLIRGALLEGAKEG 220
Query: 271 IMYYLTPQWDKILEAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCYRDSVIISITN 330
+ +++ P+WDK+ + KVW AA Q+F+SL ++GG+I SYNKF NN Y D+++IS+ +
Sbjct: 219 VEFFIIPEWDKLTDVKVWVAAAGQMFFSLSVSFGGIIMFGSYNKFTNNVYGDALLISVMD 40
Query: 331 CATSVYAGFVIFS 343
TSV AGFV+F+
Sbjct: 39 LVTSVIAGFVVFT 1
>33291
Length = 467
Score = 85.5 bits (210), Expect(3) = 5e-25, Method: Composition-based stats.
Identities = 40/67 (59%), Positives = 46/67 (68%)
Frame = -1
Query: 313 NKFHNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLAFVAYP 372
++ NN RDS+I+ I NC TS YAGF IFSILGFMA GV+V V G GL FVAYP
Sbjct: 341 HQVQNNAIRDSIIVPIINCLTSFYAGFAIFSILGFMAASKGVEVEDVTTDGTGLVFVAYP 162
Query: 373 EALTLLP 379
EAL +P
Sbjct: 161 EALARMP 141
Score = 46.2 bits (108), Expect(3) = 5e-25, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = -2
Query: 271 IMYYLTPQWDKILEAKVWGDAASQIFYSLGCAWGGLITMASYNKF 315
I +YL P K+ E+ VW AA+QIF+SL + G L M+SY KF
Sbjct: 466 IKFYLQPDASKLSESSVWLAAAAQIFFSLSTSTGSLTAMSSYTKF 332
Score = 21.6 bits (44), Expect(3) = 5e-25, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 398 GTQFCLLETLVTAIVDE 414
GTQ ETL+TA+ DE
Sbjct: 87 GTQIPSAETLLTALQDE 37
>02570
Length = 1067
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 118/227 (51%), Gaps = 10/227 (4%)
Frame = -3
Query: 368 FVAYPEALTLLPISPXXXXXXXXXXXXXXXGTQFCLLETLVTAIVDEVGNEWILQKKTYV 427
FVAYPEAL+ LP ++F L+ET++T I DE+ + K+ +
Sbjct: 1065 FVAYPEALSNLPPPQLWSVLFFFMLFTLGLDSEFGLMETILTCIQDEMPR--XRKYKSVM 892
Query: 428 TLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVSIMYIYGHRNYFQDI 487
+G + + L +P G Y + LMD+Y A FS++++SC +S+M+ YG + +D+
Sbjct: 891 CIGFGIGCYFLALPCVCNGGDYVVTLMDHYGADFSVLILSCFEVMSVMWXYGVMRFQKDL 712
Query: 488 QMMLGFPP---PLFFQICWRFVSPAIIFFILIFTVIQYRPITYNH---YQYPGWAVAIGF 541
+ MLG P P ++ CW ++P +I + ++ +++Y P Y+ + YP +A IG+
Sbjct: 711 EYMLGRRPMGWP-YWVFCWS-IAPILIAALFLYRMVEYVPPHYDSEKLHPYPQFAQNIGW 538
Query: 542 LMALSSVICIPLYALFQLCRTDGDTLLQRLKNAT----KPSRDWGPA 584
+ + + IPL+ ++ RT Q + +P+++W PA
Sbjct: 537 FLLVVVLCPIPLWFIYHAVRTYRQNSDQPISEIIAIMFRPTKEWRPA 397
>21405
Length = 542
Score = 85.1 bits (209), Expect(2) = 3e-20, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +2
Query: 416 GNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAAS-FSLVVISCIMCVSI 474
G+ + +++K V + +L+G+ +Q G+Y ++D+YA S F L+ + CVSI
Sbjct: 149 GHNYSVKRKEIFIAIVCMLSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSI 328
Query: 475 MYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILIFTVIQYRPITYNHYQYPG 534
+ YG ++ I+ M+G+ P ++++ CW F +PAI + F ++Q++ I Y Y YP
Sbjct: 329 SWCYGVDRFYDGIKDMIGYYPTVWWKFCWCFTTPAICLGVFFFNIVQWKSIKYLDYSYPW 508
Query: 535 WAVAIGFLMAL 545
WA A G+ AL
Sbjct: 509 WAHAFGWFTAL 541
Score = 32.0 bits (71), Expect(2) = 3e-20, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 369 VAYPEALTLLPISPXXXXXXXXXXXXXXXGTQFCLLETLVTAIVDE 414
+ YP A+ LP SP +QFC +E +TA++DE
Sbjct: 10 LVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAVIDE 147
>21870
Length = 347
Score = 83.6 bits (205), Expect(2) = 6e-20, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Frame = -2
Query: 22 DQNLTRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLIF 75
+++ TR WG +EF++T +G+AVGLGNVWRFPYLCYRNGGGAF+ PY I L F
Sbjct: 214 EESGTRATWGRHLEFIVTCIGFAVGLGNVWRFPYLCYRNGGGAFLIPYLISLGF 53
Score = 32.3 bits (72), Expect(2) = 6e-20, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -3
Query: 73 LIFCGIPLFFMELSFGQFAS 92
L+F GIPLF +E++FGQFAS
Sbjct: 60 LVFIGIPLFCLEITFGQFAS 1
>25926
Length = 675
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Frame = +1
Query: 476 YIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILIFTVIQYRPITYNH----YQ 531
++YG ++ +++MM GF + +ICW ++P I I I Y +TY Y+
Sbjct: 1 FVYGVNRFYDNLEMMFGFRVGPWMKICWTVLTPLYTMVIFIMGCISYSDLTYKRKTVTYE 180
Query: 532 YPGWAVAIGFLMALSSVICIPLYALFQLCRTDGDTLLQRLKNATKP 577
YP WA+ +G+ M S+I IPL +F++ DG + ++R+K+ TKP
Sbjct: 181 YPSWAIGVGWSMVAMSIIFIPLVMVFRMLTADG-SFVERVKHLTKP 315
>14638
Length = 421
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Frame = -3
Query: 435 GFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVSIMYIYGHRNYFQDIQMMLGFP 494
GF+LG+P T+Q G Y L L+D + F L+++ V+I+++YG R +D+ MM+G
Sbjct: 371 GFILGLPQTTQGGTYILDLLDIFVG-FPLLLVGFFEFVAIVWVYGFRRISEDVMMMMGDH 195
Query: 495 P------PLFFQICWRFVSPAIIFFILIFTVIQYRPITYNHYQYPGWAVAIGFLMALSSV 548
P +F W VSP ++ I++F + Y PIT YP WA +G+L+ +
Sbjct: 194 PITRMVYDFYFSWTWLVVSPGLLLAIIVFDSVNYVPITGP--GYPPWAETLGWLVVTFIM 21
Query: 549 ICIPLY 554
+ IP++
Sbjct: 20 MWIPVW 3
>26038
Length = 426
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = -2
Query: 404 LETLVTAIVDEVGNEWILQ-KKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFS 462
LE+ +T + DE+ ++ + +TL V + F +P ++ GIY ++D +AA S
Sbjct: 356 LESPLTGLHDELKTVMRMRYSREVLTLVVVGSAFFCSLPCLTEGGIYVFTILDTFAAGTS 177
Query: 463 LVVISCIMCVSIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILIFTVI 520
++ +++ + YG + +D++ M G P +++++CW+FV P ++F I+I ++I
Sbjct: 176 ILFTVLCQVIAVSWFYGINQFCRDVEKMTGSQPSMYWRVCWKFVCPILLFIIVISSII 3
>26872
Length = 406
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%)
Frame = +2
Query: 366 LAFVAYPEALTLLPISPXXXXXXXXXXXXXXXGTQFCLLETLVTAIVDEVGNEWILQKKT 425
L FVAYPEA++ LP + + F E ++TA+ DE + + +
Sbjct: 2 LVFVAYPEAISTLPGASFWAVIFFLMLLTLGLDSSFGGSEAIITALSDEF--PVLRRHRE 175
Query: 426 YVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVSIMYIYGHRNYFQ 485
L + V F++G+ ++ G+Y + L+D +AA +S++ +++ + YG + +
Sbjct: 176 LFVLALFVLYFIVGLASCAEGGLYVVNLLDQFAAGYSILFAVFFETLAVSWAYGLDRFSE 355
Query: 486 DIQMMLGFPP 495
D++ MLG P
Sbjct: 356 DLEAMLGHRP 385
>31151
Length = 322
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Frame = -2
Query: 476 YIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILIFTVIQYRPITYNHYQYPGW 535
+IYG +DI +MLG PP + W+F++PA++ +L+FT++ Y P +Y Y Y
Sbjct: 318 WIYGVARIREDICLMLGHGPPFILTVFWKFITPALLLVVLVFTLMNYTPPSYGQYVYGTG 139
Query: 536 AVAIGFLMALSSVICIP 552
G+++ALSS++ P
Sbjct: 138 GHVFGWVVALSSLLPSP 88
>28188
Length = 1255
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 319 CYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGL 366
C +V +T + S++ F+ H+G D SR+ DH PG+
Sbjct: 598 CLHXAVTHLLTTLSWSIWTFLSPRIWASFVQLHMGWDCSRMVDHNPGI 741
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|111154063|ref|NP_892035.2| structure specific
recognition protein 1 isoform 1 [Mus musculus]
(708 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
00782 378 e-105
19432 205 4e-53
26689 147 2e-35
11933 57 2e-08
33187 57 3e-08
24607 47 2e-05
14405 42 7e-04
21088 37 0.030
30503 35 0.12
27304 32 0.61
00223 30 4.7
29687 29 6.2
>00782
Length = 1035
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 224/273 (82%), Gaps = 3/273 (1%)
Frame = +3
Query: 195 TGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMF 254
TGDA+ E+QCLTPRGRYDI++YPTFL LHGKTFDYKIPYTT+LRLFLLPHKD RQMF
Sbjct: 3 TGDAVVTLSEMQCLTPRGRYDIKMYPTFLQLHGKTFDYKIPYTTILRLFLLPHKDGRQMF 182
Query: 255 FVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMV 314
FV+SLDPPIKQGQTRYHFLILLF+K++++++ + MNEE++++++E +L MSG YE+V
Sbjct: 183 FVVSLDPPIKQGQTRYHFLILLFNKEDEMTVEMGMNEEDLKQKYEDQLQSEMSGFEYEIV 362
Query: 315 SRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEI 374
SR+ K + RKITVPGNF GHSG Q ++CSYKA++G LYPLERGFI+VHKPP+HIRFDEI
Sbjct: 363 SRIFKVITQRKITVPGNFIGHSGTQAVSCSYKAATGFLYPLERGFIFVHKPPLHIRFDEI 542
Query: 375 SFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKN-RGLKEG 433
VNFAR TTRSFDF++ETK G Y F IE+ E+ KL+++V++KKL +KN G +
Sbjct: 543 VVVNFARNAGTTRSFDFDVETKTGNVYNFVGIEKNEFNKLYEYVSSKKLRVKNIGGPMDK 722
Query: 434 INPGYDDYADSDEDQ--HDAYLERMKEEGKIRE 464
+ Y++ + SD+D+ HDAY+E+M++EG+ R+
Sbjct: 723 SSVTYEEMSGSDDDKGDHDAYMEKMRKEGQQRQ 821
>19432
Length = 629
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 128/172 (74%)
Frame = +2
Query: 1 MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
M++ E++D+ QE++GS+N GRL+L R +IFKN+KTGKVD Q+ ++ + W + A GH
Sbjct: 86 MSDFQEYSDVVQEIRGSLNPGRLKLQRNSVIFKNNKTGKVDQFQSSDIEKSQWLKRARGH 265
Query: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
LK++ K G+ ++YDGF+E +FE+LS F + Y + L + DL +KGWNWG KF G L+
Sbjct: 266 CLKMVLKTGNTHRYDGFKEPDFERLSKFLQEFYEMSLEKVDLSIKGWNWGLAKFEGNSLN 445
Query: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQE 172
F++ VF+IPL+NVS TT KNEVTLEFHQNDDA V+LMEVRF++PP Q+
Sbjct: 446 FELDQSLVFDIPLTNVSHSTTSKNEVTLEFHQNDDAAVNLMEVRFHIPPEQQ 601
>26689
Length = 461
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Frame = +3
Query: 332 FQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARGTTTTRSFDF 391
F GHSG + CS+KA++G LYPLERGFIY+HKPP+HIRF+EIS VNFAR +TRSFDF
Sbjct: 21 FIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSGGSTRSFDF 200
Query: 392 EIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEGINP--GYDDYADSDEDQH 449
E+ K GT + FSSIE+EEY KLFD++ KKL++ N G +G N G + +
Sbjct: 201 EVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNIG--QG*NRL*GCRLWRFGQ*KRP 374
Query: 450 DAYLERMKEEGKIREENA 467
DAYL R+K E + + E+
Sbjct: 375 DAYLARLKAEAREKXEDG 428
>11933
Length = 1516
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Frame = +2
Query: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAED 602
DPN PKRPM+AY L+L R IK + G+ ++ + AGE W+ MS E K+ +++++ +
Sbjct: 866 DPNKPKRPMTAYFLFLGDFR--IKMKNRGVDHKEILRLAGEEWRNMSAEDKKPYEKRSVE 1039
Query: 603 ARREYEKAMKEYEGGRG 619
A ++YE M+EY G
Sbjct: 1040AGKKYEVEMEEYRKNEG 1090
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGIS-ITDLSKKAGEIWKGMSKEKKEEWDRKAE 601
D N PKR SAY +L RE IS I + +K+ W+ M +K+ ++ A
Sbjct: 632 DANKPKRSTSAYXYFLAHCREVSAKQGKTISRIAEFTKECSAKWREMGGAQKKPFEESAA 811
Query: 602 DARREYEKAMKEYEGGRGD 620
+ Y+K M Y+G D
Sbjct: 812 KDKARYDKEMALYKGKSTD 868
>33187
Length = 644
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +3
Query: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAED 602
DPNAPKR +SA+ + N R K+K+ +P + D++K+ G W + E K++++ AE
Sbjct: 84 DPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAER 263
Query: 603 ARREYEKAMKEYE 615
+ YE+ M EY+
Sbjct: 264 DKARYEREMTEYK 302
>24607
Length = 1354
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = -2
Query: 548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAED 602
+R +AYML+ N+ R K+ ++ PGI +S+ G +W+ +SK++K W RK++
Sbjct: 393 RRAPTAYMLYCNSQRPKVVAESPGIDFAQISRTLGVMWQCLSKKEKMMWRRKSKK 229
>14405
Length = 600
Score = 42.4 bits (98), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = -2
Query: 548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEE 595
+R +AYML+ N+ R K+ ++ PGI +S+ G +W+ +SK+ K +
Sbjct: 254 RRAPTAYMLYCNSQRPKVVAESPGIDFAQISRTLGVMWQCLSKKGKND 111
>21088
Length = 490
Score = 37.0 bits (84), Expect = 0.030, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 38/70 (54%)
Frame = -3
Query: 546 APKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARR 605
A KRPM+A+M++ R ++ + P + +SK G++W+ + ++ + + A+ +
Sbjct: 332 AVKRPMNAFMVFAKMERRQMMAAQPELHNARISKHLGDVWRQCPQPLQDPYKQLAQCLKD 153
Query: 606 EYEKAMKEYE 615
+ + EY+
Sbjct: 152 LHRQEHPEYK 123
>30503
Length = 739
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 37/65 (56%)
Frame = +1
Query: 551 MSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKA 610
++ Y ++L + HP + ++ KK + +S EKK++W +KA +A E+++
Sbjct: 16 LTPYNMFLKSKMPPYLQKHPELPRIEVQKKMKAKYMKLSAEKKKKWIQKAHNAVPEFDEE 195
Query: 611 MKEYE 615
+++Y+
Sbjct: 196 VRQYQ 210
>27304
Length = 512
Score = 32.3 bits (72), Expect = 0.61, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMS 589
KRPM+A+M + R+ + P + +SK G +WK +S
Sbjct: 387 KRPMNAFMAFAQFERKALMQVRPTLHNAVISKHLGSVWKRLS 512
>00223
Length = 1944
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 347 ASSGLLYPLERGFIYVHKPPVHIRFDEISFV 377
A + YPL R F+++ HIR +EISF+
Sbjct: 401 ARVHVFYPLTRVFLFLTNSSPHIRVEEISFI 493
>29687
Length = 434
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 559 NASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEW 596
NA RE S G IT++S++ G W+G KK+ W
Sbjct: 271 NAKREDELSFCKGAIITNVSRQDGGWWRGDYGTKKQHW 158
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|13385624|ref|NP_080390.1| eukaryotic translation
initiation factor 2, subunit 1 alpha [Mus musculus]
(315 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07626 379 e-105
>07626
Length = 1423
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/279 (65%), Positives = 223/279 (79%)
Frame = +1
Query: 4 LSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXNKLI 63
L+CRFY+++FPE++DVVMVNVRSIAEMGAYV LLEYNNIEGM NKLI
Sbjct: 58 LTCRFYKNRFPEIDDVVMVNVRSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLI 237
Query: 64 RIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTK 123
R+GRNECVVVIRVDK+KGYIDLSKRRVS EE +KCE+KF K+K V SILRHVAE+L Y+
Sbjct: 238 RVGRNECVVVIRVDKDKGYIDLSKRRVSAEEVLKCEEKFAKAKAVNSILRHVAELLGYSS 417
Query: 124 DEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRR 183
+LE L+++TAW FD+KYK+PG +Y+AFKHAVS+P +LD ++++ +EVL+ NI R+
Sbjct: 418 SAKLEELYEKTAWYFDEKYKKPG-SSYEAFKHAVSNPEVLDECEIDDQTKEVLLENICRK 594
Query: 184 LTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTETMPIKINLIAPPRYVMTTTTLE 243
L PQ+VKIRADIEVAC YEG+DAVK AL+ GL +TE MPIKINLIAPP YV+TT T+E
Sbjct: 595 LKPQSVKIRADIEVACTKYEGVDAVKRALKKGLEFTTEAMPIKINLIAPPLYVVTTQTME 774
Query: 244 RTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVVTDTD 282
R+EGL VLN+A+ IKE I GVFNVQ P+VV+D D
Sbjct: 775 RSEGLEVLNKAVEAIKEDITGAGGVFNVQEAPRVVSDID 891
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|27369782|ref|NP_766146.1| gem (nuclear organelle)
associated protein 5 [Mus musculus]
(1502 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01598 381 e-105
17880 97 9e-25
10264 99 1e-20
19498 68 3e-11
29912 66 8e-11
03387 50 5e-06
13335 49 1e-05
28359 38 7e-05
16105 45 2e-04
03156 44 5e-04
01805 44 5e-04
01327 44 6e-04
02960 44 7e-04
27475 44 7e-04
19949 43 0.001
01768 42 0.001
00561 42 0.001
12841 40 0.009
27465 40 0.009
12806 38 0.032
30256 38 0.040
12574 37 0.042
13278 37 0.061
03395 37 0.089
15337 36 0.11
20662 36 0.13
30295 36 0.15
26107 35 0.25
17266 35 0.27
02147 35 0.27
02090 35 0.28
04395 34 0.47
19140 34 0.50
17602 33 0.59
01557 33 0.72
20271 33 1.2
15056 32 1.3
17598 32 1.4
14500 32 1.5
31474 32 1.8
31054 32 2.4
07741 32 2.5
25880 31 3.4
06614 31 3.7
06576 31 3.7
26939 31 4.5
11915 31 4.5
10162 30 5.0
15745 30 5.2
30108 30 5.5
11493 30 6.2
00825 30 6.4
14555 30 9.7
32784 30 9.9
>01598
Length = 1545
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/531 (39%), Positives = 307/531 (57%), Gaps = 13/531 (2%)
Frame = +1
Query: 198 IHSIAWCPLSGEDCLSISQEENSEEPDIPNGKLIAETPITKGCYLATGSKDQTIRIWSCS 257
+ S++WCP+ GE L SQ D NG E T GC +ATGSKD+TIR+W+ S
Sbjct: 1 VMSVSWCPVQGETFLKESQ-------DATNGLTDPERD-TGGCLIATGSKDRTIRVWTLS 156
Query: 258 RGRGVMVLKLPFLKRRSGGVDPTVKERLWLTLHWPKNQPTQLVSSCFGGELLLWDLTQSW 317
+G+ + + KLP +R +G D + ++WL +HW K+ P QLVSS GG+LLLW L +
Sbjct: 157 QGKQIFMKKLPNQRREAG--DTGSRFKVWLAIHWLKSNPEQLVSSSSGGDLLLWSLRYTK 330
Query: 318 RRKYTLFSTSAEGHNHSRIVFNLCSLKTEDGKQLLLSTSMDRDVKCWDMATLECCWTLPS 377
+ Y F TS + H R VFN+C+ + + L + + DR V WD+ T+E ++ +
Sbjct: 331 GQAYQTFQTS-DYRPHMRPVFNICASGPD--SKTLCTFAQDRQVVLWDLETMEAVASMAT 501
Query: 378 LGGFAYSLAFSPVDVGSLAIGVGDGMIRVWNTLSIKNNYDVKNFWQGVKSKVTALCWHPN 437
LGG Y + SP+D G +A+GVGD MIR WN + N YDV WQG+KSKVTA+ WHP
Sbjct: 502 LGGHVYCVRTSPIDPGRVAVGVGDSMIRTWNMSNKTNPYDVTTLWQGIKSKVTAVAWHPT 681
Query: 438 KEGCLAFGTDDGKVGLYDTCSNKPPQISSTYHKKTVYRLAWGPP-VPPMSLGGEGDRPSL 496
KEG L FGTDDG++G++D S+K P +S+T+H +T Y + WGP + P D S
Sbjct: 682 KEGWLGFGTDDGRIGVFDVLSHKMPTLSNTFHHRTAYVVCWGPASLSPT------DGKSF 843
Query: 497 TLYSCGGEGVVLQHNPWKLS-----GEAFDINKLVRDTNSIRYKLPVHTEISWKGDGKVL 551
+LYS G+ +L+H+ LS A DI + + NS + K TE+SW D
Sbjct: 844 SLYSV-GDCKILEHSSAVLSRGEKKANAIDITQKIGAVNSDQVKGLKATELSWSPDQNAA 1020
Query: 552 ALGNEDGSIEIFQVPNLRLLCTIQQHHKLVNAIVWHHEHGSRPELSC----LLASGSNNA 607
A+G ++GS+ + + +L+++ I+ KL+N + WH + LA+ N+
Sbjct: 1021AVGTDEGSVYVVTIQDLKIVAAIRTQQKLINCVRWHPRLTDQSPAGSPCCHWLAAAGNDQ 1200
Query: 608 VIYVHNLKAVL---ESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGRLVSACYDGTA 664
VI+V +L +V E + E+ + +T R LSGH+ ++T ++WSPHHD RLVS YD A
Sbjct: 1201VIHVVDLASVFAEREGDKETSLILTS-LRELSGHSQRVTDMSWSPHHDARLVSVGYDAEA 1377
Query: 665 QVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCVYRWLTSMQ 715
VWD + L F+GH GRLL +S +DP+ + +G D V+ W S Q
Sbjct: 1378FVWDVQKGTALAQFKGHMGRLLTCQFSGLDPDLVMTGGSDASVHVWRVSQQ 1530
Score = 36.6 bits (83), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Frame = +1
Query: 63 HTERVSGFT---FSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSP 119
++++V G S P Q N A +D+G+V V ++ +V Q I+ + W P
Sbjct: 955 NSDQVKGLKATELSWSPDQ-NAAAVGTDEGSVYVVTIQDLKIVAAIRTQQKLINCVRWHP 1131
Query: 120 TVKD-----------LIVSGDEKGV-------VFCYWLNRNDSQHLFTEPR-------TI 154
+ D L +G+++ + VF ++ + T R +
Sbjct: 1132 RLTDQSPAGSPCCHWLAAAGNDQVIHVVDLASVFAEREGDKETSLILTSLRELSGHSQRV 1311
Query: 155 FCLTCSPHHE-NLVAIGYKDGIVVIIDISKKGEVIHRLRGHDDEIHSIAWCPLSGED 210
++ SPHH+ LV++GY D + D+ +KG + + +GH + + C SG D
Sbjct: 1312 TDMSWSPHHDARLVSVGY-DAEAFVWDV-QKGTALAQFKGHMGRLLT---CQFSGLD 1467
>17880
Length = 480
Score = 96.7 bits (239), Expect(2) = 9e-25, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 66/107 (61%)
Frame = -2
Query: 952 APVAGYSVWLWAVEAFAKQLCFQDQYVKAASYLLSIHKVYEAVELLKSNHLYREAIAVAK 1011
AP+A Y W E ++KQL QY KA SYLL HK+Y A++L + + LYREA+A+A
Sbjct: 323 APLASYETWEVVCEEYSKQLEEDGQYHKAVSYLLVSHKLYPAIDLFRRHKLYREAVALAH 144
Query: 1012 ARLRPEDPVLKELYLSWGSILERDGHYAIAAKCYLGATSAYDAAKVL 1058
RL DPV +++Y W L RDG Y AAKCYL +AAKV+
Sbjct: 143 VRLSLRDPVWEDIYTEWSEQLMRDGAYEQAAKCYLAMRRIQEAAKVI 3
Score = 37.0 bits (84), Expect(2) = 9e-25, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 24/29 (82%)
Frame = -3
Query: 923 QLMLWKGDLKGVLQAAAERGELTDSLVAV 951
Q+ LWKG++ GV+Q A +RG+L+D +V++
Sbjct: 409 QMELWKGNITGVIQLARQRGQLSDWIVSL 323
>10264
Length = 416
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 8/124 (6%)
Frame = -1
Query: 600 LASGSNNAVIYVHNLKAVL--------ESNPESPITITEPYRTLSGHTAKITSLAWSPHH 651
LA+ N+ VI+V +L +V E + E+ + +T R LSGH+ ++T ++WSPHH
Sbjct: 383 LAAAGNDQVIHVVDLASVFGEMGATEREGDKETLLILTS-LRELSGHSQRVTDMSWSPHH 207
Query: 652 DGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCVYRWL 711
D RLVS YD A VWD + L F+GH GRLL +S +DP+ + +G D V+ W
Sbjct: 206 DARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSGLDPDLVMTGGSDASVHVWR 27
Query: 712 TSMQ 715
S Q
Sbjct: 26 VSQQ 15
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -1
Query: 59 ELVGHTERVSGFTFS-HHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHW 117
EL GH++RV+ ++S HH + + D VWDV+ T + + H + +
Sbjct: 260 ELSGHSQRVTDMSWSPHHDARL---VSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQF 90
Query: 118 SPTVKDLIVSGDEKGVVFCYWLNRN 142
S DL+++G V + +++
Sbjct: 89 SGLDPDLVMTGGSDASVHVWRVSQQ 15
>19498
Length = 903
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Frame = -1
Query: 569 RLLCTIQQHHKLVNAIVWHHEHGSRPELSCLLASGSNNAVIYVHNLKAVLESNPE--SPI 626
R+LC + H VN + W E+G LASG ++ +I + + S S +
Sbjct: 813 RVLCQMDSHLGCVNCVRWS-ENGK------FLASGGDDKLIMIWQISRGFGSGKSFGSNV 655
Query: 627 TITEPYR---TLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALR-EEPLFNFRGHR 682
TI E +R TL GH + LAWSP D L S D T VW+AL+ E + RGH
Sbjct: 654 TILEHWRSVATLRGHAGDVLDLAWSPQ-DLWLASCSVDNTIVVWNALKFSEQVAVIRGHA 478
Query: 683 GRLLCVAWSPVDPECIYSGADDFCVYRWLTS 713
G + V W PV + S +DD + W TS
Sbjct: 477 GMVKGVTWDPVG-RYLASQSDDKTLRVWRTS 388
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 31/133 (23%)
Frame = -1
Query: 156 CLTCSPHHEN--LVAIGYKDGIVVIIDISK----------------KGEVIHRLRGHDDE 197
C+ C EN +A G D +++I IS+ + LRGH +
Sbjct: 780 CVNCVRWSENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHWRSVATLRGHAGD 601
Query: 198 IHSIAWCP-------LSGEDCLSI-SQEENSEEPDIPNG-----KLIAETPITKGCYLAT 244
+ +AW P S ++ + + + + SE+ + G K + P+ G YLA+
Sbjct: 600 VLDLAWSPQDLWLASCSVDNTIVVWNALKFSEQVAVIRGHAGMVKGVTWDPV--GRYLAS 427
Query: 245 GSKDQTIRIWSCS 257
S D+T+R+W S
Sbjct: 426 QSDDKTLRVWRTS 388
>29912
Length = 510
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
Frame = +3
Query: 542 ISWKGDGKVLALGNEDGSIEIFQVPNLRLLCTIQQHHKLVNAIVWHHEHGSRPELSCLLA 601
+SW +G LALG G ++++ V + L T+ H V ++ W+ S +++
Sbjct: 27 VSWIKEGNYLALGTSTGEVQVWDVTQQKKLRTMAGHAARVGSLSWN---------SFIVS 179
Query: 602 SGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGR-LVSACY 660
SGS + I+ H+++ TLSGH+ ++ L WSP DG+ L S
Sbjct: 180 SGSRSGNIHHHDVRVA-----------DHHVGTLSGHSQEVCGLRWSP--DGKYLASGAN 320
Query: 661 DGTAQVWDAL-----REEPLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCV 707
D VW A +PL F H+ + +AW P P + SG D +
Sbjct: 321 DNLLCVWPAQVTGGNSTQPLHTFSQHQAAVKALAWCPWQPSXLASGGGDVLI 476
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = +3
Query: 80 NLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSPTVKDLIVSGDEKGVVFCYWL 139
N A + G V+VWDV + + H + +L W+ + + SG G + + +
Sbjct: 48 NYLALGTSTGEVQVWDVTQQKKLRTMAGHAARVGSLSWNSFI---VSSGSRSGNIHHHDV 218
Query: 140 NRNDSQHLFT---EPRTIFCLTCSPHHENLVAIGYKDGIVVIIDISKKG----EVIHRLR 192
D H+ T + + L SP + L A G D ++ + G + +H
Sbjct: 219 RVAD-HHVGTLSGHSQEVCGLRWSPDGKYL-ASGANDNLLCVWPAQVTGGNSTQPLHTFS 392
Query: 193 GHDDEIHSIAWCP 205
H + ++AWCP
Sbjct: 393 QHQAAVKALAWCP 431
>03387
Length = 1891
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Frame = +1
Query: 60 LVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKT----VVTEHTL---HQHTI 112
L GH + G+ S +P ++SDD T+ +WD+ + VV HT+ H +
Sbjct: 349 LKGHQKE--GYGLSWNPNLNGHLLSASDDHTICLWDINSTQRESRVVDAHTIFTGHTSVV 522
Query: 113 SALHWSPTVKDLI--VSGDEKGVVFCYWLNRNDSQHLFTEPRT--IFCLTCSPHHENLVA 168
+ W + L V+ D+K +++ N + T + CL+ +P+ E ++A
Sbjct: 523 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHVVDAHTAEVNCLSFNPYSEFILA 702
Query: 169 IGYKDGIVVIIDISKKGEVIHRLRGHDDEIHSIAWCP 205
G D V + D+ +H H DEI + W P
Sbjct: 703 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 813
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 101/264 (38%), Gaps = 19/264 (7%)
Frame = +1
Query: 423 QGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYDTCSNKPPQISSTYHKKTVYRLAWGPPV 482
+G + + L W+PN G L +DD + L+D I+ST + V
Sbjct: 352 KGHQKEGYGLSWNPNLNGHLLSASDDHTICLWD--------INSTQRESRVVD------- 486
Query: 483 PPMSLGGEGDRPSLTLYSCGGEGVVLQHNPWKLSGEAF------DINKLVRDTNSIRYKL 536
+ T+++ G V++ W L E+ D ++ DT S
Sbjct: 487 ------------AHTIFT--GHTSVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSK 624
Query: 537 PVHTEISWKGDGK----------VLALGNEDGSIEIFQVPNLRL-LCTIQQHHKLVNAIV 585
P H + + +LA G+ D ++ ++ + NL+L L + + H + +
Sbjct: 625 PSHVVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 804
Query: 586 WHHEHGSRPELSCLLASGSNNAVIYVHNLKAVLESNPESPITITEPYRTL--SGHTAKIT 643
W P +LAS + ++V +L + E P GHTAKI+
Sbjct: 805 W------SPHNETILASSGTDRRLHVWDLSKIGEEQLPEDAEDGPPELLFIHGGHTAKIS 966
Query: 644 SLAWSPHHDGRLVSACYDGTAQVW 667
+W+P+ + S D QVW
Sbjct: 967 DFSWNPNEPWIVCSVSEDNIMQVW 1038
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Frame = +1
Query: 577 HHKLVNAIVWHHEHGSRPELSCLLASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLS 636
H +V + WH H S L S +++ + + + ++ T ++P +
Sbjct: 508 HTSVVEDVAWHLLHES------LFGSVADDQKLMIWDTRSN---------TTSKPSHVVD 642
Query: 637 GHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALR--EEPLFNFRGHRGRLLCVAWSPVD 694
HTA++ L+++P+ + L + D T +WD LR + L +F H+ + V WSP +
Sbjct: 643 AHTAEVNCLSFNPYSEFILATGSADKTVALWD-LRNLKLKLHSFESHKDEIFQVQWSPHN 819
Query: 695 PECIYSGADDFCVYRW 710
+ S D ++ W
Sbjct: 820 ETILASSGTDRRLHVW 867
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Frame = +1
Query: 594 PELSCLLASGSNNAVIYVHNLKAVLESNPESPITITE--PYRTLSGHTAKITSLAWSPHH 651
P+ C++A+ + ++ + V + +P P E P L GH + L+W+P+
Sbjct: 232 PQNPCIIATKTPSSDVLVFDYT----KHPSKPDPSGECIPELRLKGHQKEGYGLSWNPNL 399
Query: 652 DGRLVSACYDGTAQVWD---ALREEPLFN----FRGHRGRLLCVAWSPVDPECIYSGADD 704
+G L+SA D T +WD RE + + F GH + VAW + S ADD
Sbjct: 400 NGHLLSASDDHTICLWDINSTQRESRVVDAHTIFTGHTSVVEDVAWHLLHESLFGSVADD 579
Query: 705 FCVYRWLTSMQDHSRP 720
+ W T S+P
Sbjct: 580 QKLMIWDTRSNTTSKP 627
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 14/132 (10%)
Frame = +1
Query: 593 RPELSCLLASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHD 652
P +LA+GS + + + +L+ + + H +I + WSPH++
Sbjct: 676 NPYSEFILATGSADKTVALWDLR-----------NLKLKLHSFESHKDEIFQVQWSPHNE 822
Query: 653 GRLVSACYDGTAQVWDALR--------------EEPLFNFRGHRGRLLCVAWSPVDPECI 698
L S+ D VWD + E LF GH ++ +W+P +P +
Sbjct: 823 TILASSGTDRRLHVWDLSKIGEEQLPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIV 1002
Query: 699 YSGADDFCVYRW 710
S ++D + W
Sbjct: 1003CSVSEDNIMQVW 1038
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 23/218 (10%)
Frame = +1
Query: 289 LHWPKNQPTQLVSSCFGGELLLWDLTQSWRRK-----YTLFSTSAEGHNHSRIVFNLCSL 343
L W N L+S+ + LWD+ + R +T+F+ H+ +V ++
Sbjct: 379 LSWNPNLNGHLLSASDDHTICLWDINSTQRESRVVDAHTIFT------GHTSVVEDVAWH 540
Query: 344 KTEDGKQLLLSTSMDRDVKCWDMATLECCWTLPSLGGFAYS-----LAFSPVDVGSLAIG 398
+ L S + D+ + WD T + PS A++ L+F+P LA G
Sbjct: 541 LLHES--LFGSVADDQKLMIWD--TRSNTTSKPSHVVDAHTAEVNCLSFNPYSEFILATG 708
Query: 399 VGDGMIRVWNTLSIKNNYDVKNFWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYD--- 455
D + +W+ ++K + +F + K ++ + W P+ E LA D ++ ++D
Sbjct: 709 SADKTVALWDLRNLK--LKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 879
Query: 456 --------TCSNKPPQISSTY--HKKTVYRLAWGPPVP 483
+ PP++ + H + +W P P
Sbjct: 880 IGEEQLPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 993
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Frame = +1
Query: 382 AYSLAFSPVDVGSLAIGVGDGMIRVWNTLSIKNN---YDVKNFWQGVKSKVTALCWHPNK 438
Y L+++P G L D I +W+ S + D + G S V + WH
Sbjct: 370 GYGLSWNPNLNGHLLSASDDHTICLWDINSTQRESRVVDAHTIFTGHTSVVEDVAWHLLH 549
Query: 439 EGCLAFGTDDGKVGLYDTCSN---KPPQISSTYHKKTVYRLAWGPPVPPMSLGGEGDR 493
E DD K+ ++DT SN KP + H V L++ P + G D+
Sbjct: 550 ESLFGSVADDQKLMIWDTRSNTTSKPSHVVDA-HTAEVNCLSFNPYSEFILATGSADK 720
>13335
Length = 863
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 108/285 (37%), Gaps = 9/285 (3%)
Frame = +1
Query: 91 VKVWDVETKTVVTEHTLHQH----TISALHWSPTVKDLIVSGDEKGVVFCYW--LNRNDS 144
V VWDV+T ++ E+ QH +I +SP+ L+ D+ + C W +
Sbjct: 4 VIVWDVKTGSIKGEY---QHASKSSIRVCKFSPSSSHLVSGSDDDTI--CMWEVATQKLV 168
Query: 145 QHLFTEPRTIFCLTCSPHHENLVAIGYKDGIVVIIDISKKGEVIH---RLRGHDDEIHSI 201
+ ++ L SP+ LV+ G +G + + D S G H R+ HD +
Sbjct: 169 RSYVGHEDSVMALAYSPNGHYLVS-GSPNGDLYVWDASF-GHCRHLTLRVDAHDLGVTCC 342
Query: 202 AWCPLSGEDCLSISQEENSEEPDIPNGKLIAETPITKGCYLATGSKDQTIRIWSCSRGRG 261
+ P G C AE T LATG KD I++W+ S G
Sbjct: 343 EFSPTFGTAC--------------------AENSSTCNLLLATGGKDNLIKLWTFSAQVG 462
Query: 262 VMVLKLPFLKRRSGGVDPTVKERLWLTLHWPKNQPTQLVSSCFGGELLLWDLTQSWRRKY 321
+ L SG D + L S F + LWD +
Sbjct: 463 SPEVTLQCRDILSGHSDLVMACAF-------SPSSALLASGSFDKSVRLWDSV----KGV 609
Query: 322 TLFSTSAEGHNHSRIVFNLCSLKTEDGKQLLLSTSMDRDVKCWDM 366
LFS A HSR V C + DG LL S SMDR +K W +
Sbjct: 610 ALFSIEA---CHSRFV--TCCAFSIDG-TLLASGSMDRIIKIWKL 726
>28359
Length = 444
Score = 37.7 bits (86), Expect(2) = 7e-05, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -3
Query: 156 CLTCSPHHENLVAIGYKDGIVVIIDISKKGEVIHR 190
CL+CSPH VA+G K G+V ++D++ +G+ R
Sbjct: 208 CLSCSPHIPLNVAVGTKQGVVFVLDLNNQGKFCIR 104
Score = 28.1 bits (61), Expect(2) = 7e-05, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 16/20 (80%)
Frame = -2
Query: 186 EVIHRLRGHDDEIHSIAWCP 205
++++++RG DD+ ++WCP
Sbjct: 119 KILYKIRGQDDDGCDVSWCP 60
>16105
Length = 960
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Frame = -2
Query: 76 PGQYNLCATSSDDGTVKVWDVETKTVVTEHT-------LHQHTISALHWSPTVKDLIVSG 128
P N+ A++SDD TVKVW + +VT T HQ + W P+ ++++VS
Sbjct: 545 PHNDNVIASASDDCTVKVWQIPDSGLVTNLTDPVVDLVGHQKRCCLIVWHPSAQNVLVSA 366
Query: 129 DEKGVVFCYWLNRNDSQHLFTEPRTIFCLTCSPHHENLVAIGYKDGIVVIIDISKKGEVI 188
+ + + + P I+C++ + + LV KD + IID S G V+
Sbjct: 365 GADNKILFWNVGTGEPMLEVDVPDMIYCMSFNFNGSRLVCT-CKDKKLRIID-SHSGAVL 192
Query: 189 HRLRGHD 195
+ HD
Sbjct: 191 KEGKCHD 171
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Frame = -2
Query: 635 LSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALRE-------EPLFNFRGHRGRLLC 687
++GH + + W PH+D + SA D T +VW +P+ + GH+ R
Sbjct: 587 VAGHKGAVLDIQWCPHNDNVIASASDDCTVKVWQIPDSGLVTNLTDPVVDLVGHQKRCCL 408
Query: 688 VAWSPVDPECIYSGADDFCVYRW 710
+ W P + S D + W
Sbjct: 407 IVWHPSAQNVLVSAGADNKILFW 339
Score = 36.6 bits (83), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 15/109 (13%)
Frame = -2
Query: 594 PELSCLLASGSNNAVIYVHNLKAVLESNPESPIT--ITEPYRTLSGHTAKITSLAWSPHH 651
P ++AS S++ + V + P+S + +T+P L GH + + W P
Sbjct: 545 PHNDNVIASASDDCTVKVWQI-------PDSGLVTNLTDPVVDLVGHQKRCCLIVWHPSA 387
Query: 652 DGRLVSACYDGTAQVWDALREEPL-------------FNFRGHRGRLLC 687
LVSA D W+ EP+ FNF G RL+C
Sbjct: 386 QNVLVSAGADNKILFWNVGTGEPMLEVDVPDMIYCMSFNFNG--SRLVC 246
>03156
Length = 1014
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 16/165 (9%)
Frame = +1
Query: 57 VGELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALH 116
+ + +GH V+ H L + S D TV++WDVET + ++ + Q+ ++ +
Sbjct: 160 IRDFIGHDMVVTAI---HLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVK 330
Query: 117 WSPTVKDLIVSGDEKGVVFCYWLNRNDSQHL-----FTEPRTI-----------FCLTCS 160
W P +I +G++K V DS+ L FT+ + I FCLTCS
Sbjct: 331 WLPGSHLIIQAGEDKEVRI------YDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCS 492
Query: 161 PHHENLVAIGYKDGIVVIIDISKKGEVIHRLRGHDDEIHSIAWCP 205
G + +S G + + +GH + I + + P
Sbjct: 493 N------GFGGNGCEATLWQLS-DGSIQNEFKGHREAIEACLFLP 606
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Frame = +1
Query: 181 ISKKGEVIHRLRGHDDEIHSIAW---C----PLSGEDCLSISQEENSEEPDIPNGKLIAE 233
+SK G + R GHD EI + + C S + + + Q NS G +
Sbjct: 13 LSKMGRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHSIRDFIGHDMVV 192
Query: 234 TPI---TKGCYLATGSKDQTIRIW-----SCSRGRGV---MVLKLPFL------------ 270
T I T L +GS+D T+RIW +C R + +V + +L
Sbjct: 193 TAIHLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVKWLPGSHLIIQAGED 372
Query: 271 ------KRRSGGVDPTVKERLWLTLHWPKNQPTQLVSSC---FGG---ELLLWDLTQSWR 318
R+ G+ + ++ ++ + Q +C FGG E LW L+
Sbjct: 373 KEVRIYDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGCEATLWQLSDG-- 546
Query: 319 RKYTLFSTSAEGHNHSRIVFNLCSLKTEDGKQLLLSTSMDRDVKCWDMATLECCW--TLP 376
S E H + L + L+ + S D V+ W+M T EC
Sbjct: 547 ------SIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNMFTKECVCEQNFE 708
Query: 377 SLGGFAYSLAF--SPVDVGSLAIGV 399
G +A+ V VG+ +GV
Sbjct: 709 GTGPLTSMIAYGDGSVLVGTFNLGV 783
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 56 VVGELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTL 107
+ E GH E + F L AT+S D +V+VW++ TK V E
Sbjct: 550 IQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNMFTKECVCEQNF 705
>01805
Length = 2124
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -1
Query: 633 RTLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSP 692
+++GHT + L+W+ + L SA D T +WD + NF H + C W P
Sbjct: 594 ESVTGHTQAVLDLSWNRNARHVLASASADTTVALWDLSEGKMAMNFTQHSREVQCCNWHP 415
Query: 693 VDPECIYSGADDFCV 707
+ + + +G+ D V
Sbjct: 414 QEEQTLLTGSFDNTV 370
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 1/171 (0%)
Frame = -1
Query: 541 EISWKGDGK-VLALGNEDGSIEIFQVPNLRLLCTIQQHHKLVNAIVWHHEHGSRPELSCL 599
++SW + + VLA + D ++ ++ + ++ QH + V WH P+
Sbjct: 561 DLSWNRNARHVLASASADTTVALWDLSEGKMAMNFTQHSREVQCCNWH------PQEEQT 400
Query: 600 LASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGRLVSAC 659
L +GS + + V + + S T + + T+ G K W+ H+ +L++
Sbjct: 399 LLTGSFDNTVKVVDCR--------SAETCHKSW-TVEGEVEKA---VWNHHNPLQLLACT 256
Query: 660 YDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCVYRW 710
G +D E+P+F+ H + V S P + + ++D + W
Sbjct: 255 DKGMVYCFDIRHEKPVFSVGAHSSCVTGVCLSSQIPGLMITTSEDKTMKVW 103
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%)
Frame = -1
Query: 287 LTLHWPKNQPTQLVSSCFGGELLLWDLTQSWRRKYTLFSTSAEGHNHSRIVFNLCSLKTE 346
L L W +N L S+ + LWDL++ K + T HSR V C+ +
Sbjct: 564 LDLSWNRNARHVLASASADTTVALWDLSEG---KMAMNFTQ-----HSREV-QCCNWHPQ 412
Query: 347 DGKQLLLSTSMDRDVKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVGDGMIRV 406
+ +Q LL+ S D VK D + E C ++ G ++ + L GM+
Sbjct: 411 E-EQTLLTGSFDNTVKVVDCRSAETCHKSWTVEGEVEKAVWNHHNPLQLLACTDKGMVYC 235
Query: 407 WNTLSIKNNYDVKNFWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYDTCSNKPPQISS 466
++ K + V S VT +C G + ++D + ++D +KP + S
Sbjct: 234 FDIRHEKPVFSVG----AHSSCVTGVCLSSQIPGLMITTSEDKTMKVWDIQDDKPTHVFS 67
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = -1
Query: 60 LVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSP 119
+ GHT+ V +++ + ++ A++S D TV +WD+ + T H + +W P
Sbjct: 588 VTGHTQAVLDLSWNRNA--RHVLASASADTTVALWDLSEGKMAMNFTQHSREVQCCNWHP 415
Query: 120 TVKDLIVSGDEKGVV 134
+ +++G V
Sbjct: 414 QEEQTLLTGSFDNTV 370
>01327
Length = 2215
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 16/165 (9%)
Frame = +3
Query: 57 VGELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALH 116
+ + +GH V+ H L + S D TV++WDVET + ++ + Q+ ++ +
Sbjct: 270 IRDFIGHDMVVTAI---HLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVK 440
Query: 117 WSPTVKDLIVSGDEKGVVFCYWLNRNDSQHL-----FTEPRTI-----------FCLTCS 160
W P +I +G++K V DS+ L FT+ + I FCLTCS
Sbjct: 441 WLPGSHLIIQAGEDKEVRI------YDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCS 602
Query: 161 PHHENLVAIGYKDGIVVIIDISKKGEVIHRLRGHDDEIHSIAWCP 205
G + +S G + + +GH + I + + P
Sbjct: 603 N------GFGGNGCEATLWQLS-DGSIQNEFKGHREAIEACLFLP 716
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 97/276 (35%), Gaps = 46/276 (16%)
Frame = +3
Query: 170 GYKDGIVVIIDISKKGEVIHRLRGHDDEIHSIAW---C----PLSGEDCLSISQEENSEE 222
G KD VV+ D + G + R GHD EI + + C S + + + Q NS
Sbjct: 93 GSKDKSVVLYDY-QNGRLEDRWTGHDREITKVCYGASCNGMFSASRDKTIKMWQRGNSHS 269
Query: 223 PDIPNGKLIAETPI---TKGCYLATGSKDQTIRIWSCSRGRGVMVLKLP----------- 268
G + T I T L +GS+D T+RIW G + +P
Sbjct: 270 IRDFIGHDMVVTAIHLNTDNTLLCSGSRDNTVRIWDVETGACLRQNNIPQNLVTDVKWLP 449
Query: 269 ---------------FLKRRSGGVDPTVKERLWLTLHWPKNQPTQLVSSC---FGG---E 307
R+ G+ + ++ ++ + Q +C FGG E
Sbjct: 450 GSHLIIQAGEDKEVRIYDSRTLGIVRSFTKKQYIQMSCDVTADGQFCLTCSNGFGGNGCE 629
Query: 308 LLLWDLTQSWRRKYTLFSTSAEGHNHSRIVFNLCSLKTEDGKQLLLSTSMDRDVKCWDMA 367
LW L+ S E H + L + L+ + S D V+ W+M
Sbjct: 630 ATLWQLSDG--------SIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNMF 785
Query: 368 TLECCW--TLPSLGGFAYSLAF--SPVDVGSLAIGV 399
T EC G +A+ V VG+ +GV
Sbjct: 786 TKECVCEQNFEGTGPLTSMIAYGDGSVLVGTFNLGV 893
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 56 VVGELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTL 107
+ E GH E + F L AT+S D +V+VW++ TK V E
Sbjct: 660 IQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVRVWNMFTKECVCEQNF 815
>02960
Length = 1577
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 635 LSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALR-EEPLFNFRGHRGRLLCVAWSPV 693
+ HT +T + WSP + +S YD ++WD + L++ H R+L V WS
Sbjct: 1202 FTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHEDRILAVDWSI- 1378
Query: 694 DPECIYSGADD 704
PE + SG D
Sbjct: 1379 -PELLLSGGVD 1408
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +2
Query: 630 EPYRTLSGHTAKITSLAWSPHHDGR----LVSACYDGTAQVWDALRE----EPLFNFRGH 681
E T+ GHT+ + +AW H + V+ +D TA VW RE + + RGH
Sbjct: 575 EAIMTIPGHTSPVKCVAWIKHDESSGVSTFVTGSHDQTALVWQWQRETNEVDCRLSCRGH 754
Query: 682 RGRLLCVAWSPVDPECIYSGADDFCVYRWLT 712
+ CVA SP D + + +G+ D + W T
Sbjct: 755 AASVDCVAVSP-DSQQMCTGSWDKMLKLWST 844
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%)
Frame = +2
Query: 352 LLSTSMDRDVKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVGDGMIRVWNTLS 411
++++S D ++ WD+ T + +L +A+SP+ L G D +R+ +
Sbjct: 1001 VVTSSWDHSLRLWDLHTAQQT-SLIQGSKAVLDVAYSPLS-HMLITGSADRHVRLVDP-R 1171
Query: 412 IKNNYDVKNFWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYDTCSNKPPQISSTYHKK 471
VK + VT + W P +E G+ D + L+DT S K +H+
Sbjct: 1172 CSEGETVKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHED 1351
Query: 472 TVYRLAWGPPVPPMSLGGEGDRPSLTLYSCGGEG 505
+ + W P +S GG ++ + YS G
Sbjct: 1352 RILAVDWSIPELLLS-GGVDNKLHVFSYSSAKLG 1450
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 631 PYRTLSGHTAKITSLAW-SPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVA 689
P TLSGH ++++ W PH R+V++ +D + ++WD + +G + +L VA
Sbjct: 935 PVLTLSGHAEAVSAVRWLDPH---RVVTSSWDHSLRLWDLHTAQQTSLIQGSKA-VLDVA 1102
Query: 690 WSPVDPECIYSGAD 703
+SP+ I AD
Sbjct: 1103 YSPLSHMLITGSAD 1144
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 651 HDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAW 690
H G +S YD T ++W + + E + GH + CVAW
Sbjct: 512 HTGXXLSGSYDNTVRLW-STKGEAIMTIPGHTSPVKCVAW 628
>27475
Length = 369
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 635 LSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALR-EEPLFNFRGHRGRLLCVAWSPV 693
+ HT +T + WSP + +S YD ++WD + L++ H R+L V WS
Sbjct: 56 FTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHEDRILAVDWSI- 232
Query: 694 DPECIYSGADD 704
PE + SG D
Sbjct: 233 -PELLLSGGVD 262
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +2
Query: 429 VTALCWHPNKEGCLAFGTDDGKVGLYDTCSNKPPQISSTYHKKTVYRLAWGPPVPPMSLG 488
VT + W P +E G+ D + L+DT S K +H+ + + W +P + L
Sbjct: 77 VTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHEDRILAVDWS--IPELLLS 250
Query: 489 GEGDR 493
G D
Sbjct: 251 GGVDN 265
>19949
Length = 903
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%)
Frame = +2
Query: 354 STSMDRDVKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVGDGMIRVWNTLSIK 413
S SMD +VK WD+ C +T G L FSP D +A DG++++W+ + K
Sbjct: 44 SGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSP-DGRWIASASEDGLVKLWDLTAGK 220
Query: 414 NNYDVKNFWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYD 455
D+K + V + +HP+ E LA G+ D V +D
Sbjct: 221 LLTDLKLH----RDAVNTIEFHPH-EFLLASGSADRTVKFWD 331
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +2
Query: 642 ITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSG 701
+ SL + P+ S D ++WD R+ ++ ++GH G + C+ +SP D I S
Sbjct: 2 VKSLDFHPY-GAYTASGSMDCNVKLWDIRRKGCIYTYKGHTGCVCCLRFSP-DGRWIASA 175
Query: 702 ADDFCVYRW 710
++D V W
Sbjct: 176 SEDGLVKLW 202
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 547 DGKVLALGNEDGSIEIFQVPNLRLLCTIQQHHKLVNAIVWH-HEHGSRPELSCLLASGSN 605
DG+ +A +EDG ++++ + +LL ++ H VN I +H HE LLASGS
Sbjct: 152 DGRWIASASEDGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHPHEF--------LLASGSA 307
Query: 606 NAVIYVHNLKAVLESNPESPITITEP 631
+ + +L+ I+ TEP
Sbjct: 308 DRTVKFWDLETF------QLISTTEP 367
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 62 GHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSP 119
GHT V FS G++ A++S+DG VK+WD+ ++T+ LH+ ++ + + P
Sbjct: 113 GHTGCVCCLRFSPD-GRW--IASASEDGLVKLWDLTAGKLLTDLKLHRDAVNTIEFHP 277
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%)
Frame = +2
Query: 55 RVVGELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISA 114
+++ +L H + V+ F HP ++ L A+ S D TVK WD+ET +++ ++I +
Sbjct: 218 KLLTDLKLHRDAVNTIEF--HPHEF-LLASGSADRTVKFWDLETFQLISTTEPEANSIRS 388
Query: 115 LHWSP 119
+ + P
Sbjct: 389 ILFHP 403
>01768
Length = 1424
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 20/189 (10%)
Frame = +3
Query: 541 EISWK-GDGKVLALGNEDGSIEIF---QVPNLRLLCTI-QQHHKLVNAIVWHHEHGSRPE 595
++ W +G V A + D ++ I+ Q P+ + T+ + H + +N I W+ P
Sbjct: 852 DVQWSPNEGNVFASCSVDRTLRIWNTQQKPSKANVLTVPEAHSRDINVINWN------PI 1013
Query: 596 LSCLLASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGRL 655
LLASG ++ +I + +L+ P++ ++ H+ +TSL W+P L
Sbjct: 1014 EKHLLASGGDDGIIKIWDLRMFRNK----PVSAQASFKL---HSQPVTSLEWNPQDSSVL 1172
Query: 656 VSACYDGTAQVWDALRE--------------EPLFNFRGHRGRLLCVAWSPVDPECIYSG 701
++ D +WD E + LF G + + V W P P + S
Sbjct: 1173 AASGEDDQITIWDFSVERDEGEGEEELDVPAQLLFQHCG-QTDIKEVHWHPQLPGVLIST 1349
Query: 702 A-DDFCVYR 709
A DF ++R
Sbjct: 1350 AKSDFNIFR 1376
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 385 LAFSPVDVGSLAIGVGDGMIRVWNTLSIKNNYDVKNFWQGVKSKVTALCWHPNKEGCLAF 444
+ +SP + A D +R+WNT + +V + + + W+P ++ LA
Sbjct: 855 VQWSPNEGNVFASCSVDRTLRIWNTQQKPSKANVLTVPEAHSRDINVINWNPIEKHLLAS 1034
Query: 445 GTDDGKVGLYD--TCSNKP--PQISSTYHKKTVYRLAWGP-PVPPMSLGGEGDRPSLTLY 499
G DDG + ++D NKP Q S H + V L W P ++ GE D+ ++ +
Sbjct: 1035GGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPVTSLEWNPQDSSVLAASGEDDQITIWDF 1214
Query: 500 SC 501
S
Sbjct: 1215SV 1220
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 88/256 (34%), Gaps = 27/256 (10%)
Frame = +3
Query: 86 SDDGTVKVWDVETKTVVTE----------------HTLHQHTIS--ALHWSPTVKDLIVS 127
SD G+V V+D+ +T + + HT+ HT A+ WSP K +V+
Sbjct: 576 SDKGSVYVYDITXQTAIVDDAEAAGKYDSTQKSIVHTVTHHTTEGFAIDWSPAAKGWLVT 755
Query: 128 GDEKGVVFCY------WLNRNDSQHLFTEPRTIFCLTCSPHHENLVAIGYKDGIVVIIDI 181
GD G ++ W S T+ ++ + SP+ N+ A D + I +
Sbjct: 756 GDCTGAIYISQPSSSGWTTEKSSYAAHTD--SVEDVQWSPNEGNVFASCSVDRTLRIWNT 929
Query: 182 SK---KGEVIHRLRGHDDEIHSIAWCPLSGEDCLSISQEENSEEPDIPNGKLIAETPITK 238
+ K V+ H +I+ I W P+
Sbjct: 930 QQKPSKANVLTVPEAHSRDINVINWNPIEKH----------------------------- 1022
Query: 239 GCYLATGSKDQTIRIWSCSRGRGVMVLKLPFLKRRSGGVDPTVKERLWLTLHWPKNQPTQ 298
LA+G D I+IW R V K S V +L W +
Sbjct: 1023--LLASGGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPV---------TSLEWNPQDSSV 1169
Query: 299 LVSSCFGGELLLWDLT 314
L +S ++ +WD +
Sbjct: 1170LAASGEDDQITIWDFS 1217
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +3
Query: 350 QLLLSTSMDRDVKCWDMA---TLECCWTLPSLGGFAYS-LAFSPVDVGSLAIGVGDGMIR 405
+ S S+DR ++ W+ + T+P + + ++P++ LA G DG+I+
Sbjct: 879 NVFASCSVDRTLRIWNTQQKPSKANVLTVPEAHSRDINVINWNPIEKHLLASGGDDGIIK 1058
Query: 406 VWNTLSIKNN-YDVKNFWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYD 455
+W+ +N + ++ VT+L W+P LA +D ++ ++D
Sbjct: 1059IWDLRMFRNKPVSAQASFKLHSQPVTSLEWNPQDSSVLAASGEDDQITIWD 1211
Score = 32.7 bits (73), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +3
Query: 75 HPGQYNLCATSSDDGTVKVWDV---ETKTVVTEHT--LHQHTISALHWSPTVKDLIVSGD 129
+P + +L A+ DDG +K+WD+ K V + + LH +++L W+P ++ +
Sbjct: 1005 NPIEKHLLASGGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPVTSLEWNPQDSSVLAASG 1184
Query: 130 EKGVVFCY 137
E + +
Sbjct: 1185 EDDQITIW 1208
>00561
Length = 1003
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = -3
Query: 540 TEISWKGDGKVLALGNEDGSIEIFQVPNLRLLCTIQQHHKLVNAIVWHHEHGSRPELSCL 599
+++ DG G+ D ++ ++ + + + H K V ++ + ++
Sbjct: 854 SDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQ------- 696
Query: 600 LASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGRLVSAC 659
+ SGS + I + N A E TI E GHT ++ + +SP+H ++ +C
Sbjct: 695 IVSGSRDKTIKLWNTLA------ECKFTIQE-----DGHTDWVSCVRFSPNHSNPIIVSC 549
Query: 660 -YDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGAD 703
+D T +VW+ + N GH G L V SP C G D
Sbjct: 548 GWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKD 414
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 6/256 (2%)
Frame = -3
Query: 237 TKGCYLATGSKDQTIRIWSCSRGRGVMVLKLPFLKRRSGGVDPTVKERLWLTLHWPKNQP 296
+ G Y +GS DQT+R+W + G+ RR G V L++ + +
Sbjct: 836 SDGNYALSGSWDQTLRLWDLAAGKTT---------RRFEGHTKDV-----LSVAFSADN- 702
Query: 297 TQLVSSCFGGELLLWDLTQSWRRKYTLFSTSAEGHNHSRIVFNLCSLKTEDGKQLLLSTS 356
Q+VS + LW+ + F+ +GH + +++S
Sbjct: 701 RQIVSGSRDKTIKLWNTLAECK-----FTIQEDGHTD---WVSCVRFSPNHSNPIIVSCG 546
Query: 357 MDRDVKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVG-DGMIRVWNTLSIKNN 415
DR VK W++A + G+ ++ SP GSL G D +W+ KN
Sbjct: 545 WDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSP--DGSLCTSGGKDSKALLWDLNDGKNL 372
Query: 416 YDVKNFWQGVKSKVTALCWHPNKEG-CLAFGTDDGKVGLYDTCSNKPPQISSTY----HK 470
Y +++ + ALC+ PN+ C+A+G + ++D KP + H+
Sbjct: 371 YTLEH-----NDIINALCFSPNRYWLCVAYGP---SIKIWDLACKKPSRSCXLRSSRPHQ 216
Query: 471 KTVYRLAWGPPVPPMS 486
+ A P PPM+
Sbjct: 215 RPSSHSACPWPGPPMA 168
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = -3
Query: 292 PKNQPTQLVSSCFGGELLLWDLTQSWRRKYTLFSTSAEGHNH--SRIVFNLCSLKTEDGK 349
PK+ P ++S+ L++W LT+ Y GH+H S +V + DG
Sbjct: 983 PKD-PDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVL------SSDG- 828
Query: 350 QLLLSTSMDRDVKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVGDGMIRVWNT 409
LS S D+ ++ WD+A + S+AFS D + G D I++WNT
Sbjct: 827 NYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFS-ADNRQIVSGSRDKTIKLWNT 651
Query: 410 LS 411
L+
Sbjct: 650 LA 645
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = -3
Query: 62 GHTERVSGFTFSHHPGQYN-LCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSPT 120
GHT+ VS FS P N + + D TVKVW++ + H H ++ + SP
Sbjct: 617 GHTDWVSCVRFS--PNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPD 444
Query: 121 VKDLIVSG--DEKGVVFCYWLNRNDSQHLFT-EPRTIFCLTCSPHHENLVAIGYKDGIVV 177
L SG D K +++ + ND ++L+T E I C + + + Y I +
Sbjct: 443 -GSLCTSGGKDSKALLW----DLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPSIKI 279
>12841
Length = 1364
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 634 TLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPV 693
T SGHTA + + WSP +S D + ++W R P+ F + V WSP
Sbjct: 1033 TYSGHTAPVYHIRWSPFVSDIFLSCSADWSIRLWHQDRTTPILTFHSSTKTVHDVCWSPR 1212
Query: 694 DPE---CIYSGA 702
C++ GA
Sbjct: 1213 SSTVFACVHEGA 1248
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 23/198 (11%)
Frame = +1
Query: 546 GDGKVLALGNEDGSIEIFQV------PNLRLLCTIQQHHKLVNAIVW-HHEHGSRPELSC 598
+ +LA G DG + I+ V P L T +H V I W E GS E +
Sbjct: 586 ANANILAAGYYDGGVAIYNVRSTSDEPILDNQETHGKHLGPVWQIQWIEKERGSGEERAE 765
Query: 599 LLASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGRLVSA 658
+L S S + + +++ ESN + + + + ++G + A+ H G L
Sbjct: 766 VLISISTDGRVTQWSIRKGFESN--NIMRLKKLPTRMAGKAREKKGEAFISRHAGGL--- 930
Query: 659 CYD-----------GTAQVWD-----ALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGA 702
C+D GT + + + E+ L + GH + + WSP + S +
Sbjct: 931 CFDFHSRDLNVYLAGTEEGYIHKCSCSYNEQYLETYSGHTAPVYHIRWSPFVSDIFLSCS 1110
Query: 703 DDFCVYRWLTSMQDHSRP 720
D+ + W QD + P
Sbjct: 1111ADWSIRLW---HQDRTTP 1155
>27465
Length = 658
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = -1
Query: 630 EPYRTLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVA 689
E TL GH + ++A++ ++++ +D T ++W + RGH ++CV+
Sbjct: 262 EELHTLEGHRNVVYAIAFNNPFGDKVITGSFDKTCKLWSTADGKCYHTLRGHTAEIVCVS 83
Query: 690 WSPVDPECIYSGADDFCVYRW 710
++P I +G+ D W
Sbjct: 82 FNP-SSTLIATGSMDTTCRLW 23
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 39/82 (47%)
Frame = -1
Query: 632 YRTLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWS 691
++ L H +T++A++ ++ YD T ++WD E L GHR + +A++
Sbjct: 382 FKVLRAHILPLTNVAFNKS-GSSFITGSYDRTCKIWDTASAEELHTLEGHRNVVYAIAFN 206
Query: 692 PVDPECIYSGADDFCVYRWLTS 713
+ + +G+ D W T+
Sbjct: 205 NPFGDKVITGSFDKTCKLWSTA 140
>12806
Length = 961
Score = 37.7 bits (86), Expect = 0.032, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +3
Query: 62 GHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSPTV 121
HT+ V+ F H + + ++S+D T+KVWD T T+ H+ I+AL S
Sbjct: 414 AHTDWVTCVRF-HQDTKNPIVVSASNDKTIKVWDNHTMTLKNTFVGHKAQITALDMS--- 581
Query: 122 KDLIVSGDEKGVVFCY 137
+ +VSG + G+ +
Sbjct: 582 TNYLVSGSKDGIAMTW 629
>30256
Length = 961
Score = 37.7 bits (86), Expect = 0.040, Method: Composition-based stats.
Identities = 63/255 (24%), Positives = 94/255 (36%), Gaps = 38/255 (14%)
Frame = +3
Query: 239 GCYLATGSKDQTIRIWSCSRGRGVMVLKLPFLKRRSGGVDPTVKERLWLTLHWPKNQPTQ 298
G + +GS D+++++W+ G L G TV+ L+L K
Sbjct: 72 GNTVISGSTDRSLKVWNADTGVCTHTLY---------GHSSTVR---CLSLSGKK----- 200
Query: 299 LVSSCFGGELLLWDLTQSWRRKYTLFSTSAEGHNHSRIVFNLCSLK--TEDGKQLLLSTS 356
+VS L +WD+ GH + ++ ++ +++ DGK+++ S +
Sbjct: 201 VVSGSRDATLRVWDIES--------------GHCLNVLLGHMAAVRCVQYDGKRVV-SGA 335
Query: 357 MDRDVKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVGDGMIRVWNT------- 409
D V+ WD T C TL YSL F V V S G D IRVW+
Sbjct: 336 XDYTVRVWDPDTASCLHTLQGHTNRVYSLQFDGVYVVS---GSLDTSIRVWDVRCGKLVH 506
Query: 410 -----------LSIKNNYDVK-------NFWQGVKSKVTALCWHPNKE----GCLAFG-- 445
L +K+N V W K PNK CL F
Sbjct: 507 TLMGHQSLTSGLELKDNLLVSGNADSTVKVWDVHTGKCLQTLLGPNKHRSAVTCLQFNKK 686
Query: 446 -----TDDGKVGLYD 455
+DDG V L+D
Sbjct: 687 FVVTCSDDGTVKLWD 731
Score = 37.0 bits (84), Expect = 0.059, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Frame = +3
Query: 55 RVVGELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTL-----HQ 109
++V L+GH SG NL + + D TVKVWDV T + TL H+
Sbjct: 495 KLVHTLMGHQSLTSGLELKD-----NLLVSGNADSTVKVWDVHTGKCL--QTLLGPNKHR 653
Query: 110 HTISALHWSPTVKDLIVSGDEKGVVFCYWLNRND-SQHLFTEPR-----TIFCLTCSPHH 163
++ L ++ K +V+ + G V + LN D ++L T P ++ L C+ +
Sbjct: 654 SAVTCLQFN---KKFVVTCSDDGTVKLWDLNTGDFIRNLITLPSGGSGGVVWRLRCN-NT 821
Query: 164 ENLVAIGYKDG 174
+ + A+G ++G
Sbjct: 822 KMVCAVGSRNG 854
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Frame = +3
Query: 587 HHEHGSRPELSCL------LASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTA 640
H +G + CL + SGS +A + V ++++ L GH A
Sbjct: 144 HTLYGHSSTVRCLSLSGKKVVSGSRDATLRVWDIES------------GHCLNVLLGHMA 287
Query: 641 KITSLAWSPHHDG-RLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIY 699
+ + +DG R+VS D T +VWD L +GH R+ + + V +
Sbjct: 288 AVRCV----QYDGKRVVSGAXDYTVRVWDPDTASCLHTLQGHTNRVYSLQFDGV---YVV 446
Query: 700 SGADDFCVYRW 710
SG+ D + W
Sbjct: 447 SGSLDTSIRVW 479
Score = 31.2 bits (69), Expect = 3.5, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 83/223 (37%), Gaps = 23/223 (10%)
Frame = +3
Query: 60 LVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSP 119
L GH+ V + S + S D T++VWD+E+ + H + + +
Sbjct: 150 LYGHSSTVRCLSLSGKK-----VVSGSRDATLRVWDIESGHCLNVLLGHMAAVRCVQYD- 311
Query: 120 TVKDLIVSGDEKGVVFCYWLNRNDSQHLFTEPRTIFCLTCSPHHENLVAIGYKDGIVVI- 178
+VSG V + +P T CL H N V DG+ V+
Sbjct: 312 --GKRVVSGAXDYTVRVW------------DPDTASCLHTLQGHTNRVYSLQFDGVYVVS 449
Query: 179 --IDISKK------GEVIHRLRGHDDEIHSIAWCPLSGEDCLSISQEENSEEP--DIPNG 228
+D S + G+++H L GH L +D L +S +S D+ G
Sbjct: 450 GSLDTSIRVWDVRCGKLVHTLMGHQSLTSG-----LELKDNLLVSGNADSTVKVWDVHTG 614
Query: 229 KLIA--------ETPIT----KGCYLATGSKDQTIRIWSCSRG 259
K + + +T ++ T S D T+++W + G
Sbjct: 615 KCLQTLLGPNKHRSAVTCLQFNKKFVVTCSDDGTVKLWDLNTG 743
>12574
Length = 521
Score = 37.4 bits (85), Expect = 0.042, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +3
Query: 634 TLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPV 693
TL+GHT ++++ +SP+ D L S+ D ++W A + GH+ L VAWS
Sbjct: 171 TLAGHTKALSAVKFSPNGDW-LASSSADKLIKIWGAYDGKFEKTIAGHKLGLSDVAWSS- 344
Query: 694 DPECIYSGADDFCVYRW 710
D + + S +DD + W
Sbjct: 345 DSKLLCSASDDKTLKIW 395
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 633 RTLSGHTAKITSLAWSPHHDGRLV-SACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWS 691
+T++GH ++ +AWS D +L+ SA D T ++W+ + + +GH + C ++
Sbjct: 294 KTIAGHKLGLSDVAWSS--DSKLLCSASDDKTLKIWEFSTGKCMKTLKGHSNYVFCCNFN 467
Query: 692 P 692
P
Sbjct: 468 P 470
Score = 29.6 bits (65), Expect = 9.0, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +3
Query: 324 FSTSAEGHNHSRIVFNLCSLKTEDGKQLLLSTSMDRDVKCWDMATLECCWTLPSLGGFAY 383
F + GH L + +LL S S D+ +K W+ +T +C TL + +
Sbjct: 288 FEKTIAGHK-----LGLSDVAWSSDSKLLCSASDDKTLKIWEFSTGKCMKTLKGHSNYVF 452
Query: 384 SLAFSP 389
F+P
Sbjct: 453 CCNFNP 470
>13278
Length = 870
Score = 37.0 bits (84), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%)
Frame = +1
Query: 75 HPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSPTVKDLIVSGDEKGVV 134
+P + A++S D TV++W+VE + T HQ + ++ +SP K L SG V
Sbjct: 100 NPNTSLILASASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSPDGKYL-ASGSFDKCV 276
Query: 135 FCYWLNRNDSQHLFTEPRTIFCLTCSPHHENLVAIGYKDGIVVIIDISK 183
+ + H + IF + C H + V DG V ++D+ K
Sbjct: 277 HIWNVQTGSLVHSYKGTGGIFEV-CWNHRGDKVGASASDGSVFVLDLRK 420
Score = 33.9 bits (76), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1
Query: 351 LLLSTSMDRDVKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVGDGMIRVWN 408
+L S S D V+ W++ C TL YS+AFSP D LA G D + +WN
Sbjct: 118 ILASASFDSTVRLWEVERGLCLHTLTKHQEPVYSVAFSP-DGKYLASGSFDKCVHIWN 288
>03395
Length = 2795
Score = 36.6 bits (83), Expect = 0.089, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +2
Query: 395 LAIGVGDGMIRVWN----TLSIKNNYDVKNFWQGVKSKVTALCWHPNKEGCLAFGTDDGK 450
L G G+G +RVW+ L+ K D+ + K KVTA+ H N C++ T DG
Sbjct: 41 LVSGGGEGQVRVWDIVKDMLTGKTRGDLVANMKEHKGKVTAIQIHTNDRCCVSAST-DGS 217
Query: 451 VGLYDTCSNKPPQI 464
++D +N QI
Sbjct: 218 TIIWDLITNTRSQI 259
>15337
Length = 860
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = -1
Query: 632 YRTLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWS 691
YR + G T I+ A+SP L DG +V++ E + + + G LLCV WS
Sbjct: 347 YRWVVG-TGAISEFAFSPCSR-YLAVVGQDGHLRVFNYNSMELIGTMKSYFGGLLCVCWS 174
Query: 692 PVDPECIYSGADDFCVYRW 710
P D + I +G +D V W
Sbjct: 173 P-DGKYIVTGGEDDLVTVW 120
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -1
Query: 542 ISWKGDGKVLALGNEDGSIEIFQVPNLRLLCTIQQHHKLVNAIVW 586
+ W DGK + G ED + ++ R++C H VN + +
Sbjct: 185 VCWSPDGKYIVTGGEDDLVTVWSFHEKRVVCRGHGHKSWVNVVAF 51
>20662
Length = 1220
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 10/168 (5%)
Frame = +2
Query: 54 FRVVGELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTIS 113
F ++ H + + + + Y ++S D +KVW+ + ++ T + H +
Sbjct: 356 FSMLSSACEHDDMTASVSINSDXSHY---LSASYDHGIKVWNTDLTSLYT-YRAHSDIVW 523
Query: 114 ALHWSPTVKDLIVSGDEKGVVFCYWLNRNDSQHLFTEPRTIFCLTC---SPHHENLVAIG 170
+ PT L +S + G + + + + + + F TC P+ N+ A+G
Sbjct: 524 DVQCHPTEPALFLSCSQDGKIVLWDVRESKPATCLPKCSSGFKPTCVQWQPNARNMYAVG 703
Query: 171 YKDGIVVIIDISKKGEVIHRLRGHDDEIHSIAWCPLS-------GEDC 211
+ G V + D+ E + H+ + +A+CP GEDC
Sbjct: 704 DEGGHVSVQDLRMVVEKNVSYQSHNRVVTRLAFCPQRPSMLASIGEDC 847
>30295
Length = 593
Score = 35.8 bits (81), Expect = 0.15, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 633 RTLSGHTAKITSLAWSPHHDGR-LVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWS 691
RTL H AKI ++ W+ D R LVSA DG VWD + ++ A++
Sbjct: 227 RTLRXHLAKIYAMHWAT--DSRNLVSASQDGKLIVWDGYTTNKVHAIPLRSSWVMTCAYA 400
Query: 692 PVDPECIYSGADDFCVYRWLTSMQDHSR 719
P G D+ C L + + + R
Sbjct: 401 PSGGYVACGGLDNICSIYSLKTREGNVR 484
>26107
Length = 1338
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 82 CATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSPTVKDLIVSGDEKGVVF 135
C T+S D TV +WDVET T VT H+ ++ ++ P+ SG G +
Sbjct: 1042 CLTASGDQTVALWDVETTTKVTTFIGHKCSVRSVASCPSSPAQCASGARDGHIM 881
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = -3
Query: 637 GHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPE 696
H + +W + D + ++A D T +WD + F GH+ + VA P P
Sbjct: 1093 AHNNAVFDYSWISN-DSQCLTASGDQTVALWDVETTTKVTTFIGHKCSVRSVASCPSSPA 917
Query: 697 CIYSGADDFCVYRW 710
SGA D + W
Sbjct: 916 QCASGARDGHIMLW 875
>17266
Length = 480
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Frame = -1
Query: 542 ISWKGDGKVLALGNEDGSIEIFQVPNLRLLCTIQQHHKLVNAIVWHHEHGSRPELSCLLA 601
+S D + G D S +++ V + T H +NAI + + A
Sbjct: 441 LSLAPDMRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHA-------FA 283
Query: 602 SGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGRLVSACYD 661
+GS++A + +++A E S I ITS+A+S GRL+ YD
Sbjct: 282 TGSDDATCRLFDIRADQEIGMYSHDNII----------CGITSVAFS--KSGRLLLGGYD 139
Query: 662 G-TAQVWDALREEPLFNFRGHRGRLLCVA 689
+WD L++E GH R+ C+
Sbjct: 138 DFNCNIWDVLKQERTGVLAGHDNRVSCLG 52
>02147
Length = 1547
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 76/201 (37%)
Frame = +2
Query: 60 LVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSP 119
GHT + G F + ++SDD TV++W +ET V + T S L SP
Sbjct: 413 FAGHTSNIKGALFLSDGKR---IISASDDKTVRLWSLETCQEVQQLTFDTPPTS-LTLSP 580
Query: 120 TVKDLIVSGDEKGVVFCYWLNRNDSQHLFTEPRTIFCLTCSPHHENLVAIGYKDGIVVII 179
+IV+ + + R + P + L S E G +D +
Sbjct: 581 DKNTIIVTHSQNIAFYQADTLREMKKFEAEAPISSASLHQS---ERFFVAGGEDFKMYKF 751
Query: 180 DISKKGEVIHRLRGHDDEIHSIAWCPLSGEDCLSISQEENSEEPDIPNGKLIAETPITKG 239
D + G+ I +GH +H C+ S P+G+L
Sbjct: 752 DY-ETGKEIESFKGHFGPVH-----------CVRFS----------PDGEL--------- 838
Query: 240 CYLATGSKDQTIRIWSCSRGR 260
A+GS+D T+R+W + GR
Sbjct: 839 --YASGSEDGTLRLWQTTIGR 895
>02090
Length = 1841
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 644 SLAWSPHHDGRL-VSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGA 702
+LA SP DG++ S C DG VWD + + F+GH C+ SP D +++G
Sbjct: 1611 ALAISP--DGKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISP-DGTKLWTGG 1441
Query: 703 DDFCVYRW 710
D V W
Sbjct: 1440 LDNTVRSW 1417
>04395
Length = 1145
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 75 HPGQYNLCATSSDDGTVKVWDV 96
HPGQ ++ AT S DGT+ VWD+
Sbjct: 501 HPGQLHIVATGSQDGTLTVWDL 566
>19140
Length = 573
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 43/103 (41%)
Frame = -3
Query: 59 ELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWS 118
+L GHT+ V + Q C + S DGT+++W + + V +H + AL +
Sbjct: 502 KLKGHTDNVKALVLNRDGTQ---CLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQAN 332
Query: 119 PTVKDLIVSGDEKGVVFCYWLNRNDSQHLFTEPRTIFCLTCSP 161
+ L G + V N ++ + + E + L +P
Sbjct: 331 ESFTTLYSGGRDHQVWATDIKNPDNRELICEEKAPVLKLELTP 203
>17602
Length = 481
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 655 LVSACYDGTAQVWDALREEPLFNFRGHRGRLLCV--AWSPVDPECIYSGADDFCVYRW 710
+++A D T ++WD + + L + GHR C+ +S + I SG++D VY W
Sbjct: 228 ILAATLDNTLKLWDYSKGKCLKTYVGHRNEKYCIFANFSVTGGKWIVSGSEDNMVYIW 401
>01557
Length = 953
Score = 33.5 bits (75), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 20/114 (17%)
Frame = +2
Query: 598 CLLASGSNNAVIYVHNLKAVLESNPESPIT----------------ITEPYRTLSGHTAK 641
CL G ++A N V +S P+ ++ + YR + HT K
Sbjct: 188 CLFLVGDDSAHKAPINQLCVFKSRPQQAVSTCLDNTLNVWDLSGADLCSVYRARAAHTNK 367
Query: 642 ITSLAWSPHHDGRLVSACYDGTAQVWDALREEP----LFNFRGHRGRLLCVAWS 691
+T LA S +L++ G A++WD P L++ + + C W+
Sbjct: 368 LTGLALSATTAAQLITCDRGGCARLWDLRSSSPSSCCLYDNKTNLLSFSCATWA 529
>20271
Length = 567
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = -1
Query: 62 GHTERVSGFTFSHHPGQYNLC---ATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWS 118
GH ++ H GQ + T+S D TVK+W+++ + V + +S + WS
Sbjct: 291 GHQGPITAIDTHHAAGQIDFSPFFLTASFDWTVKLWNIKEQKYVCSFEDNSDYVSDVQWS 112
Query: 119 PTVKDLIVSGDEKGVVFCYWLNR 141
PT L D G + + LN
Sbjct: 111 PTNPALFSCVDIMGRLDLWHLNH 43
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Frame = -1
Query: 599 LLASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGRL--- 655
L+ +NN ++ S S I E Y GH IT++ + H G++
Sbjct: 396 FLSGDANNFIVGSEECLVYSASRHGSKAGINEAYE---GHQGPITAID-THHAAGQIDFS 229
Query: 656 ---VSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDP 695
++A +D T ++W+ ++ + +F + + V WSP +P
Sbjct: 228 PFFLTASFDWTVKLWNIKEQKYVCSFEDNSDYVSDVQWSPTNP 100
>15056
Length = 445
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 18/69 (26%)
Frame = -2
Query: 86 SDDGTVKVWDVETKTVVTE----------------HTLHQHTIS--ALHWSPTVKDLIVS 127
SD G+V V+D+ +T + + HT+ HT A+ WSP K +V+
Sbjct: 282 SDKGSVYVYDITXQTXIVDDAEAAGKYDSTQKSIVHTVTHHTTEGFAIDWSPAAKGWLVT 103
Query: 128 GDEKGVVFC 136
GD G ++
Sbjct: 102 GDCTGAIYI 76
>17598
Length = 875
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 5/214 (2%)
Frame = +1
Query: 241 YLATGSKDQTIRIWSCSRGRGVMVLKLPFLKRRSGGVDPTVKERLWLTLHWPKNQPTQLV 300
Y+ + S D T+R+W +G RR ++ L + P N+ Q+
Sbjct: 163 YVLSSSWDATLRLWDIKKGNTT---------RR---FISHTRDALAVAFS-PDNR--QIA 297
Query: 301 SSCFGGELLLWDLTQSWRRKYTLFSTSAEGHNHSRIVFNLCSLKTEDGKQ-LLLSTSMDR 359
S L +W+ + F+ A H + C +D K L++S SMD+
Sbjct: 298 SGGRDKALKIWNTVGECK-----FTVDANSHQD----WVTCVKFHQDAKSPLVVSASMDK 450
Query: 360 DVKCWDMATLECCWTLPSLGGFAYSLAFSPVDVG----SLAIGVGDGMIRVWNTLSIKNN 415
+K WD T+ T + + +D+ LA G DG++ WN I+N
Sbjct: 451 TIKVWDNQTMTLKHTF-----VGHKTQINAIDLALKTYYLASGSKDGIVMTWN---IQNG 606
Query: 416 YDVKNFWQGVKSKVTALCWHPNKEGCLAFGTDDG 449
+ +V A+ + PNK L GT +G
Sbjct: 607 TFLGKI--DCDCEVNAVKFSPNKY-WLFVGTSEG 699
Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1
Query: 63 HTERVSGFTFSHHPGQYNLCATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSPTVK 122
H + V+ F H + L ++S D T+KVWD +T T+ H+ I+A+ +
Sbjct: 373 HQDWVTCVKF-HQDAKSPLVVSASMDKTIKVWDNQTMTLKHTFVGHKTQINAIDLALKTY 549
Query: 123 DLIVSGDEKGVVFCY 137
L SG + G+V +
Sbjct: 550 YL-ASGSKDGIVMTW 591
>14500
Length = 1238
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Frame = +3
Query: 599 LLASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGRLVSA 658
LLASG A ++H +N S T +++ +L WS H L+S+
Sbjct: 246 LLASGGGTADRHIHFWNCNTGTNLSSVDT-----------KSQVCALLWSKEHR-ELISS 389
Query: 659 CYDGTAQ----VWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCVYRW--LT 712
G AQ +W + GH R+L +A SP D E + S A D + W T
Sbjct: 390 --HGFAQNQLIIWKYPAMSRVAELTGHTARVLHMAMSP-DGETVVSAAADETLRLWKCFT 560
Query: 713 SMQDHSRPPQ 722
++ RP Q
Sbjct: 561 VDKEKKRPKQ 590
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +2
Query: 634 TLSGHTAKITSLAWSPHHDGR-LVSACYDGTAQVWDAL-----REEPLFNFRGHRGRLLC 687
TLSGH+ ++ L WSP DG+ L S D VW A +PL F H+ +
Sbjct: 44 TLSGHSQEVCGLRWSP--DGKYLASGANDNLLCVWPAQVTGGNSTQPLHTFSQHQAAVKA 217
Query: 688 VA 689
+A
Sbjct: 218 LA 223
>31474
Length = 403
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 2/131 (1%)
Frame = -3
Query: 563 FQVPNLRLLCTIQQHHKLVNAIVWHHEHGSRPELSCLLASGSNNAVIYVHNLKAVLESNP 622
+ L +C + H + + W+ LLAS ++ +I + + N
Sbjct: 350 MAMATLEEVCCLSAHDEHAWCVAWN-------PTGTLLASCGSDKIIKIWGKEG---DNW 201
Query: 623 ESPITITEPYRTLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWD--ALREEPLFNFRG 680
T+T+ HT + SL WSP + L SA +D T VW E + G
Sbjct: 200 VCKSTLTDA------HTRTVRSLGWSPCGN-YLSSASFDATTAVWSRKGGEFECIATLEG 42
Query: 681 HRGRLLCVAWS 691
H + VAW+
Sbjct: 41 HENEVKAVAWA 9
>31054
Length = 392
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -2
Query: 633 RTLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWD 668
+ LSGH A I +LA + DG LVS +GT +WD
Sbjct: 307 QNLSGHNAIINTLA--VNSDGVLVSGADNGTMHLWD 206
>07741
Length = 2119
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Frame = +1
Query: 634 TLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVW-----------DALREEPLFNFRGHR 682
TL H + +AW+ +H + D ++W D+L +PLF+F +
Sbjct: 226 TLDSHNMAVYKVAWNHYHPKIYATCSADWNVKIWENGGKPTDTGXDSLSRKPLFSFDLNN 405
Query: 683 GRLLCVAWSPVDPECIYSGADD--FCVY 708
+ VAW+P + D CVY
Sbjct: 406 S-VGDVAWAPYSSTVFAAVTADGKVCVY 486
>25880
Length = 423
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 185 GEVIHRLRGHDDEIHSIAWCPLSGEDCLSISQEE-----NSEEPDIPNGKLIAETPITKG 239
G IH + H + S+A+ S E+ ++ S E+ N E+PD T K
Sbjct: 29 GAEIHSFQ-HKHIVKSVAFDN-SSENIVTGSNEKLVRVFNLEQPDAEPELYGGHTGAIKR 202
Query: 240 CYLATGSKDQTIRIWSCSRGR 260
A+GS+D T+R+W + G+
Sbjct: 203 ALYASGSEDGTLRLWQTTVGK 265
>06614
Length = 936
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -2
Query: 880 EDVSADLEERFHL----GLFTDRATLYRMMETEGKGHLESGHP 918
ED LEE HL L TD R+ EG+GHLESGHP
Sbjct: 905 EDTHVPLEE-VHLVAGPALLTD----ARVRLAEGQGHLESGHP 792
>06576
Length = 1547
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = -2
Query: 381 FAYSLAFSPVDVGSLAIGVGDGMIRVWNTLSIKNNYDVKNFWQGVKSKVTA----LCWHP 436
F S+ FSP + + D RVW K+ D + + + V ++TA +CWH
Sbjct: 1078 FVNSVTFSPTEEDQVXSTGDDLTCRVWTG---KDGQDGR-YGESVIFRLTAPGMAVCWHA 911
Query: 437 NKEGCLAFGTDDGKVGLYDTCSNKPPQIS 465
++ L G DG + + + SN+ P +S
Sbjct: 910 DEPLKLMVGQKDGIIRFF-SLSNQQPIMS 827
>26939
Length = 388
Score = 30.8 bits (68), Expect = 4.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 84 TSSDDGTVKVWDVETKTVVTEHTLHQHTISAL 115
++SDD T++VWD+ K + HQH +++
Sbjct: 17 SASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 112
>11915
Length = 737
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +1
Query: 83 ATSSDDGTVKVWDVETKTVVTEHTLHQHTISALHWSPTVKDLIVSGDEKGVVFCYWLNRN 142
AT G +K+W+ ET ++ E H+ T+ LH++ ++S G V + +
Sbjct: 454 ATGHVSGRIKLWNCETGKLLIEMMDHKATVHDLHFAADNSLCLMSASHDGTVKLWEFDDQ 633
Query: 143 DSQHLFTEPRT 153
+++ RT
Sbjct: 634 GDCNMYLTLRT 666
>10162
Length = 1629
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 638 HTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPV--DP 695
H + L WS L +AC DG +VWDA GH R C+ V D
Sbjct: 639 HPEGVCKLQWSSS-TALLYTACLDGVMRVWDARSGASKAVLTGH-ARNSCILDFDVTRDG 812
Query: 696 ECIYSGADD 704
C+ SG++D
Sbjct: 813 TCLVSGSED 839
>15745
Length = 1183
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 3/144 (2%)
Frame = +2
Query: 572 CTIQQHHKLVNAIVWHHEHGSRPELSCLLASGSNNAVIYVHNLKAVL-ESNPESPITITE 630
C + V I+WH +G + V+ V + ++ + N S
Sbjct: 410 CHLHSSDHDVKGILWH-------------PTGDSQTVLGVCEDRVIMWDLNVASSSAQQT 550
Query: 631 PYRTLSGH-TAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHRGRLL-CV 688
TL G ++T W+PHH+ ++ + T + WD ++ + G G+L+ +
Sbjct: 551 DMITLEGKGQPRLTCGRWNPHHNCAQIATANEATIRGWDLRSKQQTYQMEGAHGQLVRDL 730
Query: 689 AWSPVDPECIYSGADDFCVYRWLT 712
++P + S DD V W T
Sbjct: 731 DFNPNRQYYLASCGDDCRVKFWDT 802
>30108
Length = 1032
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 40/105 (38%)
Frame = +1
Query: 351 LLLSTSMDRDVKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVGDGMIRVWNTL 410
LL ++ +D V W + E C L LGG SL D + + RVW+T
Sbjct: 424 LLSASPVDTAVMAWSVGG-EACTALRYLGGGGVSLLACSPDGSKVMAATPATLFRVWDTT 600
Query: 411 SIKNNYDVKNFWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYD 455
S W + + T+ CW + DG+V ++
Sbjct: 601 SWHC-----EVWSQLSGRCTSACW-----------SHDGQVXVFS 687
>11493
Length = 535
Score = 30.4 bits (67), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -2
Query: 644 SLAWSPHHDGRL-VSACYDGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGA 702
+LA SP D ++ S C DG VWD E + F+GH C+ SP D +++G
Sbjct: 192 ALAISP--DSKVCFSCCSDGNIAVWDLHNEILVRQFQGHTDGASCIDISP-DGSRLWTGG 22
Query: 703 DDFCV 707
D V
Sbjct: 21 LDNTV 7
>00825
Length = 1821
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%)
Frame = -2
Query: 554 GNEDGSIEIFQVPNLRLLCTIQQHHKLVNAIVWHHEHGSRPELSCLLASGSNNAVIYVHN 613
G DG + + +P ++ C +Q H +V+ + H + SC GS+ +
Sbjct: 1817 GACDGELICWNLPKQQMACRVQAHDGIVHGMAAHS--SGQYFFSC----GSDKTI----- 1671
Query: 614 LKAVLESNPESPITITEPYRTLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREE 673
+PE I EP TL TSL HH + VWD R E
Sbjct: 1670 --KQWSLDPEGTIA-PEPVNTLLAKCI-YTSL---DHHWKDDIFVTSGSRVDVWDEKRSE 1512
Query: 674 PLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCV 707
P+ +F + V ++PV+ + + A D +
Sbjct: 1511 PMRSFSWGVESVHHVKFNPVETYLLGAAAHDRSI 1410
>14555
Length = 627
Score = 29.6 bits (65), Expect = 9.7, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 661 DGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCVYRW 710
D T VWDAL+ GH R+ C+ SP D + +G+ D+ + W
Sbjct: 403 DYTVNVWDALKGMRSTILYGHDNRVSCLRISP-DGTSLCTGSWDYTLRIW 257
>32784
Length = 523
Score = 29.6 bits (65), Expect = 9.9, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 340 LCSLKTEDGKQLLLSTSMDRDVKCWDMATLECCWTLPSLG 379
LCS K E L + T ++R + CW T CWT S G
Sbjct: 122 LCSQKMEG---LTILTKINRTLHCWMTKTTTLCWTWLSSG 12
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|7106389|ref|NP_036099.1| proteasome (prosome,
macropain) subunit, alpha type 7 [Mus musculus]
(248 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
24591 376 e-105
02448 376 e-105
00789 155 2e-38
20771 153 8e-38
14551 145 2e-35
17033 138 2e-33
04255 85 1e-23
19133 91 3e-19
28971 72 3e-13
11023 39 0.002
37174 33 0.11
09721 30 1.2
09881 29 1.7
10729 28 4.3
>24591
Length = 1801
Score = 376 bits (966), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/218 (80%), Positives = 200/218 (91%)
Frame = +1
Query: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKI 62
YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRG ++VVLGVEKK+VAKLQ+ERTVRKI
Sbjct: 40 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGDNLVVLGVEKKAVAKLQEERTVRKI 219
Query: 63 CALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSN 122
LD++V +AFAGLTADARI+INRAR+ECQSH+LTVEDPVTVEYITR+IA LKQ+YTQSN
Sbjct: 220 ALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQKYTQSN 399
Query: 123 GRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIE 182
GRRPFG+S+LI+GFD+DGTP LYQTDPSGTYH WKAN IGR AK+VREFLEK+YTD+
Sbjct: 400 GRRPFGLSSLIIGFDYDGTPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHYTDEVAA 579
Query: 183 TDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKIL 220
+D TIKL +KALLEVVQSG KN+E+AVMRR Q L++L
Sbjct: 580 SDKETIKLALKALLEVVQSGAKNMEVAVMRRGQALQML 693
>02448
Length = 1302
Score = 376 bits (965), Expect = e-105, Method: Compositional matrix adjust.
Identities = 174/218 (79%), Positives = 200/218 (91%)
Frame = +2
Query: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKI 62
YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRG ++VVLGVEKK+VAKLQ+ERTVRKI
Sbjct: 263 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGNNLVVLGVEKKAVAKLQEERTVRKI 442
Query: 63 CALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSN 122
LD++V +AFAGLTADARI+INRAR+ECQSH+LTVEDPVTVEYITR+IA LKQ+YTQSN
Sbjct: 443 ALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQKYTQSN 622
Query: 123 GRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIE 182
GRRPFG+S+LI+GFD+DG+P LYQTDPSGTYH WKAN IGR AK+VREFLEK+YTD+
Sbjct: 623 GRRPFGLSSLIIGFDYDGSPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHYTDEVAA 802
Query: 183 TDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKIL 220
+D TIKL +KALLEVVQSG KN+E+AVMRR Q L++L
Sbjct: 803 SDKETIKLALKALLEVVQSGAKNMEVAVMRRGQALQML 916
>00789
Length = 1584
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Frame = +1
Query: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTV-RK 61
YD T+FSP+G L+QVEYA EA+ T +G+ KD +VL E+++ KL DE + K
Sbjct: 34 YDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILAKDGIVLAAERRNTNKLLDEVSYSEK 213
Query: 62 ICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQS 121
I L D++ + AG+T+DA ++ N R+ Q + L ++P+ E + + +KQ YTQ
Sbjct: 214 IYRLSDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQVVATLCDIKQAYTQF 393
Query: 122 NGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAI 181
G+RPFG+S L +G+D +LYQ+DPSG Y WKA IG + + L++ Y +D
Sbjct: 394 GGKRPFGVSILYMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSANAVSLLKQEYKEDES 573
Query: 182 ETDD---LTIKLVIKALLEVVQSGGKNIELAVMRR 213
D+ L+IK++ K L++ + +E+A + R
Sbjct: 574 SLDEALALSIKVLGKT-LDLTKLTPDKVEMATLTR 675
>20771
Length = 674
Score = 153 bits (386), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 117/179 (65%), Gaps = 5/179 (2%)
Frame = +2
Query: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKI 62
YDR + FSP+G LFQVEYA EA+K GSTA+G++ + VVL VEK+ + L + ++ KI
Sbjct: 101 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTNEGVVLAVEKRVTSSLIEPTSIEKI 280
Query: 63 CALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSN 122
+D ++ A +GL AD+R +I+RARVE Q+H T + ++VE +T+ +++L + +
Sbjct: 281 MEVDKHIGCAMSGLIADSRTLIDRARVEAQNHWFTYNENMSVESVTQAVSNLALAFGDDD 460
Query: 123 G-----RRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNY 176
RPFG++ LI G D +G PRL+ DPSGT+ + A AIG G++ ++ L++ Y
Sbjct: 461 PDPGAMSRPFGVALLIAGVDSNG-PRLFHMDPSGTFIQYDAKAIGSGSEGAQQALQEQY 634
>14551
Length = 1344
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 127/228 (55%), Gaps = 11/228 (4%)
Frame = +3
Query: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKI 62
Y ++T FSP G L Q+EYA AV G+ +VG++ + VVL EKK + DE ++ K+
Sbjct: 153 YSFSLTTFSPSGKLVQIEYALAAVGAGAPSVGIKATNGVVLATEKKQKSVXYDEHSINKV 332
Query: 63 CALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSN 122
+ N+ + ++G+ D R++ RAR + ++ + + + + +A++ Q +TQS
Sbjct: 333 ETITKNIGIVYSGMGPDYRVLCRRARKLAEQYKRVYNEQIPTAQLVQRVAAVMQEFTQSG 512
Query: 123 GRRPFGISALIVGFDF-DGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT---- 177
G RPFG+S L+ G+D D P LYQ DPSG Y AWKA A+G+ + + FLEK Y+
Sbjct: 513 GVRPFGVSLLMAGWDEDDKKPFLYQCDPSGAYFAWKATAMGKNHINGKTFLEKRYSETLE 692
Query: 178 -DDAIETDDLTIKLVIKALLEVVQSGGKNIELAV-----MRRDQPLKI 219
+DA+ T L +K + Q NIE+ + RR +P +I
Sbjct: 693 LEDAVHTAILALKESFEG-----QMTEDNIEIGICNSSGFRRLEPSEI 821
>17033
Length = 2217
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 120/197 (60%)
Frame = -3
Query: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKI 62
YD + + FSPDG +FQVEYAQ+AV+ TA+G+RGKD VV+GVEK +KL ++ +++
Sbjct: 2149 YDLSASHFSPDGRVFQVEYAQKAVENSGTAIGIRGKDGVVMGVEKLVTSKLYEQGANKRL 1970
Query: 63 CALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSN 122
+D ++ A AGL ADAR ++ RA+ E ++R PV ++Y+T +A YT +
Sbjct: 1969 FNIDRHIGGAVAGLLADARQLMERAKEESSNYRFNYGSPVPLKYLTDRVAGYVHAYTLHS 1790
Query: 123 GRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIE 182
RPFG S ++ +D G P+++ +PSG + AIG+ ++ + +EK ++
Sbjct: 1789 AVRPFGTSMIVASYDAVG-PQMFLVEPSGVSWGYYGCAIGKAKQTAKTEIEK------LK 1631
Query: 183 TDDLTIKLVIKALLEVV 199
DLT++ ++K + ++
Sbjct: 1630 MKDLTMQDLVKEVARII 1580
>04255
Length = 1758
Score = 84.7 bits (208), Expect(2) = 1e-23, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Frame = -2
Query: 52 KLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYI 111
KL D TV + +L + + G+ AD++ + RAR E + T + V+ + + I
Sbjct: 1457 KLLDPTTVTHLYSLTERIGCVMTGMIADSQSQVQRARYEAAKWKYTYGYDIPVDMLCKRI 1278
Query: 112 ASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREF 171
A++ Q YTQS RP G +++G+D + P +Y+TDP+G Y +KA + G F
Sbjct: 1277 ANINQVYTQSAEMRPLGCCMILIGYDDEKGPEVYKTDPAGYYCGFKATSAGSKQLEANGF 1098
Query: 172 LEKNYTDDAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQP 216
LEK T + ++ I L V+ + K +E+ ++ +D P
Sbjct: 1097 LEKKIKKKQDFTYNEAAEIAITCLSTVLSADFKASEVEVGIVTKDNP 957
Score = 42.0 bits (97), Expect(2) = 1e-23, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -3
Query: 10 FSPDGHLFQVEYAQEAVKKGS-TAVGVRGKDIVVLGVEKK 48
SP+G L+QVEYA +A+ +G T+V VRGKD V+ +KK
Sbjct: 1585 LSPEGRLYQVEYAFKAINQGGLTSVAVRGKDSAVIVTQKK 1466
>19133
Length = 692
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Frame = +1
Query: 76 LTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVG 135
LTADAR++ N + EC R + P+ V + I + Q T GRRPFG+ LI G
Sbjct: 1 LTADARLLCNFMQTECLDSRWAYQQPLPVSRLVSAIGNKLQIPTHRYGRRPFGVGLLIAG 180
Query: 136 FDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 195
+D+ G P +YQT PS Y+ KA AIG ++S R +LE++ + D +K ++AL
Sbjct: 181 YDWSG-PHIYQTCPSANYYDCKAMAIGARSQSARTYLERHLDQFPQCSLDELVKHGLRAL 357
Query: 196 LEVVQS----GGKNIELAVMRRDQPLKILN 221
+ + S KN L ++ +D KI +
Sbjct: 358 RDTLPSEVTLSTKNCSLGIVDKDMKFKIYD 447
>28971
Length = 437
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1
Query: 116 QRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEK 174
Q YTQS G RPFG+S LI G+D + P LYQ+DPSG Y AWKA A+G+ A + + FL K
Sbjct: 4 QEYTQSGGVRPFGVSLLICGWDNE-RPYLYQSDPSGAYFAWKATAMGKNAVNGKNFLGK 177
>11023
Length = 1057
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 129 ISALI-VGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEK 174
IS +I +G+D + P +Y+TDP+G Y +KA + G FLEK
Sbjct: 1005 ISGMILIGYDDEKGPEVYKTDPAGYYCGFKATSAGSKQLEANGFLEK 865
>37174
Length = 146
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLG 44
Y R P L Q+EYA AV G+ VG++ + VVLG
Sbjct: 16 YKRVYNEQIPTAQLVQIEYALAAVGAGAPVVGIKATNGVVLG 141
>09721
Length = 919
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 76 LTADARIVINRARVECQSHRLTVEDPVTVEYITRYIAS 113
LTADAR++ N + EC R + P+ V + I +
Sbjct: 919 LTADARLLCNFMQTECLDSRWAYQQPLPVSRLVSAIGN 806
>09881
Length = 600
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 63 CALDDNVCMAFAGLTADARIVINRARVECQSHR---LTVEDPVTVEYI 107
C + C A G +A IV N C R LT EDPVT EY+
Sbjct: 288 CVVAFTACDAEVGASAKQGIVSNVKNTVCNVKRILGLTFEDPVTQEYL 431
>10729
Length = 363
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 33 VGVRGKDIVVLGVEK 47
VGVRG ++VVLGVEK
Sbjct: 319 VGVRGNNLVVLGVEK 363
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|80861454|ref|NP_001031761.1| plasma membrane calcium
ATPase 2 isoform 2 [Mus musculus]
(1198 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12151 251 e-105
06342 241 1e-63
29829 200 3e-51
00499 199 6e-51
21541 142 9e-34
36566 115 7e-26
35407 114 3e-25
08160 65 2e-10
28890 59 1e-08
14773 51 3e-06
04985 48 2e-05
13525 43 0.001
33697 39 0.013
07486 38 0.021
14321 37 0.051
06247 31 3.1
26294 30 6.4
>12151
Length = 880
Score = 251 bits (642), Expect(2) = e-105, Method: Compositional matrix adjust.
Identities = 135/198 (68%), Positives = 151/198 (76%), Gaps = 4/198 (2%)
Frame = +3
Query: 784 KKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVV 843
+KADVGFAMGI+GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSI+KFLQFQLTVNVV
Sbjct: 288 QKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 467
Query: 844 AVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASXXXXXXXXXXXXXXRKPYGRNKPLIS 903
AV VAF GAC DSPLKA+QMLWVNLIMDT AS R+PYGR KPLIS
Sbjct: 468 AVFVAFVGACSIGDSPLKAIQMLWVNLIMDTLASLALATELPSSELLKRRPYGRTKPLIS 647
Query: 904 RTMMKNILGHAVYQLTLIFTLLFVGEKMF----QIDSGRNAPLHSPPSEHYTIIFNTFVM 959
+TM KNILGHA YQ+ +I LLF G K + R P P ++H+TIIFN FVM
Sbjct: 648 KTMWKNILGHAFYQILVILLLLFQGAKAVWDRRWHPTSRETP--RPTNQHFTIIFNAFVM 821
Query: 960 MQLFNEINARKIHGERNV 977
M LFNE+NARKIH +RN+
Sbjct: 822 MTLFNEVNARKIHDQRNI 875
Score = 149 bits (376), Expect(2) = e-105, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 83/98 (84%)
Frame = +1
Query: 688 DNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSS 747
DN+NTAR+IA KCGII PG+D L LEGKEFN+ IR+ +GEI QE++D++WP LRVLARSS
Sbjct: 1 DNVNTARSIASKCGIIQPGDDGLVLEGKEFNQLIRDAEGEISQEKVDEVWPNLRVLARSS 180
Query: 748 PTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKK 785
P DK+ LVK IIDS + R+VVAVTGDGTNDGPALKK
Sbjct: 181 PQDKYILVKHIIDSKVSTSREVVAVTGDGTNDGPALKK 294
>06342
Length = 2428
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 218/739 (29%), Positives = 344/739 (46%), Gaps = 69/739 (9%)
Frame = +2
Query: 208 IVVGDIAQIKYGDLLPADG--LFIQGNDLKIDESSLTGESDQVRKSVDKDP--------- 256
+V GDI ++ GD +PAD L I L+ID++ LTGES V K D P
Sbjct: 5 LVPGDIVEVSVGDKVPADIRILKIHSTTLRIDQAILTGESVSVMKHTDPIPDPRAVNQDK 184
Query: 257 --MLLSGTHVMEGSGRMVVTAVGVNSQTGIIFTLLXXXXXXXXXXXXXXXXXXXXXXMEM 314
+L SGT+V G + +V G+ ++ G I
Sbjct: 185 KNLLFSGTNVAAGKCKGLVIGTGLTTEIGKI----------------------------- 277
Query: 315 QPLKSAEGGDADDKKKANMHKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFTVD 374
+ + ++EK+ LQ KL + + Q+ K + II + + ++
Sbjct: 278 -------------RNEMMDTEQEKTPLQQKLDEFSNQLSK-------VITIICIAVWAIN 397
Query: 375 TFVVNKKPWLTECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNN 434
N +++ + +F I V + V A+PEGLP +T LA ++M K N
Sbjct: 398 IGHFNDPAHGGS----WIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNA 565
Query: 435 LVRHLDACETMGNATAICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPSSINAKTLELLV 494
+VR L + ET+G + ICSDKTGTLTTN+M+V + ++ + +I D + I E+
Sbjct: 566 IVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKLFI----FSQI-DTNQIKTTQFEVTG 730
Query: 495 NAIAINSAYTTKILPPEKEGALPRQVGNKTECGLLGFVLDLRQDYEPVRSQMPE------ 548
+ A + ++ K+ G + C + G D DY ++Q +
Sbjct: 731 STYAPDG----ELYQNGKKVKASDYPGLEELCTICGMCNDSSVDYNEAKTQYEKVGEATE 898
Query: 549 -------EKL---------------------------YKVYT--FNSVRKSMSTVIKMPD 572
EKL K +T F+ RKSMS V +P+
Sbjct: 899 TALTVLAEKLNFYNTDKSSLNKREMGTVCNHVIQDMWRKEFTLEFSRDRKSMS-VFCVPN 1075
Query: 573 E------SFRMYSKGASEIVLKKCCKILSGAGEARVFRPRDRDEMVKKV-IEPMACDGLR 625
+ RM++KGA E +L +C + G + + P ++E++K I D LR
Sbjct: 1076KPTRVPGGARMFAKGAPEGLLDRCTHVRIGNNKVPM-SPAIKNEIMKLTKIYGTGRDTLR 1252
Query: 626 TICVAYRDFPSSPEPDWDNEN-----DILNELTCICVVGIEDPVRPEVPEAIRKCQRAGI 680
+ +A D P E D D E+ + +T + VVG+ DP R EV +I+ C+ AGI
Sbjct: 1253CLALATIDNPPRRE-DMDLEDSRKFIEYETNMTFVGVVGMLDPPREEVMASIKNCRAAGI 1429
Query: 681 TVRMVTGDNINTARAIAIKCGIIHPGEDF--LCLEGKEFNRRIRNEKGEIEQERIDKIWP 738
V ++TGDN TA AI + G+ E+ L G+EF+ E+ E
Sbjct: 1430RVIVITGDNKATAEAICRRIGVFSESENTEGLAYTGREFD--------ELPPEDQRAAVM 1585
Query: 739 KLRVLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTD 798
+ R+ AR P K +V+ + + ++ A+TGDG ND PALKKA++G AMG +GT
Sbjct: 1586RARLFARVEPAHKSKIVEYL-----QAEGEISAMTGDGVNDAPALKKAEIGIAMG-SGTA 1747
Query: 799 VAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDS 858
VAK AS+++L DDNFS+IV AV GR +Y+++ +F+++ ++ N+ V+ F A +
Sbjct: 1748VAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGIPE 1927
Query: 859 PLKAVQMLWVNLIMDTFAS 877
L VQ+LWVNL+ D F +
Sbjct: 1928ALIPVQLLWVNLVTDGFPA 1984
>29829
Length = 465
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/150 (70%), Positives = 118/150 (78%)
Frame = -3
Query: 788 VGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIV 847
+GFAMGI+GTDVAKEASDIILTDDNF+SIVKAV WGRNVYDSI+KFLQFQLTVNVVAV V
Sbjct: 460 LGFAMGISGTDVAKEASDIILTDDNFTSIVKAVXWGRNVYDSIAKFLQFQLTVNVVAVFV 281
Query: 848 AFTGACITQDSPLKAVQMLWVNLIMDTFASXXXXXXXXXXXXXXRKPYGRNKPLISRTMM 907
AF GAC DSPL+A+QMLWVNLIMDT AS RKPYGR KPLIS+TM
Sbjct: 280 AFVGACSIGDSPLEAIQMLWVNLIMDTLASLALATELPSNELLKRKPYGRTKPLISKTMF 101
Query: 908 KNILGHAVYQLTLIFTLLFVGEKMFQIDSG 937
KNI GH+VYQ+ +I +LF G +F ID G
Sbjct: 100 KNIAGHSVYQIIIILVILFKGADLFGIDDG 11
>00499
Length = 4026
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 180/572 (31%), Positives = 269/572 (47%), Gaps = 49/572 (8%)
Frame = +2
Query: 413 GLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQAYV- 471
GL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMTV +
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 181
Query: 472 ------------GDVHYKEIPDPSSINAKTLELLVNAIAINSAY-TTKILPPEKEGALPR 518
+ Y DP+ + + +L N IL E G
Sbjct: 182 GRIVEADTSDDQSNATYSR-SDPTWMALSRVAMLCNRAEFKGNQDNVPILKRECNGDASE 358
Query: 519 QVGNKTECGLLGFVLDLRQDYEPVRSQMPEEKLYKVYTFNSVRKSMSTVIKM--PDE-SF 575
K +G V + R+ E + ++P FNS K ++ + PD+ +
Sbjct: 359 SALLKCVELSIGHVTEYRRRNEKI-VEIP---------FNSSNKYQVSIHETEDPDDPRY 508
Query: 576 RMYSKGASEIVLKKCCKILSGAGEARVFRPRDRDEMVKKVIEPMACDGLRTICVAYRD-- 633
+ KGA E ++ +C IL E +P D + + GL + + D
Sbjct: 509 LLVMKGAPERIMDRCSTILLNGKE----QPLDDNFREAFNAAYLELGGLGERVLGFCDYF 676
Query: 634 -----FPSSPEPDWDNENDILNELTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGD 688
FP E D + N + L + ++ + DP R VP+A+ KC+ AGI V MVTGD
Sbjct: 677 LPVDQFPPGYEFDPEGPNFPITGLRFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 856
Query: 689 NINTARAIAIKCGIIHPG----EDFLCLEG---KEFNRRIRN----EKGEIEQERIDKIW 737
+ TA+AIA GII G ED G +E + R G++ +I
Sbjct: 857 HPITAKAIARGVGIISEGSKTVEDIASERGIPVEEVDPREAKAAVIHGGDLRDMTPAQID 1036
Query: 738 PKLR-----VLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAM 792
LR V AR+SP K +V+G Q Q+VAVTGDG ND PALKKAD+G AM
Sbjct: 1037EILRNHSEIVFARTSPQQKLIIVEGC-----QRQGQIVAVTGDGVNDSPALKKADIGVAM 1201
Query: 793 GIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNV--VAVIVAFT 850
GIAG+DV+K+A+D+IL DDNF+SIV V GR ++D++ K + + LT N+ ++ + F
Sbjct: 1202GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLLFI 1381
Query: 851 GACITQDSPLKAVQMLWVNLIMDTFASXXXXXXXXXXXXXXRKPYGRNKPLISRTMMKNI 910
A I PL + +L ++L D + R+P P+ + + + +
Sbjct: 1382LADIPL--PLGTITILCIDLGTDMVPAISLAYEKAENDIMKRQP---RDPVKDKLVNERL 1546
Query: 911 LGHAVYQLTLI------FT-LLFVGEKMFQID 935
+ A Q+ +I FT + +GE F D
Sbjct: 1547ISMAYGQIGMIQASAGFFTYFVIMGENGFWYD 1642
>21541
Length = 445
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 84/122 (68%)
Frame = +3
Query: 168 TAFNDWSKEKQFRGLQSRIEQEQKFTVVRAGQVVQIPVAEIVVGDIAQIKYGDLLPADGL 227
TAFNDWSKEKQFRGLQS+IE E +FTV+R G++ QIPV EI+VG+I QIKYGDLLPADG+
Sbjct: 54 TAFNDWSKEKQFRGLQSKIEHEHRFTVIRNGELHQIPVGEILVGEICQIKYGDLLPADGV 233
Query: 228 FIQGNDLKIDESSLTGESDQVRKSVDKDPMLLSGTHVMEGSGRMVVTAVGVNSQTGIIFT 287
IQ NDLK + K + P G +MVVTAVGVNSQTGIIF
Sbjct: 234 IIQSNDLKNRREFVNRRVGPCEKGRGQGPHAFVRHPCNGGQWKMVVTAVGVNSQTGIIFA 413
Query: 288 LL 289
LL
Sbjct: 414 LL 419
>36566
Length = 589
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 93/147 (63%)
Frame = +3
Query: 769 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 828
VV +TGDG ND ALK A++G +MG++GTDV+KEASD+IL DD+F++I+ A+ G+ ++
Sbjct: 126 VVGMTGDGVNDAVALKSAEIGISMGVSGTDVSKEASDMILVDDDFTTILNAIEEGKGIFY 305
Query: 829 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASXXXXXXXXXXX 888
+I F++FQL+ ++ A+ + + +PL A+Q+LW+N+IMD +
Sbjct: 306 NIRNFVRFQLSTSIAALSLIAVSTLLRLPNPLNAMQILWINIIMDGPPAQSLGVEPVDHD 485
Query: 889 XXXRKPYGRNKPLISRTMMKNILGHAV 915
+ P P+I+R ++ N+L A+
Sbjct: 486 VIKQPPRHVGDPIITRRLIINVLSSAL 566
>35407
Length = 562
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Frame = +1
Query: 57 CRRLKTSPVEGLPGTAPDL--EKRKQIFGQNFIPPKKPKTFLQLVWEALQDVTXXXXXXX 114
++LKTSP EGL G DL E+R + +G N IPPK PK+FL+LVWEALQDVT
Sbjct: 85 VQKLKTSPTEGLVG---DLGKEERVRFYGSNVIPPKPPKSFLRLVWEALQDVTLLILIVA 255
Query: 115 XXXXXXXXFYHPPGESNEGCXXXXXXXXXXXXXXXXX-XXXXXILLSVICVVLVTAFNDW 173
FY E +E IL++V VVLVTAFNDW
Sbjct: 256 AIISLGLSFYKGDEEEDETEDESYRAKADSSLEEKVGWIDGLAILVAVAVVVLVTAFNDW 435
Query: 174 SKEKQFRGLQSRIEQEQKFTVVRAGQVVQIPVAEIVVGDIAQ 215
SKEKQFRGLQS+IE E +FTV+R G++ QIPV +I+VG+I Q
Sbjct: 436 SKEKQFRGLQSKIEHEHRFTVIRDGELHQIPVGDILVGEICQ 561
Score = 30.0 bits (66), Expect = 6.1, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 29 EELRSLMELRGTEAVVKIKETYGDTEAICRRLKTSPVEG 67
+ELR LME R EA I YG +C+ K P++
Sbjct: 2 QELRELMEHRSHEAYNIIATKYGGVLEMCKS*KRHPLKA 118
>08160
Length = 459
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +2
Query: 413 GLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQAY 470
GL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGTLT NRMTV +
Sbjct: 2 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMW 175
>28890
Length = 552
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Frame = -3
Query: 190 QKFTVVRAGQVVQIPVAEIVVGDIAQIKYGDLLPADGLFIQGNDLKIDESSLTGESDQVR 249
Q VVR Q + + E+VVGDI + K+GD +PAD I + K+D SSLTGES+
Sbjct: 475 QFAVVVRGDQKLSVKAEELVVGDIVECKFGDRVPADLRVISAHGFKVDNSSLTGESEPQS 296
Query: 250 KSVD---KDPM-----LLSGTHVMEGSGRMVVTAVGVNSQTGIIFTL 288
+S + ++P+ T+ +EG+ R +V G ++ G I L
Sbjct: 295 RSAEFTHENPLETRNICFFSTNAVEGTCRGIVIKTGDDTVMGRIANL 155
>14773
Length = 794
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Frame = +2
Query: 797 TDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQ 856
+DV+K+A+D+IL DDNF+SIV V GR ++D++ K + + LT N+ +
Sbjct: 2 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLVYILFGT 181
Query: 857 DSPLKAVQMLWVNLIMD 873
PL + +L+++L D
Sbjct: 182 PLPLGVITILFIDLGTD 232
>04985
Length = 1671
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 16/288 (5%)
Frame = -1
Query: 731 ERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGF 790
E + K+ + V AR +P K L++ + + +V + GDG ND ALK A G
Sbjct: 1641 ELLPKVCTQGTVFARMAPDQKCALIENLQSYDY-----IVGMCGDGANDCEALKAAHAGI 1477
Query: 791 AMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNV---------YDSISKFLQFQLTVN 841
++ A VA + I +N +V A+ GR Y ++ F+QF
Sbjct: 1476 SLSEAEASVAAPFTSRI---NNIECVVTAMREGRAALVTSFGCFKYMALYSFIQF----- 1321
Query: 842 VVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASXXXXXXXXXXXXXXRKPYGRNKPL 901
++V++ +T C T S L + L+++LI+ T R+KP
Sbjct: 1320 -ISVLILYT--CQTNLSDL---EFLYIDLIITT------TIAVLLGYTGAYDKLVRHKPP 1177
Query: 902 ISRTMMKNILG-------HAVYQLTLIFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIF 954
S + NI+ A YQL+ TL ++ ++F + + + TIIF
Sbjct: 1176 DSLMKLSNIISILMQVTLTAAYQLS---TLFYLRSQLFYQNQEVDPLRDETDAWESTIIF 1006
Query: 955 NTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIV 1002
T M + ++ K FR PI+ + F + I+++
Sbjct: 1005 LTSTFMYVSVAVSFSK--------GPPFRKPIYTNV---PFLVSIIVL 895
>13525
Length = 645
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 425 SVKKMMKDNNLVRHLDACETMGNATAICSDKTG 457
+ K+M + N LV++L+A ET+G+ + ICSDKTG
Sbjct: 5 TAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 103
>33697
Length = 310
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -2
Query: 662 DPVRPEVPEAIRKCQRAGITVRMVTGDNINTARA 695
DP R VP+A+ KC+ AGI V MVTGD+ T++
Sbjct: 195 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITSQG 94
>07486
Length = 763
Score = 38.1 bits (87), Expect = 0.021, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 782 ALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGR 824
AL +ADVG A+G GTDVA EA+DI+L + + A+ R
Sbjct: 742 ALAQADVGIAIG-TGTDVAVEAADIVLMKSDLVDVYAAIKLSR 617
>14321
Length = 568
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +2
Query: 736 IWPKLRVLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAM 792
+ P RV AR +P K ++ + Q V + GDGTND ALK ADVG A+
Sbjct: 248 LLPNTRVFARVAPKQKELII-----TVLKAQGFVTLMCGDGTNDVGALKHADVGVAL 403
>06247
Length = 458
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 988 CTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIGLGELV 1031
C+ V G ++ I V GG+ +CSP Q++QW C GL +V
Sbjct: 239 CSKVSGGYSTNIENVPQGGR--TCSP*QVNQWRTCEPRGLQGIV 364
>26294
Length = 430
Score = 30.0 bits (66), Expect = 6.4, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 1005 GGKPFSCSPLQLDQWMWCIFIG 1026
GG P SC LD W WC +G
Sbjct: 98 GGSPQSCQSCCLDCWAWCCPLG 33
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|50345978|ref|NP_001002012.1| heat shock protein 2
[Mus musculus]
(633 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30255 280 e-104
21024 218 7e-57
27378 194 1e-49
26390 164 1e-40
37715 147 1e-35
24750 139 3e-33
06909 99 2e-24
31218 89 5e-18
09881 87 2e-17
20979 86 3e-17
12271 64 2e-10
13684 55 6e-08
03996 52 7e-07
34036 50 3e-06
13300 49 5e-06
>30255
Length = 1761
Score = 280 bits (716), Expect(2) = e-104, Method: Compositional matrix adjust.
Identities = 143/200 (71%), Positives = 154/200 (77%)
Frame = -1
Query: 331 KGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILIGDKSEN 390
K I EIVLVGGSTRIPKIQKLLQDFFNGKEL KSINPDE IL GDKSE
Sbjct: 1644 KPGIHEIVLVGGSTRIPKIQKLLQDFFNGKELCKSINPDEAVAYGACVQAAILHGDKSEE 1465
Query: 391 VQDXXXXXXXXXXXGIETAGGVMTPLIKRNXXXXXXXXXXXXXYSDNQSSVLVQVYEGER 450
VQD GIETAGGVMT LIKRN YSDNQ VL+QVYEGER
Sbjct: 1464 VQDLLLLDVAPLSMGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGER 1285
Query: 451 AMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDK 510
AMT+DNNLLGKF+LTGIPPAPRGVPQIEVTFDIDANGILNV+AADKSTGKENKITITNDK
Sbjct: 1284 AMTRDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAADKSTGKENKITITNDK 1105
Query: 511 GRLSKDDIDRMVQEAERYKS 530
GRLSK++I+RMV +AE+ ++
Sbjct: 1104 GRLSKEEIERMVNDAEKSRT 1045
Score = 116 bits (290), Expect(2) = e-104, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 69/79 (87%)
Frame = -3
Query: 537 DRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYE 596
+R+++KN++ESY +++K T+EDEK++ KI E+DK I+DKC EVI+WLD NQ AEKDEY+
Sbjct: 1027 NRISSKNSLESYAFHMKSTIEDEKIKDKIGEEDKKTIVDKCNEVISWLDANQTAEKDEYD 848
Query: 597 HKQKELERVCNPIISKLYQ 615
KQKELE+VCNPII+KLYQ
Sbjct: 847 DKQKELEKVCNPIITKLYQ 791
>21024
Length = 3220
Score = 218 bits (554), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 127/331 (38%), Positives = 189/331 (57%), Gaps = 10/331 (3%)
Frame = +1
Query: 264 RRLRTAC------ERAKRTLSSSTQASIEIDSLYEGVD----FYTSITRARFEELNADLF 313
+R++ C +++K LSSS Q I + L ++R++FE L L
Sbjct: 988 QRIQWLCRDYVRQQKSKIELSSSLQTDINLPYLTMDASGPKHMNLKLSRSKFESLVESLV 1167
Query: 314 RGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXX 373
+ T+ P +KAL+DA++ K I E++LVGG +R+PK+Q +QD F G+ +KS+NPDE
Sbjct: 1168 KRTVGPCQKALQDAEVKKSDIGEVILVGGMSRMPKVQSTVQDLF-GRTPSKSVNPDEAVA 1344
Query: 374 XXXXXXXXILIGDKSENVQDXXXXXXXXXXXGIETAGGVMTPLIKRNXXXXXXXXXXXXX 433
+L GD V D GIET GGV T LI RN
Sbjct: 1345 IGAAIQGGVLAGD----VTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFST 1512
Query: 434 YSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTA 493
+D Q+ V ++V++GER M DN LLG+F L GIPPAPRGVPQ+EVTFDIDANGI+NV+A
Sbjct: 1513 AADGQTQVEIKVHQGEREMANDNKLLGQFTLVGIPPAPRGVPQVEVTFDIDANGIVNVSA 1692
Query: 494 ADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIK 553
DK TGKE +I I + G LSKD+I+ M++ AE + +D ++ V N +S ++ +
Sbjct: 1693 RDKGTGKEQQIVIQSSGG-LSKDEIENMIKNAEAHAEDDRRKKELVEVLNQADSIIHDTE 1869
Query: 554 QTVEDEKLRGKISEQDKNKILDKCQEVINWL 584
+E+ + ++ +++ +K+ +K EV L
Sbjct: 1870 SKMEE--FKDQLPQEECDKLREKINEVKQLL 1956
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 163/271 (60%), Gaps = 2/271 (0%)
Frame = +3
Query: 4 RGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 62
+G IGIDLGTT SCV + + + +++ N +G+RTTPS +AFT D ER+ G AK Q
Sbjct: 243 KGHVIGIDLGTTNSCVALMEGKQAKVLENSEGSRTTPSVIAFTKDGERISGMPAKRQAVT 422
Query: 63 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEISS 122
N NT+ KRLIGR+FED VQ DMK+ +++V + VE +G+M + P ++ +
Sbjct: 423 NAENTLSATKRLIGRRFEDPEVQKDMKNVSYKIV-KASNGDAWVEAQGKM--YSPSQVGA 593
Query: 123 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 182
VL KMKE AE+YLG KV +AV+TVPAYFNDSQRQATKDAG I+GL + ++ T +
Sbjct: 594 FVLMKMKETAESYLGSKVNNAVVTVPAYFNDSQRQATKDAGQISGLKCV-ACDQRTHSCS 770
Query: 183 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE-DFDNRMV 241
+ + LI G T +S + + + + T +TH E FDN MV
Sbjct: 771 SCFMAWTSLKIK**RCLI*AEGRLT-SLSWRSRRECLKSNQPT--ETHSWEERTFDNYMV 941
Query: 242 SHLAEEFKRKHKKDIGPNKRAVRRLRTACER 272
+ LA EFK++ DI + AV+RLR A E+
Sbjct: 942 NFLASEFKKEQGLDITKDPMAVQRLREAAEK 1034
>27378
Length = 410
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/124 (75%), Positives = 106/124 (85%)
Frame = -1
Query: 247 EFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFE 306
EFKRK+KKD+ N RA+RRLRTA ERAKRTLSSST+A+IE+D+L+EG DFYT I+RARFE
Sbjct: 410 EFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEVDALFEGHDFYTKISRARFE 231
Query: 307 ELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 366
EL ADLFR TL PVEKAL DAK+DK I +IVLVGGSTRIPK+Q LLQ FF GK LN SI
Sbjct: 230 ELCADLFRQTLAPVEKALNDAKMDKQMIHDIVLVGGSTRIPKVQNLLQQFFGGKSLNLSI 51
Query: 367 NPDE 370
NPDE
Sbjct: 50 NPDE 39
>26390
Length = 665
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 405 GIETAGGVMTPLIKRNXXXXXXXXXXXXXYSDNQSSVLVQVYEGERAMTKDNNLLGKFDL 464
GIET GGVMT LI R DNQ SV +QVYEGER+ TKDN+LLG+FDL
Sbjct: 50 GIETVGGVMTTLIARGTTIPARKAKVFSTAQDNQDSVTIQVYEGERSRTKDNHLLGRFDL 229
Query: 465 TGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQE 524
TGIP APRGVPQIEVTF +DANG++ V+A DK TG++N I I LS +D++RMVQE
Sbjct: 230 TGIPAAPRGVPQIEVTFQVDANGVMQVSAEDKGTGQKNDIIIQQSGSGLSPEDVERMVQE 409
Query: 525 AERYKSEDEANRDRVAAKNAVESYTYNIKQTVED------EKLRGKISEQDKNKILDKCQ 578
A+ + ED R+ ++ +ES Y + ++D + G +S+ D L Q
Sbjct: 410 AQDFAEEDRKFRELTESRTGLESLAYTAQHQLQDLHKMXASERPGTLSDDD----LHXAQ 577
Query: 579 EVI 581
EV+
Sbjct: 578 EVV 586
>37715
Length = 468
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 85/113 (75%)
Frame = -2
Query: 93 FRVVSEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFN 152
+V+++ KP +Q G KTF PEEIS+MVL KM++IAEAYLG K+ +AV+TVPAYFN
Sbjct: 458 LKVINKSNKPHIQALVSGATKTFAPEEISAMVLGKMRDIAEAYLGKKIDNAVVTVPAYFN 279
Query: 153 DSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGG 205
D+QRQATKDAGTI GLNV+RIINEPTAAAIAYGLDK+ GEK
Sbjct: 278 DAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKR---DGEKTFWCLTWAA 129
Score = 81.3 bits (199), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 44/49 (89%)
Frame = -1
Query: 196 KNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHL 244
+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ H
Sbjct: 159 ENILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHF 13
>24750
Length = 552
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/71 (91%), Positives = 71/71 (100%)
Frame = +1
Query: 442 LVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKE 501
++QVYEGERAMT+DNNLLGKF+LTGIPPAPRGVPQIEVTFDIDANGILNV+AADKSTGKE
Sbjct: 154 MLQVYEGERAMTRDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAADKSTGKE 333
Query: 502 NKITITNDKGR 512
NKITITNDKG+
Sbjct: 334 NKITITNDKGQ 366
>06909
Length = 456
Score = 99.4 bits (246), Expect(2) = 2e-24, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 56/65 (86%)
Frame = -3
Query: 551 NIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPII 610
++K T+EDEK++ KIS +DK ILDKC EVI WLD NQ+AEKDEY+ KQKE+E+VCNPII
Sbjct: 385 HMKSTIEDEKIKDKISTEDKKTILDKCDEVIAWLDANQLAEKDEYDDKQKEIEKVCNPII 206
Query: 611 SKLYQ 615
+KLYQ
Sbjct: 205 TKLYQ 191
Score = 31.2 bits (69), Expect(2) = 2e-24, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -1
Query: 527 RYKSEDEANRDRVAAKNAVESY 548
+YK +DE + R++AKN++ESY
Sbjct: 456 KYKEDDEKQKSRISAKNSLESY 391
>31218
Length = 322
Score = 89.4 bits (220), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/100 (48%), Positives = 68/100 (68%)
Frame = +2
Query: 228 DTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEI 287
DTHLGGEDFD R+V +L + K+K +D+ + RA+ RLR + E+AKR LSS +++
Sbjct: 2 DTHLGGEDFDQRLVDYLVKLIKQKTGRDVRHDTRAMSRLRRSAEKAKRALSSQHSTKVDL 181
Query: 288 DSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDA 327
D + + T +TRA+FEELN DLFR TL V++AL D+
Sbjct: 182 DGVTSDLADLT-LTRAKFEELNTDLFRSTLTTVKRALEDS 298
>09881
Length = 600
Score = 86.7 bits (213), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 63/103 (61%)
Frame = +3
Query: 7 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 66
A G+ LGT +C+ V++ GK + AND G+R+TP VAFT + +G +AK + N N
Sbjct: 186 AYGVHLGTCSACLAVYKDGKTSVAANDAGDRSTPCVVAFTACDAEVGASAKQGIVSNVKN 365
Query: 67 TIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK 109
T+ + KR++G FED Q + P +VV++ +P +VE+K
Sbjct: 366 TVCNVKRILGLTFEDPVTQEYLASSPVKVVNQKNQPMFEVEFK 494
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +2
Query: 137 GGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 186
G +Q AV+ VP+ F+D QR A A + G VLR+INE +AAA+AY L
Sbjct: 2 GKGIQDAVLAVPSDFSDKQRAAASAAASKAGFKVLRLINECSAAALAYDL 151
>20979
Length = 976
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +1
Query: 233 GEDFDNRMVSHLAEEF--KRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSL 290
G + R+ HLA+ F ++K + N RA+ +L ER K+ LS+++ +++ L
Sbjct: 70 GVEMTLRLRDHLAKVFNGQKKRSFKLEDNPRAMAKLLKEAERVKKVLSANSDHKAQVEGL 249
Query: 291 YEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQ 350
EG DF ++R + EL DL +P+E AL+ +++ +I EI+L+GG +R+P++Q
Sbjct: 250 VEGEDFAAKVSREDYLELIKDLLARVTKPMEDALKVSEITMPEITEIILMGGGSRVPRVQ 429
Query: 351 KLLQDFFNGKELNKSINPDE 370
+ L F +L KSIN DE
Sbjct: 430 EELLKFSGKSDLGKSINTDE 489
>12271
Length = 1762
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = +2
Query: 295 DFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQ 354
DF +TR ++ L DL PV++ L +++ +I EI+L+GG +R+PKI ++L
Sbjct: 41 DFSCKVTRDKYLHLIQDLLDRVTLPVQQVLTASQITWAEITEIILMGGGSRLPKIHEILL 220
Query: 355 DFFNGKELNKSINPDE 370
D+ KEL KS+N DE
Sbjct: 221 DYSGKKELGKSLNTDE 268
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +1
Query: 490 NVTAADKSTGKENKITIT---NDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVE 546
N AA G K+ +T D LSKD + + + ++ DE A+N VE
Sbjct: 937 NKKAASAGKGFNEKLKVTVKVKDMAELSKDQVKQSKKRLTDWRKRDEEKAAVQKARNEVE 1116
Query: 547 SYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWL 584
S+ + + +E +++++ ILD+ + +WL
Sbjct: 1117 SFIITAQDKMSEETYLASSTDEERAXILDQLSQASDWL 1230
>13684
Length = 438
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = -3
Query: 7 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 63
A G+ LGT +C+ V++ GK + AND G+R+TP VAFT + +G +AK + N
Sbjct: 172 AYGVHLGTCSACLAVYKDGKTSVAANDAGDRSTPCVVAFTACDAEVGASAKQGIVSN 2
>03996
Length = 1105
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = -2
Query: 307 ELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 366
EL DL +P+E AL+ +++ +I EI+L+GG +R+P++Q+ L F +L KSI
Sbjct: 1056 ELIKDLLARVTKPMEDALKVSEITMPEITEIILMGGGSRVPRVQEELLKFSGKSDLGKSI 877
Query: 367 NPDE 370
N DE
Sbjct: 876 NTDE 865
>34036
Length = 363
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +2
Query: 591 EKDEYEHKQKELERVCNPIISKLYQ 615
EKDEY+ KQKE+E+VCNPII+KLYQ
Sbjct: 2 EKDEYDDKQKEIEKVCNPIITKLYQ 76
>13300
Length = 453
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Frame = +3
Query: 155 QRQATKDAGTITGLNVLRIINEPTAAAIAYGL-DKKGCAGGEKNVLIFDLGGGTFDVSIL 213
+R+A A G+NVL+++ + A A+ YG+ +K + + +D+G + +++
Sbjct: 3 ERRAIMTAADXVGINVLQLMTDSAAVALNYGVFRRKNFNTTAQYYMFYDMGATSTVATVV 182
Query: 214 T-----IEDGI-------FEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKD--IGPN 259
+ +++G +K D LGG + R+ HLA+ F + K+ + N
Sbjct: 183 SYQVVKVKEGTRVESNPQLTIKGVGFDRTLGGLEMTLRLRDHLAKVFNGQKKRSFKLEDN 362
Query: 260 KRAVRRLRTACERAKRTLSSSTQASIEID 288
RA+ +L ER K+ LS+++ +++
Sbjct: 363 PRAMAKLLKEAERVKKVLSANSDHKAQVE 449
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6678365|ref|NP_033417.1| RAN, member RAS oncogene
family [Mus musculus]
(216 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01972 339 e-104
34359 224 5e-91
08428 92 1e-19
14456 89 1e-18
05468 89 2e-18
17511 87 6e-18
33374 72 1e-17
34468 85 2e-17
13901 83 7e-17
07465 79 1e-15
11728 79 1e-15
26083 79 2e-15
11257 73 1e-13
19006 72 1e-13
07580 62 1e-12
30760 66 9e-12
33794 64 6e-11
13745 64 6e-11
12339 62 2e-10
19656 59 2e-09
33380 58 4e-09
35581 55 3e-08
01398 52 1e-07
32723 52 1e-07
26536 52 2e-07
13750 52 2e-07
31291 52 3e-07
27191 51 4e-07
00858 50 5e-07
19046 50 9e-07
29380 47 5e-06
24619 47 6e-06
00552 42 2e-04
36482 41 3e-04
08153 39 0.001
14775 38 0.003
09204 37 0.005
09827 37 0.008
33605 35 0.019
10708 35 0.019
20290 33 0.10
10862 32 0.16
13795 30 0.97
18248 29 1.5
33029 29 1.7
11357 27 4.6
02253 27 6.0
>01972
Length = 2359
Score = 339 bits (869), Expect(2) = e-104, Method: Compositional matrix adjust.
Identities = 157/180 (87%), Positives = 169/180 (93%)
Frame = +3
Query: 37 KKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 96
KKYVATLGVEVHPL+FHT+RG +KFNVWDTAGQEKFGGLRDGYYIQ QCA+IMFDVTSRV
Sbjct: 381 KKYVATLGVEVHPLLFHTSRGKLKFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRV 560
Query: 97 TYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYN 156
TYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAK+IVFHRKKNLQYYDISAKSNYN
Sbjct: 561 TYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKAIVFHRKKNLQYYDISAKSNYN 740
Query: 157 FEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL 216
FEKPFLWLARKL+GDPNLEFV MPAL PPEV MD LA +YE +L+VAQ ALPD+D+D+
Sbjct: 741 FEKPFLWLARKLVGDPNLEFVEMPALLPPEVAMDAVLAKKYEEELKVAQEVALPDDDEDI 920
Score = 55.5 bits (132), Expect(2) = e-104, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1
Query: 6 EPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEK 37
E + FKLVLVGDGG GKTTFVKRH+TGEFEK
Sbjct: 289 EQEPTFKLVLVGDGGVGKTTFVKRHVTGEFEK 384
>34359
Length = 1042
Score = 224 bits (572), Expect(2) = 5e-91, Method: Compositional matrix adjust.
Identities = 109/136 (80%), Positives = 116/136 (85%)
Frame = +3
Query: 10 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69
FKLVLVG VKRH+TG KKYVATLGVEVHPL F+T+RG ++FNVWDTAGQ
Sbjct: 51 NFKLVLVGGRWEWANNIVKRHVTGS*-KKYVATLGVEVHPLQFNTSRGLLRFNVWDTAGQ 227
Query: 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR 129
EKFGGLRDGYYIQ CAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR
Sbjct: 228 EKFGGLRDGYYIQGTCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR 407
Query: 130 KVKAKSIVFHRKKNLQ 145
KVKAK+IVFHRK+
Sbjct: 408 KVKAKAIVFHRKRTCS 455
Score = 127 bits (318), Expect(2) = 5e-91, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 68/79 (86%)
Frame = +2
Query: 138 FHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQY 197
++KNLQYYDISAKSNYNFEKPFLWLARKL+GDPNL FV MPAL PPEV MDP +A +Y
Sbjct: 431 LSQEKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLXFVEMPALLPPEVAMDPNMAKRY 610
Query: 198 EHDLEVAQTTALPDEDDDL 216
E +L+VAQ ALPD+D+D+
Sbjct: 611 EDELKVAQEVALPDDDEDI 667
>08428
Length = 1109
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Frame = -3
Query: 12 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 71
K+ L+GD G GK++ V R +TG + +T+G + +F +WDTAGQEK
Sbjct: 1065 KVCLLGDSGVGKSSIVLRFVTGSYRPSQESTIGASFMSKSLVVDGAGYRFQIWDTAGQEK 886
Query: 72 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-ENIPIVLCGNKVDIKDRK 130
F L YY A A+I++DVT T+K+V +W ++L NI + + GNK D+++ +
Sbjct: 885 FRALAPMYYRGAAAAVIVYDVTRPRTFKSVKSWIQELRSFGPPNIVLAIAGNKCDLEELR 706
Query: 131 --VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 168
V+ + + + + + SA + N E+ F LAR+L
Sbjct: 705 EVVEKDAQEYASSISAIFGETSAMTAVNVEEMFTELARQL 586
>14456
Length = 1867
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Frame = -1
Query: 19 GGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDG 78
GG GK++ + R ++ +F+ + T+GVE + +WDTAGQE+F LR
Sbjct: 1114 GGVGKSSLMNRFVSNKFDAQSFHTIGVEFLNKDVVVDDETYTMQIWDTAGQERFKSLRTP 935
Query: 79 YYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-----NIPIVLCGNKVDIKDRKV-- 131
+Y A C ++ F V S +++N+ W ++ + + P V+ GNK+D++ R+V
Sbjct: 934 FYRGADCCLLTFSVDSMQSFRNLSMWRKEFLYYADIQDGVTFPFVVLGNKIDVEGRQVTN 755
Query: 132 -KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 168
+A+S N Y++ SAK N EK FL ++L
Sbjct: 754 EEARSWC-TANSNAPYFETSAKDATNVEKAFLAAVQRL 644
>05468
Length = 1558
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Frame = -3
Query: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP-IKFNVWDTAGQ 69
+K++++G+ GTGKT+ +KR++ F + Y AT+GV+ V + + I+ +WD AGQ
Sbjct: 1538 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDADTLIRLQLWDIAGQ 1359
Query: 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL---VRVCEN--IPIVLCGNKV 124
E+FG + YY +A A ++FDVT T+ V W DL V++ + +P VL NK
Sbjct: 1358 ERFGNMTRVYYKEAVGAFVVFDVTRASTFDAVTKWKNDLDSKVQLADGSPVPCVLLANKC 1179
Query: 125 D-IKDRKVKAKSIV--FHRKKN-LQYYDISAKSNYNFEKPFLWLARKLI 169
D K+ V S + F +K + +Y+ SAK N N ++ +L +++
Sbjct: 1178 DQAKEGLVNNTSQMDEFCSEKGFIGWYETSAKENINIDEAARFLVTRIL 1032
>17511
Length = 483
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Frame = -3
Query: 8 QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTA 67
+V K++++GD G GKT+ + +++ +F +Y AT+G + + + +WDTA
Sbjct: 373 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 194
Query: 68 GQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV-----RVCENIPIVLCGN 122
GQE+F L +Y A C +++FDVT T++++ +W + + R EN P V+ GN
Sbjct: 193 GQERFQSLGVAFYRGADCCVLVFDVTMPNTFRSLDSWRDEFLIQASPRDPENFPFVVIGN 14
Query: 123 KVDI 126
K+D+
Sbjct: 13 KIDL 2
>33374
Length = 489
Score = 71.6 bits (174), Expect(2) = 1e-17, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Frame = +1
Query: 59 IKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPI 117
+KF +WDTAGQE++ L YY AQ AI+++D+T++ T+ W ++L R NI I
Sbjct: 175 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVI 354
Query: 118 VLCGNKVDIKDRKVK--AKSIVFHRKKNLQYYDISAKSNYN 156
L GNK D+ ++++ ++ + + +L + + SAK+ N
Sbjct: 355 ALAGNKADLANKRMVEFEEAQAYAEENSLLFMETSAKTAMN 477
Score = 34.3 bits (77), Expect(2) = 1e-17, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +2
Query: 2 AAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 44
A QG+ QFKLVL+G+ GK++ V R + G+F + +T+G
Sbjct: 8 ATQGKI-CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 133
>34468
Length = 1502
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Frame = +1
Query: 6 EPQVQ---FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFN 62
E Q Q FK++++GD GKT R G+F K AT+GV+ + +K
Sbjct: 472 EKQTQRRIFKIIVIGDSNVGKTCLTYRFCLGKFPDKTEATIGVDFREKSIQVDSEHLKLQ 651
Query: 63 VWDTAGQEKF-GGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR--VCENIPIVL 119
+WDTAGQE+F + YY + ++D+T +++N+P W + R + + IP +L
Sbjct: 652 LWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTKMSSFENMPAWIEECDRHNLTKYIPRIL 831
Query: 120 CGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNY---NFEKPFLWLARKLIGDPNL 174
GNK D+ +R ++ F N+ ++ SAK + + + F+ +A KL +
Sbjct: 832 VGNKCDVVERIAVNTNLAQKFADAHNMPLFETSAKDDEKANHVDAIFMTVAHKLKXSKPM 1011
Query: 175 EFVAMPALAPPEV 187
+ + P +V
Sbjct: 1012MPAHLSEMVPGDV 1050
>13901
Length = 962
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = -3
Query: 6 EPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFH-TNRGPIKFNVW 64
+V FK++++GD GKT+FV+R++ F + Y T+GV+ V +++ IK +W
Sbjct: 300 SEEVLFKVIIIGDPTVGKTSFVQRYVNDSFRRDYKMTIGVDFALKVIRWSDKCNIKLQLW 121
Query: 65 DTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNW 104
D AGQE+F + YY A I+MFD+T + TY+N W
Sbjct: 120 DIAGQERFTSMTRVYYKDAHACIVMFDLTQKNTYQNAIRW 1
>07465
Length = 1103
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Frame = +3
Query: 24 TTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQA 83
++ ++R+ G F K Y T+GV+ ++ +WDTAGQE+F + YY A
Sbjct: 240 SSMIQRYCKGIFTKDYKKTIGVDFLERQIEVGGEDVRLMLWDTAGQEEFDAITKAYYRGA 419
Query: 84 QCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKD----RKVKAKSIVFH 139
Q ++ F R +++ + W R + I +V+ NK+D+ D R +A+++
Sbjct: 420 QACVLAFSTVDRDSFEALETWKRKVEDEVGEIGMVIVQNKIDLIDDAVVRPEEAENLA-- 593
Query: 140 RKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPN 173
+K L++Y S K N N ++ F +LA K + N
Sbjct: 594 KKLRLRFYRTSVKENMNVDEVFRYLADKYLHQLN 695
>11728
Length = 635
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Frame = -1
Query: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
K V+VGDG GKT + + T F +Y+ T+ + + + PI +WDTAGQE
Sbjct: 488 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDSKPINLGLWDTAGQE 312
Query: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCENIPIVLCGNKVDIKDR 129
+ LR Y Q +I F + S +++NV W+ ++ C N PI+L G K+D+++
Sbjct: 311 DYDRLRPLSYPQTDVFLICFSLISPASFENVKAKWYPEVSHHCPNTPIILVGTKLDLRED 132
Query: 130 K 130
K
Sbjct: 131 K 129
>26083
Length = 432
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +1
Query: 5 GEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVW 64
G P +FKLV +G+ GKT+ + R + F+ Y AT+G++ + I+ +W
Sbjct: 61 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 240
Query: 65 DTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNK 123
DTAGQE+F L Y + A++++D+T+ ++ W D+ ++ I+L GNK
Sbjct: 241 DTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNK 420
>11257
Length = 1102
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Frame = -2
Query: 63 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-----NIPI 117
+WDTAGQE++ LR +Y C ++ F V + + +++ +W+ + V + + P
Sbjct: 1014 IWDTAGQERYKSLRTPFYRGTDCCLLTFSVDNLKSLQSLSDWYDEFVNYADIQDSASFPF 835
Query: 118 VLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 168
V+ GNK DI++R+V ++ NL Y++ SAK + N ++ FL + R+L
Sbjct: 834 VIIGNKADIEEREVSSEDAYNWCRTHGNLPYFETSAKDSLNVQQAFLAVVRRL 676
>19006
Length = 568
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = -2
Query: 12 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 71
KLV+VGDG GKT + +F + YV T+ E + + ++ +WDTAGQE
Sbjct: 432 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDSKQVELALWDTAGQED 256
Query: 72 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIKD 128
+ LR Y ++ F + S + +N+P W ++ C N+PI+L GNK D+++
Sbjct: 255 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKKDLRN 82
>07580
Length = 921
Score = 62.0 bits (149), Expect(2) = 1e-12, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Frame = +3
Query: 61 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CENIPIV 118
+ DTAG E+F +RD Y Q ++ + +T++ T+ ++ ++RV +++P++
Sbjct: 210 LEILDTAGTEQFTAMRDLYMKNGQGFLLAYSITAQSTFNDLQELREQILRVKDTDDVPML 389
Query: 119 LCGNKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 168
L GNK D++D +V K + R + + + SAK+ N + F+ L R++
Sbjct: 390 LVGNKCDLEDERVVGKDQGQGLARSFSCAFLETSAKARINVNEIFMDLVRQI 545
Score = 27.3 bits (59), Expect(2) = 1e-12, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 6 EPQVQFKLVLVGDGGTGKTTFVKRHLTGEF 35
E ++KLV++G GG GK+ + + G+F
Sbjct: 47 ETMREYKLVVLGSGGVGKSALTVQFVQGDF 136
>30760
Length = 596
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Frame = -1
Query: 12 KLVLVGDGGTGKTTFVK--RHLTGEFEKKYVATLGVEVHPLVFHT--NRGPIKFNVWDTA 67
K ++ GD G GK++ + + F K Y T GVEV + + +R ++ ++D+A
Sbjct: 524 KCIVTGDSGVGKSSICQVFHSDSAHFPKNYSMTTGVEVLVKLVNIPDSRDQVELYLFDSA 345
Query: 68 GQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEN--IPIVLCGNKVD 125
G+E F ++ Q ++++DVT ++ W + N IP VL NK D
Sbjct: 344 GKEIFSENVTKFWDQPSVVMVVYDVTDETSFSGCVRWLERVRAAKPNTVIPGVLVANKTD 165
Query: 126 IKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLA 165
+ +R+ + + + L+Y++ SAK N + PF LA
Sbjct: 164 LDERRRVSRKEGKDLAQSHGLEYFECSAKEMQNTDTPFFCLA 39
>33794
Length = 779
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Frame = -1
Query: 59 IKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIV 118
+K +WDT+GQ +F + Y AQ I+++D+T++ ++ + W +++ IP V
Sbjct: 650 VKLQIWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVEEHAPGIPKV 471
Query: 119 LCGNKVDIK-DRKVKAKSI-VFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEF 176
L GN++ + R+V AK + + N+ ++IS ++N + F LAR + +E
Sbjct: 470 LVGNRLHLAYKRQVAAKQAETYASRNNMSCFEISPLCDFNIRESFCELARMALHRNGMEH 291
Query: 177 V 177
+
Sbjct: 290 I 288
>13745
Length = 1045
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Frame = +2
Query: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV-----RVCENIPIVLCGNK 123
QE+F L +Y A C ++++DVT+ ++KN+ +W + + R E+ P V+ GNK
Sbjct: 2 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVLGNK 181
Query: 124 VDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI 169
VD+ +R+V + K ++ YY+ SAK N E F +A+ +
Sbjct: 182 VDLDNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNAL 325
>12339
Length = 578
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Frame = -2
Query: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV-----RVCENIPIVLCGNK 123
QE+F L +Y A C I+++DVT T+ ++ +W R+ + R E+ P V+ GNK
Sbjct: 577 QERFQSLGVAFYRGADCCILVYDVTEXKTFDSLDSWQREFLNQASPRDPEHFPFVVIGNK 398
Query: 124 VDIKDRKVKAK--SIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
+D+ +R V AK K + Y++ SAK N E+ F +A+ +
Sbjct: 397 IDLDNRVVTAKRGQGWCSTKGGIPYFETSAKEAINVEQAFQTVAKNALA 251
>19656
Length = 428
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 12 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 71
K V+VGDG GKT + + T F +Y+ T+ V R P+ +WDTAGQE
Sbjct: 117 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGR-PVNLGLWDTAGQED 293
Query: 72 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNV-PNWHRDLVRVC 112
+ LR Y Q ++ F V S +++N+ W+ ++ C
Sbjct: 294 YDRLRPLSYPQTDVFLLCFSVASPASFENIRAKWYPEVNHHC 419
>33380
Length = 282
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 51 VFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-V 109
VF ++ +K +WDTAGQE++ + YY A I+M+DVT+ ++ V +W +
Sbjct: 39 VFRQDK-RVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFNAVQDWCTQIKT 215
Query: 110 RVCENIPIVLCGNKVDIKDRKV 131
+N +VL GNK D++D +V
Sbjct: 216 YSWDNAQVVLVGNKCDLEDERV 281
>35581
Length = 364
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 5 GEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPI-KFNV 63
G + FK VL+GD G GKT + R T +F + +L G + ++
Sbjct: 29 GNDTLYFKCVLLGDAGVGKTCLLNRLATDKFLDSPLTSLTTASLLTTVTLTSGVMASVDL 208
Query: 64 WDTAGQEKFGGLRDGYYIQAQCAIIMFD 91
WDTAGQE++ L YY + +I++D
Sbjct: 209 WDTAGQERYRSLTSSYYRDTKAVLIVYD 292
>01398
Length = 1421
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Frame = -2
Query: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWH---RDLVRVCENIPIVLCGNKVD 125
QE+F + YY + II++D+T R T++N+ W+ R+ + + I +VL G+K D
Sbjct: 1420 QERFRSITRSYYRNSVGVIIVYDITKRSTFENLKQWYEEARNHIEPHKAIFLVL-GHKSD 1244
Query: 126 IKD-RKVKAKS-IVFHRKKNLQYYDISAKSNYNFEKPFLWLAR 166
+D R+V A+ F L++++ SAKS +N E F +A+
Sbjct: 1243 REDARQVTAREGRRFAEMHGLKFFETSAKSGHNIEDVFAQIAK 1115
>32723
Length = 384
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +2
Query: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNW-HRDLVRVCENIPIVLCGNKVDIK 127
QE+F + YY A I+++DV S+ +Y+++P W H + + L GNK+D
Sbjct: 2 QERFRSITQSYYRSANALILVYDVCSQQSYESLPQWIHEIELYAGTKVLAFLVGNKIDQT 181
Query: 128 DRKVKAKSI--VFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPN 173
D++ I F + +++ + SAK N EK F +A +L
Sbjct: 182 DKREIPTHIGKEFAERYEMRFLETSAKEADNVEKLFSTIAYQLTAQAQ 325
>26536
Length = 829
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = +2
Query: 59 IKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPI- 117
+ + DTAGQE++ +R+ Y I+++ VT +++ R L R + I
Sbjct: 128 VSWTFLDTAGQEEYSSMREHYTRSGDGFIVVYSVTDVTSFQEAEAVFRWLTRFQDETSIH 307
Query: 118 -VLCGNKVDI-KDRKVK-AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 168
VLCGNK D+ DRKV + + + Y++ SAK+ N + + L R +
Sbjct: 308 AVLCGNKTDLTSDRKVTPEEGRKMADRLGMLYFETSAKTGDNVSQVYHGLLRSI 469
>13750
Length = 503
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Frame = -2
Query: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP---IKFNVWDTAGQEKFGGLRDGY 79
KT ++R+ G F + + T+ V F+ +R +++ +WDT G E + L +
Sbjct: 502 KTCLLRRYQKGFFMDRTMPTIAVLCSE--FNESRTDPLNVRYTLWDTGGAETYRSLWVSH 329
Query: 80 YIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIP---IVLCGNKVDIKDRKVKA-- 133
+ AQ A++++DVT ++ W + L++ NIP ++ G+K D+++ +V +
Sbjct: 328 FRGAQVALLVYDVTCEWSFLTATTVWRKALMK---NIPEAQVIFVGSKTDLEENRVISTE 158
Query: 134 KSIVFHRKKNLQYYDISAKSNYNFEKPF 161
+ F + +++ S+ + N + F
Sbjct: 157 RGQAFATQCGYTFFETSSVTGKNVDAVF 74
>31291
Length = 446
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Frame = -1
Query: 61 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVL 119
+WDTAGQE + LR Y ++ F + S + KNV W+ ++ ++PIVL
Sbjct: 446 LQLWDTAGQEDYDRLRPLAYPNTDVFMLXFSLMSEASMKNVKVKWYPEIRHHDPHVPIVL 267
Query: 120 CGNKVDIKDRKVKAKSIVFHRK---------------KNLQYYDISAKSNYNFEKPF 161
G K+D++ K + + R+ K +Y++ S+K+ N + F
Sbjct: 266 VGTKLDLRQDKEAVRKLRSSRQDPVSSNQGNDLAKAIKAKRYFECSSKTQENLKTAF 96
>27191
Length = 443
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +1
Query: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 82
KT +K +F + Y T+GV+ + N ++ ++WD +G ++ +R+ Y
Sbjct: 1 KTCLIKHFCESKFNQGYQPTVGVDYGFKIQTVNGVDMRVHMWDLSGSNEYLDVRNELYTG 180
Query: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPI-VLCGNKV 124
+ I+FDV++ +++ + +W R++ R P+ V+ GN+V
Sbjct: 181 SDAIFIVFDVSNTPSFEALDSWLREINRFATGSPLNVIVGNRV 309
>00858
Length = 1658
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Frame = -2
Query: 61 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CENIPIV 118
++ DTAGQE+ +RD + + +F V + +++++ + + RV + +P+V
Sbjct: 1441 LDILDTAGQEEXSAMRDQCMRTGEGFLCVFAVXNLKSFEDINQYREQIKRVKDADEVPMV 1262
Query: 119 LCGNKVD-----IKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 168
L GNKVD ++ R+ K + ++H + Y + SAK+ + F L R++
Sbjct: 1261 LVGNKVDLPIRNVEQRQGKHMAELYH----IPYVETSAKTRQGVDDAFYTLVREI 1109
>19046
Length = 445
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = -2
Query: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CENIPIVLCGNKVD- 125
QE+F +R+ Y + +++F VT +++N+ N+H ++RV ++ P++LC NKVD
Sbjct: 444 QEEFSAMREQYMRKGDGFLLVFSVTDFRSFENMANFHTQILRVKDRDSYPMILCANKVDL 265
Query: 126 IKDRKVKAKSIV-FHRKKNLQYYDISAK 152
+ RKV + + + + Y + SAK
Sbjct: 264 VHQRKVSEEQVRDLATRLRIPYIETSAK 181
>29380
Length = 853
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = -2
Query: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRV-CENIPIVLCGNKVDI--KDRKVK---AKSI 136
A AII++DV T+ W ++L + E++ I+L GNKVD+ + R V A+S
Sbjct: 852 ASAAIIVYDVNIADTFSRALAWVKELRQQNTESVLIILAGNKVDLATQHRAVSFEDAQS- 676
Query: 137 VFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI 169
F R+ L + ++SAK+ + F+ LA +LI
Sbjct: 675 -FARENGLLFAEVSAKTGMAVNEIFMTLANQLI 580
>24619
Length = 509
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Frame = -2
Query: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CENIPIVLCGNKVD- 125
QE+F +R+ Y + +++F V +++N+ N+H ++RV + P++LC NKVD
Sbjct: 508 QEEFSAMREQYMRKGDGFLLVFSVIDYQSFENMVNFHTQILRVKDRDTYPMILCANKVDL 329
Query: 126 IKDRKVKAKSIV-FHRKKNLQYYDISAKS-NYNFEKPFLWLARKLIGDP 172
+ RKV + + + + Y + SAK N + F + R + P
Sbjct: 328 VHQRKVSEEQVRDLATRLRIPYIETSAKDPPLNVDLAFHQVVRVIRAQP 182
>00552
Length = 455
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = -3
Query: 45 VEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNW 104
V P V+H +WDTAGQE++ LR +Y C ++ F V + + +++ +W
Sbjct: 180 VAASPDVWH-------HGIWDTAGQERYKSLRTPFYRGTDCCLLTFSVDNLKSLQSLSDW 22
Query: 105 HRDLV 109
+ + V
Sbjct: 21 YDEFV 7
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = -1
Query: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 46
K+VL+GDGG GK++ + R ++ +F+ + T+GVE
Sbjct: 443 LKVVLLGDGGVGKSSLMNRFVSNKFDAQSFHTIGVE 336
>36482
Length = 686
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +2
Query: 29 RHLTGEFEKKYVATLGVEVHPLVFHT--NRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCA 86
R LT F +Y TL +HT ++ + DTAGQ + ++GY + A C
Sbjct: 11 RFLTRRFIGEYCPTLE---SVYKYHTVIEDDDVRLEILDTAGQGTYP-WKEGYALWADCF 178
Query: 87 IIMFDVTSRVTYKNVPNWHRDL--VRVCENIPIVLCGNKVD-IKDRKVKAK 134
+ ++ + R +Y+ + R + VR ++ VL NK D + DR+V K
Sbjct: 179 VFVYSINDRQSYEELVQVKRQVESVRKSTSLTAVLAANKTDLLHDRQVTQK 331
>08153
Length = 1703
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +1
Query: 10 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69
+ ++++VG GKTT + + GE + T+G V + + I F VWD GQ
Sbjct: 82 EVRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKN----ISFTVWDVGGQ 246
Query: 70 EKFGGLRDGYYIQAQCAIIMFDVTSR 95
+K L Y+ Q I + D R
Sbjct: 247 DKIRPLWRHYFQNTQGLIFVVDSNDR 324
>14775
Length = 380
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP---IKFNVWDTAGQEKFGGLRDGY 79
KT ++R+ G F + + T+ V F+ +R +++ +WDT G E + L +
Sbjct: 379 KTCLLRRYQKGFFMDRTMPTIAVLCSE--FNESRTDPLNVRYTLWDTGGAETYRSLWVSH 206
Query: 80 YIQAQCAIIMFDVT 93
+ AQ A++++DVT
Sbjct: 205 FRGAQVALLVYDVT 164
>09204
Length = 1051
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = -3
Query: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDI---- 126
++ + YY A+ AI+ FD+T + ++ + W +L + E + +CG K D+
Sbjct: 1049 RYEAMSRIYYRGAKAAILCFDLTDKSSFDRIRFWIGELRQHEEECKLYICGTKFDLVHDD 870
Query: 127 KDRKVKAKSIVFHRKKNL--QYYDISAKSNYNFEKPFLWLA 165
+R+ +S+ + + Y+ S+ + N EK F +A
Sbjct: 869 PERRAVPRSVAKALADDCMAEIYETSSMTGDNIEKLFTKIA 747
>09827
Length = 1201
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 10/168 (5%)
Frame = -3
Query: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
++++VG GKTT + + GE + T+G V + + I F VWD GQ+
Sbjct: 1112 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKN----ISFTVWDVGGQD 948
Query: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV-----CENIPIVLCGNKVD 125
K L Y+ Q I + D + + V +L R+ + +++ NK D
Sbjct: 947 KIRPLWRHYFQNTQGLIFVVDSNDK---ERVQEAREELTRMLNEDELRDAVLLVFANKQD 777
Query: 126 IKDRKVKA---KSIVFHRKKNLQYY--DISAKSNYNFEKPFLWLARKL 168
+ A + + H +N +Y A + + WL+ +L
Sbjct: 776 LPHAMATAEITEKLGLHGLRNRTWYIQSTCATTGDGLYEGLDWLSNQL 633
>33605
Length = 888
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = +1
Query: 6 EPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWD 65
+ + + +L+++G GKTT +K+ GE TLG + L +RG K NVWD
Sbjct: 484 QKEKEVRLLMLGLDNAGKTTILKK-FNGEDIDTISPTLGFNIKTL---EHRG-FKLNVWD 648
Query: 66 TAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 96
GQ+ Y+ + + D R+
Sbjct: 649 VGGQQSLRSYWRNYFESTDGLVWVVDSADRM 741
>10708
Length = 2775
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 59 IKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP 102
++ +WDTAGQE + LR Y ++ F + S + +N+P
Sbjct: 2723 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIP 2592
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -3
Query: 81 IQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKD 128
+ + CA + +T+ T ++ W ++ C N+PI+L GNK D+++
Sbjct: 2647 MSSLCASPLTALTAWRT--SLKKWTPEVRHFCPNVPIILVGNKKDLRN 2510
>20290
Length = 1550
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 13 LVLVGDGGTGKTTFVKRHLTGEFE---KKYVATLGVEVHPLVFHTN 55
LVL+G+ GTGKTTF+ R L G + + + L + P FH N
Sbjct: 787 LVLLGENGTGKTTFI-RMLAGNLQPDGEVELPMLNISYKPQKFHRN 921
>10862
Length = 2896
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 60 KFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSR 95
+FNVWD GQ+K L YY Q I + D R
Sbjct: 2483 QFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADR 2376
>13795
Length = 642
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 1 MAAQGEPQVQFK-LVLVGDGGTGKTTFVKRHLT 32
M A E Q Q K L ++GDGGT T+FV LT
Sbjct: 204 MTAGSEVQAQAKRLQILGDGGTQPTSFVNSVLT 106
>18248
Length = 466
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 13 LVLVGDGGTGKTTFVKRHLTGEFE 36
+V++G+ GTGKTTF+K L G+ E
Sbjct: 108 IVMLGENGTGKTTFIKM-LAGKLE 176
>33029
Length = 1133
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 77 DGYYIQAQCAIIMFDVTSRVTYKNVPNWHR 106
D +I CAI M ++ ++KN P W R
Sbjct: 682 DCKFILGTCAIFMQQTDTKPSHKNTPQWAR 771
>11357
Length = 1307
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Frame = -2
Query: 145 QYYDISA---KSNYNFEKPFLWLAR-KLIGDPNLEFVAMPAL 182
++YD S+ K+NY+F+K F+W + +L +LE++ + L
Sbjct: 733 EHYDFSSCISKNNYSFKKGFIWFSCIQLFKRGSLEYMLVFVL 608
>02253
Length = 1110
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 38 KYVATLG-VEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 96
+Y+A L + VH V + KFN+ DT+ + F +I C T RV
Sbjct: 213 EYLAQLDKLFVHQKVERNDLASTKFNIMDTSQKPAFEAAESSSFISRLCCFGFRGFTYRV 392
Query: 97 T 97
T
Sbjct: 393 T 395
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|116174793|ref|NP_115999.2| spectrin beta 4 [Mus
musculus]
(2561 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19002 373 e-103
26578 145 2e-34
17613 85 1e-31
19147 122 2e-28
34010 113 1e-24
29446 94 1e-18
05733 76 2e-13
34417 73 2e-12
09711 64 6e-10
11159 63 2e-09
09100 62 2e-09
22703 62 4e-09
19246 61 6e-09
25051 60 1e-08
28965 55 3e-07
32371 38 5e-07
38533 53 2e-06
04951 47 7e-05
29517 46 3e-04
18202 44 0.001
32088 37 0.071
18556 34 0.75
11916 32 4.6
17567 31 5.2
>19002
Length = 842
Score = 373 bits (957), Expect = e-103, Method: Composition-based stats.
Identities = 184/280 (65%), Positives = 219/280 (78%)
Frame = -2
Query: 92 DGFVLTRLLEVLSGEQLPRPTRGRMRIHSLENVDKALQFLKEQRVHLENVGSHDIVDGNH 151
DG +L +LLEV ++ +G+MRIH LENVDKAL FL EQRVHLEN+G+HDIVDG+
Sbjct: 841 DGKMLMKLLEVRVRGEIASDXKGKMRIHCLENVDKALTFLHEQRVHLENMGAHDIVDGSS 662
Query: 152 RLTLGLVWTIILRFQIQVIKIETEDNRETRSAKDALLLWCQMKTAGYPEVNIQNFTTSWR 211
RLTLGL+WTIILRFQIQ I IE DN ET+SAKDALLLWCQMKTAGYP VN++NFTTSWR
Sbjct: 661 RLTLGLIWTIILRFQIQDIMIEEVDNSETKSAKDALLLWCQMKTAGYPNVNVRNFTTSWR 482
Query: 212 DGLAFNALIHRHRPDLVDLSKLTKSNANYNLQRAFRTAEQHLGLARLLDPEDVNMEAPDE 271
DGLAFNA+IH+HRPDLV +L KS+A NLQ AF AE LGL LL+PEDVN+E PDE
Sbjct: 481 DGLAFNAIIHKHRPDLVQYDRLHKSSAIQNLQNAFTVAEDKLGLTALLEPEDVNVEYPDE 302
Query: 272 KSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQVLEVDKIIERYXXXXXXXXXWIHRTVD 331
KSIITYVV++YHYFSKMKA +V+GKRIGKV+D + + IE Y WI +T+
Sbjct: 301 KSIITYVVTYYHYFSKMKADSVQGKRIGKVIDNAINTENSIEEYETLTSDLLEWIEQTIV 122
Query: 332 LISNQKFANSLSGVQQQLQAFTAYCTLEKPVKFQEKGNLE 371
++ +++FANSL+GVQQQL AF Y +EKP KF EKGNLE
Sbjct: 121 ILRDRQFANSLTGVQQQLAAFNTYRIVEKPPKFDEKGNLE 2
>26578
Length = 430
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 101/137 (73%)
Frame = +1
Query: 1714 ERRVSLEQQYWLYQLSRQVDELEHWIAEKEVVAGSPELGQDFEHVSVLQEKFSEFASETG 1773
ERR LE+ + LY L R++ +L WIAEK +VAGS + GQD+EHVS+L+E+F EFA +T
Sbjct: 1 ERRGKLEEVFKLYTLHREIYDLLQWIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTE 180
Query: 1774 TAGRERLAAVNQMVDELIECGHTAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELH 1833
+ G+ER+A+ N++ D+LI H+ +A++AEWKD +NEAWA+LLEL+ TR QLL +S ELH
Sbjct: 181 SMGQERVASANEICDQLIALDHSDSASIAEWKDNVNEAWADLLELIDTRTQLLQSSWELH 360
Query: 1834 KFFSDARELQGQIEEKR 1850
KF + ++ +I R
Sbjct: 361 KFLYECKDTLERITRNR 411
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +1
Query: 1609 RQQTLDAAFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTXXXXXXXXXXEQGVEN 1668
R+ L+ F++ + ++ ++ W+ E+ L+ S D G+D + + E+
Sbjct: 4 RRGKLEEVFKLYTLHREIYDLLQWIAEKSLVAGSNDPGQDYEHVSMLKEQFKEFARDTES 183
Query: 1669 Y-EESIAQLSRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVSLEQQYWLYQ 1727
+E +A + C L+ + H DS I+ + V+ + L EL + R L+ + L++
Sbjct: 184 MGQERVASANEICDQLIALDHSDSASIAEWKDNVNEAWADLLELIDTRTQLLQSSWELHK 363
Query: 1728 L 1728
Sbjct: 364 F 366
>17613
Length = 1108
Score = 84.7 bits (208), Expect(2) = 1e-31, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Frame = +3
Query: 243 QRAFRTAEQHLGLARLLDPED-VNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKV 301
Q F +HL + R+LDPED VN PDE+S++ YV S+YH FS + RI KV
Sbjct: 366 QHCF*HRRKHLDIPRMLDPEDMVNSAKPDERSVMAYVSSYYHAFSGAQQAETAANRICKV 545
Query: 302 LDQVLEVDKIIERYXXXXXXXXXWIHRTVDLISNQKFANSLSGVQQQLQAFTAYCTLEKP 361
L E ++++E Y WI RT + N+ N+L G + +L F Y +KP
Sbjct: 546 LKVNQENERLMEEYERLASDLLEWIRRTRPWLENRVTDNTLPGTRHKLDEFRDYRRKQKP 725
Query: 362 VKFQEKGNLEVL 373
++ + + L
Sbjct: 726 PSWRTRPSWRTL 761
Score = 72.8 bits (177), Expect(2) = 1e-31, Method: Composition-based stats.
Identities = 52/139 (37%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Frame = +1
Query: 116 MRIHSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQI----QVIK 171
MR H + NV+KAL ++ QR G H R +R+ + QV
Sbjct: 4 MRFHKIANVNKALDYIDLQR---GQTGLH-----RSRRNC*RQRKDDIRYDLDNYPQVCH 159
Query: 172 IETEDNRETRSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDLS 231
+R T + +++ KTA Y VN+QNF S++DGLAF ALIHRHRP+L+D
Sbjct: 160 -PRHHSRRTHCQRRTVIV-VPAKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPELIDYH 333
Query: 232 KLTKSNANYNLQRAFRTAE 250
L+K N NL AF AE
Sbjct: 334 SLSKDNPLENLNTAFDIAE 390
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 363 KFQEKGNLEVLLFSIQSKLRAHNRRLFVPREGCGIWDIDKAWGXXXXXXXXXXXXXXXXX 422
K ++K LE ++Q++LR NR ++P EG + DI AW
Sbjct: 728 KLEDKAKLENSFNTLQTRLRLSNRPAYLPTEGKMVSDIANAWKGLEHAEKGFEEWLLSEL 907
Query: 423 XXXXKLELLAQRFDHKVAMRESWLNENQRLVSQDNFG-YELPAVEAAMKKH 472
+L+ LAQ+F HK + E W + ++ +F L ++A KKH
Sbjct: 908 QRLERLDHLAQKFRHKCEIHEEWSQGKEDMLQSRDFKQCRLNELKAMKKKH 1060
>19147
Length = 474
Score = 122 bits (307), Expect(2) = 2e-28, Method: Composition-based stats.
Identities = 57/106 (53%), Positives = 77/106 (72%)
Frame = +1
Query: 130 FLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRETRSAKDALLL 189
++ + V L ++G+ +IVDGN ++TLG++WTIILRF IQ I +E +AK+ LLL
Sbjct: 49 YIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDITVEE------LTAKEGLLL 210
Query: 190 WCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDLSKLTK 235
WCQ KTA Y VN+QNF S++DGLAF ALIHRHRP+L+D L+K
Sbjct: 211 WCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPELIDYHSLSK 348
Score = 24.3 bits (51), Expect(2) = 2e-28, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 115 RMRIHSLENVDKALQFLKEQR 135
+MR H + NV+KAL+ + QR
Sbjct: 3 KMRFHKIANVNKALELHRLQR 65
>34010
Length = 832
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 89/146 (60%)
Frame = +3
Query: 1964 ADKPRDVSSVEVLMNYHQGLKTELEARVPELATCQELGRSLLLNKSAMADEIQAQLDKLG 2023
A KPRDVS VE+LMN HQ LK E++AR A C LGR LL K +E++ +L +L
Sbjct: 78 AGKPRDVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLLNRKHYRQEEVREKLIQLT 257
Query: 2024 SRKEEVSEKWDRHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLI 2083
+ ++++ W WE LQ +LEV+QFA++A VA+AWL AQE +++LG ++D VE LI
Sbjct: 258 LERLDMTDLWKDRWEHLQLILEVYQFARDAAVAEAWLVAQEQYFLNQDLGDTLDAVENLI 437
Query: 2084 RRHEAFRKAAAAWEERFSSLRRLTTI 2109
+ + + A + LR+ I
Sbjct: 438 KSMKPLKSCCHA-RRKICCLRKTNHI 512
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +3
Query: 1115 PRSLEEADGLLARHAALKEEVDQREEDYARIVXXXXXXXXXXXXXXXXXXXXDEWLPHLE 1174
PR + + L+ H +LK E+D REE++A + E L L
Sbjct: 87 PRDVSGVELLMNNHQSLKAEIDAREENFAICINLGRDLLNRKHYRQEEVR---EKLIQLT 257
Query: 1175 VGWHKLLGLWEERREAL-VQAHVYQLFLRDLCQALAVLRNQEVALSGAELPCTVESVEEA 1233
+ + LW++R E L + VYQ F RD A A L QE +L T+++VE
Sbjct: 258 LERLDMTDLWKDRWEHLQLILEVYQ-FARDAAVAEAWLVAQEQYFLNQDLGDTLDAVENL 434
Query: 1234 MK 1235
+K
Sbjct: 435 IK 440
>29446
Length = 1445
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Frame = +3
Query: 63 VQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPT-RGRMRIHSL 121
+QK TFT+W N HL V I DL +D DG L L+EVLSG++ R R L
Sbjct: 999 IQKNTFTRWANEHLRTVNKAIADLESDFSDGLRLVALIEVLSGKKFKHVNKRPNFRTQKL 1178
Query: 122 ENVDKALQFLKEQR-VHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET 180
ENV L+FL++ + + N+ S DIVD +L LGL+WT+IL + I + E E+ +
Sbjct: 1179 ENVTLTLKFLEDDEGIRIVNIDSTDIVDKKLKLILGLIWTLILHYSISMPMWEGEEPTPS 1358
Query: 181 R---SAKDALLLWCQMKT 195
+ K LL W Q K
Sbjct: 1359 EGGPTPKQRLLNWIQSKV 1412
>05733
Length = 1021
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Frame = +2
Query: 186 ALLLWCQ--MKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDLSKLTKSNANYNLQ 243
+LL WCQ + Y V+I +FT+SWR GLAF ALIH RP L+ + L + N Q
Sbjct: 467 SLLRWCQRVLNXGTYRGVHIIDFTSSWRSGLAFCALIHAFRPHLISPASLMECETVKNNQ 646
Query: 244 RAFRTAEQHLGLARLLDPEDVNMEA-PDEKSIITYVVSFYHYF 285
AF A++ LG+A ++ ED+ A PD+ +++ Y+ F+ F
Sbjct: 647 LAFDVAQKELGIAPVMRGEDMAACAVPDKLTMVAYLSQFHELF 775
>34417
Length = 1096
Score = 72.8 bits (177), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 206 FTTSWRDGLAFNALIHRHRPDLVDLSKLTKSNANYNLQRAFRTAEQHLGLARLLDPED-V 264
++ W +GLAF ALIH PD D S+L N YN + AF TAE+ ++ LLD ED +
Sbjct: 35 LSSCWNNGLAFCALIHHFYPDAFDYSQLQPQNRRYNFELAFDTAEKLADISPLLDVEDMI 214
Query: 265 NMEAPDEKSIITYVVSFYHYF 285
M+ PD K + TYV SFY +
Sbjct: 215 KMKNPDWKCVFTYVQSFYRHL 277
>09711
Length = 3041
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 16/222 (7%)
Frame = +1
Query: 59 EREAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLS------GEQLPRPT 112
+ E+ ++KT+ W+NS V + LY+DL DG ++ +L + + + +
Sbjct: 835 KEESREEKTYRNWMNS--LGVSPFVHHLYSDLYDGLIIFQLYDYIQPGLVDWSKVKKKFN 1008
Query: 113 RGRMRIHSLENVDKALQF---LKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQV 169
+ + R +EN + A++ +K +V L + DI+DGN LTLGLVW ++ + + +
Sbjct: 1009 KLKARFERIENCNYAVELGPQVKLVKVKLVGIAGQDILDGNPVLTLGLVWQLMRAYTLAI 1188
Query: 170 IKIETEDNRETRSAKDALLLWCQMKTAGYPEVNIQNFTT-SWRDGLAFNALIHRHRPDLV 228
+ TE+N+ + + ++ W K + I F DG+ +I +P +V
Sbjct: 1189 LSKITENNKPI--SDNEIITWVNSKIK--KDDRISGFQDRKLNDGVIVARVIEAIKPGIV 1356
Query: 229 DLSKLTKSNANYNLQRAFRTAEQHLGLARLLD------PEDV 264
+ + S +Y Q A +GLAR + PED+
Sbjct: 1357 NWDNIDCSARDY--QDRLTNARYAIGLARKIGAGVYALPEDI 1476
Score = 38.9 bits (89), Expect = 0.030, Method: Composition-based stats.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 29/269 (10%)
Frame = +1
Query: 61 EAVQKKTFTKWVNSHLARV-GC-HIGDLYAD-------LRDGFVLTRLLEVLSGEQLPRP 111
+A ++K F +W+N HL+ C H+ L AD + DG +L +L+ +
Sbjct: 43 KAGEQKAFAEWINRHLSDXPDCKHLLPLDADGTQLFGQMADGVLLCKLINHSVSNTIDER 222
Query: 112 TRGRMRI---HSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQ 168
T + + EN+ A+ N+G D+ G L LGL+W II +
Sbjct: 223 TINKQNLSLYRRHENLTLAVNSAGAIGCTTVNIGPEDLAAGRPHLVLGLLWQIIRIGLLS 402
Query: 169 VIKI-------------ETEDNRETRSAKDALLLWC--QMKTAGYPEVNIQNFTTSWRDG 213
I + ET ++ S + LL W + AG + I NF +D
Sbjct: 403 DINLAHHPGLVNLLLDGETIEDLIRLSPEQILLRWVNYHLNRAGC-DRQIXNFGEDIKDS 579
Query: 214 LAFNALIHRHRPDL--VDLSKLTKSNANYNLQRAFRTAEQHLGLARLLDPEDVNMEAPDE 271
A+ L+ + P V LS L+ + + + + A++ +G + DV + ++
Sbjct: 580 EAYTHLLKQISPPSAGVTLSPLSVGDVHQRAECMLQEADK-IGCRSFVGASDV--VSGNQ 750
Query: 272 KSIITYVVSFYHYFSKMKALAVEGKRIGK 300
K + +V + ++ + + VE + + K
Sbjct: 751 KLNLAFVANLFNNYPALDTPQVEVEDVMK 837
>11159
Length = 520
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +2
Query: 2437 RSWVSLYCVLSKGELGFYKDSKG----PASGGTHGGEPLLSLHKATSEVASDYKKKKHVF 2492
RSW + L L +KD G S H + +H A + +A+DY KK+HVF
Sbjct: 65 RSWKMFFITLRDLVLYLHKDEHGFRKSQMSDNLHNA---IRIHHALATMANDYTKKQHVF 235
Query: 2493 KLQTQDGSEFLLQAKDEEEMNGWLEAV 2519
+LQT D +E+L Q D +E++ W+E +
Sbjct: 236 RLQTADQAEYLFQTSDSKELHSWVETI 316
>09100
Length = 930
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Frame = +1
Query: 64 QKKTFTKWVNSHLAR-VGCH-IGDLYADLRDGFVLTRLLEVLSGEQLP-----RPTRGRM 116
Q + W+NS L + G H I DL D+RDG V ++ ++S +Q+P T M
Sbjct: 463 QLSAYMAWINSQLKKKPGAHLIEDLRHDMRDGVVFADVIHIVSKQQIPGIQNVPTTLDEM 642
Query: 117 RIHSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQ 166
R +NVD+ L F+ + R+ + + S DIV+GN + + L+ + ++
Sbjct: 643 R----QNVDRVLHFMTQNRIKMHRISSRDIVEGNLKAVMRLILALAAHYK 780
>22703
Length = 906
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%)
Frame = -3
Query: 2001 GRSLLLNKSAMADEIQAQLDKLGSRKEEVSEKWDRHWEWLQQMLEVHQFAQEAVVADAWL 2060
GRS + N ++ EI+ ++ +L E + + + QQ LE Q E +AW+
Sbjct: 859 GRSFIANGHFLSKEIEEKIKQLDQSLEGLIRNLEHRRKLHQQNLEAQQLRHEMEQIEAWM 680
Query: 2061 TAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRR 2105
+EPLL+ ++ G S++ E+++RRH+ F K A E+R ++L+R
Sbjct: 679 NLREPLLKEKKFGESIEGAEEMLRRHD*F*KTVTAQEDRVNALQR 545
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = -3
Query: 521 LTGLVGA---RRTRLEQNLALQKVFQEMVYMVDWMEEMQTQLLSRECGQHLVEADDLLQK 577
L GL+ RR +QNL Q++ EM + WM + L ++ G+ + A+++L++
Sbjct: 784 LEGLIRNLEHRRKLHQQNLEAQQLRHEMEQIEAWMNLREPLLKEKKFGESIEGAEEMLRR 605
Query: 578 HGLLEGDIAAQSERVEAL 595
H + AQ +RV AL
Sbjct: 604 HD*F*KTVTAQEDRVNAL 551
>19246
Length = 440
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Frame = +2
Query: 2419 EGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDSKGPASGGTHGG----EPLLSL 2474
EG L K + +K S+RSW ++ VL L KD + G TH EP +S+
Sbjct: 8 EGPLWCKTAVSDGKKCSDRSWKQVWAVLRGHALFLIKDRR---DGSTHPTFSFEEPPISI 178
Query: 2475 HKATSEVASDY-KKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAV 2519
++A DY +K+KHVF+L T S +LLQA+D+ M W++A+
Sbjct: 179 KSCLVDIAHDYSRKRKHVFRLTTYSESVYLLQAEDKGTMMSWIQAI 316
>25051
Length = 1017
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Frame = -2
Query: 2415 TVQHE-GFLLRKRELDANRKSS---NRSWVSLYCVLSKGELGFYKDSKGPASG-GTHGGE 2469
TV+++ G+++RK ++ R+ + R W +Y +L L YKD G +
Sbjct: 920 TVEYKKGYVMRKSCMEPGRRKTPFGKRGWRMVYTILRDLILYQYKDEHQVKKGQFVESSQ 741
Query: 2470 PLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAVANSVA 2524
++ +H A + ASDY KK+HVF+LQT D +E+L Q E+ W++ + N VA
Sbjct: 740 NVVRIHHALATKASDYTKKQHVFRLQTADWAEYLFQTGGTIELQEWIDTI-NLVA 579
>28965
Length = 421
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%)
Frame = +2
Query: 1557 RREIQAHGPRLEEVLERAGVLASLRSPEAEAVRRGQEQLQSAWTGLREAAERRQQTLDAA 1616
++++Q H ++ EV A L + PE E +R+ QE++ AW LR+ + RQ+ L A
Sbjct: 2 QKDLQNHEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGA 181
Query: 1617 FQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTXXXXXXXXXXEQGVENYEESIAQL 1676
+++++ D E AW+ E++ ++ ++D G+D S E+ + EE + L
Sbjct: 182 HEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNAL 361
Query: 1677 SRQCRALLEMGHPDSEQI 1694
+ L + SEQI
Sbjct: 362 GTESVRLQGIHGDQSEQI 415
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +2
Query: 1663 EQGVENYEESIAQLSRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVSLEQQ 1722
++ ++N+E+ + +++ L+ GHP+ E I ++Q +V+ + L++L R+ L
Sbjct: 2 QKDLQNHEDKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGA 181
Query: 1723 YWLYQLSRQVDELEHWIAEKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRER-LA 1781
+ + + +R DE WI EK+ V + + G+D V LQ K G ER LA
Sbjct: 182 HEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHE---------GVERDLA 334
Query: 1782 AVNQMVDEL 1790
A+ + V+ L
Sbjct: 335 ALEEKVNAL 361
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%)
Frame = +2
Query: 485 RVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQKVFQE 544
+V V LA+ L +G+ + + +++ V W L L R+ RL +Q+ ++
Sbjct: 29 KVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRD 208
Query: 545 MVYMVDWMEEMQTQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAALRFSQ 604
+ W++E L + + G+ L L +KH +E D+AA E+V AL ++R
Sbjct: 209 ADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGTESVRLQG 388
Query: 605 LQGYQP 610
+ G Q
Sbjct: 389 IHGDQS 406
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +2
Query: 1778 ERLAAVNQMVDELIECGHTAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFS 1837
+++ VN + ++L+ GH T+ + ++ +NEAW L +L R + L + E+ +F
Sbjct: 26 DKVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNR 205
Query: 1838 DARELQGQIEEKRRRLPRLTAPPEPRPSAS--SMQRTLRAFEHD 1879
DA E I+EK L+ R AS ++QR E D
Sbjct: 206 DADETIAWIQEKD---AVLSTDDYGRDLASVQTLQRKHEGVERD 328
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = +2
Query: 2025 RKEEVSEKWDR-------HWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVD 2077
++EEV+E W R E L E+ +F ++A AW+ ++ +L + + G +
Sbjct: 104 KQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLA 283
Query: 2078 EVEQLIRRHEAFRKAAAAWEERFSSL 2103
V+ L R+HE + AA EE+ ++L
Sbjct: 284 SVQTLQRKHEGVERDLAALEEKVNAL 361
Score = 37.7 bits (86), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +2
Query: 1907 EAIASREQEVLQGWKEL--LAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAA 1964
E I +++EV + WK L L+ RL+ + RF+ A + ++W+ +
Sbjct: 89 ETIRQKQEEVNEAWKRLRQLSLLRQERLY--GAHEIQRFNRDADETIAWIQEKDAVLSTD 262
Query: 1965 DKPRDVSSVEVLMNYHQGLKTE---LEARVPELAT 1996
D RD++SV+ L H+G++ + LE +V L T
Sbjct: 263 DYGRDLASVQTLQRKHEGVERDLAALEEKVNALGT 367
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +2
Query: 932 RVLDVNQTVQELVEGGHPSSDEVRSCQDHLNSRWNRIVELVEQRKEEMSAVLLVENHVLE 991
+V++VN ++LV GHP + +R Q+ +N W R+ +L R+E + ++ +
Sbjct: 29 KVVEVNTLAEQLVTDGHPEEETIRQKQEEVNEAWKRLRQLSLLRQERLYGAHEIQRFNRD 208
Query: 992 VAEVRAQVREK 1002
E A ++EK
Sbjct: 209 ADETIAWIQEK 241
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 774 FGADLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLA 833
F D D + W+++ + + D+G D AS + L R+H + ++ A V L +
Sbjct: 197 FNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAALEEKVNALGTESV 376
Query: 834 TLGGASG 840
L G G
Sbjct: 377 RLQGIHG 397
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 433 QRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKH 472
QRF+ +W+ E ++S D++G +L +V+ +KH
Sbjct: 191 QRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKH 310
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 1509 ASKELHQVAHDLDDELAWVQERLPLAMQTERGTGLQAVQQHIKKNQGLRREIQA 1562
+ E+ + D D+ +AW+QE+ + + G L +VQ +K++G+ R++ A
Sbjct: 176 GAHEIQRFNRDADETIAWIQEKDAVLSTDDYGRDLASVQTLQRKHEGVERDLAA 337
>32371
Length = 625
Score = 37.7 bits (86), Expect(2) = 5e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 225 PDLVDLSKLTKSNANYNLQRAFRTAEQHLGLARLLDPED-VNMEAPDE 271
PDL+D L+K N YN AF AEQ L + L+ D V + PD+
Sbjct: 549 PDLIDYDSLSKENVLYNNNLAFTVAEQELDIPAFLEAADMVALRTPDK 406
Score = 36.2 bits (82), Expect(2) = 5e-07, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -1
Query: 201 VNIQNFTTSWRDGLAFNALIHRHR 224
V+I++ SWR+GLAF A+IHR R
Sbjct: 622 VDIKDLLVSWRNGLAFCAIIHRFR 551
>38533
Length = 380
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Frame = +1
Query: 1520 LDDELAWVQ-ERLPLAMQTERGTGLQAVQQHIKKNQGLRREIQAHGPRLEEVLERAGVLA 1578
++DEL+W +R P+A T+ G L AVQ +KK+Q L EI AH P ++ V A +
Sbjct: 1 VEDELSWYY*DRKPIAESTDLGNSLTAVQNLMKKHQALESEIVAHEPLIDAVATSAQQMI 180
Query: 1579 SLRSPEAEAVRRGQEQLQSAWTGLREAAERRQQTL-------DAAFQVEQYYFDVAEVEA 1631
+ +Q+ L A+R Q F +++Y +V EVE
Sbjct: 181 RTK-------HFATADIQTRLDDLTSPAQRSQVFYLL*KVETAGCFGAQKFYMEVNEVEL 339
Query: 1632 WLGEQ 1636
W+ E+
Sbjct: 340 WMNEK 354
>04951
Length = 2852
Score = 47.4 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Frame = +1
Query: 121 LENVDKALQF---LKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDN 177
+EN + A+Q +K ++ L +G DI DGN LTLGLVW ++ + + ++ TED
Sbjct: 7 IENCEYAVQLGPQMKVCKMKLVGIGGKDIHDGNPVLTLGLVWQLMRAYTLAILSKLTEDK 186
Query: 178 RETRSAKDALLLWCQMKTAGYPEVNIQNFTTS-WRDGLAFNALIHRHRPDLVDLSKLTKS 236
+ + ++ ++ W K + I +F S DG+ +I +P +V+ + +
Sbjct: 187 KPIQDSE--IVDWVNSKVK--KDERIGSFQDSKLNDGVIVAKVIESIKPGIVNWENINPN 354
Query: 237 NANYNLQRAFRTAEQHLGLARLLD------PEDV 264
+ + + A A +GLAR + PED+
Sbjct: 355 ASEPDDRLA--NARYAIGLARKIGAGVYALPEDI 450
>29517
Length = 622
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = -1
Query: 2482 ASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAVANSVAEHAEIA 2530
A+DY K+ +VF+L+ GSE+L QAKD E + W+ + NSV E A
Sbjct: 589 AADYSKRPYVFRLKLSSGSEYLFQAKDAAERDTWIGRI-NSVTGGREPA 446
>18202
Length = 424
Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Frame = -1
Query: 66 KTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHSLENVD 125
+ + W NS L V + ++ + +++G VL L++VL+ P G +
Sbjct: 385 QVYLSWANSVLCEVNSSVENV-SSIQEGRVLCELIDVLA------PEAGLLDKVQASGKS 227
Query: 126 KALQFLKEQRVHLENVG------SHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRE 179
F+ H++N G + DI+DG+ + L ++W +IL + I I R
Sbjct: 226 GQRAFIYAALDHMKNHGIKIVFSTQDIMDGDIKSLLDVMWLLILNYGIHFIG-NNSFQRS 50
Query: 180 TRSAKDALLLWCQ 192
+ K LL WCQ
Sbjct: 49 VGAGKKNLLDWCQ 11
>32088
Length = 1928
Score = 37.4 bits (85), Expect = 0.071, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Frame = +1
Query: 64 QKKTFTKWVN---------SHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRG 114
++K F W+N HL V DL+ + DG +L +L+ +
Sbjct: 1264 EQKAFAAWINRHLKDDPDCKHLMEVNEEGDDLFKKVGDGILLCKLINHSVSNTIDERAIN 1443
Query: 115 RMRI---HSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTII 162
+ + H EN+ A+ N+G D+ G L LGL+W II
Sbjct: 1444 KSNLNVYHRHENLTLAVNSAGSIGCTTVNIGPEDLAAGRPHLVLGLLWQII 1596
>18556
Length = 799
Score = 34.3 bits (77), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 186 ALLLWCQMKTAGYP-EVNIQNFTTSWRDGLAFNALIHRHRPDLVDLSKLTKSNANYNLQR 244
+LL W ++ A Y ++ + +R+G ALI R RPDL+D + + +
Sbjct: 44 SLLRWISVQLAAYQFTAELKEPSDVFRNGRVLCALISRFRPDLIDYAATKDMSPLECNEL 223
Query: 245 AFRTAEQHLGLARLL 259
AF E+ L + R++
Sbjct: 224 AFAVLERELHIDRIM 268
>11916
Length = 2024
Score = 31.6 bits (70), Expect = 4.6, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 278 VVSFYHYFSKMKALAVEGKRIGKVLDQVLEVDKIIERYXXXXXXXXXWIHRTVDLISNQK 337
+V YH+FS + + ++ K++D +L++D+ + + T ++ NQK
Sbjct: 208 LVHNYHFFS-LSTFILNKQQ--KMIDSLLDMDQSHTKLTT---------NETNKIMLNQK 351
Query: 338 FANSLSGVQQQ-LQAFTAYCTLEKPVK 363
++ + G Q+Q L F+++C L PVK
Sbjct: 352 YSITSHGKQKQYLDFFSSFCCLACPVK 432
>17567
Length = 448
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 5/153 (3%)
Frame = -3
Query: 1607 ERRQQTLDAAFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTXXXXXXXXXXEQGV 1666
E R+ TL + + ++ ++ L E + ++ ED GK Q+T E +
Sbjct: 428 ESRKSTLSGYNNLMAMFREIESIQEELKEVQSKVVGEDYGKHLQATQDMLEQHSLQEAQL 249
Query: 1667 ENYEESIAQLSRQCRALLEMGHPD-----SEQISRRQSQVDRLYVALKELGEERRVSLEQ 1721
+ + +L+R+ + E + Q++ Q+Q D+ RR LE
Sbjct: 248 QALTRRVRKLNRKSQGAQEQSLDKRLEALNAQLNNVQAQSDK-----------RRQGLET 102
Query: 1722 QYWLYQLSRQVDELEHWIAEKEVVAGSPELGQD 1754
YQ + +E + W+ E+ SP LG+D
Sbjct: 101 AQQYYQFLQDTEEEDRWVGERIDAVRSPSLGKD 3
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31982302|ref|NP_032240.2| histidyl-tRNA synthetase
[Mus musculus]
(509 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
18389 371 e-103
12536 33 0.002
20113 29 4.3
30183 29 5.1
>18389
Length = 664
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 193/221 (87%)
Frame = +2
Query: 76 VFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVPF 135
VF II+CFKRHGAE IDTPVFELKETLTGKYGEDSKLIYDL DQGGE+ SLRYDLTVPF
Sbjct: 2 VFAKIIQCFKRHGAETIDTPVFELKETLTGKYGEDSKLIYDLADQGGEIASLRYDLTVPF 181
Query: 136 ARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIM 195
ARYLAMNK+TNIKRYHIAKVYRRDNPAMT+GRYREFYQCDFDIAGQ+DPM+PDAEC+K++
Sbjct: 182 ARYLAMNKVTNIKRYHIAKVYRRDNPAMTKGRYREFYQCDFDIAGQYDPMLPDAECVKLV 361
Query: 196 CEILSSLQIGNFLVKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDKVSWEEVKNEMVG 255
EI+SSL IG+F+VKVN RR+LDGMFA CGVPD KFR ICS+VDKLDK WE+V+ EMV
Sbjct: 362 AEIMSSLNIGDFVVKVNHRRLLDGMFAACGVPDGKFRPICSAVDKLDKSPWEDVRXEMVE 541
Query: 256 EKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQAV 296
EKGL P ADRIG+YV+ GG L + LL+DP L + K AV
Sbjct: 542 EKGLDPAAADRIGEYVRLQGGSELADDLLRDPNLQKQKSAV 664
>12536
Length = 495
Score = 32.7 bits (73), Expect(2) = 0.002, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3
Query: 422 EERLKLVSELWDAGIKAE 439
EERLKL +ELWDA IKAE
Sbjct: 493 EERLKLCAELWDADIKAE 440
Score = 26.2 bits (56), Expect(2) = 0.002, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 442 YKKNPKLLNQLQYWEEAG 459
YK+NPK L Q QY E
Sbjct: 434 YKRNPKALTQFQYCERGA 381
>20113
Length = 1344
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 220 MFAVCGVPDSKFRTICSSVDKLDKVSWEEVKN 251
MF C + + +FRT+CS + K W V N
Sbjct: 24 MFYFC*ISNERFRTLCSQISKSFV*RWRTVCN 119
>30183
Length = 463
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -1
Query: 263 VADRIGDYVQQHGGVSLVEQLLQDPKLSQNK 293
V D +GD+ +QH G S + Q ++D K+S ++
Sbjct: 361 VLDNMGDWCKQHHGQSGLTQAVRDSKISASE 269
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6679995|ref|NP_032142.1| gamma-glutamyltransferase 1
[Mus musculus]
(568 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10880 372 e-103
28633 135 6e-32
28479 53 3e-07
>10880
Length = 1352
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 279/450 (62%), Gaps = 4/450 (0%)
Frame = -1
Query: 107 EVAPRLANTTMF-NNSKDSEEGGLSVAVPGEIRGYELAHQRHGRLPWARLFQPSIQLARH 165
E AP A M+ N S GGL+VA+PG+++G HQR+G + W L QPSI L
Sbjct: 1352 ETAPAAATADMYVANMTLSTLGGLAVAIPGQLKGLWTLHQRYGSVAWRDLVQPSIDLCTD 1173
Query: 166 GFPVGKGLAIALDKKRDVIEKTPALCEVFCRQGKVLQEGETVTMPKLADTLQILAQEGAK 225
G P+ + L + DV+ P F GKV G + PKLA TL+++A +G
Sbjct: 1172 GVPLSEALRERAIQYYDVLRDDPEYSMFFDGDGKVPALGTKLQRPKLAATLRVVADQGVH 993
Query: 226 AFYNGSLTAQIVKDIQEAGGIMTVEDLNNYRAELIEHPMSIGL--GDATLYVPSAPLSGP 283
AFYNGSLT IV DI+ AGGI+T DL +Y+ ++ + P++ L TL+ P SG
Sbjct: 992 AFYNGSLTDNIVADIRGAGGIITRADLEDYQVDMPD-PVTFNLTHDGLTLFSMPPPGSGV 816
Query: 284 VLILILNILKGYNFSPKSVATPEQKALTYHRIVEAFRFAYAKRTMLGDPKFVDVSQVIRN 343
VL ILNIL GY F+ SV E LTYHRIVEA +FAYAKRT LGD + V+V++++ N
Sbjct: 815 VLEYILNILSGYRFNEDSVKK-EHAVLTYHRIVEAMKFAYAKRTQLGDMRVVNVTELVAN 639
Query: 344 MSSEFYATQLRARITDETTHPAAYYEPEFYLQDDGGTAHLSAVSEDGSAVAATSTINLYF 403
M+S ++R+ ITD T AYY P F D GT+H+S V G+AV+ TSTIN F
Sbjct: 638 MTSSEKGEEIRSMITDSMTXDLAYYGPAFSDVTDAGTSHISVVDGSGNAVSITSTINTSF 459
Query: 404 GSKVLSRVSGILFNDEMDDFSSPNFINQFRVAPSPANFIKPGKQPLSSMCPSIILDKD-G 462
GSKV +GI+FN+EMDDFS+PN N + V SP NFI PGK+P+SSM P++ +D + G
Sbjct: 458 GSKVKGSRTGIIFNNEMDDFSTPNTTNFYGVPASPTNFIAPGKRPMSSMSPTVAVDXNSG 279
Query: 463 QVRMVVGASGGTQITTSVALAIINSLWFGYDVKRAVEEPRLHNQLLPNTTTVEKDIDQVV 522
V +V+GA+GGT ITTSVAL +++LWF DV A++ PR+H+QLLP T+E + +
Sbjct: 278 DVELVLGAAGGTMITTSVALVTMDTLWFKMDVPEAIDAPRIHHQLLPPEITMEDGFPEYI 99
Query: 523 TAGLKIRHHHTEVTPTFIAVVQAVVRASGG 552
GLK + H+ P + +VV A+ R + G
Sbjct: 98 REGLK-QKGHSVTAPXWKSVVTAIHRTADG 12
>28633
Length = 459
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Frame = -3
Query: 263 PMSIGLGDA-TLYVPSAPLSGPVLILILNILKGYNFSPKSVATPEQKALTYHRIVEAFRF 321
P+ + L D T++ P P SG VL +LN+L GYN + + + T HRIVE F+F
Sbjct: 457 PIQVTLDDGLTVFSPPPPSSGAVLSFMLNVLDGYNMTSXDLDGADNSVRTLHRIVETFKF 278
Query: 322 AYAKRTMLGDPKFVDVSQVIRNMSSEFYATQLRARITDETTHPAAYYEPEFYLQDDGGTA 381
AYA RT LGD F +V++V+ N++S +A +R++ITD TH +YY P Y + GTA
Sbjct: 277 AYAIRTDLGDEDFYNVTEVVXNLTSRNFANYIRSKITDNMTHNVSYYGPTIYDRYTTGTA 98
Query: 382 HLSAVSEDGSAVAATSTINLYFGSKVLSR 410
H+S V ++G+AV+ATSTIN FGSK R
Sbjct: 97 HISIVDDEGNAVSATSTINTKFGSKRRGR 11
>28479
Length = 399
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Frame = +1
Query: 469 GASGGTQITTSVALAIINSLWFGYDVKRAVEEPRLHNQLLPNTTTVEKDIDQVVTAG--- 525
GAS T+I T V ++N F ++K A++ PRLH QL P T +D+ G
Sbjct: 4 GASNATRIITGVVETLVNMFIFDMNLKEAIDFPRLHQQLYPTDHTEYEDVASAPVPGGKD 183
Query: 526 ------LKIRHHHTEV-TPTFIAVVQAVVRASGGWAAASDSRKGGEPAGY 568
+K T V P ++ V ++++ + +A +D RKGG+ A Y
Sbjct: 184 VFPLDVVKALTSQTMVPVPEGLSCVNSIMKINDNVSAIADWRKGGKSAFY 333
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|124339829|ref|NP_034609.2| heat shock 70kDa protein
1A [Mus musculus]
(641 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30255 284 e-102
21024 216 3e-56
37715 145 6e-55
27378 202 2e-52
26390 157 2e-38
24750 136 3e-32
06909 86 2e-21
31218 92 5e-19
09881 87 3e-17
20979 87 3e-17
12271 61 1e-09
13684 55 7e-08
03996 54 2e-07
13300 45 8e-05
34036 34 0.039
02981 30 2.6
>30255
Length = 1761
Score = 284 bits (727), Expect(2) = e-102, Method: Compositional matrix adjust.
Identities = 142/199 (71%), Positives = 154/199 (77%)
Frame = -1
Query: 328 KAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEXXXXXXXXXXXILMGDKSEN 387
K IH++VLVGGSTRIPK+QKLLQDFFNG++L KSINPDE IL GDKSE
Sbjct: 1644 KPGIHEIVLVGGSTRIPKIQKLLQDFFNGKELCKSINPDEAVAYGACVQAAILHGDKSEE 1465
Query: 388 VQDXXXXXXXXXXXXXETAGGVMTALIKRNSXXXXXXXXXXXXYSDNQPGVLIQVYEGER 447
VQD ETAGGVMTALIKRN+ YSDNQPGVLIQVYEGER
Sbjct: 1464 VQDLLLLDVAPLSMGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGER 1285
Query: 448 AMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDK 507
AMTRDNNLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDK
Sbjct: 1284 AMTRDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAADKSTGKENKITITNDK 1105
Query: 508 GRLSKEEIERMVQEAERYK 526
GRLSKEEIERMV +AE+ +
Sbjct: 1104 GRLSKEEIERMVNDAEKSR 1048
Score = 106 bits (264), Expect(2) = e-102, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 66/78 (84%)
Frame = -3
Query: 534 DRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFV 593
+R+++KN+LESYAF+MKS +EDE +K K+ E DKK ++DKC EVISWLD+N A+K+E+
Sbjct: 1027 NRISSKNSLESYAFHMKSTIEDEKIKDKIGEEDKKTIVDKCNEVISWLDANQTAEKDEYD 848
Query: 594 HKREELERVCSPIISGLY 611
K++ELE+VC+PII+ LY
Sbjct: 847 DKQKELEKVCNPIITKLY 794
>21024
Length = 3220
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 222/422 (52%), Gaps = 6/422 (1%)
Frame = +1
Query: 166 GLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGD 225
G NVLR+INEPTAAA+A + + + + F DV L + D V +
Sbjct: 727 G*NVLRVINEPTAAALALWHGQV*R*SDSGV*FR----RRDV*HLYLGDPEGSV*SQINQ 894
Query: 226 T-HLGGE-DFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLE 283
H+ G S + RK K SQ + + R +++K LSSS Q +
Sbjct: 895 RRHIPGRRGLLTTTWSTSWHQNLRKSKD*TSQRIQWLCRDYVRQQKSKIELSSSLQTDIN 1074
Query: 284 IDSLFEGID----FYTSITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGG 339
+ L ++R++FE L L + T+ P +KAL+DA++ K+ I +++LVGG
Sbjct: 1075 LPYLTMDASGPKHMNLKLSRSKFESLVESLVKRTVGPCQKALQDAEVKKSDIGEVILVGG 1254
Query: 340 STRIPKVQKLLQDFFNGRDLNKSINPDEXXXXXXXXXXXILMGDKSENVQDXXXXXXXXX 399
+R+PKVQ +QD F GR +KS+NPDE +L GD V D
Sbjct: 1255 MSRMPKVQSTVQDLF-GRTPSKSVNPDEAVAIGAAIQGGVLAGD----VTDVLLLDVTPL 1419
Query: 400 XXXXETAGGVMTALIKRNSXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGRF 459
ET GGV T LI RN+ +D Q V I+V++GER M DN LLG+F
Sbjct: 1420 SLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMANDNKLLGQF 1599
Query: 460 ELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMV 519
L GIPPAPRGVPQ+EVTFDIDANGI+NV+A DK TGK +I I + G LSK+EIE M+
Sbjct: 1600 TLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGG-LSKDEIENMI 1776
Query: 520 QEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVIS 579
+ AE + +D +++ V N +S + +S +E+ K +L + + K+ +K EV
Sbjct: 1777 KNAEAHAEDDRRKKELVEVLNQADSIIHDTESKMEE--FKDQLPQEECDKLREKINEVKQ 1950
Query: 580 WL 581
L
Sbjct: 1951 LL 1956
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 159/271 (58%), Gaps = 4/271 (1%)
Frame = +3
Query: 3 KNTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 61
K IGIDLGTT SCV + + + +++ N +G+RTTPS +AFT D ER+ G AK Q
Sbjct: 243 KGHVIGIDLGTTNSCVALMEGKQAKVLENSEGSRTTPSVIAFTKDGERISGMPAKRQAVT 422
Query: 62 NPQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQVV--NDGDKPKVQVNYKGESRSFFPEEI 119
N +NT+ KRLIGR+F D VQ DMK+ +++V ++GD + + + + P ++
Sbjct: 423 NAENTLSATKRLIGRRFEDPEVQKDMKNVSYKIVKASNGD-----AWVEAQGKMYSPSQV 587
Query: 120 SSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAA 179
+ VL KMKE AE+YLG V NAV+TVPAYFNDSQRQATKDAG I+GL + +
Sbjct: 588 GAFVLMKMKETAESYLGSKVNNAVVTVPAYFNDSQRQATKDAGQISGLKCVACDQRTHSC 767
Query: 180 AIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGE-DFDNRLV 238
+ + + K + + G +S + + + + T +TH E FDN +V
Sbjct: 768 SSCFMAWTSLKIK**RCLI*AEGRLTSLSWRSRRECLKSNQPT--ETHSWEERTFDNYMV 941
Query: 239 SHFVEEFKRKHKKDISQNKRAVRRLRTACER 269
+ EFK++ DI+++ AV+RLR A E+
Sbjct: 942 NFLASEFKKEQGLDITKDPMAVQRLREAAEK 1034
>37715
Length = 468
Score = 145 bits (367), Expect(2) = 6e-55, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 81/96 (84%)
Frame = -2
Query: 92 FQVVNDGDKPKVQVNYKGESRSFFPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFN 151
+V+N +KP +Q G +++F PEEIS+MVL KM++IAEAYLG + NAV+TVPAYFN
Sbjct: 458 LKVINKSNKPHIQALVSGATKTFAPEEISAMVLGKMRDIAEAYLGKKIDNAVVTVPAYFN 279
Query: 152 DSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDR 187
D+QRQATKDAG IAGLNV+RIINEPTAAAIAYGLD+
Sbjct: 278 DAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDK 171
Score = 87.8 bits (216), Expect(2) = 6e-55, Method: Composition-based stats.
Identities = 37/52 (71%), Positives = 47/52 (90%)
Frame = -1
Query: 194 NVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEF 245
N+L+FDLGGGTFDVS+LTID+G+FEV AT GDTHLGGEDFD R++ HF++ +
Sbjct: 156 NILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLY 1
>27378
Length = 410
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/124 (77%), Positives = 108/124 (87%)
Frame = -1
Query: 244 EFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFE 303
EFKRK+KKD+ N RA+RRLRTA ERAKRTLSSST+A++E+D+LFEG DFYT I+RARFE
Sbjct: 410 EFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEVDALFEGHDFYTKISRARFE 231
Query: 304 ELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSI 363
ELC+DLFR TL PVEKAL DAKMDK IHD+VLVGGSTRIPKVQ LLQ FF G+ LN SI
Sbjct: 230 ELCADLFRQTLAPVEKALNDAKMDKQMIHDIVLVGGSTRIPKVQNLLQQFFGGKSLNLSI 51
Query: 364 NPDE 367
NPDE
Sbjct: 50 NPDE 39
>26390
Length = 665
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 109/181 (60%), Gaps = 6/181 (3%)
Frame = +2
Query: 404 ETAGGVMTALIKRNSXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSG 463
ET GGVMT LI R + DNQ V IQVYEGER+ T+DN+LLGRF+L+G
Sbjct: 56 ETVGGVMTTLIARGTTIPARKAKVFSTAQDNQDSVTIQVYEGERSRTKDNHLLGRFDLTG 235
Query: 464 IPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAE 523
IP APRGVPQIEVTF +DANG++ V+A DK TG+ N I I LS E++ERMVQEA+
Sbjct: 236 IPAAPRGVPQIEVTFQVDANGVMQVSAEDKGTGQKNDIIIQQSGSGLSPEDVERMVQEAQ 415
Query: 524 RYKAEDEVQRDRVAAKNALESYAFNMKSAVED------EGLKGKLSEADKKKVLDKCQEV 577
+ ED R+ ++ LES A+ + ++D G LS+ D L QEV
Sbjct: 416 DFAEEDRKFRELTESRTGLESLAYTAQHQLQDLHKMXASERPGTLSDDD----LHXAQEV 583
Query: 578 I 578
+
Sbjct: 584 V 586
>24750
Length = 552
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +1
Query: 439 LIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKA 498
++QVYEGERAMTRDNNLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK
Sbjct: 154 MLQVYEGERAMTRDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAADKSTGKE 333
Query: 499 NKITITNDKGR 509
NKITITNDKG+
Sbjct: 334 NKITITNDKGQ 366
>06909
Length = 456
Score = 86.3 bits (212), Expect(2) = 2e-21, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = -3
Query: 547 FNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPI 606
+MKS +EDE +K K+S DKK +LDKC EVI+WLD+N LA+K+E+ K++E+E+VC+PI
Sbjct: 388 LHMKSTIEDEKIKDKISTEDKKTILDKCDEVIAWLDANQLAEKDEYDDKQKEIEKVCNPI 209
Query: 607 ISGLY 611
I+ LY
Sbjct: 208 ITKLY 194
Score = 34.7 bits (78), Expect(2) = 2e-21, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -1
Query: 524 RYKAEDEVQRDRVAAKNALESYA 546
+YK +DE Q+ R++AKN+LESYA
Sbjct: 456 KYKEDDEKQKSRISAKNSLESYA 388
>31218
Length = 322
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 68/100 (68%)
Frame = +2
Query: 225 DTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEI 284
DTHLGGEDFD RLV + V+ K+K +D+ + RA+ RLR + E+AKR LSS +++
Sbjct: 2 DTHLGGEDFDQRLVDYLVKLIKQKTGRDVRHDTRAMSRLRRSAEKAKRALSSQHSTKVDL 181
Query: 285 DSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDA 324
D + + T +TRA+FEEL +DLFR TL V++AL D+
Sbjct: 182 DGVTSDLADLT-LTRAKFEELNTDLFRSTLTTVKRALEDS 298
>09881
Length = 600
Score = 86.7 bits (213), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 64/106 (60%)
Frame = +3
Query: 3 KNTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALN 62
K A G+ LGT +C+ V++ GK + AND G+R+TP VAFT + +G +AK + N
Sbjct: 177 KMAAYGVHLGTCSACLAVYKDGKTSVAANDAGDRSTPCVVAFTACDAEVGASAKQGIVSN 356
Query: 63 PQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQVVNDGDKPKVQVNYK 108
+NTV + KR++G F D V Q + P +VVN ++P +V +K
Sbjct: 357 VKNTVCNVKRILGLTFEDPVTQEYLASSPVKVVNQKNQPMFEVEFK 494
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +2
Query: 136 GHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRT 188
G + +AV+ VP+ F+D QR A A AG VLR+INE +AAA+AY L +T
Sbjct: 2 GKGIQDAVLAVPSDFSDKQRAAASAAASKAGFKVLRLINECSAAALAYDLGQT 160
>20979
Length = 976
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Frame = +1
Query: 230 GEDFDNRLVSHFVEEFKRKHKKD--ISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSL 287
G + RL H + F + K+ + N RA+ +L ER K+ LS+++ +++ L
Sbjct: 70 GVEMTLRLRDHLAKVFNGQKKRSFKLEDNPRAMAKLLKEAERVKKVLSANSDHKAQVEGL 249
Query: 288 FEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQ 347
EG DF ++R + EL DL +P+E AL+ +++ +I +++L+GG +R+P+VQ
Sbjct: 250 VEGEDFAAKVSREDYLELIKDLLARVTKPMEDALKVSEITMPEITEIILMGGGSRVPRVQ 429
Query: 348 KLLQDFFNGRDLNKSINPDE 367
+ L F DL KSIN DE
Sbjct: 430 EELLKFSGKSDLGKSINTDE 489
>12271
Length = 1762
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%)
Frame = +2
Query: 292 DFYTSITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQ 351
DF +TR ++ L DL PV++ L +++ A+I +++L+GG +R+PK+ ++L
Sbjct: 41 DFSCKVTRDKYLHLIQDLLDRVTLPVQQVLTASQITWAEITEIILMGGGSRLPKIHEILL 220
Query: 352 DFFNGRDLNKSINPDE 367
D+ ++L KS+N DE
Sbjct: 221 DYSGKKELGKSLNTDE 268
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 500 KITI-TNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGL 558
K+T+ D LSK+++++ + ++ DE + A+N +ES+ + + +E
Sbjct: 982 KVTVKVKDMAELSKDQVKQSKKRLTDWRKRDEEKAAVQKARNEVESFIITAQDKMSEETY 1161
Query: 559 KGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCS 604
++ ++ +LD+ + WL + K+ F E CS
Sbjct: 1162 LASSTDEERAXILDQLSQASDWLYEQSHQAKKWFSPTNTET*GTCS 1299
>13684
Length = 438
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = -3
Query: 3 KNTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALN 62
K A G+ LGT +C+ V++ GK + AND G+R+TP VAFT + +G +AK + N
Sbjct: 181 KMAAYGVHLGTCSACLAVYKDGKTSVAANDAGDRSTPCVVAFTACDAEVGASAKQGIVSN 2
>03996
Length = 1105
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = -2
Query: 304 ELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSI 363
EL DL +P+E AL+ +++ +I +++L+GG +R+P+VQ+ L F DL KSI
Sbjct: 1056 ELIKDLLARVTKPMEDALKVSEITMPEITEIILMGGGSRVPRVQEELLKFSGKSDLGKSI 877
Query: 364 NPDE 367
N DE
Sbjct: 876 NTDE 865
>13300
Length = 453
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Frame = +3
Query: 154 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRT---GKGERNVLIFDLGGGTFDVSIL 210
+R+A A G+NVL+++ + A A+ YG+ R + + +D+G + +++
Sbjct: 3 ERRAIMTAADXVGINVLQLMTDSAAVALNYGVFRRKNFNTTAQYYMFYDMGATSTVATVV 182
Query: 211 T-----IDDGI-------FEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKD--ISQN 256
+ + +G +K D LGG + RL H + F + K+ + N
Sbjct: 183 SYQVVKVKEGTRVESNPQLTIKGVGFDRTLGGLEMTLRLRDHLAKVFNGQKKRSFKLEDN 362
Query: 257 KRAVRRLRTACERAKRTLSSSTQASLEID 285
RA+ +L ER K+ LS+++ +++
Sbjct: 363 PRAMAKLLKEAERVKKVLSANSDHKAQVE 449
>34036
Length = 363
Score = 33.9 bits (76), Expect(2) = 0.039, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 21/24 (87%)
Frame = +2
Query: 588 DKEEFVHKREELERVCSPIISGLY 611
+K+E+ K++E+E+VC+PII+ LY
Sbjct: 2 EKDEYDDKQKEIEKVCNPIITKLY 73
Score = 21.6 bits (44), Expect(2) = 0.039, Method: Composition-based stats.
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1
Query: 633 SGPTIEEVD 641
+GPTIEEVD
Sbjct: 151 AGPTIEEVD 177
>02981
Length = 1736
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Frame = -1
Query: 507 KGRLSKEEIERMVQ-EAERYKAEDEVQRDRVAA 538
KGR+ KEE ER+ + EAER KAEDE QR R AA
Sbjct: 1055 KGRM-KEEAERLAEIEAERKKAEDE-QRAREAA 963
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|30519997|ref|NP_848760.1| bleomycin hydrolase [Mus
musculus]
(455 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
19078 369 e-102
27397 33 0.33
34509 33 0.34
17854 29 3.9
26028 29 4.8
16373 28 6.3
03747 28 6.8
39186 28 6.9
>19078
Length = 872
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 164/286 (57%), Positives = 218/286 (76%)
Frame = +2
Query: 65 TNQKSSGRCWIFSCLNVMRLPFMKKFNIEEFEFSQSYLFFWDKVERCYFFLNAFVDTAQK 124
TNQ+SSGRCW+F+ LN +RLPFMK +N++EFEFSQ++LF+WDK+ERC +FLN V TA++
Sbjct: 2 TNQRSSGRCWLFAALNCIRLPFMKNYNLDEFEFSQAFLFYWDKIERCNYFLNNIVKTAKR 181
Query: 125 KEPEDGRLVQYLLMNPTNDGGQWDMLVNIVEKYGVVPKKCFPESHTTEATRRMNDILNHK 184
E DGRLV +LL++PT+DGGQW MLVN++ K+G++PKKCFPES + E++ RMN IL K
Sbjct: 182 GEEVDGRLVSFLLLDPTSDGGQWHMLVNLITKHGLMPKKCFPESFSCESSIRMNAILKSK 361
Query: 185 MREFCIRLRNLVHSGATKGEISSTQDAMMEEIFRVVCICLGNPPETFTWEYRDKDKNYHK 244
+RE+ LR L+ + EI+S M EI++VV ICLG P ETFTWEY DK KN+
Sbjct: 362 LREYARNLRELLEKKPSDEEITSKIQEQMAEIYKVVGICLGIPAETFTWEYYDKSKNFQS 541
Query: 245 IGPITPLQFYKEHVKPLFNMEDKICFVNDPRPQHKYNKLYTVDYLSNMVGGRKTLYNNQP 304
IGPI+ L+FY+ +VKP FN+EDK+C V DPRP +Y+++YTVD L N+VGGR LYNNQ
Sbjct: 542 IGPISSLEFYENYVKPHFNVEDKVCLVTDPRPTSRYDQVYTVDCLGNVVGGRPVLYNNQN 721
Query: 305 IDFLKKMVAASIKDGEAVWFGCDVGKHFNGKLGLSDMNVYDHELVF 350
+D L MV S++ GEAVWFGC+V K F K G+ DM+V++ +LV
Sbjct: 722 VDLLLAMVTKSLQAGEAVWFGCEVSKRFASKQGIEDMDVHNFKLVL 859
>27397
Length = 375
Score = 32.7 bits (73), Expect = 0.33, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 74 WIFSCLNVMRLPFMKKFNIEEFEFSQSYLFFWD 106
+IF C++V+ + FM F F+F++++ FW+
Sbjct: 146 YIFVCVSVLSIQFMVFFGGNNFDFNRTFFSFWN 48
>34509
Length = 408
Score = 32.7 bits (73), Expect = 0.34, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 362 RLAFGESLMTHAMTFTAVSEKDNQEGTFVKWRVENSWGEDHGHKGYLCMTDEWFS 416
R++F S+ H +E D +E F GEDHG + LC +W++
Sbjct: 121 RVSFQRSIHRHCDGSAEAAEPDREEDMF--------QGEDHGPQALLCAPQQWYT 261
>17854
Length = 759
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +2
Query: 225 GNPPETFTWEYRDKDKNYHKIGPITPLQFY-KEHVKPLFNME--DKICFVNDPRPQHKYN 281
G P + + + D +Y + G + +++ K+ V L + + + V+ RP+ K
Sbjct: 287 GLPEDLMSTDLXRGDMDYRRKGKMVAVRWRDKKDVNFLSTIHKPEMVEVVSRSRPERKRK 466
Query: 282 KLYTVDYLSNMVGGRKTLYNNQPIDFL 308
TVDY++NM G ++NQ I +L
Sbjct: 467 PTATVDYINNMAG---VNHSNQLISYL 538
>26028
Length = 414
Score = 28.9 bits (63), Expect = 4.8, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 378 AVSEKDNQEGTFVKWRVENSWGEDHGHKGY 407
VS+ N T W V+NSWG G +GY
Sbjct: 199 GVSDYPNFHKTLPYWIVKNSWGPRWGEQGY 110
>16373
Length = 996
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -2
Query: 387 GTFVK---WRVENSWGEDHGHKGYLCMT 411
GTF W V+NSWG D G GY+ M
Sbjct: 575 GTFQSQQYWLVKNSWGVDWGMXGYIMMA 492
>03747
Length = 1915
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 370 MTHAMTFTAVSEKDNQEGTFVKWRVENSWGEDHGHKGYLCMT 411
+ H + +D +E W V+NSWG G KGY+ M+
Sbjct: 276 LDHGVLAVGYGSEDGKE----FWLVKNSWGLSWGEKGYIKMS 389
>39186
Length = 728
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 392 WRVENSWGEDHGHKGYLCMT 411
W V+NSWG D G GY+ +
Sbjct: 533 WIVKNSWGTDWGMNGYILIA 474
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|33563256|ref|NP_034436.1| guanine nucleotide binding
protein (G protein), alpha inhibiting 3 [Mus musculus]
(354 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11965 367 e-102
13527 235 2e-62
29196 141 4e-34
20516 114 6e-26
34094 70 9e-13
08153 51 9e-07
09827 49 2e-06
10862 49 2e-06
18949 42 3e-04
11378 40 0.002
18208 32 0.44
15546 32 0.50
08297 30 1.3
20750 30 1.3
>11965
Length = 3256
Score = 367 bits (942), Expect = e-102, Method: Compositional matrix adjust.
Identities = 172/222 (77%), Positives = 191/222 (86%)
Frame = +1
Query: 133 DGGVQACFSRSREYQLNDSASYYLNDLDRISQTNYIPTQQDVLRTRVKTTGIVETHFTFK 192
D GVQ CFSRS EYQLNDSA Y+L+DLDR+ +Y+PT+QD+LRTRVKTTGIVE HF+FK
Sbjct: 1 DSGVQDCFSRSNEYQLNDSAKYFLDDLDRLGTKDYMPTEQDILRTRVKTTGIVEVHFSFK 180
Query: 193 ELYFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDS 252
L FK+FDVGGQRSERKKWIHCFE VTAIIFCVA+S+YD VL EDE NRM ES+KLFDS
Sbjct: 181 NLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDS 360
Query: 253 ICNNKWFTDTSIILFLNKKDLFEEKIKRSPLTICYPEYTGSNTYEEAAAYIQCQFEDLNR 312
ICNNKWFTDTSIILFLNKKDLFEEKIK+SPLT+C+PEYTG TYEE AAYIQ QFE N+
Sbjct: 361 ICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTVCFPEYTGKQTYEEVAAYIQAQFEAKNK 540
Query: 313 RKDTKEVYTHFTCATDTKNVQFVFDAVTDVIIKNNLKECGLY 354
KE+Y H TCATDT N+QFVFDAVTDVII NNL+ CGLY
Sbjct: 541 SSQ-KEIYCHQTCATDTNNIQFVFDAVTDVIIANNLRGCGLY 663
>13527
Length = 1091
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/198 (57%), Positives = 145/198 (73%), Gaps = 1/198 (0%)
Frame = -2
Query: 1 MGCTLSAEDKAAVERSKMIDRNLREDXXXXXXXXXXXXXXXXXSGKSTIVKQMKIIHEDG 60
MGCTLSAE++AA+ERSK I++NL+ED SGKSTIVKQMKIIHE G
Sbjct: 1042 MGCTLSAEERAAMERSKAIEKNLKEDGMQAAKDIKLLLLGAGESGKSTIVKQMKIIHEGG 863
Query: 61 YSEDECKQYKVVVYSNTIQSIIAIIRAMGRLKIDFGESARADDARQLF-VLAGSAEEGVM 119
++ ++ KQY+ VV+SNTIQS++AIIRAMG L I FG++ R DA+ + V+A +
Sbjct: 862 FTSEDNKQYRPVVFSNTIQSLVAIIRAMGTLSIPFGDNERESDAKMVLDVIARMEDTEPF 683
Query: 120 TSELAGVIKRLWRDGGVQACFSRSREYQLNDSASYYLNDLDRISQTNYIPTQQDVLRTRV 179
+ EL ++RLW D GVQ CFSRS EYQLNDSA Y+L+DLDR+ +Y+PT+QD+LRTRV
Sbjct: 682 SEELLAAMERLWMDSGVQDCFSRSNEYQLNDSAKYFLDDLDRLGTKDYMPTEQDILRTRV 503
Query: 180 KTTGIVETHFTFKELYFK 197
KTTGIVE HF+FK L FK
Sbjct: 502 KTTGIVEVHFSFKNLNFK 449
>29196
Length = 431
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
Frame = -2
Query: 125 GVIKRLWRDGGVQACFSRSRE-----YQLNDSASYYLNDLDRI-SQTNYIPTQQDVLRTR 178
+KRLW D GVQ C SR+ LN S + RI SQ N +
Sbjct: 430 AAMKRLWLDSGVQEC-SRAATNTN*TIPLNISWMI*IG*ALRITSQPN-----RTFCAPE 269
Query: 179 VKTTGIVETHFTFKELYFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDE 238
+ + K L FK+FDVGGQRSERKKWIHCFE VTAIIFCVA+S+YD VL EDE
Sbjct: 268 SRPPAL*RFISPLKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDE 89
Query: 239 EMNRMHESMKLFDSICNNKWFTDTSIILF 267
NRM ES+KLFDSICNNKWFTDTSIILF
Sbjct: 88 TTNRMQESLKLFDSICNNKWFTDTSIILF 2
>20516
Length = 534
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Frame = +2
Query: 190 TFKELYFKMFDV-GGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMK 248
TF+ ++F + +V GGQRS+R+KW CF G+T+I+F A S++D VL ED + NR+ ES
Sbjct: 41 TFRNIFFLVGEVTGGQRSQRQKWYQCFVGITSILFLAASSEFDQVLMEDRKTNRLQESCD 220
Query: 249 LFDSICNNKWFTDTSIILFLNKKDLFEEKIKRSPLTICYPEYTGSNTYEEAAAYIQCQFE 308
+F++I NNK F+ SIILFLNK DL ++K L + ++G + + I
Sbjct: 221 IFETIINNKSFSGVSIILFLNKMDLLQDKN*ACQLRRLFSRFSG*SQGH*CSQSI*ASAV 400
Query: 309 DLNRRKDTKEVYTHFTCATDTKNVQFVFDAVTDVIIKNNLKE 350
+ HFT A DT+N++ VF V D I+ +NL+
Sbjct: 401 *FAPT*SKQTFVHHFTTAIDTENIKHVFQDVKDTILHDNLRS 526
>34094
Length = 452
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +1
Query: 54 KIIHEDGYSEDECKQYKVVVYSNTIQSIIAIIRAMGRLKIDFGESARA 101
+IIHE GYS++EC QYK VVYSN IQS+IAI+RAM L ++FG RA
Sbjct: 103 RIIHEKGYSQEECLQYKPVVYSNAIQSMIAIVRAMNLLSVEFGHPDRA 246
>08153
Length = 1703
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 58/151 (38%)
Frame = +1
Query: 177 TRVKTTGIVETHFTFKELYFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAE 236
T + T G +K + F ++DVGGQ R W H F+ +IF V +D + +
Sbjct: 163 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERINEA 342
Query: 237 DEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKRSPLTICYPEYTGSNTY 296
EE+ RM L D+I I++F NK+DL N Y
Sbjct: 343 KEELARMLNEDDLRDAI----------ILVFANKQDL-------------------PNAY 435
Query: 297 EEAAAYIQCQFEDLNRRKDTKEVYTHFTCAT 327
+ +L RK Y TCAT
Sbjct: 436 SASEVTAHLGLANLKGRK----WYMQATCAT 516
>09827
Length = 1201
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Frame = -3
Query: 177 TRVKTTGIVETHFTFKELYFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAE 236
T + T G +K + F ++DVGGQ R W H F+ +IF V +D + V
Sbjct: 1034 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERVQEA 855
Query: 237 DEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDL 273
EE+ RM +L D++ +++F NK+DL
Sbjct: 854 REELTRMLNEDELRDAV----------LLVFANKQDL 774
>10862
Length = 2896
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = -3
Query: 191 FKELYFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLF 250
+E F ++DVGGQ R W H + G +IF V +D D + +E++R
Sbjct: 2495 LQECQFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHR-------- 2340
Query: 251 DSICNNKWFTDTSIILFLNKKDL 273
I N++ D I++F NK+DL
Sbjct: 2339 --IINDREMRDAIILIFANKQDL 2277
>18949
Length = 414
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 180 KTTGIVETH-FTFKELYFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDE 238
+ TG+ + + + F FD+GG R R+ W F V I+F V + D +
Sbjct: 12 RPTGLPTSEELSMGGMTFTTFDLGGHRQARRVWKDYFPAVDGIVFIVDVHDTE------- 170
Query: 239 EMNRMHESMKLFDSICNNKWFTDTSIILFLNKKD 272
R+ E+ DS+ + D +++ NK D
Sbjct: 171 ---RITEAKAELDSLLRDDQIADIPVLVLGNKMD 263
>11378
Length = 1688
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Frame = +3
Query: 159 LDRISQTNYIPT-QQDVLRTRVKTTGIVETHFTFKELYFKMFDVGGQRSERKKWIHCFEG 217
LD +T + + D + V T + + F FD+GG R R+ W F
Sbjct: 345 LDNAGKTTLLHMLKDDKMAQHVPTLHPTSEELSMGGMRFTTFDLGGHRQARRVWKDYFPA 524
Query: 218 VTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKD 272
V I+F V + D + R+ E+ DS+ ++ + I++ NK D
Sbjct: 525 VDGIVFLVDVHDRE----------RLVEAKAELDSLMTDEQVANAPILVLGNKID 659
>18208
Length = 458
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 192 KELYFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSD 229
K ++D+GGQR R W + FE +I+ + SD
Sbjct: 176 KGFKLNVWDIGGQRRIRPYWKNYFENTDLLIYVIDSSD 63
>15546
Length = 1563
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +3
Query: 110 LAGSAEEGVMT-SELAGVIKRLWRDGGVQACFSRSRE-YQLNDSASYYL 156
+ G EEG + S+++GV+ R+W G VQ F + + + L+D + L
Sbjct: 24 IVGVTEEGAQSESQVSGVVSRIW-PGSVQVAFEENEDVFSLDDDKPFRL 167
>08297
Length = 541
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 319 VYTHFTCATDTKNVQFVFDAVTDVIIKNNLKECG 352
++ HFTCAT K FV +T +I+ N E G
Sbjct: 5 IFHHFTCATPRKKSPFVVCFITQIILINYDHEAG 106
>20750
Length = 541
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 122 ELAGVIKRLWRDGGVQACFSRSREYQLNDSASYYLNDLDRISQTNYIPTQQDVLRTRV 179
E G+IK + G + S QLN + +Y+L D S TN +P D L+ V
Sbjct: 429 EKGGIIKTMENLGHKTLPYKMSMHGQLNSTGNYFLVHFD--SSTNALPDVHDELKRDV 262
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|33859640|ref|NP_035658.1| transaldolase 1 [Mus
musculus]
(337 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13340 214 e-102
09812 69 2e-12
06638 32 0.47
38660 31 0.64
>13340
Length = 934
Score = 214 bits (545), Expect(3) = e-102, Method: Compositional matrix adjust.
Identities = 98/146 (67%), Positives = 121/146 (82%)
Frame = -1
Query: 69 GKKLGGPQEEQIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIEL 128
G + G +EEQ+ NA+DK+ + FG +IL+ IPGRVSTEVDARLSFDK+ MV +A++LIEL
Sbjct: 847 GPRKRGSEEEQLSNAMDKVCINFGRKILEIIPGRVSTEVDARLSFDKEGMVKKAKQLIEL 668
Query: 129 YKEAGVGKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISP 188
YK GVGK+RILIKLSSTWEG+QA +ELE ++GIHCNMTL+F+F QA+AC EA TLISP
Sbjct: 667 YKAEGVGKERILIKLSSTWEGVQAARELESKYGIHCNMTLIFNFHQAIACGEAKATLISP 488
Query: 189 FVGRILDWHVANTDKKSYEPQEDPGV 214
FVGRI DW V N D+KS+EP +DPG
Sbjct: 487 FVGRIFDWFVKNKDQKSFEPLDDPGC 410
Score = 150 bits (378), Expect(3) = e-102, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 88/117 (75%)
Frame = -3
Query: 214 VKSVTKIYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGELLKDNSKLAPA 273
V+SVT IYNYYKKFGYKT+VMGASFRNTG+I LAGCD LTISP LL +L + +
Sbjct: 413 VRSVTXIYNYYKKFGYKTVVMGASFRNTGQIMGLAGCDLLTISPGLLEKLSQSTDSVEVY 234
Query: 274 LSVKAAQTSDSEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAADAIKLERMLTERM 330
L+ A D +++ +DEK FRW NED+MA +KL++GIRKFA DA+KLE ML ER+
Sbjct: 233 LNKDKAADLDIDQVTVDEKVFRWQMNEDEMANDKLAEGIRKFAVDAVKLENMLKERL 63
Score = 48.5 bits (114), Expect(3) = e-102, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -3
Query: 41 DATTNPSLILAAAQMPAYQELVEEAIAYGKKLG 73
DATTNPSLI AA+ MPAYQ L++ AI + K+ G
Sbjct: 929 DATTNPSLIFAASSMPAYQSLIDNAIDWAKEKG 831
>09812
Length = 400
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = -2
Query: 44 TNPSLILAAAQMPAYQELVEEAIAYGKKLGGPQEEQIKNAIDKLFVLFGAEILKKI 99
TNPSLI AA+ MPAYQ L++ AI + K+ GG +EEQ+ NA+DK+ + FG +IL+ I
Sbjct: 168 TNPSLIFAASSMPAYQSLIDNAIDWAKEKGGSEEEQLSNAMDKVCINFGRKILEII 1
>06638
Length = 2408
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +2
Query: 137 DRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDW 196
D+I+++L S E Q ++L E L+ F + A + FVGR+
Sbjct: 749 DKIVVRLXSELETYQKEEKLSEDQAFEIGKYLILQFRGLFSNAHRFAKAVEDFVGRLHGG 928
Query: 197 HVANTDKKSYEPQE 210
D+ + PQE
Sbjct: 929 QNGGADENNGGPQE 970
>38660
Length = 744
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 52 AAQMPAYQELVEEAIAYGKKLGGPQEEQIKNAIDKLFVLFGAEILKKIPGRVS-TEVDAR 110
+ Q Y+ LV + Y + PQ++ ++ ++DK+ IL S TE+ +R
Sbjct: 425 STQTTCYKGLVRPVLEYVSSVWDPQQQYLQTSLDKVQRRSARRILHDFSLTSSATELVSR 604
Query: 111 LSFDKDAMVARARRLIELYKEAG 133
L+ D + A R +YK G
Sbjct: 605 LNLDPLSFRRTAARATMMYKIMG 673
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|41235738|ref|NP_958745.1| tumor suppressing
subtransferable candidate 1 [Mus musculus]
(386 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
15745 253 e-102
21476 119 1e-27
03387 67 2e-11
01768 53 2e-07
04395 40 0.001
12806 39 0.004
16105 38 0.006
19498 38 0.008
26939 38 0.009
01805 37 0.009
07781 37 0.013
20662 37 0.019
17602 35 0.041
10264 35 0.049
02960 35 0.068
30256 34 0.080
27475 34 0.082
12140 34 0.083
27465 34 0.091
00561 34 0.12
19949 33 0.22
09883 33 0.23
31474 32 0.48
01598 32 0.55
16199 31 0.66
33180 31 0.85
17598 31 0.92
12960 31 1.1
04358 30 2.0
12574 30 2.0
00825 30 2.1
37142 30 2.1
19863 29 3.1
21763 28 4.9
20271 28 6.0
13890 28 9.2
>15745
Length = 1183
Score = 253 bits (645), Expect(3) = e-102, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 158/216 (73%)
Frame = +2
Query: 63 QAGEIWHISASPADKGVLATCYNKTTDSRVQACAAVWRMPKELESGSHESPDDPASTAQT 122
Q GE+WHISA+ D +LATCYNKT++S+ + AAVWR+P +++ S DD +S+ +
Sbjct: 224 QGGEVWHISAATFDSSLLATCYNKTSESKSELRAAVWRLPGDVDPSS--PADDQSSSHSS 397
Query: 123 LELLCHLDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGR 182
L LCHL +S+ +V ++W P GD + V+ + + +++WDL +SS A TLEG+
Sbjct: 398 LLPLCHL-HSSDHDVKGILWHPTGDSQTVLGVCEDRVIMWDLNVASSSAQQTDMITLEGK 574
Query: 183 GQLKFTAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQY 242
GQ + T GRW+PHHNC Q+ATA++ T+RGWD RS Q Y +E AHGQLVRDLDFNPN+QY
Sbjct: 575 GQPRLTCGRWNPHHNCAQIATANEATIRGWDLRSKQQTYQMEGAHGQLVRDLDFNPNRQY 754
Query: 243 YLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSV 278
YLASCGDDC+VKFWDTRN +EP+K L +HSHWVW
Sbjct: 755 YLASCGDDCRVKFWDTRNCSEPLKVLSDHSHWVWGC 862
Score = 109 bits (273), Expect(3) = e-102, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Frame = +1
Query: 278 VRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDVSDPEEHHAEKSKEPLQDN 337
VRYNH HDQLVLT SSDSRVIL+N+V++SSEP+GHL+D DD SD + H E+ +EP D
Sbjct: 859 VRYNHFHDQLVLTSSSDSRVILNNVVTLSSEPYGHLLDKDDDSDSDSLH-ERPQEPPTDG 1035
Query: 338 VIATYEEHEDSVYAVDWASADPWLFASLS 366
VIATYEEHEDSVYAV W++ADPW+F L+
Sbjct: 1036VIATYEEHEDSVYAVAWSTADPWVFLRLA 1122
Score = 48.1 bits (113), Expect(3) = e-102, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 359 PWLFASLSYDGRLVINRVPRALKYHILL 386
P F+SLSYDGRLVINRVPRA KY ILL
Sbjct: 1098 PLGFSSLSYDGRLVINRVPRAEKYKILL 1181
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Frame = +3
Query: 1 MEDDAPVIYGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQXXXXXXXXXXXXXXKNVL 60
MED+APVIYGLEFQAR+LT QTAETD IRFLVGTQSL+ +NQ KNV
Sbjct: 39 MEDEAPVIYGLEFQARSLTAQTAETDRIRFLVGTQSLRSENQVHHIDFDDENNVINKNVF 218
Query: 61 LHQAGEIWH--------ISASPADKGVLATCYNKTTDSRVQACAAVW 99
LH+ G +S+ PA N++ + R C W
Sbjct: 219 LHREGRYGTSVLPPSTALSSQPATTKRQRA--NQSCERRCGGCRVTW 353
>21476
Length = 431
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 82/117 (70%)
Frame = +3
Query: 270 EHSHWVWSVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDVSDPEEHHAEK 329
+HSHWVWSVR+N HDQL+L+ SSD +V+L+ S+SSE G + + +E H
Sbjct: 9 DHSHWVWSVRFNTFHDQLILSSSSDCKVLLTCAGSVSSETQGTETGEVGAAVNQERH--- 179
Query: 330 SKEPLQDNVIATYEEHEDSVYAVDWASADPWLFASLSYDGRLVINRVPRALKYHILL 386
+ L D ++ T+++HEDSVY +W++ DPW+FASLSYDGR++I++VP+ KY I+
Sbjct: 180 --KVLSDGLLQTFDQHEDSVYCAEWSNVDPWIFASLSYDGRVLISKVPKQYKYQIIF 344
>03387
Length = 1891
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 2/234 (0%)
Frame = +1
Query: 142 WEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKFTAGRWSPHHNCTQV 201
W P +G + + D I LWD+ + ++ + + T+ W H
Sbjct: 385 WNPNLNGHLLSASDDHTICLWDINSTQRESRVVDAHTIFTGHTSVVEDVAWHLLHESLFG 564
Query: 202 ATASDTTLRGWDTRS--MSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTR 259
+ A D L WDTRS S+ + +AH V L FNP ++ LA+ D V WD R
Sbjct: 565 SVADDQKLMIWDTRSNTTSKPSHVVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 744
Query: 260 NVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDV 319
N+ + + E H ++ V+++ ++ ++ + +D R+ + ++ I E L +D +
Sbjct: 745 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE---QLPEDAED 915
Query: 320 SDPEEHHAEKSKEPLQDNVIATYEEHEDSVYAVDWASADPWLFASLSYDGRLVI 373
PE ++ + H + W +PW+ S+S D + +
Sbjct: 916 GPPE--------------LLFIHGGHTAKISDFSWNPNEPWIVCSVSEDNIMQV 1035
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 30/168 (17%)
Frame = +1
Query: 234 LDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHW------VWSVRYNHSHDQL 287
L +NPN +L S DD + WD + + ++ H+ + V V ++ H+ L
Sbjct: 379 LSWNPNLNGHLLSASDDHTICLWDINSTQRESRVVDAHTIFTGHTSVVEDVAWHLLHESL 558
Query: 288 VLTGSSDSRVILSNMVSISSEPFGHLVDDDDVSDPEEHHAEK---SKEPLQDNVIAT--- 341
+ + D ++++ + S ++ H+VD H AE S P + ++AT
Sbjct: 559 FGSVADDQKLMIWDTRSNTTSKPSHVVD--------AHTAEVNCLSFNPYSEFILATGSA 714
Query: 342 ------------------YEEHEDSVYAVDWASADPWLFASLSYDGRL 371
+E H+D ++ V W+ + + AS D RL
Sbjct: 715 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 858
>01768
Length = 1424
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Frame = +3
Query: 191 RWSPHHNCTQVATASDTTLRGWDTR---SMSQIYCIENAHGQLVRDLDFNPNKQYYLASC 247
+WSP+ + + D TLR W+T+ S + + + AH + + +++NP +++ LAS
Sbjct: 858 QWSPNEGNVFASCSVDRTLRIWNTQQKPSKANVLTVPEAHSRDINVINWNPIEKHLLASG 1037
Query: 248 GDDCKVKFWDTRNV-TEPVK---TLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299
GDD +K WD R +PV + + HS V S+ +N ++ D ++ +
Sbjct: 1038GDDGIIKIWDLRMFRNKPVSAQASFKLHSQPVTSLEWNPQDSSVLAASGEDDQITI 1205
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 4/126 (3%)
Frame = +3
Query: 136 NVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKFTAGRWSPH 195
+V V W P D + +W+ Q S+A + + R W+P
Sbjct: 843 SVEDVQWSPNEGNVFASCSVDRTLRIWNTQQKPSKANVLTVPEAHSR---DINVINWNPI 1013
Query: 196 HNCTQVATASDTTLRGWDTRSMSQIYCIENA----HGQLVRDLDFNPNKQYYLASCGDDC 251
+ D ++ WD R A H Q V L++NP LA+ G+D
Sbjct: 1014EKHLLASGGDDGIIKIWDLRMFRNKPVSAQASFKLHSQPVTSLEWNPQDSSVLAASGEDD 1193
Query: 252 KVKFWD 257
++ WD
Sbjct: 1194QITIWD 1211
>04395
Length = 1145
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 209 LRGWDTRSMS----QIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEP 264
L+ +D R S QI+ + H L+ +D +P + + +A+ D + WD R+ P
Sbjct: 408 LKLFDVRQNSDEPAQIFSATDDHWSLLC-VDKHPGQLHIVATGSQDGTLTVWDLRHHRFP 584
Query: 265 VKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRV 297
+ TL+ H +W VR++ H + T S D +
Sbjct: 585 MTTLDAHHSSMWEVRFHQQHTPHLFTCSEDGSL 683
>12806
Length = 961
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Frame = +3
Query: 156 DSHILLWDLQPSSS----QAVLASSATLEGRGQLKFTAGRWSPHHNCTQVATASDTTLRG 211
D++I++WDL P Q TL G F + + ++++ D TLR
Sbjct: 72 DNNIIVWDL*PKKDGDEDQTWGVPRKTLTGHSH--FISDLALSADSRFALSSSWDATLRL 245
Query: 212 WDTRSMSQIYCIENAHGQLVRDLDFNP-NKQYYLASCGDDCKVKFWDTRNVTEPVKTLEE 270
WD + S N H + V + F+P N+Q +AS G D +K W+ +
Sbjct: 246 WDIKKGSTTSRFIN-HTRDVLTVAFSPDNRQ--IASGGRDKNLKIWNIMGECKYTVDANA 416
Query: 271 HSHWVWSVRYNHSHDQLVLTGSSDSRVI 298
H+ WV VR++ ++ +S+ + I
Sbjct: 417 HTDWVTCVRFHQDTKNPIVVSASNDKTI 500
>16105
Length = 960
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = -2
Query: 226 AHGQLVRDLDFNPNKQYYLASCGDDCKVKFWD------TRNVTEPVKTLEEHSHWVWSVR 279
H V D+ + P+ +AS DDC VK W N+T+PV L H +
Sbjct: 581 GHKGAVLDIQWCPHNDNVIASASDDCTVKVWQIPDSGLVTNLTDPVVDLVGHQKRCCLIV 402
Query: 280 YNHSHDQLVLTGSSDSRVILSNM 302
++ S ++++ +D++++ N+
Sbjct: 401 WHPSAQNVLVSAGADNKILFWNV 333
>19498
Length = 903
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
Frame = -1
Query: 124 ELLCHLDNSAQGNVACVVWEPMGDGKKVISLADSH-ILLWDLQPS-SSQAVLASSATL-- 179
+LC +D S G V CV W +GK + S D I++W + S S+ T+
Sbjct: 813 RVLCQMD-SHLGCVNCVRWSE--NGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILE 643
Query: 180 --EGRGQLKFTAG-----RWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVR 232
L+ AG WSP + + + D T+ W+ S+ + H +V+
Sbjct: 642 HWRSVATLRGHAGDVLDLAWSPQ-DLWLASCSVDNTIVVWNALKFSEQVAVIRGHAGMVK 466
Query: 233 DLDFNPNKQYYLASCGDDCKVKFWDTRNVTE 263
+ ++P +Y LAS DD ++ W T + E
Sbjct: 465 GVTWDPVGRY-LASQSDDKTLRVWRTSDWKE 376
>26939
Length = 388
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 243 YLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRV 297
YL S DD ++ WD RN +KTL H H+ S+ ++ +H V++GS D V
Sbjct: 8 YLVSASDDKTIRVWDLRN-KRCMKTLYAHQHFCTSIDFHKAH-PYVISGSVDQTV 166
>01805
Length = 2124
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = -1
Query: 226 AHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHD 285
H Q V DL +N N ++ LAS D V WD + +HS V ++ +
Sbjct: 582 GHTQAVLDLSWNRNARHVLASASADTTVALWDLSE-GKMAMNFTQHSREVQCCNWHPQEE 406
Query: 286 QLVLTGSSDSRV 297
Q +LTGS D+ V
Sbjct: 405 QTLLTGSFDNTV 370
>07781
Length = 1269
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 18/130 (13%)
Frame = -2
Query: 244 LASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVILSNMV 303
+ S DDCK+K WD R T PV T + V S++ + L+ GS D + L +
Sbjct: 746 IYSGSDDCKLKVWDLRVGTTPVLTNSRFTMGVTSIQSCPQREHLLAVGSYDENLRLFDTR 567
Query: 304 SISSEPFGHLVDDDDV----SDP------------EEHHAEKSKEPLQD--NVIATYEEH 345
+ +P + V DP H S +P +D V++ Y H
Sbjct: 566 HM-RQPLSTTALEGGVWRVKWDPFXARYVLTATMHNGFHIVDSSKPEEDCLRVVSHYTNH 390
Query: 346 EDSVYAVDWA 355
Y VDW
Sbjct: 389 TSLAYGVDWC 360
>20662
Length = 1220
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = +2
Query: 156 DSHILLWDLQPSSSQAVLASSATLEGRGQLKFTAGRWSPHHNCTQVATASDTTLRGWDTR 215
D I+LWD++ S L ++ K T +W P+ + D R
Sbjct: 575 DGKIVLWDVRESKPATCLPKCSS-----GFKPTCVQWQPNARNMYAVGDEGGHVSVQDLR 739
Query: 216 SMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCK 252
+ + +H ++V L F P + LAS G+DCK
Sbjct: 740 MVVEKNVSYQSHNRVVTRLAFCPQRPSMLASIGEDCK 850
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%)
Frame = +2
Query: 149 KKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKFTAGRWSPHHNCTQVATASDTT 208
K ++ L + LW+LQ + SSA + H+ ++ + D
Sbjct: 290 KVLVGLDTGGVALWELQDEDKMFSMLSSACEHDDMTASVSINSDXSHY----LSASYDHG 457
Query: 209 LRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTL 268
++ W+T ++ +Y AH +V D+ +P + SC D K+ WD R ++P L
Sbjct: 458 IKVWNT-DLTSLYTYR-AHSDIVWDVQCHPTEPALFLSCSQDGKIVLWDVRE-SKPATCL 628
Query: 269 EEHS 272
+ S
Sbjct: 629 PKCS 640
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 339 IATYEEHEDSVYAVDWASADPWLFASLSYDGRLVI 373
+ TY H D V+ V +P LF S S DG++V+
Sbjct: 488 LYTYRAHSDIVWDVQCHPTEPALFLSCSQDGKIVL 592
>17602
Length = 481
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +3
Query: 201 VATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRN 260
V+++ D R WDT S + + + V + F+PN +Y LA+ D+ +K WD
Sbjct: 102 VSSSYDGLCRIWDTASGQCLXTLIDDDNPPVSFVKFSPNGKYILAATLDN-TLKLWDYSK 278
Query: 261 VTEPVKTLEEHSHWVWSVRYNHS--HDQLVLTGSSDSRVILSNMV 303
+ +KT H + + + N S + +++GS D+ V + N++
Sbjct: 279 -GKCLKTYVGHRNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLL 410
>10264
Length = 416
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = -1
Query: 225 NAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSH 284
+ H Q V D+ ++P+ L S G D + WD + T + + H + + +++
Sbjct: 254 SGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGT-ALAQFKGHMGRLLTCQFSGLD 78
Query: 285 DQLVLTGSSDSRV 297
LV+TG SD+ V
Sbjct: 77 PDLVMTGGSDASV 39
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 36/93 (38%)
Frame = -1
Query: 172 VLASSATLEGRGQLKFTAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLV 231
+L S L G Q + T WSPHH+ V+ D WD + + + + G+L+
Sbjct: 278 ILTSLRELSGHSQ-RVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLL 102
Query: 232 RDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEP 264
F+ + + G D V W P
Sbjct: 101 -TCQFSGLDPDLVMTGGSDASVHVWRVSQQAAP 6
>02960
Length = 1577
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%)
Frame = +2
Query: 220 IYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVR 279
+ C +H V +D++P +++ S D +K WDTR+ + + H + +V
Sbjct: 1190 VKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHEDRILAVD 1369
Query: 280 YNHSHDQLVLTGSSDSRVILSNMVSISSEPFG 311
+ S +L+L+G D+++ ++ S SS G
Sbjct: 1370 W--SIPELLLSGGVDNKL---HVFSYSSAKLG 1450
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 19/138 (13%)
Frame = +2
Query: 264 PVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVILSNM---------------VSISSE 308
PV TL H+ V +VR+ H V+T S D + L ++ + ++
Sbjct: 935 PVLTLSGHAEAVSAVRWLDPHR--VVTSSWDHSLRLWDLHTAQQTSLIQGSKAVLDVAYS 1108
Query: 309 PFGHLVDDDDVSDPEEHHAE--KSKEPLQDNVIATYEEHEDSVYAVDWASADPWLFASLS 366
P H++ ++ + H + + V + H V VDW+ LF S S
Sbjct: 1109 PLSHML----ITGSADRHVRLVDPRCSEGETVKCAFTSHTGWVTGVDWSPTREHLFLSGS 1276
Query: 367 YDGRLVI--NRVPRALKY 382
YD L + R P+A Y
Sbjct: 1277 YDNVLKLWDTRSPKATLY 1330
>30256
Length = 961
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Frame = +3
Query: 141 VWEPMGDGKKVISLA-DSHILLWDLQPSSSQAVLASSATLEGRGQLKFTAGRWSPHHNCT 199
V+ DG V+S + D+ I +WD++ L +L +LK +
Sbjct: 411 VYSLQFDGVYVVSGSLDTSIRVWDVRCGKLVHTLMGHQSLTSGLELK----------DNL 560
Query: 200 QVATASDTTLRGWD--TRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWD 257
V+ +D+T++ WD T Q N H V L FN + ++ +C DD VK WD
Sbjct: 561 LVSGNADSTVKVWDVHTGKCLQTLLGPNKHRSAVTCLQFN---KKFVVTCSDDGTVKLWD 731
Query: 258 --TRNVTEPVKTLEEHSHW--VWSVRYNHS 283
T + + TL VW +R N++
Sbjct: 732 LNTGDFIRNLITLPSGGSGGVVWRLRCNNT 821
>27475
Length = 369
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%)
Frame = +2
Query: 220 IYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVR 279
+ C +H V +D++P +++ S D +K WDTR+ + + H + +V
Sbjct: 44 VKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHEDRILAVD 223
Query: 280 YNHSHDQLVLTGSSDSRVILSNMVSISSEPFG 311
+ S +L+L+G D+++ ++ S SS G
Sbjct: 224 W--SIPELLLSGGVDNKL---HVFSYSSAKLG 304
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 336 DNVIATYEEHEDSVYAVDWASADPWLFASLSYDGRLVI--NRVPRALKYHI 384
+ V + H V VDW+ LF S SYD L + R P+A Y +
Sbjct: 38 ETVKCAFTSHTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDM 190
>12140
Length = 727
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Frame = +2
Query: 226 AHGQLVRDLDFNPN---KQYYLASCGDDCKVKFW--DTRNVTEPVKTLEEHSHWVWSVRY 280
H VRD+ + P+ + +ASC DC+V W D + + L + S VW V +
Sbjct: 350 GHSDWVRDVAWAPSIGLPRNVIASCSQDCRVIIWTNDGSSNQWTSRILNKFSDVVWHVSW 529
Query: 281 NHSHDQLVLTGSSDSRVILSN--------MVSISSEPFGHLVDDDDVSDP---EEHHAEK 329
+ + + L ++G D++V L +S ++ GH+ D S+P E
Sbjct: 530 SVTGNILAVSG-GDNKVTLWKESVEGQWTCISDVNKGQGHITDQRSSSEPSYNSRRRIEL 706
Query: 330 SKEPLQ 335
K+P Q
Sbjct: 707 *KKPSQ 724
>27465
Length = 658
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = -1
Query: 220 IYCIENAHGQLVRDLDFNPNKQYYLASCGD-DCKVKFWDTRNVTEPVKTLEEHSHWVWSV 278
++ + AH + ++ FN + ++ D CK+ WDT + E + TLE H + V+++
Sbjct: 385 LFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKI--WDTASA-EELHTLEGHRNVVYAI 215
Query: 279 RYNHSHDQLVLTGSSDSRVIL 299
+N+ V+TGS D L
Sbjct: 214 AFNNPFGDKVITGSFDKTCKL 152
>00561
Length = 1003
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = -3
Query: 147 DGKKVISLA-DSHILLWDLQPSSSQAVLASSATLEGRGQLKFTAGRWSPHHNCTQVATAS 205
DG +S + D + LWDL A T G K N V+ +
Sbjct: 833 DGNYALSGSWDQTLRLWDLA--------AGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 678
Query: 206 DTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPN-KQYYLASCGDDCKVKFWDTRNV 261
D T++ W+T + + E+ H V + F+PN + SCG D VK W+ N
Sbjct: 677 DKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANC 507
>19949
Length = 903
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Frame = +2
Query: 185 LKFTA-GRWSPHHNCTQVATAS-DTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQY 242
L+F+ GRW +A+AS D ++ WD + ++ H V ++F+P+ ++
Sbjct: 137 LRFSPDGRW--------IASASEDGLVKLWDL-TAGKLLTDLKLHRDAVNTIEFHPH-EF 286
Query: 243 YLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVI---- 298
LAS D VKFWD + + T E ++ + S+ + H + +GS D+ +
Sbjct: 287 LLASGSADRTVKFWDLETF-QLISTTEPEANSIRSILF-HPDGVCLYSGSKDTLKVYHWE 460
Query: 299 ---LSNMVSISSEPFGHLVD 315
L + VS+ P+G + D
Sbjct: 461 PLELYDTVSV---PWGQVCD 511
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 231 VRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYN 281
V+ LDF+P Y AS DC VK WD R + T + H+ V +R++
Sbjct: 2 VKSLDFHPYGAY-TASGSMDCNVKLWDIRR-KGCIYTYKGHTGCVCCLRFS 148
>09883
Length = 650
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 169 SQAVLASSATLEGRGQLKFTA-GRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAH 227
++ + + TLEG + + GR VA S +++ WD + +++ + + H
Sbjct: 9 AKLLFSGPVTLEGASLIALSPDGR--------TVAICSQSSVVFWDAVACEEMHTLHSLH 164
Query: 228 GQLVRDLDFNPNKQYYLASCGD 249
+ + L F+ N +YL +CGD
Sbjct: 165 AEPITALAFD-NSNHYLVTCGD 227
>31474
Length = 403
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 55/140 (39%)
Frame = -3
Query: 216 SMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWV 275
++ ++ C+ +AH + + +NP LASCG D +K W +E +WV
Sbjct: 338 TLEEVCCL-SAHDEHAWCVAWNPTGTL-LASCGSDKIIKIWG-----------KEGDNWV 198
Query: 276 WSVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDVSDPEEHHAEKSKEPLQ 335
+H + V S+ P G+ + A S++ +
Sbjct: 197 CKSTLTDAHTRTVR--------------SLGWSPCGNYLSSASFDATT---AVWSRKGGE 69
Query: 336 DNVIATYEEHEDSVYAVDWA 355
IAT E HE+ V AV WA
Sbjct: 68 FECIATLEGHENEVKAVAWA 9
>01598
Length = 1545
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 36/93 (38%)
Frame = +1
Query: 172 VLASSATLEGRGQLKFTAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLV 231
+L S L G Q + T WSPHH+ V+ D WD + + + + G+L+
Sbjct: 1267 ILTSLRELSGHSQ-RVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLL 1443
Query: 232 RDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEP 264
F+ + + G D V W P
Sbjct: 1444 T-CQFSGLDPDLVMTGGSDASVHVWRVSQQAAP 1539
>16199
Length = 694
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 242 YYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHW-VWSVRYNHSHDQLVLTGSSDSRVIL 299
YYLA+ +D VK WD R + + KTL+ + V ++ ++ S L + G SD RV L
Sbjct: 235 YYLATSAEDSVVKLWDLRKL-KNFKTLQLGDKYEVKALCFDQSGTYLAVAG-SDVRVYL 405
>33180
Length = 460
Score = 30.8 bits (68), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = -2
Query: 197 NCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFW 256
N V A+D L +D S + I+ AH V + F + L S GDD K W
Sbjct: 417 NTEIVGGANDGCLYVYDRESNQRTLKID-AHDDDVNAVAFADDSSQILYSGGDDGLCKVW 241
Query: 257 DTRNVTE----PVKTLEEHSHWV 275
D R + E PV + HS V
Sbjct: 240 DRRTLREDNPLPVGIMAGHSDGV 172
>17598
Length = 875
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Frame = +1
Query: 201 VATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNP-NKQYYLASCGDDCKVKFWDTR 259
++++ D TLR WD + + +H + + F+P N+Q +AS G D +K W+T
Sbjct: 169 LSSSWDATLRLWDIKKGNTTRRFI-SHTRDALAVAFSPDNRQ--IASGGRDKALKIWNT- 336
Query: 260 NVTEPVKTLEEHSH--WVWSVRYNH-SHDQLVLTGSSDSRVIL--SNMVSISSEPFGHL- 313
V E T++ +SH WV V+++ + LV++ S D + + + +++ GH
Sbjct: 337 -VGECKFTVDANSHQDWVTCVKFHQDAKSPLVVSASMDKTIKVWDNQTMTLKHTFVGHKT 513
Query: 314 -VDDDDVSDPEEHHAEKSKEP------LQDNVIATYEEHEDSVYAVDWASADPWLFASLS 366
++ D++ + A SK+ +Q+ + + V AV ++ WLF S
Sbjct: 514 QINAIDLALKTYYLASGSKDGIVMTWNIQNGTFLGKIDCDCEVNAVKFSPNKYWLFVGTS 693
>12960
Length = 550
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +2
Query: 225 NAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSH 284
N Q VR + F+ + +Y + +CG D VK W+ +KT H H V + + +
Sbjct: 164 NCKQQAVRAVRFSVDSRYCM-TCGSDKSVKLWNPHR-ELFLKTYIGHGHEVLDAQGSGDN 337
Query: 285 DQLVLTGSSDSRVILSNMVS 304
Q + +G D V+L ++ S
Sbjct: 338 SQ-ICSGGIDKTVVLFDVAS 394
>04358
Length = 2430
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +1
Query: 206 DTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTE 263
D L WD R + C E++H + + F P + L + D V +D TE
Sbjct: 1639 DAYLLFWDRRKDKLLGCYEDSHHDDITQVHFGPTSEKTLLTGSTDGLVNVFDVMQTTE 1812
>12574
Length = 521
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Frame = +3
Query: 166 PSSSQAVLASSATLEGRGQLKFT---------AGRWSPHHNCTQVATASDTTLRGWDTRS 216
P+S+ + SSAT + LKFT A ++SP+ + ++A D ++ W
Sbjct: 105 PASATSGTKSSATQKPTYTLKFTLAGHTKALSAVKFSPNGDWLASSSA-DKLIKIWGAYD 281
Query: 217 MSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVW 276
I H + D+ ++ + + L S DD +K W+ + + +KTL+ HS++V+
Sbjct: 282 GKFEKTIA-GHKLGLSDVAWSSDSKL-LCSASDDKTLKIWE-FSTGKCMKTLKGHSNYVF 452
Query: 277 SVRYNHSHDQLVLTGS 292
+N L+++GS
Sbjct: 453 CCNFN-PQSNLIVSGS 497
>00825
Length = 1821
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = -2
Query: 204 ASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFW----DTR 259
A D L W+ Q+ C AH +V + + + QY+ SCG D +K W +
Sbjct: 1814 ACDGELICWNL-PKQQMACRVQAHDGIVHGMAAHSSGQYFF-SCGSDKTIKQWSLDPEGT 1641
Query: 260 NVTEPVKTL 268
EPV TL
Sbjct: 1640 IAPEPVNTL 1614
>37142
Length = 327
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Frame = +2
Query: 227 HGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPV------KTLEEHSHWVWSVRY 280
H V+ LDFNP + LAS + ++ WD P+ + EE S W+ +
Sbjct: 101 HTGAVKALDFNPFQTNLLASGASESEIYIWDLNKPDNPMTPGQKSQPPEEVSCVAWNRQV 280
Query: 281 NH 282
H
Sbjct: 281 QH 286
>19863
Length = 502
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +1
Query: 201 VATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRN 260
V+ +SD ++ WD + Q ++ H V D+ F+ + Q +L SC +D V+ W+
Sbjct: 19 VSGSSDMSIVVWDVENGVQKLRLQ-GHAGWVNDVHFSQD-QCWLLSCSNDNTVRIWNIEE 192
Query: 261 VTEPVKTLEEH 271
++ + + EH
Sbjct: 193 -SDQIPIVMEH 222
>21763
Length = 923
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 250 DCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVILSN 301
DCK ++D T+P K L H V V Y+H + L + S D +I+ +
Sbjct: 505 DCKSCWFDLDLSTKPYKILRHHKRAVRHVSYHHRYP-LFASASDDGSIIVCH 657
>20271
Length = 567
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 339 IATYEEHEDSVYAVDWASADPWLFASLSYDGRL 371
+ ++E++ D V V W+ +P LF+ + GRL
Sbjct: 162 VCSFEDNSDYVSDVQWSPTNPALFSCVDIMGRL 64
>13890
Length = 630
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 24/160 (15%)
Frame = +1
Query: 236 FNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTL--EEHSHWVWSVRYNHSHDQLVLTGSS 293
F+P + +A+ DC ++ WD R+ PV+ L +E V V ++H ++ G
Sbjct: 4 FHPVTPHLVATGTTDC-IQVWDVRHPEVPVRVLTHKEQLGQVQDVMFSHDGQEVFSCGDV 180
Query: 294 DSR---------------VILSNMV----SISSEPFGHLVDDDDVSDPEEHHAE--KSKE 332
SR VILSN + + H ++ + + ++
Sbjct: 181 VSRESSDRSIMAWDFRTGVILSNQIFQERYTVTRLMLHPYQSQFLAQTQAGYIAVFSTQR 360
Query: 333 PLQDNVIATYEEHEDSVYAVDWA-SADPWLFASLSYDGRL 371
P + N +E H+ + Y + + S D + S S DG+L
Sbjct: 361 PYKMNKNKRFEGHKTAGYNIGASLSQDGSIVYSGSSDGKL 480
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|46909607|ref|NP_631883.2| O-linked
N-acetylglucosamine transferase [Mus musculus]
(1046 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
20328 368 e-102
33552 77 3e-14
18426 63 5e-10
18279 56 1e-07
30337 49 7e-06
04645 43 7e-04
13793 43 8e-04
28154 42 0.001
27726 40 0.006
17595 39 0.007
35264 39 0.013
10994 37 0.052
35348 35 0.21
31632 30 4.1
00599 30 4.1
>20328
Length = 1143
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/277 (63%), Positives = 208/277 (75%)
Frame = -2
Query: 762 GDNPDSSNTALNMPVIPMNTIAEAVIEMINRGQIQITINGFSISNGLATTQINNKAATGE 821
G+ + + T + +PV + T+ MI Q Q + + NGL T Q NNKAATGE
Sbjct: 1127 GEVGEVTTTVVELPVAMVQTLQT----MITSSQPQCNVGTVLVQNGLTTNQTNNKAATGE 960
Query: 822 EVPRTIIVTTRSQYGLPEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV 881
EVPR ++++ R+QYGLPEDA+VYCNFNQLYKI+P+TL MW ILK+VPN VLWLLRFPAV
Sbjct: 959 EVPRCVVLSARAQYGLPEDAVVYCNFNQLYKIEPATLDMWVQILKQVPNGVLWLLRFPAV 780
Query: 882 GEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGT 941
GE NI Q A + GLP RI+FS VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGT
Sbjct: 779 GETNITQAATSFGLPAGRIVFSNVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGT 600
Query: 942 PMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQR 1001
PMVT PGETLASRVA+SQL LGC EL+A SR++Y IAV+LGTDLEYL+ ++ KV R
Sbjct: 599 PMVTFPGETLASRVASSQLHSLGCPELVANSREDYIRIAVQLGTDLEYLRGMQAKVSLAR 420
Query: 1002 ISSPLFNTKQYTMELERLYLQMWEHYAAGNKPDHMIK 1038
SSPLFNTK Y LE L+ QMW+ + PDH+ +
Sbjct: 419 KSSPLFNTKTYATNLETLFYQMWKQHERAGVPDHLTE 309
>33552
Length = 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 970 AKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHYAA 1029
A+SRQ+Y DIAVKLGT+L YL+ ++ KV R +SPLFNT+ YT LE LY +MW
Sbjct: 373 AQSRQDYVDIAVKLGTNLPYLRGMQAKVNLARSTSPLFNTRTYTQNLEDLYCRMWNQKQQ 194
Query: 1030 GNKPDHMIKPVEV 1042
++ DH+ EV
Sbjct: 193 QDEADHLTNNTEV 155
>18426
Length = 451
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +2
Query: 985 TDLEYLKKIRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHYAAGNKPDHM 1036
T+ EYLK +R KVWK R+ SPLF+ QY LE L+L+MW+ + +PDH+
Sbjct: 2 TEREYLKALRAKVWKARVDSPLFDCSQYAKGLENLFLRMWDRFHNNEEPDHI 157
>18279
Length = 706
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 16/219 (7%)
Frame = +3
Query: 171 GRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAY-- 228
G++ EA + +A++ + AWS +G + A+ E FE+ + DAY
Sbjct: 6 GQIYEASDWFKEALQINQDHPDAWSLIGSLHLAKQEWGPGQKKFERILQRTQTKDDAYSL 185
Query: 229 INLGNVL------------KEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLID 276
I LGNV KE R DRA+A Y + L P + + CV +G I+
Sbjct: 186 IALGNVWLQTLHQPMRDKDKEKRHQDRALAMYKQVLRNDPKNIWAANGIGCVLAHKGCIN 365
Query: 277 LAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTAL-RLCPTH-ADSLNNLA 334
+ D + + E F D + N+A+ E+ A Y AL + H + + LA
Sbjct: 366 ESRDVFAQVREATADFCDVWLNIAHIYVEQRQFVAAVQMYENALKKFSRNHNVEVMVYLA 545
Query: 335 NIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQ 373
+ G +++ KA V P N+A V Q+
Sbjct: 546 RAYYKCGKLQDCKTTLLKARHVAPHDTVLLYNIALVQQK 662
>30337
Length = 493
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%)
Frame = -1
Query: 164 GNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN 223
GN L A + E+A CY KAI PN A ++N + LA ++A+ LD N
Sbjct: 310 GNKLFAARKYEDAIHCYTKAIMKNPNTATYFTNRALCYIKLRNWELASQDCQRALELDRN 131
Query: 224 FLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGN 264
+ + LG L E ++D A+ ++A L+ + + G+
Sbjct: 130 LVKGHFFLGQALVELAMYDEAITHLMKAHDLAKDQKLNFGD 8
>04645
Length = 1075
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%)
Frame = +3
Query: 330 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR 389
L+N I + ++ E + + + + A+ + N A +G+L++A+ + +AI+
Sbjct: 351 LDNTGVITDDDEDMPEYADVNIEVTDDMIDQASDNRNQAMDAMAEGRLEDAIGFFTDAIK 530
Query: 390 ISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAI 449
+PT A Y+ G+ +M + A+ ++AI++NP A + HK G+ E+
Sbjct: 531 SNPTSALLYAKRGSAYLKMGKPKKAIHDCSKAIELNPDSAQGYKWRGKAHKLLGHWEESY 710
Query: 450 ASYRTALKLKPD 461
A KL D
Sbjct: 711 HDLTLACKLDYD 746
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +3
Query: 169 ALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAY 228
A GRLE+A + AI++ P A+ ++ G + G+ AIH KA+ L+P+ Y
Sbjct: 480 AEGRLEDAIGFFTDAIKSNPTSALLYAKRGSAYLKMGKPKKAIHDCSKAIELNPDSAQGY 659
Query: 229 INLGNVLK 236
G K
Sbjct: 660 KWRGKAHK 683
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +3
Query: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGY 126
RL+ + F T AIK NP A Y+ G+ Y + G+ ++AI A+ L PD GY
Sbjct: 489 RLEDAIGFFTDAIKSNPTSALLYAKRGSAYLKMGKPKKAIHDCSKAIELNPDSAQGY 659
>13793
Length = 754
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = +1
Query: 170 LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEI--WL-AIHHFEKAVTLDPNFLD 226
LGRLE+A A++ P+ A W N V N QG++ W + F A+ LD
Sbjct: 256 LGRLEQAVKMADVALKHLPSSASLWFN---VANVQGKLERWTDSEQSFLNAIRLDAREAR 426
Query: 227 AYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACV 268
++NLG + D+A AY AL SPN + NLA +
Sbjct: 427 YHLNLGVLYHRWGKLDQAEKAYQVALQYSPNDRTIQDNLAML 552
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%)
Frame = +1
Query: 70 RLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 129
RL+++ + +A+K P A + N+ NV + + ++ + + +A+RL ++NL
Sbjct: 262 RLEQAVKMADVALKHLPSSASLWFNVANVQGKLERWTDSEQSFLNAIRLDAREARYHLNL 441
Query: 130 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLK 168
G ++ A +AY ALQY+P+ ++ +L L K
Sbjct: 442 GVLYHRWGKLDQAEKAYQVALQYSPNDRTIQDNLAMLAK 558
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +1
Query: 341 GNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ---EALMHYKEAIRISPTFADA 397
G +E+AV++ AL+ P A+ N+A+V QGKL+ ++ + AIR+ A
Sbjct: 259 GRLEQAVKMADVALKHLPSSASLWFNVANV---QGKLERWTDSEQSFLNAIRLDAREARY 429
Query: 398 YSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHK 440
+ N+G + A + Y A+Q +P NLA + K
Sbjct: 430 HLNLGVLYHRWGKLDQAEKAYQVALQYSPNDRTIQDNLAMLAK 558
Score = 30.0 bits (66), Expect(2) = 0.16, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%)
Frame = +1
Query: 131 AALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
++ + G +E AV+ AL++ P + ++ N+ L R +++ +L AI
Sbjct: 241 SSWIILGRLEQAVKMADVALKHLPSSASLWFNVANVQGKLERWTDSEQSFLNAIRLDARE 420
Query: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN 223
A NLG +++ G++ A ++ A+ PN
Sbjct: 421 ARYHLNLGVLYHRWGKLDQAEKAYQVALQYSPN 519
Score = 23.5 bits (49), Expect(2) = 0.16, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 98 VYKERGQLQEAIEHYRHALRLKPDFIDGYIN 128
+Y E + QEA+ + +A LKP ++ + N
Sbjct: 141 LYLEEKRHQEALTAWHNATLLKPQHVNAWSN 233
Score = 31.6 bits (70), Expect(2) = 0.17, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +2
Query: 358 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 403
P FAAA NL V Q K EA Y I + D Y N+GN
Sbjct: 2 PIFAAAWMNLGIVQVQLKKYAEAERSYYTTISHRRNYPDCYYNLGN 139
Score = 22.3 bits (46), Expect(2) = 0.17, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1
Query: 443 GNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDE 484
G + +A+ ALK P + N+A+ + WTD ++
Sbjct: 259 GRLEQAVKMADVALKHLPSSASLWFNVANVQGKLERWTDSEQ 384
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 188 PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL 235
P FA AW NLG V + A + ++ N+ D Y NLGN +
Sbjct: 2 PIFAAAWMNLGIVQVQLKKYAEAERSYYTTISHRRNYPDCYYNLGNFV 145
>28154
Length = 374
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +1
Query: 159 VRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAV 218
V+ +LG L G +A C+ A++ +P A+ W+ LG G A+ + A+
Sbjct: 100 VQCNLGVLFNLSGEYNKAVDCFQAALQARPKDALLWNKLGATLANGGRSEEAVDAYHNAL 279
Query: 219 TLDPNFLDAYINLG 232
L P F+ + NLG
Sbjct: 280 QLSPGFIRSRYNLG 321
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 32/75 (42%)
Frame = +1
Query: 294 DAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353
D CNL G +A DC+ AL+ P A N L G EEAV Y A
Sbjct: 97 DVQCNLGVLFNLSGEYNKAVDCFQAALQARPKDALLWNKLGATLANGGRSEEAVDAYHNA 276
Query: 354 LEVFPEFAAAHSNLA 368
L++ P F + NL
Sbjct: 277 LQLSPGFIRSRYNLG 321
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = +1
Query: 311 EAEDCYNTALRLC----PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSN 366
E ++ Y +A+++ AD NL + G +AV ++ AL+ P+ A +
Sbjct: 34 EVQNLYLSAVQMAAPQESVDADVQCNLGVLFNLSGEYNKAVDCFQAALQARPKDALLWNK 213
Query: 367 LASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMG 402
L + L G+ +EA+ Y A+++SP F + N+G
Sbjct: 214 LGATLANGGRSEEAVDAYHNALQLSPGFIRSRYNLG 321
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Frame = +1
Query: 174 EEAKACYLKAIE-TQPNFAV---AWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYI 229
EE + YL A++ P +V NLG +FN GE A+ F+ A+ P +
Sbjct: 31 EEVQNLYLSAVQMAAPQESVDADVQCNLGVLFNLSGEYNKAVDCFQAALQARPKDALLWN 210
Query: 230 NLGNVLKEARIFDRAVAAYLRALSLSP-------NHAVVHGNLACV 268
LG L + AV AY AL LSP N + NL C+
Sbjct: 211 KLGATLANGGRSEEAVDAYHNALQLSPGFIRSRYNLGIACINLGCI 348
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Frame = +1
Query: 124 DGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKA 183
D NL +G+ AV + +ALQ P + + LG L GR EEA Y A
Sbjct: 97 DVQCNLGVLFNLSGEYNKAVDCFQAALQARPKDALLWNKLGATLANGGRSEEAVDAYHNA 276
Query: 184 IETQPNF-------AVAWSNLGCV 200
++ P F +A NLGC+
Sbjct: 277 LQLSPGFIRSRYNLGIACINLGCI 348
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +1
Query: 248 YLRALSLS-PNHAV---VHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL 303
YL A+ ++ P +V V NL ++ G + A+D ++ A++ +P + L L
Sbjct: 49 YLSAVQMAAPQESVDADVQCNLGVLFNLSGEYNKAVDCFQAALQARPKDALLWNKLGATL 228
Query: 304 KEKGSVAEAEDCYNTALRLCPTHADSLNNLA 334
G EA D Y+ AL+L P S NL
Sbjct: 229 ANGGRSEEAVDAYHNALQLSPGFIRSRYNLG 321
>27726
Length = 366
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -2
Query: 402 GNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKL 458
N L +++ A Y R I+I+P H+NL ++ IPEA+ SY+TA+ +
Sbjct: 350 ANVLGKLKQYMEAETLYKRVIEIDPRNMLYHTNLGVLYHRWEKIPEAMESYQTAISI 180
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = -2
Query: 334 ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393
AN+ + EA LY++ +E+ P H+NL + + K+ EA+ Y+ AI I+ +
Sbjct: 350 ANVLGKLKQYMEAETLYKRVIEIDPRNMLYHTNLGVLYHRWEKIPEAMESYQTAISINFS 171
Query: 394 FA-DAYSNMGNTLKEM 408
A A N+ +K +
Sbjct: 170 RATTARDNLNKLMKRL 123
>17595
Length = 483
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%)
Frame = -2
Query: 283 RRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN 342
+RA+ PH PD Y + G +A Y A+ L + ++ N A RE G
Sbjct: 326 KRALTYHPHLPDLYNFYGIVFHKTGQYEQAVASYERAVSLDNKFSHAMTNAAASLRELGR 147
Query: 343 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 385
EA ++A++ + A L + Q+ G+ Q+A+ ++
Sbjct: 146 HREAELFLKRAVDTTADLDAM-GQLGRLYQRMGRTQDAVNMFR 21
>35264
Length = 867
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +3
Query: 373 QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAH 432
Q K +EAL Y AI + P+ A Y N T ++ + L+ +A+Q++P F +
Sbjct: 75 QAAKYKEALECYTCAINLCPSCAAYYGNRAATYMMLKKYREGLKDAQQAVQLDPTFVKGY 254
Query: 433 SNLASIHKDSGNIPEAIASYRTALKL 458
H GN A +++ L+L
Sbjct: 255 IREGKCHLMLGNSMAASSNFNRVLEL 332
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 79 TLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYI 127
T AI P A Y N Y + +E ++ + A++L P F+ GYI
Sbjct: 111 TCAINLCPSCAAYYGNRAATYMMLKKYREGLKDAQQAVQLDPTFVKGYI 257
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 46/128 (35%)
Frame = +3
Query: 311 EAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370
EA +CY A+ LCP+ AA + N A+
Sbjct: 93 EALECYTCAINLCPS----------------------------------CAAYYGNRAAT 170
Query: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 430
K +E L ++A+++ PTF Y G + + A + R ++++ +
Sbjct: 171 YMMLKKYREGLKDAQQAVQLDPTFVKGYIREGKCHLMLGNSMAASSNFNRVLELDAGNST 350
Query: 431 AHSNLASI 438
A + L +
Sbjct: 351 AVTELKRV 374
>10994
Length = 2182
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Frame = -3
Query: 187 QPNFAVAWSNL-GCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 245
Q N V +S + G +G+ AI H A+ +DP +A + G V + +A+
Sbjct: 1670 QTNKQVHYSVVQGVEMVKKGQHLEAIQHLNLALKIDPLHTEALVARGAVYANNASYGKAI 1491
Query: 246 AAYLRALSLSPNHAVVHGNL-------ACVYYEQGLIDLAIDTYRRAIELQPHFP 293
+ +AL P H L A Y E+G I AI+ Y+ E + P
Sbjct: 1490 EDFEKALEGDPKHVNAKKYLMETKIASARRYEEEGNIXEAINNYKSRTEARRSVP 1326
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = -3
Query: 373 QQGKLQEALMHYKEAIRISPTFADA-------YSNMGNTLKEMQDVQGALQCYTRAIQIN 425
++G+ EA+ H A++I P +A Y+N + K ++D + AL+ + +
Sbjct: 1619 KKGQHLEAIQHLNLALKIDPLHTEALVARGAVYANNASYGKAIEDFEKALEGDPKHVNAK 1440
Query: 426 PAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFP 463
+ A +++ GNI EAI +Y++ + + P
Sbjct: 1439 KYLMETKIASARRYEEEGNIXEAINNYKSRTEARRSVP 1326
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Frame = -3
Query: 305 EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAH 364
+KG EA N AL++ P H ++L + + +A+ + KALE P+ A
Sbjct: 1619 KKGQHLEAIQHLNLALKIDPLHTEALVARGAVYANNASYGKAIEDFEKALEGDPKHVNAK 1440
Query: 365 SNL-------ASVLQQQGKLQEALMHYK---EAIRISP 392
L A +++G + EA+ +YK EA R P
Sbjct: 1439 KYLMETKIASARRYEEEGNIXEAINNYKSRTEARRSVP 1326
>35348
Length = 627
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = -2
Query: 305 EKGSVAEAEDCYNTALRLCP-----THADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359
+ G AEA + Y+ L +CP + L+N A + ++ + ++AV K++++ P
Sbjct: 548 KSGQYAEALELYSEGLDICPLKYVQQRSVMLSNRAACRIKKEDYQKAVGDCTKSIDLNPA 369
Query: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 410
+ A+ A ++ KL +AL +++ + + + D+ KE+++
Sbjct: 368 YIKAYFRRADAYEKLEKLDDALKDHRQVVEMDRSQIDSIQACLRLEKEIEE 216
>31632
Length = 390
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +1
Query: 642 YTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPH 701
+ K R++ FA + + + +PG + +MD + +QE+ ++ A H
Sbjct: 118 WKKSERHDHFASKNRLEKRKYTLHPGVTD--YMDRFLDEQESGALPGTLPGRDRSASPIH 291
Query: 702 TFFIGDHANMFPHLKK 717
+ GDH PHL++
Sbjct: 292 SLMYGDHKRSVPHLRQ 339
>00599
Length = 1505
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 445 IPEAIASYRTALKLKPDFPDAYCNL 469
IP+A+AS+R K +PD D+ C L
Sbjct: 68 IPDAVASFRDTNKCRPDTADSTCYL 142
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6753540|ref|NP_034104.1| casein kinase 2, alpha prime
polypeptide [Mus musculus]
(350 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03508 369 e-102
00638 131 2e-43
01060 114 4e-26
12704 107 8e-24
14126 102 3e-22
04138 96 2e-20
01707 95 4e-20
29581 94 7e-20
04591 94 1e-19
32000 87 1e-17
01756 82 4e-16
21079 73 2e-13
15910 72 3e-13
23319 71 6e-13
26560 70 1e-12
01392 68 5e-12
00300 65 6e-11
01966 64 9e-11
12786 64 1e-10
12721 63 2e-10
03294 60 2e-09
14420 59 2e-09
31885 59 4e-09
30755 59 4e-09
13212 57 8e-09
19761 57 1e-08
18287 57 1e-08
18921 57 1e-08
27405 57 1e-08
26711 57 2e-08
13592 55 5e-08
28638 55 6e-08
09606 54 8e-08
03240 54 1e-07
18484 54 1e-07
19094 53 2e-07
21433 52 3e-07
18401 50 1e-06
07940 46 3e-05
13078 45 4e-05
37602 45 4e-05
31489 44 1e-04
13066 43 2e-04
11185 42 3e-04
01718 42 3e-04
05084 42 3e-04
26009 42 4e-04
17975 42 5e-04
00715 41 7e-04
00392 40 0.001
12453 37 0.009
14116 37 0.009
27546 37 0.009
32359 28 0.010
06358 37 0.013
01106 36 0.019
18481 36 0.019
21800 35 0.031
28157 35 0.035
02638 35 0.052
20773 33 0.13
15931 33 0.19
35032 33 0.24
19301 33 0.24
26909 32 0.27
29590 30 0.98
14104 30 1.0
37063 30 1.1
17644 29 2.8
36481 29 3.1
18663 29 3.1
29360 29 3.6
37603 28 6.3
20152 28 7.0
12045 28 7.0
>03508
Length = 1463
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/234 (73%), Positives = 192/234 (82%)
Frame = +1
Query: 1 MPGPAAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINI 60
MP P SRARVYA+VN+ ++REYWDYE+HV WGNQDDYQ+VRKLGRGKYSEVFEAIN+
Sbjct: 487 MPLP---SRARVYADVNTHKAREYWDYESHVVEWGNQDDYQIVRKLGRGKYSEVFEAINV 657
Query: 61 TNNEXXXXXXXXXXXXXXXXXXXXXXXNLRGGTNIIKLIDTVKDPVSKTPALVFEYINNT 120
TNNE NLRGGTN+I L+ VKDPVS+TPAL+FE++NNT
Sbjct: 658 TNNEKCVIKILKPVKKKKIKREIKILENLRGGTNVITLLAIVKDPVSRTPALIFEHVNNT 837
Query: 121 DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA 180
DFKQLYQ TD+DIRFY+YEL+KALD+CHS GIMHRDVKPHNVMIDH+ KKLRLIDWGLA
Sbjct: 838 DFKQLYQTFTDYDIRFYLYELMKALDFCHSMGIMHRDVKPHNVMIDHENKKLRLIDWGLA 1017
Query: 181 EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 234
EFYHP EYNVRVASRYFKGPELL+DYQMYDYSLDMWSLGCM ASMIFRKEP
Sbjct: 1018EFYHPGMEYNVRVASRYFKGPELLLDYQMYDYSLDMWSLGCMFASMIFRKEPLL 1179
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/115 (72%), Positives = 96/115 (83%), Gaps = 3/115 (2%)
Frame = +2
Query: 217 WSLGCMLASM---IFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHIDLDPHFNDI 273
W+ G A + K PFFHG DNYDQLVRIAKVLGTD+LYGY++KY IDLDP FNDI
Sbjct: 1118 WTCGVWAACLPA*SSGKSPFFHGHDNYDQLVRIAKVLGTDDLYGYIEKYQIDLDPRFNDI 1297
Query: 274 LGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPV 328
LG+HSRKRWE F+HSEN+HL+SPEALD LDKLLRYDH +RLTA+EAM+HPYF P+
Sbjct: 1298 LGRHSRKRWERFVHSENQHLISPEALDFLDKLLRYDHNERLTAREAMDHPYFXPI 1462
>00638
Length = 1595
Score = 131 bits (330), Expect(2) = 2e-43, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 70/79 (88%)
Frame = +2
Query: 88 NLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDY 147
NLRGGTN+I L+ VKDPVS+TPAL+FE++NNTDFKQLYQ TD+DIRFY+YEL+KALD+
Sbjct: 284 NLRGGTNVITLLAIVKDPVSRTPALIFEHVNNTDFKQLYQTFTDYDIRFYLYELMKALDF 463
Query: 148 CHSKGIMHRDVKPHNVMID 166
CHS GIMHRDVKP +++
Sbjct: 464 CHSMGIMHRDVKPSPPLVN 520
Score = 62.4 bits (150), Expect(2) = 2e-43, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +1
Query: 28 EAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 64
E + S NQDDYQ+VRKLGRGKYSEVFEAIN+TNNE
Sbjct: 103 EVRLLSRRNQDDYQIVRKLGRGKYSEVFEAINVTNNE 213
>01060
Length = 1800
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 135/258 (52%), Gaps = 10/258 (3%)
Frame = +1
Query: 93 TNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQ------ILTDFDIRFYMYELLKALD 146
TNI+ L D + + + LVFE+++ D K +L ++ Y+++++ +
Sbjct: 250 TNIVCLEDVIME--DERLFLVFEFLS-MDLKMYIDKFPEGVVLDRRLVKSYVFQIVTGIX 420
Query: 147 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLV 205
+CH + I+HRD+KP N++I+H +++ D+G+A F P + Y V + +++ PE+L+
Sbjct: 421 FCHQRRIVHRDLKPQNLLINH-TGAIKIADFGMARTFALPVRAYTHEVVTLWYRAPEILM 597
Query: 206 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHID 265
Y +D+WS+G + A M+ R P F G DQL +I +++GT + + + +
Sbjct: 598 GASKYSTPVDVWSIGTIFADMLIRT-PIFKGDSEIDQLFKIFRIIGTPTEQTWPEFHKL- 771
Query: 266 LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
P FN + W+ SE + LDL+++ L+ D QR++ K+ ++H YF
Sbjct: 772 --PAFNGMF-----PLWKEGKLSETLTDLDSLGLDLIERTLKCDPAQRISCKKMLQHAYF 930
Query: 326 YPV---VKEQSQPCAENT 340
V VK P E++
Sbjct: 931 LNVDTSVKPVDVPSPEHS 984
>12704
Length = 641
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 56/64 (87%)
Frame = +3
Query: 1 MPGPAAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINI 60
MP P SRARVYA+VN+ + REYWDYE+HV WGNQDDYQ+VRKLGRGKYSEVFEAINI
Sbjct: 429 MPLP---SRARVYADVNTHKPREYWDYESHVVEWGNQDDYQIVRKLGRGKYSEVFEAINI 599
Query: 61 TNNE 64
TNNE
Sbjct: 600 TNNE 611
>14126
Length = 1265
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 122/239 (51%), Gaps = 7/239 (2%)
Frame = +3
Query: 94 NIIKLIDTVKDPVSKTPA---LVFEYINNTDFKQLYQI----LTDFDIRFYMYELLKALD 146
N+++L+D + ++ LVFEYI + L + L I+ M +LL +D
Sbjct: 381 NVVRLLDVSHNTITDREIRLNLVFEYIEHDLATYLAKCPSPGLGPDRIKDLMLQLLNGVD 560
Query: 147 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVD 206
+ HS I+HRD+KP N++I + +L+L D+GLA Y V + +++ PE+L+
Sbjct: 561 FLHSNRIVHRDLKPQNLLIS-KDGRLKLADFGLARIYSFHMALTTVVVTLWYRSPEVLMQ 737
Query: 207 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHIDL 266
+ Y S+D+WS GC+ A + F + F G +DQL +I +V+G + + +
Sbjct: 738 AE-YGTSVDIWSCGCIFAEL-FTRRALFKGSSEFDQLKKIFEVIGLPPAGDWPEGVSV-- 905
Query: 267 DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
H N + + + P+A DL++K+L + +R++++E++ HPY
Sbjct: 906 --HRNSFRPTPPVP-LQTLVPE-----MDPQAKDLMEKMLVFKSGRRISSRESLLHPYL 1058
>04138
Length = 800
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 7/196 (3%)
Frame = +1
Query: 145 LDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFY----HPAQEYNVRVASRYFKG 200
L Y H I+HRD+K N++I +Q L+L D+GLA + Y RV + +++
Sbjct: 52 LYYIHRNKILHRDMKAANILIT-KQGVLKLADFGLARAFSVNLRQPNRYTNRVVTLWYRP 228
Query: 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLG--TDELYGY 258
PELL+ + Y ++D W GC++A M + + P G +QL I ++ G T E++
Sbjct: 229 PELLLGDRNYSTAIDQWGAGCIMAEM-WTRNPIMQGTTEQNQLTLITQLCGSITPEVWPG 405
Query: 259 LKKYHIDLDPHFNDILGQHSRKRWENFIHSE-NRHLVSPEALDLLDKLLRYDHQQRLTAK 317
+ + + ++ I G + R +N I R L P LDL ++LL+ D QR++A
Sbjct: 406 VTQLSM-----YHQIKGALAAGR-KNIIRDRFARILKDPYGLDLFERLLKMDPSQRISAD 567
Query: 318 EAMEHPYFYPVVKEQS 333
EA+ H +F+ V+ +S
Sbjct: 568 EALNHDFFWVGVEPKS 615
>01707
Length = 757
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 96/162 (59%), Gaps = 4/162 (2%)
Frame = +1
Query: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHS 150
N+++LI+ + K LVF+Y+++T +L + L + ++ +Y+ L A+++CH
Sbjct: 244 NLVRLIEVFRR--KKRLHLVFDYVDHTLLNELDRYPRGLPEPMVKRIIYQTLLAVNFCHQ 417
Query: 151 KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH-PAQEYNVRVASRYFKGPELLVDYQM 209
+HRDVKP N++I +Q +++L D+G A P EY VA+R+++ PELLV
Sbjct: 418 YNTIHRDVKPENILIT-RQGQVKLCDFGFARILTGPGDEYTDYVATRWYRAPELLVGDTQ 594
Query: 210 YDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLG 251
Y +D+W++GC+ A ++ + + G+ + DQL I K LG
Sbjct: 595 YGPPVDVWAIGCVFAELL-TGQALWPGRSDVDQLHLIRKTLG 717
>29581
Length = 1278
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 126/255 (49%), Gaps = 6/255 (2%)
Frame = -2
Query: 88 NLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD---IRFYMYELLKA 144
NLR NI++L + V + LV EY L + F ++ + +LLK
Sbjct: 1187 NLRH-QNIVQLQEVVVGKSLDSLFLVMEYCEQDLASLLDNMPAPFSESQVKCIVLQLLKG 1011
Query: 145 LDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFY-HPAQEYNVRVASRYFKGPEL 203
L Y H I+HRD+K N+++ + +++ D+GLA Y P + +V + +++ PEL
Sbjct: 1010 LRYLHEAFIIHRDLKVSNLLMT-DKGCVKIADFGLARNYGKPQKPMTPKVVTLWYRAPEL 834
Query: 204 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGT--DELYGYLKK 261
L + + ++DMWS GC+L ++ K P G+ + Q+ I ++LGT D ++ +
Sbjct: 833 LFGSKTHSTAIDMWSAGCILGELLGHK-PLMPGRSDLQQIELIMELLGTPNDTIWPGFSQ 657
Query: 262 YHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAME 321
P F + ++ + N H+ +S + LL+ L Y Q+R TA++ +E
Sbjct: 656 L-----PAFEQFTLK--KQPYNNLRHT--FPWLSESGIRLLNGLFMYHPQKRATAEDCLE 504
Query: 322 HPYFYPVVKEQSQPC 336
H YF KEQ PC
Sbjct: 503 HSYF----KEQPYPC 471
>04591
Length = 1117
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 14/229 (6%)
Frame = -2
Query: 112 LVFEYINNTDFKQLYQILTDF---DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
L+FEY + L + F D + M +LL L Y H+K I+HRD+K N+++ +
Sbjct: 966 LIFEYCDYDLAGLLNNLRVKFSLADKKNLMSQLLNGLFYIHTKQILHRDIKAANILLT-R 790
Query: 169 QKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 228
L+L D+GL+ + ++ RV + +++ PELL+ + Y +DMW +GC++A M
Sbjct: 789 DGVLKLADFGLSRPWVKSKRLTNRVVTLWYRPPELLLGEREYGPEIDMWGVGCIMAEMWS 610
Query: 229 RKEPFFHGQDNYDQLVRIAKVLGT-----------DELYGYLKKYHIDLDPHFNDILGQH 277
RK P G+ QL I + G+ ELYG L D+
Sbjct: 609 RK-PLMQGRSEQHQLSLITDLCGSLNAEVWPGVTKLELYGKL------------DLPQGK 469
Query: 278 SRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFY 326
RK E + L + E +L+D LR D QR+ A+ H +F+
Sbjct: 468 PRKVKERMLDL----LKNKEGAELIDIFLRLDPGQRMNCDNALSHDFFW 334
>32000
Length = 644
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Frame = -1
Query: 171 KLRLIDWGLAEFYH-PAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 229
K+++ D+GLA + P + Y V + +++ PE+L+ + Y +D+WSLGC+ M+ R
Sbjct: 575 KMKIADFGLARVFGLPVRTYTHEVITLWYRAPEILLGCRFYSVPVDIWSLGCIFVEMMTR 396
Query: 230 KEPFFHGQDNYDQLVRIAKVLGT--DELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIH 287
+ F G DQL RI + LGT ++++ + K P + + K E +
Sbjct: 395 RA-LFPGDSEIDQLYRIFRTLGTPDEKVWPGVSKL-----PDYKPTFPKWPLKNLETVVS 234
Query: 288 SENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
+S LDLL ++L Y+ +R++A+ AM HPYF
Sbjct: 233 ------LSKVGLDLLKRMLTYNPNRRISARSAMRHPYF 138
>01756
Length = 1858
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 18/270 (6%)
Frame = -3
Query: 1 MPGPAAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQD-DYQLVRKLGRGKYSEVFEAIN 59
M A+ SR R + S+ Y YE + ++D Y+ + K+G+G + EVF+A
Sbjct: 1841 MSSTASASREREQKD-----SQRYSPYETLKFPFCDEDAKYEKLAKIGQGTFGEVFKARC 1677
Query: 60 ITNNEXXXXXXXXXXXXXX----XXXXXXXXXNLRGGTNIIKLIDTVKDPVSKTPA---- 111
+ L N++ LI+ +
Sbjct: 1676 KKTKQVVAMKKVLMDNEKEGFPITALREIKILQLLNHENVVDLIEICSTKATSANRYKSM 1497
Query: 112 --LVFEYINNTDFKQLYQILTDF---DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 166
LVFE+ + L + F +I+ M +L+ L Y H I+HRD+K N++I
Sbjct: 1496 FYLVFEFCEHDLAGLLSNMSVVFNLPEIKEVMKQLMNGLYYIHRNKILHRDMKAANILIT 1317
Query: 167 HQQKKLRLIDWGLAEFY----HPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 222
+Q L+L D+GLA + Y RV + +++ PELL+ + Y ++D W GC+
Sbjct: 1316 -KQGVLKLADFGLARAFSVNLRQPNRYTNRVVTLWYRPPELLLGDRNYSTAIDQWGAGCI 1140
Query: 223 LASMIFRKEPFFHGQDNYDQLVRIAKVLGT 252
+A M + + P G +QL I ++ G+
Sbjct: 1139 MAEM-WTRNPIMQGTTEQNQLTLITQLCGS 1053
>21079
Length = 878
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Frame = +1
Query: 95 IIKLIDTVKDPVSKTPALVFEYINNTD-FKQLYQ---ILTDFDIRFYMYELLKALDYCHS 150
++ L D + P +T LV E++ + F+++ + +LT+ D ++ ++ + Y H+
Sbjct: 10 LLMLWDAFEAP--RTMVLVMEFVGAGELFERVIRDDFVLTERDCVHFVRQICSGVGYMHT 183
Query: 151 KGIMHRDVKPHNVM-IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 209
+ I+H D+KP NV+ + ++++ID+GLA FY P V + F PE +V+Y
Sbjct: 184 QSILHLDLKPENVLCVSDNSNQIKIIDFGLARFYKPGDSLQVLFGTPEFIAPE-VVNYDE 360
Query: 210 YDYSLDMWSLGCM 222
+++ DMWS+G +
Sbjct: 361 INFTTDMWSIGVI 399
>15910
Length = 1361
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Frame = +2
Query: 130 TDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQ--KKLRLIDWGLAEFYHPAQ 187
T+ D + ++L + Y H+ G++HRD+KP N++ + KL+L D+GL+ P
Sbjct: 458 TEKDAARAISDILHGVQYIHANGVVHRDLKPENLLYECMTDDSKLKLADFGLSRIIEPEV 637
Query: 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIA 247
+ + + + PE+L + Y S+DMWS+G + ++ EPFF ++ +
Sbjct: 638 QMSTVCGTPGYCAPEVLKGDK-YTPSVDMWSVGVIAYILLCGYEPFF-AENEF------- 790
Query: 248 KVLGTDELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLR 307
E+Y + K D + W +S A D++ KLL
Sbjct: 791 ------EMYRKIIKGEYKFDEEY-----------WSE---------ISENAKDVVRKLLV 892
Query: 308 YDHQQRLTAKEAMEHPYFYPVVKEQSQ 334
D ++RLTA EA+ P+ V + +
Sbjct: 893 IDPKKRLTATEALRLPWVKGVATKTTN 973
>23319
Length = 2235
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Frame = +3
Query: 208 QMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGT---DELYGYLKKYHI 264
+MY S+DMWS GC+ A + P F G D+ DQL RI K+LGT D+ G + +
Sbjct: 21 KMYSTSIDMWSAGCIFAELANAGRPLFPGNDDDDQLKRIFKLLGTPTEDQWPGMTQLPNY 200
Query: 265 DLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
+ P + H W+ + N + DLL LL R++A EA++HPY
Sbjct: 201 RMFPMY------HVTTTWQQVVPKLNS-----KGRDLLQCLLVCCPSDRMSADEALQHPY 347
Query: 325 FYPVVKEQSQPCAEN 339
F + QP +N
Sbjct: 348 FADLPPLVRQP*TQN 392
>26560
Length = 398
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 65/108 (60%)
Frame = -1
Query: 126 YQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHP 185
+ + T+ ++RFY E++ L++ HS+ +++RD+KP N+++D + +R+ D GLA +
Sbjct: 374 HGVFTEKEVRFYAAEVMLGLEHMHSRFVVYRDLKPANILLD-ENGHVRISDLGLACDFSK 198
Query: 186 AQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233
+ + V + + PE+L+ Q YD S D +S GCML ++ PF
Sbjct: 197 KRPH-ASVGTHGYMAPEVLMKGQSYDSSADWFSFGCMLYKLLKGHSPF 57
>01392
Length = 1806
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Frame = -1
Query: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYH-- 184
L + + + + +ALD+ HSKGI HRD+KP N++ +H +++ D+ LA
Sbjct: 1800 LCEREASLVVRHIARALDFLHSKGIAHRDLKPENILCEHLDDVVPVKICDFDLASGISCD 1621
Query: 185 ----PAQEYNVRVASRYFKGPEL----LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236
E V S + PE+ + D YD D+WSLG +L M+ PF+ G
Sbjct: 1620 GDGTKTPELLTPVGSAEYMAPEVVDAWVGDSFSYDKRCDLWSLGIILYIMLCGYPPFY-G 1444
Query: 237 QDNYDQLVRIAKVLGTDELYGYLKKYHIDLDPHFNDILGQHSR---KRWENFIHSENRHL 293
Q G D + + H D FN I H + + W +
Sbjct: 1443 Q------------CGEDCGWNRGEACHDCQDMLFNSIQDGHYKFPSQEWTS--------- 1327
Query: 294 VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFY--PVVKEQSQP 335
+S A DL+ LL + ++R +A + ++HP+ P + + P
Sbjct: 1326 ISSSAKDLIRHLLVREPRKRYSAADVLKHPWICTPPAATQLATP 1195
>00300
Length = 2318
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Frame = -1
Query: 40 YQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXXXNLRGGTNIIKLI 99
+Q K+G G++ +V+ A+N++ E LR + IK+
Sbjct: 1652 WQRGNKIGEGQFGKVYTAVNMSTGELMALKEMKFQPNDLQ--------QLREMCDEIKIF 1497
Query: 100 DTVKDP---------VSKTPALVF-EYINNTDFKQLYQI-LTDFDIRFYMYELLKALDYC 148
+ ++ V K L+F EY + ++ ++ L ++ IR Y E++ A+++
Sbjct: 1496 EGIQHENLVKYYGVEVHKDEMLMFMEYCDTGTIEEAAKMGLPEYLIRRYTREIVLAVNHL 1317
Query: 149 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGL-----AEFYHPAQEYNVRVASRYFKGPEL 203
H I+HRD+K N+ + ++L D+G + P + +N+ V + + PE+
Sbjct: 1316 HENSIVHRDIKGANIFLT-SNGHVKLGDFGCSVKLKSHTTMPGEFHNL-VGTTAYMAPEV 1143
Query: 204 LV--DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIA 247
D Y + D+WSLGC++ M K P+ +NY + ++
Sbjct: 1142 FTQNDQGGYGRAADIWSLGCVVIEMATGKRPWHDLDNNYQIMYKVG 1005
>01966
Length = 1735
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Frame = -1
Query: 93 TNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQ------ILTDFDIRFYMYELLKALD 146
TNI+ L D + + + LVFE+++ D K +L ++ Y+++++ ++
Sbjct: 1534 TNIVCLEDVIME--DERLFLVFEFLS-MDLKMYIDKFPEGVVLDRRLVKSYVFQIVTGIN 1364
Query: 147 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLV 205
+CH + I+HRD+KP N++I+H +++ D+G+A F P + Y V + +++ PE+L+
Sbjct: 1363 FCHQRRIVHRDLKPQNLLINH-TGAIKIADFGMARTFALPVRAYTHEVVTLWYRAPEILM 1187
Query: 206 DYQMYDYSLDMWSLGCM 222
Q + W+ G +
Sbjct: 1186 GPQ---STPPXWTCGAL 1145
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Frame = -3
Query: 210 YDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHIDLDPH 269
Y +D+WS+G + A M+ R P F G DQL +I +++GT + + + + P
Sbjct: 1175 YSTPVDVWSIGTIFADMLIRT-PIFKGDSEIDQLFKIFRIIGTPTEQTWPEFHKL---PA 1008
Query: 270 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPV- 328
FN + W+ SE + LDL+++ L+ D QR++ K+ ++H YF V
Sbjct: 1007 FNGMF-----PLWKEGKLSETLTDLDSLGLDLIERTLKCDPAQRISCKKMLQHAYFLNVD 843
Query: 329 --VKEQSQPCAENT 340
VK P E +
Sbjct: 842 TSVKPVDVPSPEQS 801
>12786
Length = 460
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Frame = -3
Query: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY---N 190
I+FY E+L+A+ H++G++H D+KP N M+ L+LID+G+A + +
Sbjct: 404 IKFYWREMLRAVKALHNEGVIHSDLKPANFML--VAGNLKLIDFGIANTLQQDKTSVLKD 231
Query: 191 VRVASRYFKGPELLV-------DYQMYD--------YSL----DMWSLGCMLASMIFRKE 231
RV + + PE ++ D M + Y + D+WSLGC+L +M++ +
Sbjct: 230 SRVGTPSYMSPEAIMAACDDSADDSMEEDGHRTKPKYKVGVRSDVWSLGCILYNMVYGRT 51
Query: 232 PFFHGQDNYDQLVRIA 247
PF H ++N +L I
Sbjct: 50 PFQHIKNNMGKLQAIT 3
>12721
Length = 821
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +1
Query: 142 LKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGL-AEFYHPAQEYNVRVASRYFKG 200
LKAL + H+ G++HRD+K ++++ H K++L D+G A+ Q+ V + Y+
Sbjct: 403 LKALAFLHANGVIHRDIKSDSILLSH-DGKVKLXDFGFCAQVTQDLQKRKSLVGTPYWMA 579
Query: 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 235
PE++ Y +D+WSLG M+ MI + PFF+
Sbjct: 580 PEVISRLP-YGPEVDIWSLGIMVMEMIDAEPPFFN 681
>03294
Length = 1684
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Frame = -1
Query: 212 YSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHIDLDPHFN 271
+ +D+WS+G + A M+ R P F G DQL +I +++GT + + + + P FN
Sbjct: 1678 HPVDVWSIGTIFADMLIRT-PIFKGDSEIDQLFKIFRIIGTPTEQTWPEFHKL---PAFN 1511
Query: 272 DILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPV--- 328
+ W+ SE + LDL+++ L+ D QR++ K+ ++H YF V
Sbjct: 1510 GMF-----PLWKEGKLSETLTDLDSLGLDLIERTLKCDPAQRISCKKMLQHAYFLNVDTS 1346
Query: 329 VKEQSQPCAENT 340
VK P E++
Sbjct: 1345 VKPVDVPSPEHS 1310
>14420
Length = 528
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +2
Query: 140 ELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQ-EYNVRVASRYF 198
E L+AL++ H ++HRD+K N+++ ++L D+G P Q + + V + Y+
Sbjct: 221 ECLQALEFLHENQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQLSPEQSKRSTMVGTPYW 397
Query: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 235
PE++ Q Y ++D+WSLG M MI + P+ +
Sbjct: 398 MAPEVVTRKQ-YGPTVDIWSLGVMCIEMIEGEPPYLN 505
>31885
Length = 529
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -2
Query: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV 193
++FY+ +L LDY S+ I+HRD+KP N+++D +Q + D+ +A +
Sbjct: 366 VKFYLCQLALVLDYLRSQKIVHRDIKPDNILLD-EQGHCHVTDFNIATQLEDDELATSTS 190
Query: 194 ASRYFKGPEL----LVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233
+R + PE+ + + + Y + +D WSLG L ++ ++ PF
Sbjct: 189 GTRPYMAPEVYGVAINERRGYGFPVDWWSLGVSLFELLKKRRPF 58
>30755
Length = 1137
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +2
Query: 127 QILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA-EFYHP 185
+I T+ RFY E++ AL Y HS+GI++RD+K N+++D + +++ D+GL E
Sbjct: 17 RIFTEERTRFYGAEIISALGYLHSQGIIYRDLKLENLLLD-KDGHIKVADFGLCKEDITY 193
Query: 186 AQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 235
+ + + PE+L D Y ++D W G ++ MI + PF++
Sbjct: 194 GRTTKTFCGTPEYLAPEVLDDND-YGRAVDWWGTGVVMYEMICGRLPFYN 340
>13212
Length = 1067
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 7/208 (3%)
Frame = -1
Query: 125 LYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVM--IDHQQKKLRLIDWGL-AE 181
L + +T+ I + +E+ ALD+ H ++HRD+K NV+ ID + ++L D+G+ A+
Sbjct: 1001 LEKPMTEAQICYVCHEMCMALDFLHRHHVIHRDIKAGNVLLTIDGE---VKLADFGVSAK 831
Query: 182 FYHPAQEYNVRVASRYFKGPELLVDYQM----YDYSLDMWSLGCMLASMIFRKEPFFHGQ 237
Q+ + + + Y+ PE+++ + YD+ D+WSLG L + EP
Sbjct: 830 NTQTQQKRDTFIGTPYWMAPEVVLCETLKDTPYDFKADIWSLGVTLIEFA-QIEPPNKEM 654
Query: 238 DNYDQLVRIAKVLGTDELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPE 297
L++I H +D K+W
Sbjct: 653 HPMRVLIKI----------------------HKSDPPTLEKPKKWTKLFK---------- 570
Query: 298 ALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
D + K L D R TA E +EHP+
Sbjct: 569 --DFIAKCLVKDPNLRPTAAELLEHPFM 492
>19761
Length = 473
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Frame = -3
Query: 134 IRFYMYELLKALDYCHSKG--IMHRDVKPHNVMIDHQQKKLRLIDWGLA-EFYHPAQEYN 190
I ++ + AL+Y H+ I+HRD+KP N+ + ++ +RL D GLA + PA
Sbjct: 417 IVCWLMQTASALNYMHTHTPVILHRDLKPQNIYVT-EKGDVRLGDLGLARKLTGPADFAT 241
Query: 191 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVL 250
+V + + PE+L Q Y+ D+WSLGC+ + +K G D + + +V+
Sbjct: 240 SQVGTIMYLSPEIL-SQQPYNSKSDIWSLGCVFYDITGKK-----GSDEMGVMFLLVQVM 79
Query: 251 GTDEL 255
G +L
Sbjct: 78 GGRKL 64
>18287
Length = 678
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%)
Frame = -3
Query: 210 YDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHIDLDPH 269
YDYS+D+WS+GC+ A ++ R+ F Q QL I ++GT + +
Sbjct: 673 YDYSIDIWSVGCIFAELLSRRI-LFQAQGPVQQLDMIINLVGTPRPEDMERA----CEGA 509
Query: 270 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
N IL Q R++ +++ + H + EA+ LL ++L + + R++A+EA+ HPY
Sbjct: 508 RNHILNQPFRRQNLLTLYNLSPH-ATHEAVRLLTRMLILNPKNRISAEEALSHPYL 344
>18921
Length = 697
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Frame = +2
Query: 112 LVFEYINNTDFKQLYQI----LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH 167
+V EY + ++ L + +I +Y LK L Y HS+ +HRD+K N+++++
Sbjct: 245 IVMEYCGAGSVSDIMRLRNKTLVEREIATILYYTLKGLXYLHSRRKIHRDIKAGNILLNN 424
Query: 168 QQKKLRLIDWGLA-EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 226
+ +L D+G+A + + N + + Y+ PE++ + YD D+WSLG M
Sbjct: 425 EGHA-KLADFGVAGQLTDTMAKRNTVIGTPYWMAPEVIQEIG-YDCVADIWSLGITALEM 598
Query: 227 IFRKEPFFH 235
K P
Sbjct: 599 AEGKPPVME 625
>27405
Length = 532
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Frame = -3
Query: 108 KTP---ALVFEYINNTDFK---QLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPH 161
+TP + + +N D + + T+ ++RFY E++ L++ HS+ +++RD+KP
Sbjct: 344 QTPEKLCFILDLMNGGDLHYHLSQHGVFTEKEVRFYAAEVMLGLEHMHSRFVVYRDLKPA 165
Query: 162 NVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLD 215
N+++D + +R+ D GLA + + + V + + PE+L+ Q YD S D
Sbjct: 164 NILLD-ENGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLMKGQAYDSSAD 9
>26711
Length = 405
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = -2
Query: 140 ELLKALDYCHSKGIMHRDVKPHNVMIDHQQ-KKLRLIDWGLAEFYHPAQEYNVRVASRYF 198
++L L + H++G++H D+KP N+++ + ++LID+GLA +P QE + + F
Sbjct: 392 QVLDILQHVHAQGVVHMDLKPSNLLLSGDKLDSVQLIDFGLARKLYPPQETFLNHGTPGF 213
Query: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233
PE L D + + D+W +G + ++ + PF
Sbjct: 212 TSPEAL-DVKPISTASDVWGVGVLAYILLSGQSPF 111
>13592
Length = 980
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 111/299 (37%), Gaps = 19/299 (6%)
Frame = +2
Query: 45 KLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXXXNLRGGTNIIKLIDTVKD 104
K+G+G++ +V+ A+N E L+ +K+++ +K
Sbjct: 5 KIGQGRFGKVYTAVNNNTGELMAMKEIAIQPGETRA--------LKNVAEELKILEGIKH 160
Query: 105 P---------VSKTPALVF-EYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSK 151
V + L+F E + + L ++ L + R + +LL + H
Sbjct: 161 KNLVRYYGIEVHREELLIFMELCSEGTLESLVELTGGLPEALSRRFTAQLLSGVAELHKH 340
Query: 152 GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHP----AQEYNVRVASRYFKGPELLVDY 207
GI+HRD+K N+ + L+L D+G A E V ++ + PE+
Sbjct: 341 GIVHRDIKTANIFLVDGSNSLKLGDFGSAVKIQAHTTVPGELQGYVGTQAYMAPEVFTKT 520
Query: 208 QMYDYS--LDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHID 265
+ D+WS+GC++ M K P+ N+ + ++ +
Sbjct: 521 NSDGHGRLADIWSVGCVVVEMASGKRPWAQFDSNFQIMFKVG----------------MG 652
Query: 266 LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
P + L Q E D +D L++D +QRL+A E +E +
Sbjct: 653 EKPQAPESLSQ--------------------EGHDFIDHCLQHDPKQRLSAIELLEQNF 769
>28638
Length = 1458
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = -1
Query: 153 IMHRDVKPHNVMIDHQQKK-LRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYD 211
I+H D+KP N+++ + ++ ++++D+G Q + SR+++ PE+L+ YD
Sbjct: 768 IIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQYIQSRFYRSPEVLLGVP-YD 598
Query: 212 YSLDMWSLGCMLASM 226
++DMWSLGC+L M
Sbjct: 597 LAIDMWSLGCILVEM 553
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 30/139 (21%)
Frame = -2
Query: 217 WSLGCMLASMIFRK----EPFFHGQDNYDQLVRIAKVLGT------DELYGYLKKYHIDL 266
W L C ++ + + P F G + +DQ+++I +VLG D+ K + +
Sbjct: 596 WPLTCGXWAVYWWRCTXGNPLFAGSNEFDQMMKIVEVLGVPPRHILDQAQKTRKYFDLLP 417
Query: 267 D-------PHFNDILGQHSRKRWENFIHSE-----NRHLVSP--------EALDLLDKLL 306
D P N S ++ + +E R + P + DL+ ++L
Sbjct: 416 DGTYAPKKPRDNKKYKSPSSRKLHEVLGAEKGGPGGRRMGEPGHTVADYLKFKDLILRML 237
Query: 307 RYDHQQRLTAKEAMEHPYF 325
+D + R++ A++H +F
Sbjct: 236 DFDPKTRISPYYALQHNFF 180
>09606
Length = 1300
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Frame = -3
Query: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE------- 181
L + IR + L+ L Y HS GI+ D++P V++D L+ D+GL++
Sbjct: 842 LPETSIRDFGIHLVTGLHYIHSLGILFHDLRPSKVLLD-TSGVLKFADFGLSKVEGENLE 666
Query: 182 -----FYHPAQEYNVRVASRYFK-----------GPELLVDYQMYDYSL--DMWSLGCML 223
F ++N++ A K PE+ +Q + S+ D+W+LGC+
Sbjct: 665 ELFFKFAEAGDQWNIQSAEEMMKQVPTSGSPTYMAPEV---FQGAEPSIMSDLWALGCVF 495
Query: 224 ASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHIDLDPHFNDILGQHSRKRWE 283
M PF + YD + KVL + +K + P
Sbjct: 494 YEMFSGHPPFL--GETYD--ITKDKVLNKEFPLPKVKGSRLSAKP--------------- 372
Query: 284 NFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
SPE L+LL+ LL+ D +RL+ ++H ++
Sbjct: 371 -----------SPEFLNLLESLLQKDSTRRLSWASLVKHAFW 279
>03240
Length = 1683
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 48/171 (28%)
Frame = -3
Query: 112 LVFEYINNTDFKQL---YQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
V +Y+ D L +IL + RFY+ EL++A++ H G +HRD+KP N++ID +
Sbjct: 1060 FVMDYVPGGDLMGLLIRMEILDEPLARFYVAELVQAIESVHRMGFIHRDIKPDNILID-R 884
Query: 169 QKKLRLIDWGL------------------------------------AEFYHPAQEYNVR 192
++L D+GL E P + R
Sbjct: 883 NGHIKLTDFGLCTGFRWTHNSKYYQRDGTHARQDSMEVKCQLDEQCQCEILKPLERRRKR 704
Query: 193 ---------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 234
V + + PE+L Y D WS+G +L M+ PF+
Sbjct: 703 EQRCLAHSLVGTPNYIAPEVLSRLGGYTSVCDWWSVGVILFEMLVGHPPFY 551
>18484
Length = 635
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = +1
Query: 136 FYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVAS 195
FY E+ L + H +GI++RD+K NVM+D + +++ D+G+ + + +
Sbjct: 55 FYAAEIAVGLFFLHDQGIIYRDLKLDNVMLD-SEGHIKIADFGMCK-----EGMTGDATT 216
Query: 196 RYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDN 239
R F G PE+++ YQ Y S+D W+ G +L M+ + P F G+D
Sbjct: 217 RTFCGTPDYIAPEIVL-YQPYSKSVDWWAYGVLLFEMLAGQPP-FDGEDE 360
>19094
Length = 898
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +1
Query: 127 QILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA-EFYHP 185
+ L + +I +Y LK L Y HS+ +HRD+K N++++++ +L D+G+A +
Sbjct: 43 KTLVEREIATILYYTLKGL*YLHSRRKIHRDIKAGNILLNNEGHA-KLADFGVAGQLTDT 219
Query: 186 AQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 226
+ N + + Y+ PE++ + YD D+WSLG M
Sbjct: 220 MAKRNTVIGTPYWMAPEVIQEIG-YDCVADIWSLGITALEM 339
>21433
Length = 590
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%)
Frame = +2
Query: 137 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 196
Y+Y+L AL+YCH + ++HRD+KP N+++ + L++ D+G + + P+ +
Sbjct: 182 YIYQLSSALEYCHYRKVIHRDIKPENLLLG-LKGDLKIADFGWS-VHAPSSRRTTMCGTL 355
Query: 197 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233
+ PE +V+ + +D ++D+WSLG + + P
Sbjct: 356 DYLPPE-MVEGKTHDENVDLWSLGVLCYEFLVGTPPL 463
>18401
Length = 463
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Frame = -3
Query: 193 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGT 252
V++R+++ PE++++ + + D+WS+GC++ ++ F DN + L + ++LG+
Sbjct: 449 VSTRHYRAPEVILELG-WSHPCDVWSVGCIMFE-LYTGYTLFQTHDNKEHLAMMERILGS 276
Query: 253 DELYGYLKK-------YHIDLDPHFNDILGQHSRKRWENFIH----SENRHLVSPEALDL 301
Y KK +H LD + ++ R+ + + EN+ + DL
Sbjct: 275 LP-YRMAKKTKKQKYFHHGRLDVPERSSMARYVRENTKPLLRYVKDRENKD--HQQLFDL 105
Query: 302 LDKLLRYDHQQRLTAKEAMEHPYFYP 327
+ KLL Y+ R + +A++HP+F P
Sbjct: 104 MKKLLAYEASSRYSLLQALQHPFFSP 27
>07940
Length = 1336
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Frame = -3
Query: 123 KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA-- 180
+ + ++LT D+ Y Y++ + ++Y SK +HRD+ NV++ ++ L++ D+GL
Sbjct: 374 QDMLKMLTPKDLISYAYQVARGMEYLASKQCIHRDLAARNVLV-AEEYVLKIADFGLTRN 198
Query: 181 --EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 223
+F + + + R+ ++ PE L D + Y D+WS G +L
Sbjct: 197 LQQFDYYRKTTDGRLPVKWM-APEALFDRK-YTSKSDVWSYGVLL 69
>13078
Length = 773
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Frame = -1
Query: 214 LDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKK-------YHIDL 266
D+WS+GC++ ++ F DN + L + ++LG+ Y KK YH L
Sbjct: 734 CDVWSIGCIMFE-LYTGYTLFQTHDNKEHLAMMERILGSLP-YRMAKKTKKQKYFYHGRL 561
Query: 267 DPHFNDILGQHSRKRWENFIHSENRHLVSP------EALDLLDKLLRYDHQQRLTAKEAM 320
D G++ R + R++ P + DL+DK+L Y+ R + ++AM
Sbjct: 560 DWDEKSSAGRYVRDN----VKPLRRYVKDPDNEDHQQLFDLMDKMLSYEVSTRYSLRQAM 393
Query: 321 EHPYF 325
HP+F
Sbjct: 392 RHPFF 378
>37602
Length = 804
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = -1
Query: 112 LVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
+ EY + +Y + LT+ I F E LK L Y H +G MHRD+K N+++ +
Sbjct: 288 IAMEYCGGGSMQDIYHVTGPLTEPQIAFVCRETLKGLHYLHRRGKMHRDIKGANILLTEE 109
Query: 169 QKKLRLIDWGLAEFYHPAQEYNVRVASRYF 198
D LA+F+ + ++ V + F
Sbjct: 108 G------DVKLADFWRVSSNHSHNVQKKVF 37
>31489
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Frame = +3
Query: 94 NIIKLIDTVKDPVS----KTPALVFEYINNTDFKQLY--QILTDFDIRFYMYELLKALDY 147
NII + + +K S K +VF+ + + + +Y Q LT+ IR+++Y++L+ L Y
Sbjct: 33 NIISIREILKPKDSYHDFKDIHVVFDLMESDLHRIIYSDQPLTEEHIRYFLYQILRGLKY 212
Query: 148 CHSKGIMHRDVKPHNVM 164
HS ++HRD+KP N++
Sbjct: 213 IHSANVVHRDLKPSNLL 263
>13066
Length = 551
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 135 RFYMYELLKALDYCHSKGIMHRDVKPHNVMI-DHQQKKLRLIDWGLAEFYHPAQEYNVR- 192
+ + Y++ AL+Y HS + HRD+K N+++ H KL + A ++Y R
Sbjct: 285 KIWFYQMTTALNYLHSYDVAHRDLKCENILLSSHFNVKLADFGFACACITESGEKYMSRT 464
Query: 193 -VASRYFKGPELLVDYQMYDYSLDMWSLG 220
S + PE++ D WSLG
Sbjct: 465 YCGSAAYAAPEIVYGAPYAPKVADAWSLG 551
>11185
Length = 473
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 25/120 (20%)
Frame = +1
Query: 133 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE----------- 181
IR + L+ L Y HS GI+ D++P V++D L+ D+GL++
Sbjct: 4 SIRDFGIHLVTGLHYIHSLGILFHDLRPSKVLLD-TSGVLKFADFGLSKVEGENLEELFF 180
Query: 182 -FYHPAQEYNVRVASRYFK-----------GPELLVDYQMYDYSL--DMWSLGCMLASMI 227
F ++N++ A K PE+ +Q + S+ D+W+LGC+ M
Sbjct: 181 KFAEAGDQWNIQSAEEMMKQVPTSGSPTYMAPEV---FQGAEPSIMSDLWALGCVFYEMF 351
>01718
Length = 959
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 9/208 (4%)
Frame = +3
Query: 31 VPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXXXNLR 90
V + DD+ + K+G G +SEVF+ + + N
Sbjct: 129 VSALTRLDDF-ICEKIGAGFFSEVFKVTHRITGQVMALKMNTMTSNRHNMLREVQLLNRL 305
Query: 91 GGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD---FDIRFYM-YELLKALD 146
NI++ + + AL EYI + + +QL + + + R + L + LD
Sbjct: 306 QHANILRFMGVCVHE-GQLHALT-EYIPSGNLEQLLEKKDEELPWTQRIQLTLGLARGLD 479
Query: 147 YCHSKGIMHRDVKPHNVMI---DHQQKKLRLIDWGLA-EFYHPAQEYNV-RVASRYFKGP 201
Y HS +HRD+ N++I D+ + D+GLA + P + + V S Y+ P
Sbjct: 480 YLHSTRFIHRDLTSKNILIRREDNHGYHAVIADFGLATKIPDPLDKEKLPTVGSPYWMAP 659
Query: 202 ELLVDYQMYDYSLDMWSLGCMLASMIFR 229
E+L + Y+ D++S+G ++ + R
Sbjct: 660 EVL-NGHFYNERADLFSVGIIMCEITAR 740
>05084
Length = 1324
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 236 GQDNYDQLVRIAKVLGTDELYGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHLV 294
G DQLV I KVLGT ++ +++P++++ Q W R
Sbjct: 8 GDSGVDQLVEIIKVLGTPT-----REQIREMNPNYSEFKFPQIKAHPWTKVF----RPRT 160
Query: 295 SPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
PEA+ L+ +LL Y R+ EA H +F
Sbjct: 161 PPEAIQLVSRLLEYTPSARIQPMEACAHAFF 253
>26009
Length = 886
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +3
Query: 133 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
+ + M +L+ ALD+ HSK ++HRD+KP NV+I
Sbjct: 714 EAKSVMKQLVSALDFMHSKQLVHRDIKPENVLI 812
>17975
Length = 449
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Frame = +3
Query: 137 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNV 191
Y ++++A+ YCH ++HRD+KP NV+ + ++L D+G + A+ N+
Sbjct: 282 YFRQIVEAISYCHKLHVVHRDLKPENVVFFEKPGLVKLTDFGFSTCLLQAKA*NI 446
>00715
Length = 1788
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 27/149 (18%)
Frame = +1
Query: 112 LVFEYINNTDFKQL---YQILTDFDIRFYM-YELLKALDYCHSKGIMHRDVKPHNVMIDH 167
L EY+ + + + +Q D +R + ++ + L Y HS I+H D+KP N ++
Sbjct: 166 LAMEYVGPLNLQTILNDHQQDIDSSMRLSLALQMARGLHYLHSINIVHLDLKPANCLLT- 342
Query: 168 QQKKLRLIDWGLAEFYHP-----------------------AQEYNVRVASRYFKGPELL 204
+ KLR+ D+G P N + ++ PELL
Sbjct: 343 RDLKLRIADFGCCHQLTPTGLDMGEREGGMAGNELELTPVQGAWKNELAGTLAYRAPELL 522
Query: 205 VDYQMYDYSLDMWSLGCMLASMIFRKEPF 233
Q S D++SLG L M R+ P+
Sbjct: 523 KGLQPSVRS-DVYSLGITLWQMCTRQGPY 606
>00392
Length = 668
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +3
Query: 134 IRFYMYELLKALDYCHSKG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNV 191
++ + ++LK L + H++ ++HRD+K N+ I +++ D GLA + + +V
Sbjct: 252 LKNWCRQVLKGLYFLHTRTPPVIHRDLKCDNIFITGPTGSVKIGDLGLATLKNQSFAKSV 431
Query: 192 RVASRYFKGPELLVDYQMYDYSLDMWSLG-CML 223
+ + F PE+ ++ YD ++D+++ G CML
Sbjct: 432 -IGTPEFMAPEMYEEH--YDEAVDVYAFGMCML 521
>12453
Length = 680
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Frame = +3
Query: 219 LGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGT---DELYGYLKKYHIDLDPHFNDILG 275
+GC+ M + P F G D+L I K LGT D L I +P F +
Sbjct: 6 VGCIFYEMACGR-PLFPGSTVEDELHLIFKTLGTPTEDSLP------SISRNPDFLAL-- 158
Query: 276 QHSRKRWENFIHSENRHLVS------PEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
N H + L++ + LDLL K L+Y+ + R++A ++++H +F
Sbjct: 159 --------NLPHYQGEALITIAPRLDSDGLDLLAKFLKYNAKIRVSAADSLKHSFF 302
>14116
Length = 1017
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Frame = -1
Query: 133 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA-----EFYHPAQ 187
D+ Y ++ + +DY +HRD+ N M+D + +++ D+GLA + Y+ ++
Sbjct: 318 DLIMYGVDIARGMDYLAGLKFVHRDLAARNCMLD-EDFHVKVADFGLARDIYEKEYYSSE 142
Query: 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 229
++ ++ L + YD D+WS G +L ++ R
Sbjct: 141 NKKAKLPVKWMALESL--EKGNYDSKTDVWSYGVVLWELLTR 22
>27546
Length = 426
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 35/58 (60%)
Frame = -1
Query: 135 RFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR 192
+ + +++ KAL Y HS I HRD+K N+++ ++ +++ D+G A + A +++
Sbjct: 171 KVWFFQMAKALQYLHSHDIAHRDLKCENILLS-KRLNVKIADFGFARYCRDAAGMDLK 1
>32359
Length = 928
Score = 28.5 bits (62), Expect(2) = 0.010, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = -1
Query: 112 LVFEYINNTDFK------QLYQILTDFDIRFYMYELLKALDYCHSKGIM 154
LV EY+ T ++ + Q + I+ YMY+L ++L Y HS+ +
Sbjct: 202 LVLEYVPETVYRVARHYSKSKQTIPILYIKLYMYQLFRSLAYIHSQACV 56
Score = 27.3 bits (59), Expect(2) = 0.010, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 152 GIMHRDVKPHNVMIDHQQKKL 172
G+ HRD+KP N+++D + L
Sbjct: 65 GVCHRDIKPQNLLLDPETGVL 3
>06358
Length = 1517
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 20/127 (15%)
Frame = +3
Query: 129 LTDFDIRFYMYELLKALDYCHSKG-IMHRDVKPHNVMIDHQQKKLRLIDWGLA--EFY-- 183
L D +I+ + ++ +AL + H+ +MHR+V P +M+ +L W LA EF
Sbjct: 351 LYDVEIKHGLLQVTEALGFLHNDAKMMHRNVCPEAIMLT------KLGSWKLAGYEFCVR 512
Query: 184 ----------HPAQEYNVRVASRY-----FKGPELLVDYQMYDYSLDMWSLGCMLASMIF 228
+P E+ +A F PE ++ Q S DM+SLG ++ S+
Sbjct: 513 SSDPQSTDPSYPFYEWRSDIAPVTQPHLDFMAPEYVLTMQCGTGS-DMFSLGLLVYSVFA 689
Query: 229 RKEPFFH 235
+ +P F
Sbjct: 690 KGKPLFE 710
>01106
Length = 878
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Frame = +3
Query: 111 ALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYCHSKG-IMHRDVKPHNVMI 165
A+VFE + K + YQ + +++ + ++L+ L Y H+K I+H D+KP N++I
Sbjct: 570 AMVFEVLGYNLLKLIIRSNYQGIPIHNVKLIIRQVLEGLSYMHAKCRIIHTDIKPENILI 749
>18481
Length = 437
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -1
Query: 140 ELLKALDYCHSKGIMHRDVKPHNVM--IDHQQKKLRLIDWGLAEFYHPAQ 187
+LL L++ H K +HRD+KP N + + +L +ID+GL++ Y Q
Sbjct: 173 QLLSRLEFIHQKCFIHRDLKPDNFLMGLGRHCHRLYIIDFGLSKRYKDTQ 24
>21800
Length = 855
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Frame = +2
Query: 111 ALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVMI 165
+VFE + K + YQ + +++ + ++L+ L+Y H+K I+H D+KP N++I
Sbjct: 557 CMVFEVLGYNLLKLIIRSNYQGIPVHNVKLIIRQVLEGLNYLHAKCNIIHTDIKPENILI 736
>28157
Length = 400
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Frame = +3
Query: 94 NIIKLIDTVKD-PVSKTPALVFEYINNTDFKQLYQIL---------TDFDIRFYMYELLK 143
NI+ L +D PV LV EY + LY +L T ++ +
Sbjct: 93 NIVCLYGACRDHPV----CLVMEY---AEGGSLYNVLHGSGPQPQYTAAHAMNWLLQCAL 251
Query: 144 ALDYCHS---KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH 184
++Y H K ++HRD+KP N+++ KL++ D+G A H
Sbjct: 252 GVEYLHGMKPKALIHRDLKPPNLLLIQCGTKLKICDFGTACDIH 383
>02638
Length = 1490
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 52/128 (40%)
Frame = +1
Query: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYG 257
F PE+L + Y + D+WS+GC++ M + P ++ D + L I K+ +
Sbjct: 34 FMAPEVL-RGESYGRACDVWSVGCVMIEMCTCRPP-WNSHDISNHLALIFKIASS----- 192
Query: 258 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 317
+D P EN +SP DL+ + L D R +AK
Sbjct: 193 ------VDPPP------------------IPEN---MSPPVRDLMLRCLEQDSDFRPSAK 291
Query: 318 EAMEHPYF 325
+ + HP F
Sbjct: 292 DLLMHPLF 315
>20773
Length = 391
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -1
Query: 275 GQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
G H R+ F H+ +V+ +L+ +LL YD QRLT A+ HP+
Sbjct: 370 GLHRRRSRPVFPHTT---VVTQHFYNLVQRLLTYDPSQRLTPDLALSHPF 230
>15931
Length = 447
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 297 EALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
+ DL+DK+L Y+ R + ++AM HP+F
Sbjct: 70 QLFDLMDKMLSYEVSTRYSLRQAMRHPFF 156
>35032
Length = 465
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 300 DLLDKLLRYDHQQRLTAKEAMEHPYFY 326
DL+ +LL YD +RLT A+ HP+ Y
Sbjct: 147 DLVKRLLNYDPSKRLTPXXALAHPFLY 227
>19301
Length = 712
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 111 ALVFEYINNTDFKQLYQILTDFD------IRFYMYELLKALDYCHSKGIMHRDVKPHNVM 164
++ EY + QLY++L D + + ++ ++Y HS I+HRD+K NV+
Sbjct: 497 CIIMEY---CPYGQLYEVLRDGKEIPPALVLDWSKQIASGMNYLHSHKIIHRDLKSPNVL 667
Query: 165 IDHQQKKLRLIDWGLA 180
+ + +++ D+G +
Sbjct: 668 V-AKNDVVKISDFGTS 712
>26909
Length = 394
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Frame = +2
Query: 227 IFRKEPFFHGQD---------NYDQLVRIAKVLGTDELYGYLKKYHIDLDPHFNDILGQH 277
+ EP FH + ++DQL RI V+G + + I P +
Sbjct: 14 LLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQEKDW---EDIRRMPEHQQLTKDF 184
Query: 278 SRKRWEN--FIHSENRHLVSPE--ALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
R + N + +H V + A LL KLL D +R+T+++AM+ PYF
Sbjct: 185 KRSSYVNCNLMKYMEKHKVKADSKAFHLLQKLLTMDPVKRITSEQAMKDPYF 340
>29590
Length = 320
Score = 30.4 bits (67), Expect = 0.98, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 176 DWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233
D G A + ++ + + + PE+L DY+ DMWSLG + M+ PF
Sbjct: 6 DLGFACLTNTGEDIRDIIGTPDYVAPEVL-DYEPLSIQTDMWSLGVLSYVMLTACSPF 176
>14104
Length = 573
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 294 VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
+P+A+ + L+ D +RLT + ++HPY
Sbjct: 88 AAPQAMSFMQSCLKMDPAERLTCHQLLQHPYM 183
>37063
Length = 455
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
Frame = -2
Query: 158 VKPHNVMIDHQQK--KLRLIDWGLAEFYHP------AQEYNVRVASRYFKGPELLVDYQM 209
+KP N++ +H + L++ D+ LA + E V S + PE+ VD +
Sbjct: 454 LKPENILCEHLDEVVPLKICDFDLASGINCDGDGTKTPELLTPVGSAEYMAPEV-VDAWV 278
Query: 210 -----YDYSLDMWSLGCML 223
YD DMWSLG +L
Sbjct: 277 GESFSYDKRCDMWSLGIIL 221
>17644
Length = 463
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 301 LLDKLLRYDHQQRLTAKEAMEHPY 324
L+ +LL YD QRLT A+ HP+
Sbjct: 90 LVQRLLTYDPSQRLTPDLALSHPF 161
>36481
Length = 806
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVM-IDHQ 168
+R Y+L A+++ H + H D+KP N++ +D Q
Sbjct: 677 VRHISYQLCYAVNFLHENQLTHTDLKPENILFVDSQ 784
>18663
Length = 600
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 200 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233
PE+L + Y +S+D W+LG +L M+ + PF
Sbjct: 32 APEILRG-EDYGFSVDWWALGVLLYEMLAGRSPF 130
>29360
Length = 363
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3
Query: 111 ALVFEYI--NNTDF--KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
LVFE + N DF + +Q L IR ++L AL G++H D+KP N+M+
Sbjct: 183 CLVFEMLEQNLYDFLKQNKFQPLPLKYIRPITQQVLTALRKLKQLGLIHADLKPENIML 359
>37603
Length = 1005
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 139 YELLKALDYCHSKGIMHRDVKPHNV 163
Y + L +CH +GI RD +PH +
Sbjct: 551 YHVRIQLSFCHVEGIKRRDGRPHAI 625
>20152
Length = 445
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDN 239
PE+L+ ++D+WSLG +L ++ + PF D+
Sbjct: 1 PEILLGDSYDAPAVDVWSLGVILYMLVVGEAPFQEANDS 117
>12045
Length = 1137
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 243 LVRIAKVLGTDELYGYLKKYHIDLDP-HFNDILGQHSRKRWENFIHS 288
++++A+V T +Y Y K H L + ILG ++KR E+F+HS
Sbjct: 302 VIKLARVKNTC-IY*YTKMIHFFLAVFYLPQILGSRTKKRREDFLHS 165
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|88196800|ref|NP_001034635.1| myosin VI [Mus musculus]
(1262 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01284 370 e-102
25922 113 5e-25
14047 110 3e-24
30605 97 3e-20
05656 32 1.1
07324 32 1.5
>01284
Length = 1603
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 168/267 (62%), Positives = 220/267 (82%)
Frame = +2
Query: 637 KLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVS 696
KL+FISVG KF+ QL +L+DKL+STG +FIRCIKPN+KM H FEGA ILSQLQC+GMVS
Sbjct: 2 KLNFISVGTKFRKQLLVLMDKLKSTGTNFIRCIKPNVKMVDHLFEGANILSQLQCAGMVS 181
Query: 697 VLDLMQGGFPSRASFHELYNMYKKYMPEKLARLDPRLFCKALFKALGLNEVDYKFGLTKV 756
VL+LMQ GFPSR F ELYNMYKKY+P +L+RLDPRLFCK+LFKALGL++ D+KFGLTKV
Sbjct: 182 VLELMQQGFPSRTPFSELYNMYKKYLPPELSRLDPRLFCKSLFKALGLDDKDFKFGLTKV 361
Query: 757 FFRPGKFAEFDQIMKSDPDHLAELVKRVNLWLVCSRWKKVQWCSLSVIKLKNKIKYRAEA 816
FFRPGKFAEFDQIMKSDP++LAELVK+V WL+CSRWKK QWC+LSVIKLKNKI+YRAE
Sbjct: 362 FFRPGKFAEFDQIMKSDPENLAELVKKVKKWLLCSRWKKAQWCTLSVIKLKNKIRYRAEQ 541
Query: 817 CIKMQKTIRMWLCKRRHKPRIDGLVKVGTLKKRLDKFNEVVSALKDGKPEVNRQIKNLEI 876
+ +QK+IRMW+C R+ KP+ + + KV +L+ +L+ +++V +K K +Q+K LE
Sbjct: 542 FVMIQKSIRMWICVRKFKPKYEMIQKVKSLQAQLNLMSQIVGQMKKDKETATKQVKELEA 721
Query: 877 SIDALMAKIKSTMMTREQIQKEYDALV 903
++ A + KI++T ++RE++ + + L+
Sbjct: 722 ALTAYIHKIRTTNISREEMSRTTNQLM 802
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 82/116 (70%)
Frame = +2
Query: 1003 LAQECRDRELALRIAQNESELISDEAQGDMALRRGPAVQATKAAAGTKKHDLSKWKYAEL 1062
L QE RDRELALR+A + + D + L R V+A + AA KK+DL KWKYAEL
Sbjct: 1109 LDQEHRDRELALRLAMEDQNAVEDVSLPP-PLPRSDEVRAMQQAAANKKYDLQKWKYAEL 1285
Query: 1063 RDTINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRNTETEQRAPKSVTDYDFAP 1118
RD INTSCD+ELL +CREEFHRRLKVYHAWKSKNK+R + E RAPK+V + P
Sbjct: 1286 RDAINTSCDLELLDSCREEFHRRLKVYHAWKSKNKRRTDKGEHRAPKAVEEAGSVP 1453
>25922
Length = 422
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = -2
Query: 401 GTKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETS--SYFIGVLDIA 458
KG ++ L V +++ ARDAL K +YS +F +V+R+N + + +GVLDI
Sbjct: 379 AVKGDMVTTDLSVSESSYARDALCKALYSRMFSWLVHRINDSIKVRGAQRTKVMGVLDIY 200
Query: 459 GFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLI 518
GFE FE+NSFEQF INYCNEKLQQ F E LKEEQE Y KEG+ V Y +N +LI
Sbjct: 199 GFEVFENNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIKEGIEWIHVEYFNNAVICELI 20
Query: 519 EVKLVG 524
E + G
Sbjct: 19 EKSVSG 2
>14047
Length = 882
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 59/72 (81%)
Frame = -1
Query: 1172 AHFDGPWIARQMELHPDKPPILLVAGKDDMEMCELNLEETGLTRKRGAEILPRQFEEIWE 1231
AHFDG WIARQME++PDKP ILL+AG DDM+MCEL+LEETGLTRK+GAEIL +FEE W
Sbjct: 882 AHFDGKWIARQMEVYPDKPAILLLAGVDDMQMCELSLEETGLTRKKGAEILENEFEEDWH 703
Query: 1232 RCGGIQYLQSAI 1243
+ G YL+ +
Sbjct: 702 KFNGATYLKKTL 667
>30605
Length = 336
Score = 97.4 bits (241), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/113 (48%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Frame = -3
Query: 311 LDDHGDFIRMCTAMKKIGLDDEGKLDLFRVVAGVLHLGNIDFE-EAGSTSGGCNLKNKSA 369
LDD DF AM ++G+ D K+ +F +VA VLHLGNI FE + T GGC + ++
Sbjct: 334 LDDVRDFKVCDEAMTRMGVSDADKMAIFMLVAAVLHLGNIAFEDDHDDTKGGCKVLEEAE 155
Query: 370 PSLEYCAELLGLDQDDLRVSLTTRVMLTTAGGTKGTVIKVPLKVEQANNARDA 422
SL A LLG+D+ +LR SLT+R+M +GG KG+ IKVPLK +A++ARDA
Sbjct: 154 DSLATAAVLLGVDKMELRDSLTSRIM--QSGGIKGSAIKVPLKPSEASSARDA 2
>05656
Length = 1621
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Frame = -2
Query: 733 LFCKALFKALGLNEVD-------YKFGLTKVFFRPGKFAE-----FDQIMKSDPDHLAEL 780
L CK +K GL +D ++FG K F P +F + F ++K PD L
Sbjct: 1368 LKCKPEYKVPGLYVIDSVVRQSRHQFGEDKDVFGP-RFTKNIVTTFQSLLKCPPDEKGRL 1192
Query: 781 VKRVNLW 787
++ +NLW
Sbjct: 1191 IRVLNLW 1171
>07324
Length = 1291
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 1068 TSCDIELLAACREEFHRRLKVYHAWKSKNKKRNTETEQRAPKSVTDYDFA 1117
T C +EL A E+FH VY K+K K + T Q + +DY F+
Sbjct: 304 TKCSVELNARVFEQFHDFKCVYTQLKNKTKNKQTNHPQNPMR*CSDYKFS 155
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|13386106|ref|NP_080899.1| nudix (nucleoside
diphosphate linked moiety X)-type motif 21 [Mus musculus]
(227 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06241 362 e-101
>06241
Length = 2064
Score = 362 bits (929), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/229 (76%), Positives = 193/229 (84%), Gaps = 10/229 (4%)
Frame = +2
Query: 8 RSQTGWPR-------GVNQFGNKYIQQTKP---LTLERTINLYPLTNYTFGTKEPLYEKD 57
R Q+GWPR G + + Y T LTLERT+NLYPL+NYTFGTKEPLYE+D
Sbjct: 11 RGQSGWPRDNKGPMSGGSSYSKAYNSSTSSPLNLTLERTVNLYPLSNYTFGTKEPLYERD 190
Query: 58 SSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDE 117
SSV ARFQRMREEFD++GMRR+VEGVLIVHEH LPHVLLLQLGTTFFKLPGGEL GE++
Sbjct: 191 SSVTARFQRMREEFDRMGMRRSVEGVLIVHEHGLPHVLLLQLGTTFFKLPGGELAAGEEQ 370
Query: 118 VEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLV 177
GLKRL+TE LGRQDG +WV++D IGNWWRPNFEPPQYPYIPAHITKPKEHK+LFLV
Sbjct: 371 TAGLKRLLTETLGRQDGAPMNWVVEDTIGNWWRPNFEPPQYPYIPAHITKPKEHKRLFLV 550
Query: 178 QLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIY 226
QL EKALFAVP+NYKLVAAPLFELYDN+ GYGPIISSLPQ L RFNFIY
Sbjct: 551 QLPEKALFAVPRNYKLVAAPLFELYDNSAGYGPIISSLPQALGRFNFIY 697
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|22122825|ref|NP_666355.1| actin-related protein 2
[Mus musculus]
(394 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01436 365 e-101
04742 343 8e-95
39562 279 1e-75
02757 161 1e-46
12322 175 3e-44
00608 121 6e-28
32273 91 7e-19
19721 55 3e-17
13361 68 7e-12
36954 67 1e-11
11487 52 5e-07
18926 50 2e-06
>01436
Length = 2563
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/201 (86%), Positives = 188/201 (93%)
Frame = +3
Query: 189 ITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPD 248
ITRYLIKLLLLRGYAFNHSADFETVRM+KEKLCY Y++EQEQKLALETTVLVE Y LPD
Sbjct: 3 ITRYLIKLLLLRGYAFNHSADFETVRMLKEKLCYTAYDVEQEQKLALETTVLVEPYILPD 182
Query: 249 GRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGST 308
GR+IKVGGERFEAPEALFQPHLINV+GVGVAELLFNTIQAAD+D R +FYKHIVLSGGST
Sbjct: 183 GRVIKVGGERFEAPEALFQPHLINVDGVGVAELLFNTIQAADMDIRPDFYKHIVLSGGST 362
Query: 309 MYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDK 368
MYPGLPSRLERE+KQLYLERVL GD +LSKFKIRIEDPPRRKHMVFLGG+V ADIMKDK
Sbjct: 363 MYPGLPSRLEREIKQLYLERVLXGDTSRLSKFKIRIEDPPRRKHMVFLGGSVXADIMKDK 542
Query: 369 DNFWMTRQEYQEKGVRVLEKL 389
D+FWM R EY+E GV+VL+KL
Sbjct: 543 DDFWMMRSEYEEMGVKVLDKL 605
>04742
Length = 2111
Score = 343 bits (879), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 238/381 (62%)
Frame = +2
Query: 8 VVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSM 67
+V DNG+G K G+AG + P +FP++VGRP R + + KD VGDEA R +
Sbjct: 113 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGI 286
Query: 68 LEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVM 127
L + YP+E+GIV NWDDM+ +W +TF E L + +LLTE P+NP NREK+ ++M
Sbjct: 287 LTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIM 463
Query: 128 FETYQFSGVYVAIQAVLTLYAQXXXXXXXXXXXXXXXHICPVYEGFSLPHLTRRLDIAGR 187
FET+ +YVAIQAVL+LYA H P+YEG++LPH RLD+AGR
Sbjct: 464 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYEGYALPHAISRLDLAGR 643
Query: 188 DITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP 247
D+T YL+K+L RGY+F +A+ E VR IKEKLCYV + EQE + A ++ L +SY LP
Sbjct: 644 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELP 823
Query: 248 DGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGS 307
DG++I +G ERF PEA+FQP + +E G E +N+I D+D R + Y + VLSGGS
Sbjct: 824 DGQVITIGNERFRCPEAMFQPSFLGMESAGXHETTYNSIMKCDVDIRKDLYANTVLSGGS 1003
Query: 308 TMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKD 367
TMYPG+ R+++E+ L KI+I PP RK+ V++GG++LA +
Sbjct: 1004TMYPGIADRMQKEITAL-----------APPTMKIKIIAPPERKYSVWIGGSILASLSTF 1150
Query: 368 KDNFWMTRQEYQEKGVRVLEK 388
+ W+++QEY E G ++ +
Sbjct: 1151Q-QMWISKQEYDESGPSIVHR 1210
>39562
Length = 1438
Score = 279 bits (714), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 192/311 (61%)
Frame = -2
Query: 78 IVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVY 137
IV NWDDM+ +W +TF E L + +LLTE P+NP NREK+ ++MFET+ +Y
Sbjct: 1437 IVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 1261
Query: 138 VAIQAVLTLYAQXXXXXXXXXXXXXXXHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLL 197
VAIQAVL+LYA H P+YEG++LPH RLD+AGRD+T YL+K+L
Sbjct: 1260 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 1081
Query: 198 LLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGE 257
RGY+F +A+ E VR IKEKL YV + EQE A ++ L +SY LPDG++I +G E
Sbjct: 1080 TERGYSFTTTAEREIVRDIKEKLDYVALDFEQEMLTAASSSSLEKSYELPDGQVITIGNE 901
Query: 258 RFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRL 317
RF PEA+FQP + +E G+ E +N+I D+D R + Y + VLSGGSTMYPG+ R+
Sbjct: 900 RFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRM 721
Query: 318 ERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQE 377
++E+ L KI+I PP RK+ V++GG++LA + W+++QE
Sbjct: 720 QKEITAL-----------APPTMKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQE 577
Query: 378 YQEKGVRVLEK 388
Y E G ++ +
Sbjct: 576 YDESGPSIVHR 544
>02757
Length = 1094
Score = 161 bits (408), Expect(2) = 1e-46, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 103/158 (65%)
Frame = -2
Query: 167 CPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYN 226
CP P RLD+AGRD+T YL+K+L RGY+F +A+ E V IKEKLCYV +
Sbjct: 1024 CPSTRVTPCPTAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVXDIKEKLCYVALD 845
Query: 227 IEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTI 286
EQE A ++ L +SY LPDG++I +G ERF PE+LFQP + +E G+ E +N+I
Sbjct: 844 FEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSI 665
Query: 287 QAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQL 324
D+D R + Y + VLSGG+TM+PG+ R+++E+ L
Sbjct: 664 MKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITAL 551
Score = 43.1 bits (100), Expect(2) = 1e-46, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = -3
Query: 338 SKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388
S KI+ PP RK+ V++GG++LA + W+++QEY E G ++ +
Sbjct: 543 STMKIKXIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPSIVHR 394
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 144 LTLYAQXXXXXXXXXXXXXXXHICPVYEGFSLPH 177
L+LYA H P+YEG++LPH
Sbjct: 1094 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPH 993
>12322
Length = 849
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 137/227 (60%), Gaps = 3/227 (1%)
Frame = +1
Query: 165 HICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVG 224
H PVYEGF++PH R+D+AGRD+TRYL LL G + +A+FE V+ IKE+ CY+
Sbjct: 7 HAVPVYEGFAMPHSIMRVDVAGRDVTRYLRLLLRKEGMDLHTTAEFEVVKHIKERTCYLS 186
Query: 225 YNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFN 284
N +E+ + E SYTLPDG ++VG RF APE LF+P LI E G+ E+L
Sbjct: 187 INPLKEESVDTEKV----SYTLPDGNTVEVGPARFRAPELLFRPDLIGEECEGIHEVLSY 354
Query: 285 TIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRI 344
+IQ +D+D R Y +IVLSGGST++ G RL ELK+L + + KIRI
Sbjct: 355 SIQKSDVDLRKTLYSNIVLSGGSTLFKGFGDRLLSELKKLAPKDI-----------KIRI 501
Query: 345 EDPPRRKHMVFLGGAVLADIMKDKDNF---WMTRQEYQEKGVRVLEK 388
P R + ++G ++LA + D F W++++EY E+GV+ + +
Sbjct: 502 SAPQERLYSTWIGXSILASL----DTFRKMWVSKREYHEEGVKAIHR 630
>00608
Length = 1930
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 165/330 (50%), Gaps = 25/330 (7%)
Frame = +3
Query: 78 IVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVY 137
I+ +WD M+ ++ + L + + LLTEPP+N +NRE E+MFE++ G+Y
Sbjct: 3 IIDDWDLMERFYEQVIF-KYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLY 179
Query: 138 VAIQAVLTLY--------AQXXXXXXXXXXXXXXXHICPVYEGFSLPHLTRRLDIAGRDI 189
+A+QAVL L + H+ PV EG+ + + + IAGRDI
Sbjct: 180 IAVQAVLALAASWTSRNVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 359
Query: 190 TRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQE-QKLALETTVLVESYTLPD 248
T ++ +LL R ET + IKE+ YV +I +E K + + ++ Y +
Sbjct: 360 TYFIQQLLREREVGIPPEQSLETAKAIKERFSYVCPDIAKEFSKYDTDPSKWMKKY---E 530
Query: 249 GR--------IIKVGGERFEAPEALFQPHLINVE-GVGVAELLFNTIQAADIDTRSEFYK 299
GR + VG ERF PE F P N + + +++++ + IQ ID R YK
Sbjct: 531 GRNTISKQLFSVDVGYERFLGPEIFFHPEFSNPDFTMPISDVVDDVIQNCPIDVRRGLYK 710
Query: 300 HIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIR---IEDPPRRKHM--- 353
+IVLSGGSTM+ +++R++K++ R LK E+LS+ +I+ IE HM
Sbjct: 711 NIVLSGGSTMFRDFGRKIQRDVKRVVDGR-LKAS-EELSQGRIKPKPIEVQVITHHMQRY 884
Query: 354 -VFLGGAVLADIMKDKDNFWMTRQEYQEKG 382
V+ GG++LA + T+ +Y E G
Sbjct: 885 AVWFGGSMLAS-TPEFYQVCHTKADYDEHG 971
>32273
Length = 265
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 59/82 (71%)
Frame = -2
Query: 67 MLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEV 126
++ + YPME+GIV++W+DM+ +W Y + ++L + +LLTE P+NP +NREK E+
Sbjct: 264 LMSIRYPMEHGIVKDWNDMERIWQYIYSKDQLQTFSEEHPVLLTEAPLNPRRNREKAAEI 85
Query: 127 MFETYQFSGVYVAIQAVLTLYA 148
F+T+ +++++QAVL+LYA
Sbjct: 84 FFDTFNVPALFISMQAVLSLYA 19
>19721
Length = 757
Score = 55.1 bits (131), Expect(2) = 3e-17, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Frame = +3
Query: 211 ETVRMIKEKLCYVGYNIEQE-------QKLALETTVLVESYTLPDGRIIKVGGERFEAPE 263
E + IKE+ YV +I +E + ++ + S PD VG E+F PE
Sbjct: 420 EAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKAHKMSGSSKYPDFSF-DVGYEKFLGPE 596
Query: 264 ALFQPHLINVE-GVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGL 313
F+P +N + +++++ IQ+ ID+R Y +IVLSGGS+M+ L
Sbjct: 597 VFFRPEFVNGDFQASISDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMFKHL 749
Score = 51.2 bits (121), Expect(2) = 3e-17, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Frame = +2
Query: 78 IVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVY 137
+V +WD + + + L + + LLTEPP+N +NRE E+MFET+ G+Y
Sbjct: 2 VVEDWDLHERFMEQAIF-KYLRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNIPGLY 178
Query: 138 VAIQAVLTLYA--------QXXXXXXXXXXXXXXXHICPVYEGFSLPHLTRRLDIAGRDI 189
+A+QAVL L A + H+ PV +G+ + + + IAGRDI
Sbjct: 179 IAVQAVLALAASWTSRPPNERTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDI 358
Query: 190 T 190
T
Sbjct: 359 T 361
>13361
Length = 1217
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Frame = +3
Query: 221 CYVGYNIEQE-QKLALETTVLVESYT-----LPDGRIIKVGGERFEAPEALFQPHLINVE 274
CY+ +I +E K E + + +YT + VG ERF PE F P N +
Sbjct: 42 CYICPDIAKEFAKYDSEPSKWIRNYTGMNTVTKQAFNVDVGYERFLGPEIFFHPEFSNPD 221
Query: 275 -GVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELK-----QLYLER 328
+ ++E++ N IQ ID R Y +IVLSGGSTM+ RL+R++K +L +
Sbjct: 222 FTIPLSEIVDNVIQNCPIDVRRHLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISE 401
Query: 329 VLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLA 362
L K +++ +++ V+ GG++LA
Sbjct: 402 NLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLA 503
>36954
Length = 892
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Frame = -1
Query: 8 VVVCDNGTGFVKCGYAGSNFPEHIFPALVG-RPIIRST--TKVGNI----EIKDLMVGDE 60
+V D G+ + GYAG + P+ P VG I +T T G+ E K L+
Sbjct: 805 ALVFDIGSYSFRAGYAGEDTPKAEIPTHVGVMEDIETTMDTDGGDAPPQPEKKYLIDTVY 626
Query: 61 ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNC--KILLTEPPMNPTK 118
R + +N +++G+V +WD + + DY + +I + +C +L++EP N
Sbjct: 625 MKHPRKGMHLNSFLKDGMVEDWDMFEKVIDYAY---NRSIKSESCLHPLLMSEPAWNTKA 455
Query: 119 NREKIVEVMFETYQFSGVYVAIQAVLTLYAQXXXXXXXXXXXXXXXHICPVYEGFSLPHL 178
REK+ E+MFE Y ++ +VL+ +A PVY+G+ L
Sbjct: 454 KREKLTEIMFEKYNIPAFFLRKNSVLSAFANGRSTALILDSGATHTSAVPVYDGYVLTQG 275
Query: 179 TRRLDIAGRDITR 191
+ +AG I R
Sbjct: 274 IVKSPLAGDFIAR 236
>11487
Length = 771
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = -1
Query: 280 ELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYL 326
E +N+I D+D R + Y + VLSGG+TM+PG+ R+++E QL+L
Sbjct: 771 ETAYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKE-SQLWL 634
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -2
Query: 314 PSRLERELKQL-YLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFW 372
P LE L L L K S + + P RK+ V++GG++LA + + W
Sbjct: 707 PCCLEARLCSLALLTECRKNHSSGSSHHEDQDHRSPERKYSVWIGGSILASLSTFQ-QMW 531
Query: 373 MTRQEYQEKGVRVLEK 388
+++QEY E G ++ +
Sbjct: 530 ISKQEYDESGPSIVHR 483
>18926
Length = 478
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Frame = +1
Query: 262 PEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL 321
P + P V GVG ++ ++ DID R Y ++ GG+++ G RL R+L
Sbjct: 58 PPSSRNPKATPVLGVG--HVVTTSVGMCDIDIRPSLYGGVIAVGGNSLIQGFTERLNRDL 231
Query: 322 KQLYLERVLKGDVEKLSKFK-IRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQE 380
+ K I R+ ++GG++LA + W+++QEY+E
Sbjct: 232 SN---------KTPPSMRLKIIAAASTAERRFSSWIGGSILAS-LGSFQQMWVSKQEYEE 381
Query: 381 KGVRVLEK 388
G +E+
Sbjct: 382 GGKSCVER 405
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981534|ref|NP_035314.2| proteasome (prosome,
macropain) subunit, alpha type 3 [Mus musculus]
(255 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
17033 363 e-101
20771 132 1e-31
02448 124 3e-29
24591 124 4e-29
14551 115 2e-26
00789 103 5e-23
04255 79 7e-21
37174 32 0.18
16035 30 0.97
>17033
Length = 2217
Score = 363 bits (932), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/232 (73%), Positives = 205/232 (88%)
Frame = -3
Query: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE 60
MSSIGTGYDLSAS FSPDGRVFQVEYA KAVENS TAIGIR KDGVV GVEKLV SKLYE
Sbjct: 2170 MSSIGTGYDLSASHFSPDGRVFQVEYAQKAVENSGTAIGIRGKDGVVMGVEKLVTSKLYE 1991
Query: 61 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV 120
+G+NKRLFN+DRH+G AVAGLLADAR L + A+EE+SN+R N+G +PLK+L DRVA YV
Sbjct: 1990 QGANKRLFNIDRHIGGAVAGLLADARQLMERAKEESSNYRFNYGSPVPLKYLTDRVAGYV 1811
Query: 121 HAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKRRQAAKTEIEKL 180
HAYTL+SAVRPFG S ++ SY A G Q+++++PSGVS+GY+GCAIGK +Q AKTEIEKL
Sbjct: 1810 HAYTLHSAVRPFGTSMIVASYDAV-GPQMFLVEPSGVSWGYYGCAIGKAKQTAKTEIEKL 1634
Query: 181 QMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGELTKGRHEIVPKDI 232
+MK++T +D+VKEVA+IIY+VHDEVKDK+FELELSWVGE T G+H++VPKD+
Sbjct: 1633 KMKDLTMQDLVKEVARIIYVVHDEVKDKSFELELSWVGEATGGKHQLVPKDV 1478
>20771
Length = 674
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 113/190 (59%), Gaps = 5/190 (2%)
Frame = +2
Query: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRL 67
YD +TFSP+GR+FQVEYA++A++ STAIGI+ +GVV VEK V S L E S +++
Sbjct: 101 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTNEGVVLAVEKRVTSSLIEPTSIEKI 280
Query: 68 FNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAY---- 123
VD+H+G A++GL+AD+R+L D AR EA N + N+ ++ + V+ A+
Sbjct: 281 MEVDKHIGCAMSGLIADSRTLIDRARVEAQNHWFTYNENMSVESVTQAVSNLALAFGDDD 460
Query: 124 -TLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKRRQAAKTEIEKLQM 182
+ RPFG + ++ +N G +L+ +DPSG Y AIG + A+ +++
Sbjct: 461 PDPGAMSRPFGVALLIAGVDSN-GPRLFHMDPSGTFIQYDAKAIGSGSEGAQQALQEQYH 637
Query: 183 KEMTCRDVVK 192
K +T +D K
Sbjct: 638 KSITLKDACK 667
>02448
Length = 1302
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%)
Frame = +2
Query: 2 SSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEE 61
+++ YD + + FSPDG +FQVEYA +AV+ STA+G+R + VV GVEK ++KL EE
Sbjct: 245 ATMSDRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGNNLVVLGVEKKAVAKLQEE 424
Query: 62 GSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVH 121
+ +++ +D HV +A AGL ADAR L + AR E + + + ++++ +A
Sbjct: 425 RTVRKIALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQ 604
Query: 122 AYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKRRQAAKTEIEKLQ 181
YT + RPFG S ++ + + LY DPSG + + IG+ + + +EK
Sbjct: 605 KYTQSNGRRPFGLSSLIIGFDYDGSPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHY 784
Query: 182 MKEMTCRDVVKEVAKI 197
E+ D KE K+
Sbjct: 785 TDEVAASD--KETIKL 826
>24591
Length = 1801
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 106/190 (55%)
Frame = +1
Query: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRL 67
YD + + FSPDG +FQVEYA +AV+ STA+G+R + VV GVEK ++KL EE + +++
Sbjct: 40 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGDNLVVLGVEKKAVAKLQEERTVRKI 219
Query: 68 FNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYS 127
+D HV +A AGL ADAR L + AR E + + + ++++ +A YT +
Sbjct: 220 ALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQKYTQSN 399
Query: 128 AVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKRRQAAKTEIEKLQMKEMTC 187
RPFG S ++ + + LY DPSG + + IG+ + + +EK E+
Sbjct: 400 GRRPFGLSSLIIGFDYDGTPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHYTDEVAA 579
Query: 188 RDVVKEVAKI 197
D KE K+
Sbjct: 580 SD--KETIKL 603
>14551
Length = 1344
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
Frame = +3
Query: 2 SSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEE 61
S++ Y S +TFSP G++ Q+EYA+ AV + ++GI+ +GVV EK S Y+E
Sbjct: 135 SNMTERYSFSLTTFSPSGKLVQIEYALAAVGAGAPSVGIKATNGVVLATEKKQKSVXYDE 314
Query: 62 GSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVH 121
S ++ + +++G+ +G+ D R L AR+ A ++ + IP L RVA +
Sbjct: 315 HSINKVETITKNIGIVYSGMGPDYRVLCRRARKLAEQYKRVYNEQIPTAQLVQRVAAVMQ 494
Query: 122 AYTLYSAVRPFGCSFMLGSYSANDGAQ-LYMIDPSGVSYGYWGCAIGKRRQAAKTEIEKL 180
+T VRPFG S ++ + +D LY DPSG + + A+GK KT +EK
Sbjct: 495 EFTQSGGVRPFGVSLLMAGWDEDDKKPFLYQCDPSGAYFAWKATAMGKNHINGKTFLEKR 674
Query: 181 QMKEMTCRDVV 191
+ + D V
Sbjct: 675 YSETLELEDAV 707
>00789
Length = 1584
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 1/184 (0%)
Frame = +1
Query: 2 SSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEE 61
S + YD + FSP+GR++QVEYAM+A+ ++ T +GI KDG+V E+ +KL +E
Sbjct: 16 SKMARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILAKDGIVLAAERRNTNKLLDE 195
Query: 62 GS-NKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV 120
S +++++ + + +VAG+ +DA L + R A + + IP + + +
Sbjct: 196 VSYSEKIYRLSDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQVVATLCDIK 375
Query: 121 HAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKRRQAAKTEIEKL 180
AYT + RPFG S + + + G QLY DPSG +YG W A + K
Sbjct: 376 QAYTQFGGKRPFGVSILYMGWDKHYGFQLYQSDPSG-NYGGWKATCIGNNSANAVSLLKQ 552
Query: 181 QMKE 184
+ KE
Sbjct: 553 EYKE 564
>04255
Length = 1758
Score = 79.3 bits (194), Expect(2) = 7e-21, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%)
Frame = -2
Query: 54 VLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLA 113
V KL + + L+++ +G + G++AD++S AR EA+ ++ +GY+IP+ L
Sbjct: 1466 VPDKLLDPTTVTHLYSLTERIGCVMTGMIADSQSQVQRARYEAAKWKYTYGYDIPVDMLC 1287
Query: 114 DRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKRRQAA 173
R+A YT + +RP GC +L Y G ++Y DP+G G+ + G ++ A
Sbjct: 1286 KRIANINQVYTQSAEMRPLGCCMILIGYDDEKGPEVYKTDPAGYYCGFKATSAGSKQLEA 1107
Query: 174 KTEIEK 179
+EK
Sbjct: 1106 NGFLEK 1089
Score = 38.1 bits (87), Expect(2) = 7e-21, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 15 FSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEK 52
SP+GR++QVEYA KA+ T++ +R KD V +K
Sbjct: 1585 LSPEGRLYQVEYAFKAINQGGLTSVAVRGKDSAVIVTQK 1469
>37174
Length = 146
Score = 32.3 bits (72), Expect = 0.18, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 17 PDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFG 49
P ++ Q+EYA+ AV + +GI+ +GVV G
Sbjct: 43 PTAQLVQIEYALAAVGAGAPVVGIKATNGVVLG 141
>16035
Length = 1206
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Frame = +2
Query: 137 MLGSYSANDGAQLYM--------IDPSGVSYGYWGCAIGKRRQAAK 174
M G +A++G +YM + P+G SYG +G I + ++A+
Sbjct: 1010 MFGGAAADEGKAMYMDAFRRLNSLGPAGSSYGQFGSTIQPQNESAE 1147
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|51491845|ref|NP_001003908.1| clathrin, heavy
polypeptide (Hc) [Mus musculus]
(1675 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
32593 305 e-101
30738 200 4e-51
34414 195 1e-49
23440 32 1.7
14635 31 3.9
>32593
Length = 904
Score = 305 bits (781), Expect(2) = e-101, Method: Composition-based stats.
Identities = 139/175 (79%), Positives = 155/175 (88%)
Frame = +2
Query: 83 KAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMF 142
++GKTLQIFNIEMKSKMKAHTMT++V FWKWIS+N + LVTD AVYHW+MEG+SQP K+F
Sbjct: 119 QSGKTLQIFNIEMKSKMKAHTMTEEVIFWKWISVNIIGLVTDQAVYHWTMEGDSQPQKVF 298
Query: 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFA 202
DRHS+L GCQIINYRTDAKQ+WLLL GISAQQNRVVGAMQLYSV+RKVSQPIEGHAA+FA
Sbjct: 299 DRHSNLTGCQIINYRTDAKQQWLLLVGISAQQNRVVGAMQLYSVERKVSQPIEGHAAAFA 478
Query: 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ 257
+EGN + STLF FAVRG GGKLH+IEVG PP GNQ F KKAVDVFFP EAQ
Sbjct: 479 THTVEGNPQPSTLFMFAVRGPQGGKLHVIEVGQPPQGNQAFTKKAVDVFFPVEAQ 643
Score = 84.0 bits (206), Expect(2) = e-101, Method: Composition-based stats.
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +3
Query: 44 VGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGK 86
VGE AQVVIIDMND +NPIRRPISADSAIMNPASKVIALKAGK
Sbjct: 3 VGETAQVVIIDMNDSANPIRRPISADSAIMNPASKVIALKAGK 131
Score = 167 bits (422), Expect = 5e-41, Method: Composition-based stats.
Identities = 81/124 (65%), Positives = 93/124 (75%)
Frame = +1
Query: 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 280
+G GG+ GT + +++ P +DFPVAMQ S+KH VVFLITKYG
Sbjct: 532 QGPTGGQAPCD*GGTASSRQPGVHQESCGCVLPCGGSDDFPVAMQTSQKHGVVFLITKYG 711
Query: 281 YIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITN 340
YIHLYD+ETGTCIYMNRISG+TIFVTA HEAT+GIIGVNRKGQVLSV VEEENI+ YITN
Sbjct: 712 YIHLYDIETGTCIYMNRISGDTIFVTASHEATSGIIGVNRKGQVLSVSVEEENIVSYITN 891
Query: 341 VLQN 344
LQN
Sbjct: 892 TLQN 903
>30738
Length = 425
Score = 200 bits (509), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/136 (73%), Positives = 105/136 (77%)
Frame = +1
Query: 375 GNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLE 434
Y EAAK APKGILRTP TI+RFQ VP G TSPLLQYFGILLD+GQLNKYESLE
Sbjct: 19 AQYQEAAKSPPRAPKGILRTPQTIQRFQQVPTTSG-TSPLLQYFGILLDKGQLNKYESLE 195
Query: 435 LCRPVLQQGRXXXXXXXXXXXXXXCSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAE 494
LCRPVLQQGR C EELGDLVK+ DPTLALSVYLRANVP KVIQCFAE
Sbjct: 196 LCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKTADPTLALSVYLRANVPQKVIQCFAE 375
Query: 495 TGQVQKIVLYAKKVGY 510
TGQ QKI+LYAKKVG+
Sbjct: 376 TGQFQKIILYAKKVGF 423
>34414
Length = 384
Score = 195 bits (496), Expect = 1e-49, Method: Composition-based stats.
Identities = 96/127 (75%), Positives = 104/127 (81%)
Frame = +3
Query: 380 AAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPV 439
AAKVAA+APKGILRTP TI+RFQ VP+ G TSPLLQYFGILLD+GQLNKYESLELCRPV
Sbjct: 3 AAKVAASAPKGILRTPQTIQRFQQVPSTAGTTSPLLQYFGILLDKGQLNKYESLELCRPV 182
Query: 440 LQQGRXXXXXXXXXXXXXXCSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQ 499
LQQGR C EELGDLVK+ DPTLALSVYLRA+VP KVIQCFAETGQ Q
Sbjct: 183 LQQGRKQLLEKWLKEDKLECCEELGDLVKAADPTLALSVYLRASVPQKVIQCFAETGQFQ 362
Query: 500 KIVLYAK 506
KI+LY+K
Sbjct: 363 KIILYSK 383
>23440
Length = 2048
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +3
Query: 576 SEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYD-RAHIAQL-CEKAGLLQRA-LEHFTD 632
S G LQ + + N+ H P AD I + ++ +I++L C+ LL + L+H T
Sbjct: 279 SRGCLQRHMNKCNMYHPP--ADEIYRQGSLSVFEVDGNISKLYCQNLCLLAKLFLDHKTL 452
Query: 633 LYDIKRAVVHTHLLNPEW---LVNYFG 656
YD++ + + +N EW +V YF
Sbjct: 453 YYDVEPFLFYVLTVNDEWGSHIVGYFS 533
>14635
Length = 1002
Score = 31.2 bits (69), Expect = 3.9, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 372 FAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQL 427
F+ ++S A + P G+L TP+ +++ SV + P P+L + +L+ GQL
Sbjct: 172 FSPPSFSTTAPLCRPLPLGVLHTPEIVKQSFSVKSAP---KPVLMKWFLLVFPGQL 14
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6754724|ref|NP_034947.1| proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 [Mus musculus]
(321 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14533 364 e-101
20649 210 7e-55
13866 42 5e-04
02425 30 1.6
05855 29 2.5
15076 28 5.2
>14533
Length = 1436
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 170/230 (73%), Positives = 200/230 (86%)
Frame = -2
Query: 54 FAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMK 113
F PFDEDDKD +VWFLDHDYLENMYGMFKKVNARE++VGWYHTGPKLH NDIAINE+++
Sbjct: 1306 FFSPFDEDDKDRNVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHHNDIAINEMIR 1127
Query: 114 RYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIXXXXXXXXXXX 173
+YCPNSVLV+ID KPKDLGLPTE YI+VEEVHDDG+PT+KTF+HV S+I
Sbjct: 1126 KYCPNSVLVVIDAKPKDLGLPTEGYIAVEEVHDDGSPTTKTFDHVPSDIGAEEAEEVGVE 947
Query: 174 HLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVASGKLPINHQIIYQLQDV 233
HLLRDIKDTTVGTLSQRIT+Q+ GLKGL+S + +I SY+ KV SGKLPINHQ++Y LQD+
Sbjct: 946 HLLRDIKDTTVGTLSQRITSQLMGLKGLHSHIREIDSYVGKVVSGKLPINHQVVYLLQDI 767
Query: 234 FNLLPDASLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANR 283
FNLLPD L +FV++ ++KTNDQM+VVYLASLIRSV+ALHNLI+NKI NR
Sbjct: 766 FNLLPDVKLADFVRSMHIKTNDQMLVVYLASLIRSVIALHNLIDNKIQNR 617
>20649
Length = 549
Score = 210 bits (534), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 95/114 (83%), Positives = 107/114 (93%)
Frame = -3
Query: 21 DHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYG 80
DHFNR+GKVGN KRVVGVLLG+ + +LDVSNSFAVPFDEDDKD +VWFLDHDYLENMYG
Sbjct: 343 DHFNRMGKVGNVKRVVGVLLGANKGGILDVSNSFAVPFDEDDKDRNVWFLDHDYLENMYG 164
Query: 81 MFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLP 134
MFKKVNARE++VGWYHTGPKLH NDIAINE++++YCPNSVLV+ID KPKDLGLP
Sbjct: 163 MFKKVNAREKVVGWYHTGPKLHHNDIAINEMIRKYCPNSVLVVIDAKPKDLGLP 2
>13866
Length = 855
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Frame = -2
Query: 27 GKVGNQKRVVGVLLGS----WQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMF 82
G+ G V+G++LG + +V+DV FA+P + SV +D + M M
Sbjct: 656 GRAGVPMEVMGLMLGEFVDDYTVRVIDV---FAMP--QSGTGVSVEAVDPVFQAKMLDML 492
Query: 83 KKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVIID 125
K+ E +VGWYH+ P L DI + + +V V++D
Sbjct: 491 KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 351
>02425
Length = 1374
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 225 QIIYQLQDVFNLLPDASLQEFVKAFYLKTNDQMVVVYLASLI 266
+IIY LQ++F + + + K YLKT++ ++Y I
Sbjct: 652 RIIYSLQELFIYFSLSFINSYSKNIYLKTSNLGTIIYFCCFI 527
>05855
Length = 1374
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 195 VHGLKGLNSKLLDIRSYLEKVASGKLPINHQIIYQLQDVFNLLPDASLQEFVKAFYLKTN 254
+ GLK +KL + + K + NH+II+ + FN+ + F+K F KT
Sbjct: 378 IAGLKKTANKLTYEHANMHKRTNQSYQTNHKIIFLYKRGFNIYFNRGKHRFIKWF*KKTC 557
Query: 255 DQMV 258
++
Sbjct: 558 GGLI 569
>15076
Length = 2760
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 215 VASGKLPINHQIIYQLQDVFNLLPDASLQE 244
V G P+NHQ++Y DV + L +L +
Sbjct: 248 VNHGFFPVNHQLLYDFLDVLHFLALVTLDD 159
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|7948999|ref|NP_058044.1| peroxiredoxin 4 [Mus
musculus]
(274 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09130 363 e-101
10721 280 3e-76
09123 62 3e-10
>09130
Length = 1000
Score = 363 bits (932), Expect = e-101, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 191/222 (86%)
Frame = +1
Query: 51 ENECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVINGEFKELKLTDYR 110
E C+ YAGG V+P E R S HS+ S+A ISKPAP W GTAVI+GEFK++KL+D+R
Sbjct: 106 EESCYSYAGGSVFPQETRRTS--GHSIQWSQAVISKPAPDWNGTAVIDGEFKDIKLSDFR 279
Query: 111 GKYLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTEVVACSVDSQFTHLAWINTPRRQG 170
GKYLVFFFYPLDFTFVCPTEI+AF D + +FKSINTEVVACSVDSQFTHLAWINTPR QG
Sbjct: 280 GKYLVFFFYPLDFTFVCPTEIVAFSDNVGKFKSINTEVVACSVDSQFTHLAWINTPRNQG 459
Query: 171 GLGPIRIPLLSDLNHQISKDYGVYLEDSGHTLRGLFIIDDKGVLRQITLNDLPVGRSVDE 230
GLGP++IPLLSD+ H I+K YGVYL+D GH+LRGLFIID KG+LRQIT+NDLPVGRSVDE
Sbjct: 460 GLGPLKIPLLSDITHDIAKAYGVYLQDLGHSLRGLFIIDPKGILRQITMNDLPVGRSVDE 639
Query: 231 TLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDK 272
TLRLVQAFQYTD HGEVCP GWKPGS+TIIPDP KYF+K
Sbjct: 640 TLRLVQAFQYTDAHGEVCPVGWKPGSDTIIPDPKQSKKYFNK 765
>10721
Length = 1542
Score = 280 bits (717), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 156/197 (79%)
Frame = -2
Query: 78 HLSKAKISKPAPYWEGTAVINGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDR 137
+ + I KPAP + AV++G+FK +KL+DY+GKY+V FFYPLDFTFVCPTEIIAF DR
Sbjct: 1469 QIGQLAIQKPAPEFSVQAVVDGDFKTVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDR 1290
Query: 138 IEEFKSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLNHQISKDYGVYLED 197
+EEF+SI EV+A S DS F+HLAW+NTPR+QGGLG ++IPLL+D ++S+ YG ED
Sbjct: 1289 VEEFRSIQCEVLAASTDSVFSHLAWVNTPRKQGGLGNMKIPLLADKTLELSRMYGCLKED 1110
Query: 198 SGHTLRGLFIIDDKGVLRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSE 257
G R L+IIDDKG LRQIT+NDLPVGRSVDETLRLVQAFQ+TDKHGEVCPAGWKPG++
Sbjct: 1109 EGIAYRALYIIDDKGTLRQITMNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGAD 930
Query: 258 TIIPDPAGKLKYFDKLN 274
TI P +F K N
Sbjct: 929 TIKPSVKDSKTFFSKAN 879
>09123
Length = 1944
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Frame = -3
Query: 113 YLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTEVVACSVDSQFTHLAWINTPRRQGGL 172
+ + F +P D+T VC TE+ + I EF+ +V A S D +H W ++ G+
Sbjct: 1606 WAILFSHPADYTPVCTTELGRVLNLIGEFEKRKCKVFALSCDGPESHKGWAKDVQKYAGV 1427
Query: 173 G---PIRIPLLSDLNHQISKDYGVYLEDSGH--------TLRGLFIIDDKGVLRQITLND 221
P+++D ++ G+ D T R +FII L+ L
Sbjct: 1426 DTDTKFPYPIIADEKRDLAVQLGMV--DPAEKTKDGLPLTCRAVFIIGPDKKLKLSLLYP 1253
Query: 222 LPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETII 260
GR+ DE LR++ + Q T P W+PG + ++
Sbjct: 1252 ATTGRNFDEILRVLDSLQLTATKKVATPENWQPGGKCMV 1136
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|114145493|ref|NP_062640.2| NS1-associated protein 1
isoform 1 [Mus musculus]
(623 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28652 360 e-100
31265 138 6e-33
11687 62 8e-10
17905 59 5e-09
03000 59 6e-09
17775 59 8e-09
39083 57 3e-08
21096 54 1e-07
03406 52 7e-07
23322 50 4e-06
17681 49 6e-06
25691 47 2e-05
16016 44 2e-05
08670 46 4e-05
31310 46 6e-05
12350 45 7e-05
02415 45 9e-05
31618 43 3e-04
30672 43 4e-04
00556 42 5e-04
08958 42 5e-04
16427 42 5e-04
19868 42 0.001
01278 41 0.001
00817 40 0.002
23250 40 0.003
11019 40 0.003
00029 39 0.005
04988 39 0.005
00302 39 0.005
23720 39 0.006
33516 39 0.006
02140 38 0.010
35180 37 0.018
25632 37 0.019
01937 37 0.021
32386 37 0.026
17175 36 0.036
12506 36 0.046
29364 35 0.064
24983 35 0.073
26197 35 0.077
30934 35 0.098
03903 34 0.14
01065 33 0.30
25950 33 0.33
00738 33 0.34
28605 32 0.67
11126 31 1.7
05273 30 2.1
02809 30 2.1
20169 30 2.9
00781 30 3.1
13457 28 7.7
19556 28 8.7
>28652
Length = 918
Score = 360 bits (925), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 233/310 (75%), Gaps = 1/310 (0%)
Frame = -2
Query: 95 LCGVMKTYRQREKQGTKVADSSKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYS 154
LCG MK + + G +K PDEAKI+A+L+RTGY LDVTTGQRKYGGPPP ++
Sbjct: 917 LCGKMKNLKTK---GAGGGAQTKKPDEAKIQAILKRTGYELDVTTGQRKYGGPPPG--WT 753
Query: 155 GQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKE 214
QP G E+F GKIPRD+FEDEL+PLFE G IWDLRLMMDP++ LNRGY FVT+ TKE
Sbjct: 752 DPQPGSGHEVFCGKIPRDIFEDELIPLFEDCGTIWDLRLMMDPVSNLNRGYCFVTYTTKE 573
Query: 215 AAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVI 274
AA EAVK ++ +EIR GK + V IS+ N RLFVG+IPKSKTKE+IL+EF K +EGL DVI
Sbjct: 572 AAAEAVKQHDGYEIRKGKKLKVNISIPNLRLFVGNIPKSKTKEEILKEFEKHSEGLMDVI 393
Query: 275 LYHQPDDKK-KNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEV 333
+Y D+ K KNRGF FLEY+ HK A+ A+RR +G+ +VW V+WAD E+P+ E
Sbjct: 392 VYGSADNPKLKNRGFAFLEYDTHKNASAAKRRFTTGRFRVWQCDVIVDWADLQEEPNEET 213
Query: 334 MAKVKVLFVRNLANTVTEEILEKSFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNG 393
M+KVKVL+VRNL VTE+ L++ F +GK+ERVKK+KDY F+H+++R+ A+KA+++++G
Sbjct: 212 MSKVKVLYVRNLTGDVTEDDLKEKFGAYGKVERVKKIKDYGFVHYEDREDALKALDDLHG 33
Query: 394 KDLEGENIEI 403
+ + I++
Sbjct: 32 EKIGNLEIDV 3
>31265
Length = 540
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 93/129 (72%), Gaps = 3/129 (2%)
Frame = +2
Query: 286 RGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNL 345
RGF F+EY H+ AA ARR+L+ G++++WG+ V+WA+P +D D + M++VK+L VRNL
Sbjct: 2 RGFAFVEYTSHRAAAMARRKLIPGRIQLWGHQIAVDWAEPEQDVDEDTMSQVKILXVRNL 181
Query: 346 ANTVTEEILEKSFSQFG---KLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIE 402
T TEE L+ FS+ ++ERVKK++DYAF+HF R+ A+KAM+ +G +EG +E
Sbjct: 182 MLTTTEETLKDVFSRAAGGREIERVKKIRDYAFVHFRSREDAIKAMDVTDGSTIEGSQVE 361
Query: 403 IVFAKPPDQ 411
+V AKP D+
Sbjct: 362 VVLAKPVDK 388
>11687
Length = 676
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Frame = +3
Query: 148 PPDSVYSGQQPSVGT-EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYA 206
P V S +P + ++FVG+IPR++ E+EL +FE GP+ L ++ D TG ++G
Sbjct: 105 PSTQVTSQGEPDADSIKMFVGQIPRNMDENELRKMFEDYGPVHSLNILRDKNTGQSKGCC 284
Query: 207 FVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANN------------RLFVGSIPKSK 254
FVTF T++AA +A +N + H V + A++ +LFVG + K
Sbjct: 285 FVTFFTRKAALDAQNALHNVKTMPMMHHPVQMKPADSEKRNGERNVEERKLFVGMLSKKL 464
Query: 255 TKEQI---LEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQA 302
++ + E F + + +L D +RG F+ + + A +
Sbjct: 465 SENDVRMLFESFGSIDDC---TVLR---DSNGTSRGCAFITFASRQCAMNS 599
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +3
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
++FVG + + L E+++ LFE G I D ++ D G +RG AF+TF +++ A ++K
Sbjct: 432 KLFVGMLSKKLSENDVRMLFESFGSIDDCTVLRDS-NGTSRGCAFITFASRQCAMNSIKG 608
Query: 223 YNNHEIRSG 231
++ + G
Sbjct: 609 MHHSQTMEG 635
>17905
Length = 454
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 24 SENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDG 72
+E++ LL+ GL +KVA KLDEIY G +AH++LDERA++ALKEF DG
Sbjct: 148 TEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELDERALDALKEFPVDG 2
>03000
Length = 778
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Frame = +3
Query: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223
+F+G + + ED L FE G I D +M D + +RG+ F+T+ E+ +A +
Sbjct: 93 LFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQA-QAN 269
Query: 224 NNHEIRSGKHIGVC------------ISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLT 271
H+I G+ + + + ++FVG + + T++ I + F++ E +T
Sbjct: 270 RPHKI-DGREVDTKRAMPREESGRSEVQQSVKKMFVGGVKEDTTEDMIRDTFNEFGE-IT 443
Query: 272 DVILYHQPDDKKKNRGFCFLEYEDHKTAAQA---RRRLMSGK 310
V L Q KNRGFCF+ + DH + +A +R ++G+
Sbjct: 444 GVDLI-QDKGTGKNRGFCFVTFGDHDSVDKAVLKKRHDLNGR 566
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
Frame = +3
Query: 244 RLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQAR 303
+LF+G + ++ + F E + D I+ + K++RGF F+ Y+D ++ QA+
Sbjct: 90 KLFIGGLSYETDEDSLRSHFETWGE-IVDCIVMRDSN-SKRSRGFGFITYKDAESIDQAQ 263
Query: 304 RRLMSGKVKVWGNVGTVEWADPIEDPD-PEVMAKVKVLFVRNLANTVTEEILEKSFSQFG 362
+ K+ G + A P E+ EV VK +FV + TE+++ +F++FG
Sbjct: 264 ---ANRPHKIDGREVDTKRAMPREESGRSEVQQSVKKMFVGGVKEDTTEDMIRDTFNEFG 434
Query: 363 KLERVKKLKD--------YAFIHFDERDGAVKAMEEMNGKDLEGENIEI 403
++ V ++D + F+ F + D KA+ + DL G +E+
Sbjct: 435 EITGVDLIQDKGTGKNRGFCFVTFGDHDSVDKAVLKKR-HDLNGRQVEV 578
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = +3
Query: 147 PPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYA 206
P +S S Q SV ++FVG + D ED + F + G I + L+ D TG NRG+
Sbjct: 318 PREESGRSEVQQSV-KKMFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFC 494
Query: 207 FVTFCTKEAAQEAVKLYNNHEIRSGKHIGV 236
FVTF ++ +AV L H++ +G+ + V
Sbjct: 495 FVTFGDHDSVDKAV-LKKRHDL-NGRQVEV 578
>17775
Length = 1282
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 33/307 (10%)
Frame = -2
Query: 146 GPPPDSVYSGQQPSVGTE----IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGL 201
G P ++S + PSV +F+ + + + L F G I ++ D
Sbjct: 990 GRPIRIMWSQRDPSVRKSGVGNVFIKNLDKTIDNKALYDTFSAFGNILSCKIACDEQG-- 817
Query: 202 NRGYAFVTFCTKEAAQEAVKLYNNHEIRSGK-HIGVCISVANNRLFVGSIPKSKTKEQIL 260
++GY FV F T+EAA++A+ N + K ++G I + +G K + +
Sbjct: 816 SKGYGFVHFETEEAARQAIDKVNGMLLNGKKVYVGRFIPRKERIMMMGDKLK-RFNNVYV 640
Query: 261 EEFSKVTEGLTDVILYHQP-----------DDKKKNRGFCFLEYEDHKTAAQARRRL--- 306
+ F T L Q + K+RGF F+ +E+ + A +A +
Sbjct: 639 KNFC*GTG*RPAA*LVWQARQDHLXXGACRGEDGKSRGFGFVSFEEPEGAEKAVDEINGT 460
Query: 307 -MSGKVKVWGNVGT-----VEWADPIEDPDPEVMAKVK--VLFVRNLANTVTEEILEKSF 358
+SG++ G E + E E + + + L+V+NL +++ +E L K F
Sbjct: 459 EVSGRIIYCGRAQKRAERQAELKERFEKIKLERINRYQGVNLYVKNLDDSIDDERLRKEF 280
Query: 359 SQFGKLERVKKL------KDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQK 412
S FG + K + K + F+ F + A KA+ EMNG+ + + + + A Q+
Sbjct: 279 SNFGTITSAKIMTEGGRSKGFGFVCFSSPEEATKAVTEMNGRIIVAKPLYVALA----QR 112
Query: 413 RKERKAQ 419
+++R+AQ
Sbjct: 111 KEDRRAQ 91
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 23/280 (8%)
Frame = -2
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
++VG + D+ E L F AGP+ +R+ D +T + GYA+V F A+ A+
Sbjct: 1191 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 1012
Query: 223 YNNHEIRSGKHIGVCIS----------VANNRLFVGSIPKSKTKEQILEEFSKVTEGLTD 272
N ++ G+ I + S V N +F+ ++ K+ + + + FS L+
Sbjct: 1011 MNFDTVK-GRPIRIMWSQRDPSVRKSGVGN--VFIKNLDKTIDNKALYDTFSAFGNILSC 841
Query: 273 VILYHQPDDKKKNRGFCFLEYEDHKTAAQARRR----LMSG-KVKVWGNVGTVEWADPIE 327
I D++ ++G+ F+ +E + A QA + L++G KV V + E +
Sbjct: 840 KIAC----DEQGSKGYGFVHFETEEAARQAIDKVNGMLLNGKKVYVGRFIPRKERIMMMG 673
Query: 328 DPDPEVMAKVKVLFVRNL--------ANTVTEEILEKSFSQFGKLERVKKLKDYAFIHFD 379
D + + ++V+N A + + + K + + F+ F+
Sbjct: 672 DK----LKRFNNVYVKNFC*GTG*RPAA*LVWQARQDHLXXGACRGEDGKSRGFGFVSFE 505
Query: 380 ERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQ 419
E +GA KA++E+NG ++ G I A QKR ER+A+
Sbjct: 504 EPEGAEKAVDEINGTEVSGRIIYCGRA----QKRAERQAE 397
>39083
Length = 1400
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = -3
Query: 564 KRKADG-YNQPDTKRRQTNNQNWGSQPIAQQPL-QGGDHSGNYGYKSENQEFYQDTFGQQ 621
KRKA ++Q TKR T NWG++PIAQQPL Q G SG Y Y + ++YQD+FGQ
Sbjct: 1200 KRKAGSDFSQGVTKRPYTRAGNWGNEPIAQQPLDQSGYGSGGYDYSGNDAQWYQDSFGQN 1021
Query: 622 W 622
W
Sbjct: 1020 W 1018
>21096
Length = 1186
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +3
Query: 314 WGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERVKKL--K 371
+ N+ + P+ + D V VK LFV +V E +L +FS+FG L V L +
Sbjct: 12 YCNIA-LPLTQPLVNDDSTV---VKRLFVVCQPGSVPERVLRDAFSRFGNLISVYLLSGR 179
Query: 372 DYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQ 411
+Y + + + A+KA++ ++G+ L G+ ++++ A+PP Q
Sbjct: 180 NYGYAKYANHESAMKALQTLHGQSLSGQRLKVLEAEPPKQ 299
>03406
Length = 1292
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Frame = +3
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
+IFVG + + L FEK G + L D +G +RG+ FV F KEAA +
Sbjct: 243 KIFVGGLSWETXSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVF--KEAATVDAVV 416
Query: 223 YNNHEIRSGKHIGVCISVANNR-----LFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277
N G+ I AN R +FVG + +E + F+K V+
Sbjct: 417 KNKEHKLQGRKIDP--KPANPRKGMRKIFVGKLDPGVPQEDVESYFAK----FGKVVNVE 578
Query: 278 QPDDKKKN--RGFCFLEYEDHKTAAQA 302
P DK K+ R FCF+E+++ KT +
Sbjct: 579 LPYDKVKDQRRAFCFVEFDNDKTVKKV 659
>23322
Length = 471
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%)
Frame = -2
Query: 147 PPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYA 206
P +S S Q SV ++FVG + D ED + F + G I + L+ D TG NRG+
Sbjct: 452 PREESGRSEVQQSV-KKMFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFC 276
Query: 207 FVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRL 245
FVTF ++ +AV L H++ +G+ + V + + N +
Sbjct: 275 FVTFGDHDSVDKAV-LKKRHDL-NGRQVEVKKAQSKNDM 165
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = -2
Query: 244 RLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQA 302
++FVG + + T++ I + F++ E +T V L Q KNRGFCF+ + DH + +A
Sbjct: 407 KMFVGGVKEDTTEDMIRDTFNEFGE-ITGVDLI-QDKGTGKNRGFCFVTFGDHDSVDKA 237
>17681
Length = 964
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +2
Query: 150 DSVYSGQQPSVGTEIFVGKIPRDLFEDELV-PLFEKAGPIWDLRLMMDPLTGLNRGYAFV 208
+ VY+ P+ T ++ G P ++ DEL+ F + GPI D+R+ D +G+AF+
Sbjct: 389 EEVYNQSSPT-NTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD------KGFAFI 547
Query: 209 TFCTKEAAQEAVKLYNNHEIRSGKHI 234
F TKEAA A++ + E+ G H+
Sbjct: 548 KFVTKEAAARAIEHTHISEVH-GNHV 622
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = +2
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
IFVG + ++ + L F G I + R++ DP T ++GYAFV+F K A+ A++
Sbjct: 35 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQA 214
Query: 223 YNNHEIRS 230
N I S
Sbjct: 215 MNGQWIGS 238
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Frame = +2
Query: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391
+FV +L+ + E L ++F+ FG++ + ++D YAF+ F ++ A A++ M
Sbjct: 38 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAM 217
Query: 392 NGKDLEGENIEIVFAK----PPDQKRK 414
NG+ + +I ++ PP + K
Sbjct: 218 NGQWIGSRSIRTNWSTRKLPPPRESSK 298
>25691
Length = 768
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = -2
Query: 161 GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAV 220
G +++ +P+ L + +L LF G I R++ D TGL++G F+ F + A+ A+
Sbjct: 263 GANLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIEAERAI 84
Query: 221 KLYNNH 226
+ NNH
Sbjct: 83 QKLNNH 66
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = -2
Query: 191 LRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYN-----NHEIRSGKHIGVCISVANNRL 245
+L+ D TG + GY FV + +E A +A+ N N I+ C S+ L
Sbjct: 431 CKLIRDKPTGQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLARPSCESIKGANL 252
Query: 246 FVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGF 288
++ +PKS T+ + F+ +T ILY Q K GF
Sbjct: 251 YISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGF 123
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = -2
Query: 373 YAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKP 408
Y F+++ ++ A KA+ +NG L+ + I++ A+P
Sbjct: 389 YGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLARP 282
>16016
Length = 1364
Score = 43.9 bits (102), Expect(2) = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Frame = -2
Query: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223
+F+G + D E L FEK G I + ++ DP T +R ++F+TF E E V+
Sbjct: 1303 VFIGGMHPDTDESSLRSYFEKYGDIRECIVVKDPATKRSRCFSFITFGNAENVDE-VQKD 1127
Query: 224 NNHEIRSGKHIGVCISVA---------NNRLFVGSIPKSKTKEQILEEFS-KVTE 268
H I G+ + ++ ++FVG + T+E + +EF+ K+TE
Sbjct: 1126 RPHTI-DGRTVETKRAMPREDTENHHQTKKMFVGGLKDDTTEEMLRKEFTGKITE 965
Score = 22.7 bits (47), Expect(2) = 2e-05, Method: Compositional matrix adjust.
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 286 RGFCFLEYEDHKT 298
RGFCF+ ++D T
Sbjct: 929 RGFCFVSFDDCDT 891
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Frame = -2
Query: 242 NNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEY---EDHKT 298
N ++F+G + T E L + + + + I+ P K++R F F+ + E+
Sbjct: 1312 NRKVFIGGM-HPDTDESSLRSYFEKYGDIRECIVVKDPA-TKRSRCFSFITFGNAENVDE 1139
Query: 299 AAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSF 358
+ R + G+ TVE + D E + K +FV L + TEE+L K F
Sbjct: 1138 VQKDRPHTIDGR--------TVETKRAMPREDTENHHQTKKMFVGGLKDDTTEEMLRKEF 983
Query: 359 S 359
+
Sbjct: 982 T 980
>08670
Length = 1307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 21/134 (15%)
Frame = +2
Query: 293 YEDHKTAAQARRRLMSGKV--KVWGNVGTVEWAD-------PIEDP----------DPEV 333
Y+ H T A L+SG V + G V + D P+ P DP+
Sbjct: 761 YKKHSTVPAALEALLSGTVDESLAGEVYLSDEEDYVAPKSIPVPQPLASMPADSKMDPKN 940
Query: 334 MAKVKVLFVRNLANTVTEEILEKSFSQFGKLERVKKL--KDYAFIHFDERDGAVKAMEEM 391
+ L+V N+ VTE+ L + F++ G + V+ L K AFI++ ++ A +AM+ +
Sbjct: 941 PEGLTALWVGNVLPQVTEKRLTQMFAKHGPVASVRMLPEKYCAFINYKLKESAGRAMQYL 1120
Query: 392 NGKDLEGENIEIVF 405
++ EG+++ I F
Sbjct: 1121QNQECEGQHLLIRF 1162
>31310
Length = 469
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = -3
Query: 150 DSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVT 209
++V Q ++ I+VG I ++ ED + F GPI + L DP+T ++G++F+
Sbjct: 359 NTVQRQQALALMCRIYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIE 180
Query: 210 FCTKEAAQEAVKLYNNHEIRSGKHIGV 236
+ EAAQ A++ N I G++I V
Sbjct: 179 YDVPEAAQLALEQMNGVMI-GGRNIKV 102
>12350
Length = 975
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Frame = -2
Query: 147 PPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYA 206
P P V S + I +G +P ED+L F + G + +++ DP TG ++G+
Sbjct: 662 PGPKVVKSSSRQKCSDLIVLG-LPWKSTEDDLRSYFSQFGDLLMVQVKKDPKTGQSKGFG 486
Query: 207 FVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCI--------SVANNRLFVGSIPKSKTKEQ 258
F+ F E+ +K + G+ V I + N ++FVG T +
Sbjct: 485 FIRFAEYESQ---LKCMAQRHMIDGRWCDVRIPNSKEGAQQLMNRKIFVGRCTDDMTADD 315
Query: 259 ILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTA 299
+ + FSK E + DV + + R F F+ + D + A
Sbjct: 314 LRQFFSKFGE-VVDVFI------PRPFRAFAFVSFADPEVA 213
>02415
Length = 2763
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%)
Frame = -1
Query: 154 SGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTK 213
+GQ+ + T+IFVG +P + L F+K G I + ++ D TG +RGY FVT +
Sbjct: 1950 TGQKDTTYTKIFVGGLPYHTTDHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFVTMADR 1771
Query: 214 EAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPK 252
A A K + + I G+ V N ++G+ P+
Sbjct: 1770 TGADRACK--DPNPIIDGRKANV------NLAYIGAKPR 1678
>31618
Length = 716
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = +1
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
++FVG + + E EL F K G I + + DP TG +RG+AF+ F EA + V
Sbjct: 295 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQ-VSA 471
Query: 223 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTE-GLTDVILYHQPDD 281
H I S K RL + +++ SK T L +++ P D
Sbjct: 472 AEEHIINSKK----VDPKKKPRLAMARFLSVA*PQRLAMRKSKPTSVNLDNIVEVEMPFD 639
Query: 282 KKKN--RGFCFLEYEDHKTAA 300
K+K+ +GF F+ ++ +
Sbjct: 640 KQKSHRKGFXFITFDSEQVVT 702
>30672
Length = 877
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 45/212 (21%)
Frame = +3
Query: 245 LFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARR 304
LFV ++P + E++LE F +V T ++ + + K RGF ++++ + A +A+
Sbjct: 18 LFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGK--EPGKCRGFGYVQFSMLEDAIKAKD 191
Query: 305 RL--MSGKV---------KVWGNV--GTVEWADPI----------------EDPDPEV-- 333
+ SG+ K W G E +D + +P PE
Sbjct: 192 TVTHCSGRKISLSFADTKKSWKTKQKGGTETSDALGLGKKLPSQTAVTDGEPNPKPEKKK 371
Query: 334 -------MAKVKVLFVRNLANTVTEEILEKSFSQFGKLERVK-------KLKDYAFIHFD 379
+ K L +RNLA E + F +FG + V + + +AF+ F
Sbjct: 372 TKQPKQELGKRCRLIIRNLAFKCKEADIRSHFGKFGTISEVTIPLKQGDRSRGFAFVQFT 551
Query: 380 ERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQ 411
E A KA+ +MNG + + + +A D+
Sbjct: 552 EVKAAQKAISDMNGTAIMDRPVAVDWAVAKDR 647
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +3
Query: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 389
K LFVRNL + E L ++F Q G L+ K + + ++ F + A+KA +
Sbjct: 12 KTLFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLEDAIKAKD 191
Query: 390 EMNGKDLEGENIEIVFA 406
+ G I + FA
Sbjct: 192 TVT--HCSGRKISLSFA 236
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223
+FV +P + ++L+ FE+ GP+ ++ G RG+ +V F E +A+K
Sbjct: 18 LFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLE---DAIKAK 188
Query: 224 NNHEIRSGKHIGVCIS 239
+ SG+ I + +
Sbjct: 189 DTVTHCSGRKISLSFA 236
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 202 NRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRL 245
+RG+AFV F +AAQ+A+ N I + + V +VA +R
Sbjct: 522 SRGFAFVQFTEVKAAQKAISDMNGTAIMD-RPVAVDWAVAKDRF 650
>00556
Length = 2189
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
+IF+G +P L ED++ L GP+ L+ D TGL++G+AF + +A
Sbjct: 762 KIFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTDQACAG 941
Query: 223 YNNHEIRSGKHI 234
N ++ K I
Sbjct: 942 LNGMQLGDKKLI 977
>08958
Length = 680
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Frame = +2
Query: 227 EIRSGKHIGVCISVANNRLFVGSIPKSKTKE---QILEEFSKVTEGLTDVILYHQPDDKK 283
E R K G C RLFVG++ +++ ++ F +V+E +
Sbjct: 38 EYRRKKFTGRC------RLFVGNLTPDVSEDDFKKLFSPFGEVSEAYVN----------- 166
Query: 284 KNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVR 343
RGF F+ D++ A+A + + G ++ G V +A L V+
Sbjct: 167 SGRGFGFIRL-DYRHNAEAAKAALDG-LQRKGRSLRVRYA-----------THGAALKVK 307
Query: 344 NLANTVTEEILEKSFSQFGKLERVKKLKD-------YAFIHFDERDGAVKAMEEMN-GKD 395
NL V+ E+LE++F+QFG LER + D + F + GA +A+ +N G
Sbjct: 308 NLHPYVSNELLEQAFTQFGDLERAIVIVDERGRSTGEGVVEFVRKPGAQQALRRINEGVF 487
Query: 396 LEGENIEIVFAKPPDQKRKE 415
L G + + + +P + K +E
Sbjct: 488 LFGADPKPIEVEPLEHKDEE 547
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%)
Frame = +2
Query: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223
+FVG + D+ ED+ LF G + + RG+ F+ + A EA K
Sbjct: 74 LFVGNLTPDVSEDDFKKLFSPFGEV------SEAYVNSGRGFGFIRLDYRHNA-EAAKAA 232
Query: 224 NNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKK 283
+ R G+ + V + L V ++ + E + + F++ + +++ D++
Sbjct: 233 LDGLQRKGRSLRVRYATHGAALKVKNLHPYVSNELLEQAFTQFGDLERAIVIV---DERG 403
Query: 284 KNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPE 332
++ G +E+ A QA RR+ G + +E +P+E D E
Sbjct: 404 RSTGEGVVEFVRKPGAQQALRRINEGVFLFGADPKPIE-VEPLEHKDEE 547
>16427
Length = 1313
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Frame = +1
Query: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391
LFV LA + E++LE+ FS+FG++ ++D + F+ ++ A +A++ M
Sbjct: 142 LFVGGLAEEIDEKVLEREFSKFGRITESMVIRDKVRQVSRGFGFVTYENPMDAEEAVKHM 321
Query: 392 NGKDLEGENIEI 403
+GK++ G+ + +
Sbjct: 322 DGKEILGKKLHV 357
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +1
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
++FVG + ++ E L F K G I + ++ D + ++RG+ FVT+ A+EAVK
Sbjct: 139 KLFVGGLAEEIDEKVLEREFSKFGRITESMVIRDKVRQVSRGFGFVTYENPMDAEEAVKH 318
Query: 223 YNNHEI 228
+ EI
Sbjct: 319 MDGKEI 336
>19868
Length = 434
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Frame = +2
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
++FVG + + L F K G I ++ +M DP T +RG+ F+TF A+ + V
Sbjct: 2 KMFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFG-DPASVDKVLA 178
Query: 223 YNNHEIRSGKHIGVCISVA----------NNRLFVGSIPKSKTKEQI---LEEFSKVTEG 269
HE+ GK I ++ ++FVG + T E + E+F + +
Sbjct: 179 QATHEL-DGKKIDPKVAFPRRAHPRMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDA 355
Query: 270 LTDVILYHQPDDKKKNRGFCFLEYEDH 296
+ +++ + ++ + GF + H
Sbjct: 356 M---LMFDKQTNRHRGFGFVTISKRRH 427
>01278
Length = 1082
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +2
Query: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAV 220
I V + D E +L LF GPI + L D +TG ++G+AF+ F +E A A+
Sbjct: 641 IRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDASRAI 811
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +2
Query: 339 VLFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEE 390
+ V NL+ E L++ F FG + R+ KD +AFI+F R+ A +A+
Sbjct: 638 TIRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDASRAIAG 817
Query: 391 MNGKDLEGENIEIVFAKPPDQK 412
++G + + + +AKP Q+
Sbjct: 818 VSGFGYDHLILNVEWAKPSGQQ 883
>00817
Length = 2606
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -2
Query: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
+F+G + D E L FEK G I + ++ DP T +R ++F+TF E E K
Sbjct: 2545 VFIGGMHPDTDESSLRSYFEKYGDIRECIVVKDPATKRSRCFSFITFGNAENVDEVQK 2372
>23250
Length = 1617
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -1
Query: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217
+++G IP +E ++ F + G + LRL TG ++GYAF+ F T+ Q
Sbjct: 1329 VYLGHIPAGFYEPQMKRFFSQFGRVTRLRLSRSTKTGGSKGYAFLEF*TRGCGQ 1168
>11019
Length = 552
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = -1
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
+IFVG + +++ F+ G I + LM D +T +RG+AFVTF + + ++
Sbjct: 231 KIFVGGLSSSTTVEDIKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTFDNESTVDKVCEI 52
Query: 223 YNNHEIRS 230
+ HEI S
Sbjct: 51 H-FHEINS 31
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 30/181 (16%)
Frame = -1
Query: 247 VGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKT-------- 298
+G + T E + F K E + + ++ P K+ +RGF F+ Y+D
Sbjct: 552 IGGLSWQTTTETLRSYFEKFGE-IKESMVMKDPTSKR-SRGFGFVTYKDPSNVDNVLANG 379
Query: 299 --AAQARRRLMSGKVKVWGNVGTVEWADPIEDP--------DPEVMAKVKVLFVRNLANT 348
++ S + N + + P DP +P ++ K K +FV L+++
Sbjct: 378 PHCIDSKTLNFSNMTTFYSNQDLLPYP-PQVDPKVAFPRKSNPRMVTKTKKIFVGGLSSS 202
Query: 349 VTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAME----EMNGKDL 396
T E ++ F +G +E + D +AF+ FD K E E+N K +
Sbjct: 201 TTVEDIKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTFDNESTVDKVCEIHFHEINSKMV 22
Query: 397 E 397
E
Sbjct: 21 E 19
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 166 VGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTF 210
+G + + L FEK G I + +M DP + +RG+ FVT+
Sbjct: 552 IGGLSWQTTTETLRSYFEKFGEIKESMVMKDPTSKRSRGFGFVTY 418
>00029
Length = 2204
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = -3
Query: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGE 399
+F+ NL + E L F ++G + LK++ F+H ++ A A+ +NG ++ G+
Sbjct: 2130 IFIGNLGDDTDPEELRALFEKYGSVAECDVLKNFGFVHMVKKGEADDAISNLNGYNIGGQ 1951
Query: 400 NIEI 403
+ +
Sbjct: 1950 RMRV 1939
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = -3
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
+IF+G + D +EL LFEK G + + ++ + + FV K A +A+
Sbjct: 2133 KIFIGNLGDDTDPEELRALFEKYGSVAECDVL--------KNFGFVHMVKKGEADDAISN 1978
Query: 223 YNNHEIRSGKHIGVCISVA 241
N + I G+ + V +S
Sbjct: 1977 LNGYNI-GGQRMRVELSTG 1924
>04988
Length = 705
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = -3
Query: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGE 399
+++ L E+ +E+ F +G++ + Y F+ F++ A A+ E+NGKDL GE
Sbjct: 646 VYIGRLPYQAREKDIERFFRGYGRVNDIMLKNGYGFVEFEDFRDADDAVYELNGKDLCGE 467
Query: 400 NIEIVFAK 407
+ I A+
Sbjct: 466 RVIIEHAR 443
>00302
Length = 927
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = -1
Query: 175 EDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHI 234
E L +F + G I +++++ D TG +RG+AFV F + E A EA N EI G+ I
Sbjct: 426 ERGLREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAKDRCNGIEI-DGRKI 250
Query: 235 GVCISVA 241
V S+
Sbjct: 249 RVDFSIT 229
>23720
Length = 739
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = -1
Query: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGE 399
+++ L E+ +E+ F +G++ + Y F+ F++ A A+ E+NGKDL GE
Sbjct: 679 VYIGRLPYQAREKDIERFFRGYGRVNDIMLKNGYGFVEFEDFRDADDAVYELNGKDLCGE 500
Query: 400 NIEIVFAK 407
+ I A+
Sbjct: 499 RVIIEHAR 476
>33516
Length = 449
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTF 210
+IFVG + D +D L F + G I D +MM+ TG +RG+ FV+F
Sbjct: 157 KIFVGGLSWDTDQDSLQGYFSQFGEITDCIVMMNQQTGKSRGFGFVSF 300
>02140
Length = 1796
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 329 PDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDE 380
PD + VLFV L T+E LE FS+FG + + ++D YAF+ F++
Sbjct: 774 PDADTKPPDNVLFVCKLNPVTTDEDLEMIFSRFGPITSCEVIRDHKTKESLQYAFVEFEK 953
Query: 381 RDGAVKAMEEMNGKDLEGENIEIVFAK 407
+ A +M+ ++ I + F++
Sbjct: 954 PEHCENAYFKMDNVLIDDRRIHVDFSQ 1034
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Frame = +3
Query: 121 EAKIKA-LLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELV 179
EA+ A LLE G D T PPD+V +FV K+ +++L
Sbjct: 729 EARANAQLLEMVGDLPDADTK-------PPDNV-----------LFVCKLNPVTTDEDLE 854
Query: 180 PLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGK-HIGVCI 238
+F + GPI ++ D T + YAFV F E + A +N I + H+
Sbjct: 855 MIFSRFGPITSCEVIRDHKTKESLQYAFVEFEKPEHCENAYFKMDNVLIDDRRIHVDFSQ 1034
Query: 239 SVANNRLFVG 248
SV+ R G
Sbjct: 1035SVSKIRPMDG 1064
>35180
Length = 2181
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Frame = -2
Query: 121 EAKIKALLERTGYTL----DVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFED 176
EA KAL + T + D+T +R P PD+ + ++V P D+ D
Sbjct: 395 EAICKALQKSTAGLMEVNEDMTKIRRCPSKPLPDNTKERKDDINSRSVYVKGFPEDITLD 216
Query: 177 ELVPLFEKAGPIWDLRLMMDPLTGLN-RGYAFVTFCTKEAAQEAVKL-----YNNHEI 228
L+ FE+ G I D LM N +G FVTF KE +E V L YN+ E+
Sbjct: 215 TLMEFFEQHGKI-DTILMRRNRPDKNFKGSVFVTFSNKE--EEDVFLGKDVKYNDTEL 51
>25632
Length = 864
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = -2
Query: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGE 399
+ +RNL V LEK +G +E LK+Y F+H + A A+ +NG +++G+
Sbjct: 743 VMIRNLMTFVC--CLEK----YGTVEECDVLKNYGFVHMPTKSEASAAITNLNGYNIKGQ 582
Query: 400 NIEI 403
+ +
Sbjct: 581 RMRV 570
>01937
Length = 1320
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -1
Query: 149 PDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFV 208
P + S + ++IFVG + ++ F+ G I + LM D +T +RG+AFV
Sbjct: 1254 PHCIDSKTMVTKTSKIFVGGLSSSTTVEDXKNYFKAYGTIEEATLMFDKVTSRHRGFAFV 1075
Query: 209 TF 210
TF
Sbjct: 1074 TF 1069
>32386
Length = 674
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEA 219
++F+G + + ED L FE G I D +M D + +RG+ F+T+ E+ +A
Sbjct: 304 KLFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQA 474
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +1
Query: 244 RLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQAR 303
+LF+G + ++ + F E + D I+ + K++RGF F+ Y+D ++ QA+
Sbjct: 304 KLFIGGLSYETDEDSLRSHFETWGE-IVDCIVMRDSN-SKRSRGFGFITYKDAESIDQAQ 477
Query: 304 RRLMSGKVKVWGNVGTVEWADPIEDPD-PEVMAKVKVLFVRNLA 346
+ K+ G + A P E+ EV VK +FV +L+
Sbjct: 478 ---ANRPHKIDGREVDTKRAMPREESGRSEVQQSVKKMFVGSLS 600
>17175
Length = 512
Score = 36.2 bits (82), Expect = 0.036, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -3
Query: 148 PPDSVYSGQQPSVGT-EIFVGKIPRDLFEDELVPLFEKAGPIWDL 191
P V S +P + ++FVG+IPR++ E+EL +FE GP+ L
Sbjct: 135 PSTQVTSQGEPDADSIKMFVGQIPRNMDENELRKMFEDYGPVHSL 1
>12506
Length = 1056
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = -3
Query: 346 ANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEMNGKDLE 397
A V +++L +F FG + ++ K + +AFI F+ + A A++ MN +L
Sbjct: 1039 AGEVDDKVLHAAFLPFGDIVDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNMNESELF 860
Query: 398 GENIEIVFAKP 408
G I + AKP
Sbjct: 859 GRTIRVNLAKP 827
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = -3
Query: 161 GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAV 220
G+ G++ + +P G I D+++ +D T +RG+AF+ F E A A+
Sbjct: 1054 GSLFTAGEVDDKVLHAAFLPF----GDIVDIQIPLDYETEKHRGFAFIEFELAEDAAAAI 887
Query: 221 KLYNNHEIRSGKHIGVCIS 239
N E+ G+ I V ++
Sbjct: 886 DNMNESEL-FGRTIRVNLA 833
>29364
Length = 1126
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 349 VTEEILEKSFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEI 403
V E LE+ F +G+ + Y F+ F++ A A+ E+NGK+L GE + +
Sbjct: 1 VRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 165
>24983
Length = 433
Score = 35.4 bits (80), Expect = 0.073, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = -2
Query: 165 FVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYN 224
+G +P + L F+K G I + ++ D TG +RGY FVT + A A K +
Sbjct: 306 LLGGLPYHTTDHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFVTMADRTGADRACK--D 133
Query: 225 NHEIRSGKHIGVCISVANNRLFVGSIPK 252
+ I G+ V N ++G+ P+
Sbjct: 132 PNPIIDGRKANV------NLAYIGAKPR 67
>26197
Length = 1365
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Frame = -2
Query: 147 PPPDSVYSGQQPSVGTE-------IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLT 199
++V S Q G E IFVG + + L FEK G + L D +
Sbjct: 1364 SDSEAVVSTQSGHYGREENEDDRKIFVGGLSWETSSKHLREYFEKFGEVTSCTLKTDLDS 1185
Query: 200 GLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHI 234
G +RG+ FV F KEA + N G+ I
Sbjct: 1184 GKSRGFGFVVF--KEAVTVDAVVKNKEHKLQGRKI 1086
>30934
Length = 809
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 183 EKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEA 219
+K GP+ DL L +DP+T +G+A VTF E A +A
Sbjct: 19 DKGGPVTDLDLPVDPITKKIKGFAHVTFMFPEHAVKA 129
>03903
Length = 983
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = -1
Query: 164 IFVGKIPRDLFEDELVPLF--------EKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEA 215
+++ + + + E++L +F E+ I+D+RLM + G +G AFVT T+E
Sbjct: 452 LYIKNLSKQVTEEDLHWVFGRYVNWDKEEEKSIFDIRLMKE---GRMKGQAFVTLGTEEQ 282
Query: 216 AQEAVKLYNNHEIRSGKHIGV 236
A++AVK N + GK I V
Sbjct: 281 ARKAVKDTNAF-VFKGKPIAV 222
>01065
Length = 1033
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 346 ANTVTEEILEKSFSQFGKLERV---KKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIE 402
++T T EI E+ F +FG + + + AF+ + + A KA+ M+G+ + G +
Sbjct: 41 SSTSTREIREE-FKRFGDIIDLWMPRTQPTIAFVVYRYEEDAEKAIRRMDGESMHGRRVR 217
Query: 403 IVFAKPPDQ 411
+ A+P Q
Sbjct: 218 VSLARPRSQ 244
>25950
Length = 417
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = -2
Query: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223
++VG + +EL F G I + ++ + G +G+A++ F +KE + A+ +
Sbjct: 275 VYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAM- 99
Query: 224 NNHEIRSGKHIGVCISVAN 242
N + G+ I V N
Sbjct: 98 -NETLFRGRQIKVMTKRTN 45
>00738
Length = 1559
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = -2
Query: 346 ANTVTEEILEKSFSQFGKLERV---KKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIE 402
++T T EI E+ F +FG + + + AF+ + + A KA+ M+G+ + G +
Sbjct: 1240 SSTSTREIREE-FKRFGDIIDLWMPRTQPTIAFVVYRYEEDAEKAIRRMDGESMHGRRVR 1064
Query: 403 IVFAKPPDQ 411
+ A+P Q
Sbjct: 1063 VSLARPRSQ 1037
>28605
Length = 697
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = -3
Query: 340 LFVRNLANTVTEEI-LEKSFSQFGK-LERVKKLKDYAFIHFDERDGAVKAMEEMNG 393
+FV NL++ T E L++ FS++G L+ + Y F+ F + +A+E MNG
Sbjct: 563 VFVANLSSDETSEAELQELFSKYGNVLDTLVHHNRYGFVQFSTEEEGRRAVEAMNG 396
>11126
Length = 1061
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = -3
Query: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223
++VG + +EL F G + + ++ D +G +G+A+V F K++ A K
Sbjct: 624 VYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKYSGHPKGFAYVEFADKDSVVTA-KCT 448
Query: 224 NNHEIRSGKHIGV 236
+ G+ I V
Sbjct: 447 GMDSLFRGRQIKV 409
>05273
Length = 1009
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 182 FEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYN 224
F+K G I + ++ D TG +RGY FVT + A E + N
Sbjct: 139 FDKFGDIDEAVVITDRQTGKSRGYGFVTMADRRARTEPARTPN 11
>02809
Length = 1475
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -1
Query: 159 SVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQE 218
S+ +++VG++ + EL F K GP+ ++ + P G+AFV F A++
Sbjct: 1343 SLDCKVYVGELGHGCAKQELEDKFAKYGPLKNVWVARRPA-----GFAFVEFEDNRDAED 1179
Query: 219 AVK-LYNNHEIRSGKHIG 235
AV+ L + + RS G
Sbjct: 1178 AVQALDGSADXRSAGACG 1125
>20169
Length = 1364
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -1
Query: 159 SVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQE 218
S+ +++VG++ + EL F K GP+ ++ + P G+AFV F A++
Sbjct: 1079 SLDCKVYVGELGHGCAKQELEDKFAKYGPLKNVWVARRPA-----GFAFVEFEDNRDAED 915
Query: 219 AVKLYNNHEI 228
AV+ + I
Sbjct: 914 AVQALDGARI 885
>00781
Length = 3170
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -1
Query: 181 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYN 224
+F K G + + L T +GYAFV F + E A +AV++ N
Sbjct: 2663 MFSKCGTVTYVSLPCFKTTREIKGYAFVEFQSPEEAVKAVQMLN 2532
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = -1
Query: 337 VKVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAM 388
+ ++V + E + + FS+ G + V +++K YAF+ F + AVKA+
Sbjct: 2723 ARTVYVEGFHKFTSREWISRMFSKCGTVTYVSLPCFKTTREIKGYAFVEFQSPEEAVKAV 2544
Query: 389 EEMN 392
+ +N
Sbjct: 2543 QMLN 2532
>13457
Length = 4857
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Frame = -1
Query: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD-------YAFIHFDERDGAVKAMEEMN 392
LFV L TEE + + F +G +E L+D AF+ + A A+ ++
Sbjct: 3402 LFVGMLNKQQTEEDVRQLFHPYGAIEECTILRDQNGNSKGCAFVKYSTHSEAQAAINALH 3223
Query: 393 G-KDLEGENIEIV--FAKPPDQKRKERKAQRQA 422
G + + G + +V FA +++R+ R+ Q+ A
Sbjct: 3222 GSQTMPGASSSLVVKFAD-TEKERQLRRMQQMA 3127
>19556
Length = 917
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Frame = -1
Query: 341 FVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFD-ERDGAVKAMEEM 391
F+ L VTEE L + FS+FG++ V + +A+++ E +G K
Sbjct: 821 FIGGLVKGVTEEELMEKFSRFGQVSNVDIKTRTNGIDSRTFAYVNLTAEENGFKKCFTAY 642
Query: 392 NGKDLEGENIEIVFAK 407
N +G +++ +AK
Sbjct: 641 NNTKWKGGQLKLQYAK 594
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6678483|ref|NP_033483.1| ubiquitin-activating enzyme
E1 isoform 1 [Mus musculus]
(1058 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
34235 228 e-100
19711 173 9e-88
21876 288 8e-78
25566 250 2e-66
00369 120 3e-27
21008 116 4e-26
06604 115 1e-25
20367 76 6e-14
14935 36 0.066
>34235
Length = 1026
Score = 228 bits (580), Expect(3) = e-100, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 134/194 (69%), Gaps = 1/194 (0%)
Frame = -1
Query: 741 FWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGSQDRAAVASLLQSVQVPEFT 800
FWSGPKRCPH L FD +N LHLDY+ AAAN+ GL +DRAA+ ++ V VPEF
Sbjct: 876 FWSGPKRCPHALEFDADNELHLDYIEAAANMKGFMCGLPPVRDRAAIKDMVSKVMVPEFV 697
Query: 801 PKSGVKIHVSDQELQSANA-SVDDSRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHM 859
P+SG+KI V+D E Q+ N + D +E+LK+ LPSPD+L G ++ +DFEKDDD+NFHM
Sbjct: 696 PRSGIKIAVTDAEAQAGNNDNFDKDTVEKLKSALPSPDELKGRQLNAVDFEKDDDTNFHM 517
Query: 860 DFIVAASNLRAENYDISPADRHKSKLXXXXXXXXXXXXXXXVVGLVCLELYKVVQGHQQL 919
DFI AASNLRAENY I PADRHKSKL VVGLV LEL K+ QGH +
Sbjct: 516 DFITAASNLRAENYSIPPADRHKSKLIAGRIIPAIATTTAMVVGLVGLELIKLAQGHTNV 337
Query: 920 DSYKNGFLNLALPF 933
+ +KNGF NLALP
Sbjct: 336 ERFKNGFANLALPL 295
Score = 124 bits (312), Expect(3) = e-100, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 81/107 (75%)
Frame = -2
Query: 931 LPFFGFSEPLAAPRHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITML 990
L F FSEP+ AP+ +YY +E+TLWDRF VQG E+TL+QFLDYF+ EH LEITML
Sbjct: 305 LSLFAFSEPILAPKSKYYEKEFTLWDRFTVQG------EITLQQFLDYFQKEHGLEITML 144
Query: 991 SQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLE 1037
SQGV +L+S FM AK +ER + ++E+V +VSK+K+ HVRALVLE
Sbjct: 143 SQGVCLLFSNFMQPAKQEERKNLLISELVKKVSKKKIPPHVRALVLE 3
Score = 55.1 bits (131), Expect(3) = e-100, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -3
Query: 692 QRSLVLQRPQTWGDCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPK 746
+R++ + ++ CV WA + + T Y N I+QLL NFP DQ+TSSGAPF G +
Sbjct: 1024 KRTVNTEFFTSFDKCVEWARNLFQTNYSNQIKQLLFNFPSDQMTSSGAPFLVGSQ 860
>19711
Length = 1114
Score = 173 bits (438), Expect(2) = 9e-88, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 1/190 (0%)
Frame = +2
Query: 378 LDEDLIRKLAYVAAGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDALECLPEDKE 437
++E ++R L++ A G LAP+ A +GG+ AQE +KA +GKF+P+ QWLY DA+E +PE
Sbjct: 545 VEEKIVRCLSHTARGSLAPLCAAMGGIVAQEGLKALTGKFLPLSQWLYLDAMETIPE-LS 721
Query: 438 ALTEEKCLPRQNRYDGQVAVFGSDFQEKLSKQKYFLVGAGAIGCELLKNFAMIGLGCXXX 497
+ E R +R D G D +KL+ + F+VG GAIGCE+LKN+A++GLG
Sbjct: 722 VTSPEAFQLRNDRLDPLRICVGEDVCQKLADTRLFMVGCGAIGCEMLKNYALLGLGAGQK 901
Query: 498 XXXXXTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPYIQVTSHQNRVGPDTE 557
TD D IEKSNLNRQFLFR + K KS TAA +V +NP + + + QN+V P TE
Sbjct: 902 GQITITDNDLIEKSNLNRQFLFRSHHIQKPKSTTAAQSVLDINPALHIQAQQNKVCPQTE 1081
Query: 558 RI-YDDDFFQ 566
Y D FF+
Sbjct: 1082STHYPDAFFE 1111
Score = 170 bits (431), Expect(2) = 9e-88, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 108/171 (63%), Gaps = 2/171 (1%)
Frame = +3
Query: 200 CDFGEEMVLTDSNGEQPLSAMVSMVTKDNPGVVTCLDEARHGFETGDFVSFSEVQGMIQL 259
CDFG+ + D GE+ ++ +TK NPGVVTCLD HG ETGD V+F EV+GM QL
Sbjct: 3 CDFGDTFEVMDPTGEEAKEVFIANITKANPGVVTCLDNLLHGLETGDLVTFKEVKGMEQL 182
Query: 260 NGCQPMEIKVLGPYTFSICDTSN--FSDYIRGGIVSQVKVPKKISFKSLPASLVEPDFVM 317
N Q IKVL P TFSIC+TS F Y GGI+SQVKVPK + FKSL LV P +M
Sbjct: 183 NS-QQCAIKVLSPTTFSICNTSGSEFGAYESGGIISQVKVPKSVHFKSLEEQLVSPSLLM 359
Query: 318 TDFAKYSRPAQLHIGFQALHQFCALHNQPPRPRNEEDATELVGLAQAVNAR 368
D K++ P +H+ FQALHQF A P+P + A +V LA+A +A+
Sbjct: 360 PDLCKFTAPGNIHVAFQALHQFWAETGSLPQPWCSDSADRMVLLAKACSAK 512
>21876
Length = 894
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 152/306 (49%), Positives = 206/306 (67%), Gaps = 10/306 (3%)
Frame = -1
Query: 44 NGSEADIDESLYSRQLYVLGHEAMKM---LQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100
NG+ DIDE L GHEAM+ LQ S + G GLG+EIAKN++LGGVK+V+
Sbjct: 894 NGAADDIDEGLVXSPAVCAGHEAMRKMAKLQCSDLWAMG--GLGIEIAKNVVLGGVKSVS 721
Query: 101 LHDQGTTQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVTAYTGPLVEDFLSSFQ 160
+HD G + DLSSQF+LR+ED+GKNRAEVSQPRLAELNSYVP+++ TG DF
Sbjct: 720 IHDPGKVVFGDLSSQFFLRDEDVGKNRAEVSQPRLAELNSYVPISSSTG----DFG*GLL 553
Query: 161 VVVLTNSPLEAQLRVGEFCHSRGIKLVVADTRGLFG-------QLFCDFGEEMVLTDSNG 213
V V S + +R + C G L ++ + G + DFG V+TD +G
Sbjct: 552 VQVSGGSTDQLFVR*TDPC---GRVLSLSQHQVHCGRNAWTVWENLLDFGSNFVITDGDG 382
Query: 214 EQPLSAMVSMVTKDNPGVVTCLDEARHGFETGDFVSFSEVQGMIQLNGCQPMEIKVLGPY 273
EQP+S M++ + K + VV +DE +HG E GD+V+F EVQGM +LNGC+P++IKVLGPY
Sbjct: 381 EQPISCMIADIEKGDNSVVATVDETKHGLEDGDYVTFKEVQGMTELNGCKPVKIKVLGPY 202
Query: 274 TFSICDTSNFSDYIRGGIVSQVKVPKKISFKSLPASLVEPDFVMTDFAKYSRPAQLHIGF 333
TFSI DT+ ++DYIRGG +QVK+PK I+FKS+ A++ P+ + +DFAK+ RP QLHI F
Sbjct: 201 TFSIGDTTKYADYIRGGTATQVKMPKTINFKSIKAAMDAPEILPSDFAKFDRPPQLHIAF 22
Query: 334 QALHQF 339
+AL ++
Sbjct: 21 KALSEY 4
>25566
Length = 1639
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 246/467 (52%), Gaps = 11/467 (2%)
Frame = +2
Query: 600 TLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQP 659
T+GTKG+VQV+IP LTESY+S QDP ++ P CT+K+FP IEH +QWARD+FE L+
Sbjct: 2 TMGTKGHVQVIIPHLTESYTSQQDPADEDYPYCTVKSFPATIEHCIQWARDKFEELYVNQ 181
Query: 660 AENVNQYLTDSKFVERTLRLAGTQPLEVLEAVQR--SLVLQRPQTWGDCVTWACHHWHTQ 717
N++L + + T + + +V++ R + RP +W DCV A +
Sbjct: 182 PNLFNKFLASN--ADMTAVVHKLKSGDVVDGGLRVSKMAATRPHSWEDCVRLARIRFEKY 355
Query: 718 YCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYG 777
+ + RQLLH FP D + FW PKR P PL F+ ++ LH+ +V + A L Y
Sbjct: 356 FNHKARQLLHAFPLDIKLPDNSLFWQSPKRPPTPLQFNADDPLHMTFVTSTARLLCDIYA 535
Query: 778 LTGSQDRA--AVASLLQSVQVPEFTPKSGVKIHVSDQ------ELQSANASVDDSRLEEL 829
++ S + ++ ++L +V VP F P S KI + E QS+ V +
Sbjct: 536 ISYSTQVSTDSIKTILHAVTVPAFVP-SDKKIETDETKSQQEAEPQSSGDEVTAAGERLA 712
Query: 830 KATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKSKLXXXX 889
+ + S + M ++FEKDDDSN H++FI A SN+RA+ Y I DR K K
Sbjct: 713 QVVMSSQAQSALQPMAALEFEKDDDSNDHINFIAACSNMRAQMYSIENVDRLKIKRIAGR 892
Query: 890 XXXXXXXXXXXVVGLVCLELYKVVQGHQQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYN 949
V GLV +EL KV+Q + LD++KN FLNLALP SEP A R
Sbjct: 893 IVPAIATTTAAVSGLVTIELIKVLQ-QRPLDAFKNAFLNLALPMLLLSEPGACARKVLKE 1069
Query: 950 Q-EWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMPAAKLK 1008
++WD++ ++G Q + TL+QFLD K E T + GV ++Y MP K
Sbjct: 1070 GLSVSVWDKWTIRGKQ----DFTLQQFLDSCKDSFGFEATAVVNGVKIIYMPIMPPH--K 1231
Query: 1009 ERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVEVPYVRY 1055
+RL Q M +++ K + + L +C D+ GE++E P VRY
Sbjct: 1232 KRLPQTMMKLI------KPEPGITYVDLVVCFEDDKGEEIEGPPVRY 1354
>00369
Length = 1082
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 14/207 (6%)
Frame = +3
Query: 470 KYFLVGAGAIGCELLKNFAMIGLGCXXXXXXXXTDMDTIEKSNLNRQFLFRPWDVTKLKS 529
K ++GAG +GCELLK+ A++G DMDTI+ SNLNRQFLFRP DV K+
Sbjct: 222 KLLVIGAGGLGCELLKDLALMGF-----FDIHVIDMDTIDVSNLNRQFLFRPKDVGSPKA 386
Query: 530 DTAAAAVRQMNPYIQVTSHQNRVGPDTERIYDDDFFQNLDGVANALDNIDARMYMDRRCV 589
+ AAA + P +VT H ++ + YD+ F++ + LD+I AR +++ +
Sbjct: 387 EVAAAFINSRVPGCKVTPHFAKI-----QDYDESFYRGFHVIVCGLDSIIARRWINSMLI 551
Query: 590 YYRK------------PLLESGTLGTKGNVQVVIPFLTESYSSSQD--PPEKSIPICTLK 635
PL++ GT G KGN +VV+P +T + D PP+ + P+CT+
Sbjct: 552 SLLNYEDGELDQSSIIPLVDGGTEGFKGNARVVLPGITACIECTLDLYPPQVNFPLCTIA 731
Query: 636 NFPNAIEHTLQWARDEFEGLFKQPAEN 662
+ P EH +++ R + P EN
Sbjct: 732 HTPRLPEHCIEYVR-----ILLWPKEN 797
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Frame = +3
Query: 69 MLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQGTTQWADLSSQFYLREEDIGKNRA 128
M +T +LV G GLG E+ K++ L G + + D T ++L+ QF R +D+G +A
Sbjct: 207 MKETCKLLVIGAGGLGCELLKDLALMGFFDIHVIDMDTIDVSNLNRQFLFRPKDVGSPKA 386
Query: 129 EVSQPRLAELNSYVPVTAYTGPLV------EDFLSSFQVVVL----------TNSPLEAQ 172
EV+ A +NS VP T E F F V+V NS L +
Sbjct: 387 EVAA---AFINSRVPGCKVTPHFAKIQDYDESFYRGFHVIVCGLDSIIARRWINSMLISL 557
Query: 173 LRV--GEFCHSRGIKLVVADTRGLFGQ 197
L GE S I LV T G G
Sbjct: 558 LNYEDGELDQSSIIPLVDGGTEGFKGN 638
>21008
Length = 408
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Frame = +3
Query: 19 PGSNCSPAQSALSEVSSVPTNGMAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVS 78
PG NC +++ T MA S+ +ID+SLYSRQ YVLG AMK + SSVL+
Sbjct: 54 PGFNCF-------KINLCNTETMA---SDMEIDDSLYSRQRYVLGDSAMKRMAQSSVLIH 203
Query: 79 GLRGLGVEIAKNIILGGVKAVTLHDQGTTQWADLSSQFYLREEDI--GKNRAEVSQPRLA 136
GL GLG+EIAKNI+L GVK++T+ D T+ +DL +QF++R+ D+ KNRAE +LA
Sbjct: 204 GLGGLGIEIAKNIVLAGVKSLTVQDSKTSCTSDLGTQFFVRQADVDAAKNRAEACAGKLA 383
Query: 137 ELNSYVPV 144
ELN YV +
Sbjct: 384 ELNPYVKI 407
>06604
Length = 1748
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Frame = -2
Query: 53 SLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQGTTQWADL 112
+LY RQ+ + G +A + L+ +SVL+ G+RGLG E+AKNI+L G+K++TL D D
Sbjct: 1735 ALYDRQIRLWGLDAQRRLRAASVLLVGVRGLGAEVAKNIVLAGIKSLTLLDPSLADEEDT 1556
Query: 113 SSQFYLREEDIGKNRAEVSQPRLAELNSYVPVTAYTGPL---VEDFLSSFQVVVLTNSPL 169
++QF + +IGKNRAE S R LN V VTA T + +DF++SF VV T +
Sbjct: 1555 AAQFLIPRSEIGKNRAEASLERTQLLNPMVTVTADTCSIDDKDDDFVTSFDVVCATGCGV 1376
Query: 170 EAQLRVGEFCHSRGIKLVVADTRGLFGQLFCDFG 203
R+ C G+ D G +G +F D G
Sbjct: 1375 STLRRLDRVCRDAGVMFYAGDVFGFYGYMFADLG 1274
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%)
Frame = -2
Query: 451 YDGQVAVFGSDFQEKLSKQKYFLVGAGAIGCELLKNFAMIGLGCXXXXXXXXTDMDTIEK 510
YD Q+ ++G D Q +L LVG +G E+ KN + G+ D ++
Sbjct: 1729 YDRQIRLWGLDAQRRLRAASVLLVGVRGLGAEVAKNIVLAGI-----KSLTLLDPSLADE 1565
Query: 511 SNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPYIQVTSHQNRVGPDTERIYDDDFFQNLDG 570
+ QFL ++ K +++ + + +NP + VT+ + DDDF + D
Sbjct: 1564 EDTAAQFLIPRSEIGKNRAEASLERTQLLNPMVTVTADTCSIDDK-----DDDFVTSFDV 1400
Query: 571 VANALDNIDARMYMDRRC 588
V + +DR C
Sbjct: 1399 VCATGCGVSTLRRLDRVC 1346
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = -3
Query: 334 QALHQFCALHNQPPRP---RNEEDATELVGLAQAVNARSPPSVKQNSLDEDLIRKLAYVA 390
+AL +F L Q RP E D +L L R + D +
Sbjct: 1044 KALLEF--LEQQKRRPATSSQESDCQQLSKL------RXQXLZSXGAGDNKMAEDFTQYC 889
Query: 391 AGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDALE 430
G L+P+ A +GG+ QE++KA S K +P + +++ +
Sbjct: 888 FGQLSPVCAVVGGILGQEIIKAVSQKDIPHNNFFFYNGTD 769
>20367
Length = 859
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Frame = -1
Query: 55 YSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQGTTQWADLSS 114
Y RQL + G L+T+ V + G EI KN+IL G+ + T+ D Q D+ +
Sbjct: 814 YDRQLRLWGDHGQSALETARVCLINATATGTEILKNVILPGIGSFTIVDGNKVQGEDVGN 635
Query: 115 QFYLREEDIGKNRAEVSQPRLAELNSYVPVTAYTGPLVE-----------DFLSSFQVVV 163
F+L+ + IGK+RA+V+ L ELN V TG VE DF ++F +V+
Sbjct: 634 NFFLQVDSIGKSRAQVATELLGELNDDV-----TGNFVEENVENLLESNADFFTTFSIVI 470
Query: 164 LTNSPLEAQLRVGEFCHSRGIKLVVADTRGLFGQL 198
TN + L++ I L+V G G L
Sbjct: 469 ATNLHEKTLLQLAGVLWENNIPLLVCRCYGFIGYL 365
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Frame = -1
Query: 445 LPRQNRYDGQVAVFGSDFQEKLSKQKYFLVGAGAIGCELLKNFAMIGLGCXXXXXXXXTD 504
L + N+YD Q+ ++G Q L + L+ A A G E+LKN + G+G D
Sbjct: 832 LDKNNKYDRQLRLWGDHGQSALETARVCLINATATGTEILKNVILPGIG-----SFTIVD 668
Query: 505 MDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMN 540
+ ++ ++ F + + K ++ A + ++N
Sbjct: 667 GNKVQGEDVGNNFFLQVDSIGKSRAQVATELLGELN 560
>14935
Length = 378
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -2
Query: 614 LTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLF--KQPAENVNQYLTDSK 671
LTE Y +KS P CT++N P+ H + WA+ F LF + P ++V+ D +
Sbjct: 377 LTECYECQPKAAQKSFPGCTIRNTPSEPIHCVVWAKHLFNQLFGEEDPDQDVSPDTEDPE 198
Query: 672 FV 673
Sbjct: 197 LT 192
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|149255275|ref|XP_893151.3| PREDICTED: similar to
electrogenic sodium bicarbonate cotransporter NBC4c isoform 3 [Mus
musculus]
(1113 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14939 202 1e-99
17976 177 6e-52
18083 129 8e-30
30765 37 0.042
>14939
Length = 1186
Score = 202 bits (513), Expect(2) = 1e-99, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 111/150 (74%)
Frame = -1
Query: 762 FPTKVRTLVADFSIVFSILLFCGIDACFGLQTPKLHVPSVIKPTRPDRGWFVAPFGKNPW 821
FPT VR ++DFS++ +IL D C GL TPKLHVP PT P RGW + P G+NPW
Sbjct: 1114 FPTMVRATLSDFSVLIAILSMVVFDICVGLPTPKLHVPETFAPTNPKRGWLINPVGENPW 935
Query: 822 WVYPASILPALLVTILIFMDQQITAVIVNRKENKLRKAAGYHLDLFWVGILMALCSFTGL 881
W A+++PALL ILIFMDQQITAVIVNRKENKL K GYHLDLF V +L+ LCSF GL
Sbjct: 934 WTTLAAVIPALLAVILIFMDQQITAVIVNRKENKLVKGRGYHLDLFIVSVLIILCSFLGL 755
Query: 882 PWYVAATVISIAHIDSLKMETETSAPGEQP 911
PW+VAATV+SI H++SLK E++ SAP P
Sbjct: 754 PWFVAATVLSINHVNSLKKESQCSAPANNP 665
Score = 181 bits (459), Expect(2) = 1e-99, Method: Compositional matrix adjust.
Identities = 85/146 (58%), Positives = 110/146 (75%), Gaps = 1/146 (0%)
Frame = -3
Query: 906 APGEQPQFLGVREQRVTGVMVFILTGISVFLAPILKYIPMPVLYGVFLYMGVASLNGIQF 965
PGEQP+FLGVREQRVTG+ +F+L GISV L +LK+IPMPVLYGVFLYMGV+SL G+Q
Sbjct: 683 CPGEQPKFLGVREQRVTGITIFLLIGISVMLTSVLKFIPMPVLYGVFLYMGVSSLRGMQL 504
Query: 966 WERCKLFLMPAKHQPDHAFLRHVPLRRIHLFTLVQILCLALLWILKS-TMAAIIFPVMIL 1024
R ++ MPAK+Q D FLRHV R+HLFT++QI CL LW +KS +I FP+M+L
Sbjct: 503 VHRVLIWFMPAKYQWDLMFLRHVRTNRVHLFTIIQIFCLLCLWGIKSYKKISIAFPIMVL 324
Query: 1025 GLIIVRRLLDLIFSQHDLAWIDNILP 1050
+ VR+ LD +F Q +L W+D+I+P
Sbjct: 323 AMCFVRKALDWVFDQRELKWLDDIMP 246
>17976
Length = 781
Score = 177 bits (448), Expect(2) = 6e-52, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 112/137 (81%), Gaps = 1/137 (0%)
Frame = +1
Query: 915 GVREQRVTGVMVFILTGISVFLAPILKYIPMPVLYGVFLYMGVASLNGIQFWERCKLFLM 974
GVREQR+TG+MV +L+G++V +LK+IPM VLYGVFLYMG+A+L G+QF +R L L
Sbjct: 139 GVREQRLTGLMVGLLSGLTVLFTAVLKFIPMAVLYGVFLYMGMAALKGMQFIDRILLMLK 318
Query: 975 PAKHQPDHAFLRHVPLRRIHLFTLVQILCLALLWILKSTMA-AIIFPVMILGLIIVRRLL 1033
PAK+QPD +LRHVP++R+H+FT +Q++CLA+LW++KS + +IIFP+M+LG VR+ L
Sbjct: 319 PAKYQPDTTYLRHVPIKRVHIFTAIQVVCLAVLWVIKSVKSVSIIFPIMVLGTCFVRKGL 498
Query: 1034 DLIFSQHDLAWIDNILP 1050
D +F+Q +L W+D+I+P
Sbjct: 499 DYLFTQGELKWLDDIMP 549
Score = 47.0 bits (110), Expect(2) = 6e-52, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +3
Query: 880 GLPW-YVAATVISIAHIDSLKMETETSAPGEQPQFLG 915
GLP VAATV ++AHI SLK E+E +APGE+P FLG
Sbjct: 30 GLPLGTVAATVSALAHIMSLKKESECTAPGERPTFLG 140
>18083
Length = 865
Score = 129 bits (323), Expect = 8e-30, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 122/217 (56%), Gaps = 5/217 (2%)
Frame = -3
Query: 836 ILIFMDQQITAVIVNRKENKLRKAAGYHLDLFWVGILMALCSFTGLPWYVAATVISIAHI 895
+L FMDQ I+A +VN +NK++K YH DL + ++ A+ S P AA S H+
Sbjct: 863 LLFFMDQNISAALVNAPQNKMKKGTAYHWDLLVIAVVNAVISVFAFPMVHAALPHSPLHV 684
Query: 896 DSLKMETETSAPGEQPQ-FLGVREQRVTGVMVFILTGISVFLAPILKYIPMPVLYGVFLY 954
+L E G Q + VRE R+T ++ IL G+S+ + +L YIP PVLYG+FLY
Sbjct: 683 RALADVEERVVQGHITQTVVRVRETRITAILSHILIGLSILIMFVLAYIPTPVLYGLFLY 504
Query: 955 MGVASLNGIQFWERCKLFLMPAKHQPDHAFLRHVPLRRIHLFTLVQILCLALLWILKSTM 1014
+ + +L Q +ER LF P ++RHVP R++H+FTL+Q+L L +L +
Sbjct: 503 VAITALYDNQMFERITLFFTEQSAYPPTHYIRHVPQRKVHIFTLIQLLQLVVLCVFGFVS 324
Query: 1015 AA---IIFPVMILGLIIVRRL-LDLIFSQHDLAWIDN 1047
A + FPV+I LI +R + + I Q +A ID+
Sbjct: 323 FAYLKMFFPVLIFLLIPIRHMVIPKIVEQKYIAAIDH 213
>30765
Length = 635
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = -3
Query: 134 WIKFEEKVEEGGERWSKPHVSTLSLHSLFELRTCLQTGTVLLDLDSCSL-PQIIDDVIEK 192
WI + WSKP ST ++HS RT L TG + L +CS+ P ++
Sbjct: 420 WISARLPLTRYSPSWSKPFFSTAAMHS----RTKLGTGALSLSHWACSVDPNTASLMMPC 253
Query: 193 QIEDGLLRPELRERVSYVLLRKHRHQTKKPIHRSLADI 230
+ + +R+ S +L+ R ++ P+ L+DI
Sbjct: 252 LMRSSWVGLRMRKLSSLLLMPAIRTRSAPPLSAPLSDI 139
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|19923869|ref|NP_612187.1| non-metastatic cells 7,
protein expressed in (nucleoside-diphosphate kinase) isoform 1 [Mus
musculus]
(395 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
32935 191 1e-99
02656 162 2e-40
02733 81 2e-16
14087 35 3e-06
31902 46 2e-05
30332 31 1.1
02658 29 3.6
17453 28 4.3
>32935
Length = 1188
Score = 191 bits (485), Expect(2) = 1e-99, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 109/150 (72%), Gaps = 6/150 (4%)
Frame = +1
Query: 251 NTAKFTNCTCCIIKPHAISEGMLGKNLIAIRDACFGMSAIQMFNLDRANVEEFYEVYKGV 310
NTA NCTCCIIKP A G+ GK + AI +A F + + +MF L++AN EEF EVYKGV
Sbjct: 694 NTASIGNCTCCIIKPSAFKAGVAGKIINAITEAGFRVGSAEMFTLEKANAEEFLEVYKGV 873
Query: 311 VSEYNDMVTELCSGPCVAIEIQQSNPTK------TFREFCGPADPEIARHLRPETLRAIF 364
V EY MVTEL SGPC+A+EI + T FRE GP DPEIARHLRP TLRA+F
Sbjct: 874 VHEYPAMVTELTSGPCLALEIVGGSGTNASLLAPAFRELAGPVDPEIARHLRPRTLRAMF 1053
Query: 365 GKTKVQNAVHCTDLPEDGLLEVQYFFKILD 394
G K++NAVHCTDLP+DG LEV+YFFKILD
Sbjct: 1054GTDKIKNAVHCTDLPDDGPLEVEYFFKILD 1143
Score = 190 bits (483), Expect(2) = 1e-99, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 144/232 (62%), Gaps = 6/232 (2%)
Frame = +2
Query: 24 ERFAFIAEWYDPNASLLRRYELLFYP---VDGSV---EMHDVKNRRTFLKRTKYEDLRLE 77
ER++FI EWYD ++ R++ ++ V G V E DV ++ +R + L
Sbjct: 11 ERYSFIVEWYDDMSARTLRFQFFYFTNSQVCGDVRHKEPQDVSANQSERQRAQ----SLR 178
Query: 78 DLFIGNKVNVFSRQLVLIDYGDQYTARQLGSRKEKTLALIKPDAVSKAGEIIEMINKSGF 137
+ R L ++DY D+YT R+L S++E+TL LIKPDAV K G++++ I + GF
Sbjct: 179 PVHWQQHQPPAPRLLTIVDYDDEYTRRKLTSKRERTLGLIKPDAVEKLGQVLDKILQKGF 358
Query: 138 TITKLRMMTLTRKEAADFHVDHHSRPFYNELIQFITSGPVIAMEILRDDAICEWKRLLGP 197
I++LRM L R A +F+ +H S+PF N L+ ++TSGPV+A EI+ ++A+ W+ +GP
Sbjct: 359 LISRLRMCKLDRNTALEFYQEHRSKPFLNALLDYVTSGPVVAFEIVGENAVGAWREAIGP 538
Query: 198 ANSGLSRTDAPGSIRALFGTDGVRNAAHGPDTFASAAREMELFFPSSGGCGP 249
+ L+R +AP SIRA +GTD NA HG D+ SAARE+E FFPSSG P
Sbjct: 539 TDPSLARKEAPTSIRAQYGTDVTCNAVHGSDSPGSAAREVEFFFPSSGSHSP 694
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 70/132 (53%)
Frame = +2
Query: 259 TCCIIKPHAISEGMLGKNLIAIRDACFGMSAIQMFNLDRANVEEFYEVYKGVVSEYNDMV 318
T +IKP A+ + LG+ L I F +S ++M LDR EFY+ ++ N ++
Sbjct: 284 TLGLIKPDAVEK--LGQVLDKILQKGFLISRLRMCKLDRNTALEFYQEHRSK-PFLNALL 454
Query: 319 TELCSGPCVAIEIQQSNPTKTFREFCGPADPEIARHLRPETLRAIFGKTKVQNAVHCTDL 378
+ SGP VA EI N +RE GP DP +AR P ++RA +G NAVH +D
Sbjct: 455 DYVTSGPVVAFEIVGENAVGAWREAIGPTDPSLARKEAPTSIRAQYGTDVTCNAVHGSDS 634
Query: 379 PEDGLLEVQYFF 390
P EV++FF
Sbjct: 635 PGSAAREVEFFF 670
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Frame = +1
Query: 113 TLALIKPDAVSK--AGEIIEMINKSGFTITKLRMMTLTRKEAADF-----HVDHHSRPFY 165
T +IKP A AG+II I ++GF + M TL + A +F V H Y
Sbjct: 718 TCCIIKPSAFKAGVAGKIINAITEAGFRVGSAEMFTLEKANAEEFLEVYKGVVHE----Y 885
Query: 166 NELIQFITSGPVIAMEILRDDAI------CEWKRLLGPANSGLSRTDAPGSIRALFGTDG 219
++ +TSGP +A+EI+ ++ L GP + ++R P ++RA+FGTD
Sbjct: 886 PAMVTELTSGPCLALEIVGGSGTNASLLAPAFRELAGPVDPEIARHLRPRTLRAMFGTDK 1065
Query: 220 VRNAAHGPDTFASAAREMELFF 241
++NA H D E+E FF
Sbjct: 1066IKNAVHCTDLPDDGPLEVEYFF 1131
>02656
Length = 2642
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 154/288 (53%), Gaps = 4/288 (1%)
Frame = +3
Query: 111 EKTLALIKPDAVSKAGE-IIEMINKSGFTITKLRMMTLTRKEAADFHVDHHSRPFYNELI 169
++TLALI+PDA + + I+E I ++GF I + ++LT+++A +F+ +H +P+Y+EL
Sbjct: 669 QRTLALIRPDAFANNKDAILEKIKEAGFQIALHKEVSLTKEQAEEFYKEHAGQPYYDELT 848
Query: 170 QFITSGPVIAMEILRDDAICEWKRLLGPANSGLSRTDAPGSIRALFGTDGVR-NAAHGPD 228
++SGP++A+ + R+DA+ W+ +LGP + ++T AP +RA F D N HG D
Sbjct: 849 DRMSSGPLLALGLAREDAVENWREMLGPTDVEEAKTAAPDCLRAQFAVDSTAINQLHGSD 1028
Query: 229 TFASAAREMELFFPSSGGCGPANTAKFTNCTCCIIKPHAISEGMLGKNLI--AIRDACFG 286
+ SA +E+E FFP T +IKP +G K+ I I A F
Sbjct: 1029STQSAKKELEFFFP-------------VEQTVAMIKP----DGYGTKDAIIEKIHQAGFR 1157
Query: 287 MSAIQMFNLDRANVEEFYEVYKGVVSEYNDMVTELCSGPCVAIEIQQSNPTKTFREFCGP 346
++A + + R E FY+ K Y +V + SGP + + + + +RE GP
Sbjct: 1158IAARKETTITRDIAESFYDDQKD-KDYYESLVEHMTSGPTMFMVLSREGAVDGWREEIGP 1334
Query: 347 ADPEIARHLRPETLRAIFGKTKVQNAVHCTDLPEDGLLEVQYFFKILD 394
DP A+ P +LRA FG +QNAVH E+ +++ F LD
Sbjct: 1335TDPTKAKEQNPNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVFGDLD 1478
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 9/289 (3%)
Frame = +3
Query: 113 TLALIKPDAVS--KAGEIIEMINKSGFTITKLRMMTLTRKEAADFHVDHHSRPFYNELIQ 170
T+A+IKP+ V+ K EI+ + G + LT EA +F+ ++ +L+
Sbjct: 219 TVAIIKPNVVANGKVDEILAEMKARGINVKAQEERQLTEDEAREFYSHLQGEEYFEDLVA 398
Query: 171 FITSGP---VIAMEILRDDAIC-EWKRLLGPANSGLSRTDAPGSIRALFGTDGVRNAAHG 226
F+ SGP ++ E DD++ +W+ +LGP ++ AP S+RA +G G+ NA HG
Sbjct: 399 FMASGPSHVLVLTEGQEDDSVVKDWRDMLGPPTVEDAKEQAPESLRARYGQGGLMNAVHG 578
Query: 227 PDTFASAAREMELFFPSSGGCGPANTAKFTNCTCCIIKPHAISEGMLGKNLI--AIRDAC 284
D+ +AARE+ FFP K T +I+P A + K+ I I++A
Sbjct: 579 SDSKETAARELAFFFPHMQAPKLQKKKKEVQRTLALIRPDAFAN---NKDAILEKIKEAG 749
Query: 285 FGMSAIQMFNLDRANVEEFYEVYKGVVSEYNDMVTELCSGPCVAIEIQQSNPTKTFREFC 344
F ++ + +L + EEFY+ + G Y+++ + SGP +A+ + + + + +RE
Sbjct: 750 FQIALHKEVSLTKEQAEEFYKEHAGQPY-YDELTDRMSSGPLLALGLAREDAVENWREML 926
Query: 345 GPADPEIARHLRPETLRAIFG-KTKVQNAVHCTDLPEDGLLEVQYFFKI 392
GP D E A+ P+ LRA F + N +H +D + E+++FF +
Sbjct: 927 GPTDVEEAKTAAPDCLRAQFAVDSTAINQLHGSDSTQSAKKELEFFFPV 1073
>02733
Length = 853
Score = 80.9 bits (198), Expect(2) = 2e-16, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 64/110 (58%)
Frame = -1
Query: 132 INKSGFTITKLRMMTLTRKEAADFHVDHHSRPFYNELIQFITSGPVIAMEILRDDAICEW 191
I+++GF I + T+TR A F+ D + +Y L++ +TSGP + M + R+ A+ W
Sbjct: 742 IHQAGFRIAARKETTITRDIAESFYDDQKDKDYYESLVEHMTSGPTMFMVLSREGAVDGW 563
Query: 192 KRLLGPANSGLSRTDAPGSIRALFGTDGVRNAAHGPDTFASAAREMELFF 241
+ +GP + ++ P S+RA FGTD ++NA HG + A ++++ F
Sbjct: 562 REEIGPTDPTKAKEQNPNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVF 413
Score = 22.3 bits (46), Expect(2) = 2e-16, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 111 EKTLALIKPDAVSKAGEII 129
++TLALI+PDA + + I
Sbjct: 807 QRTLALIRPDAFANNKDAI 751
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%)
Frame = -1
Query: 280 IRDACFGMSAIQMFNLDRANVEEFYEVYKGVVSEYNDMVTELCSGPCVAIEIQQSNPTKT 339
I A F ++A + + R E FY+ K Y +V + SGP + + + +
Sbjct: 742 IHQAGFRIAARKETTITRDIAESFYDDQKDK-DYYESLVEHMTSGPTMFMVLSREGAVDG 566
Query: 340 FREFCGPADPEIARHLRPETLRAIFGKTKVQNAVHCTDLPEDGLLEVQYFFKILD 394
+RE GP DP A+ P +LRA FG +QNAVH E+ +++ F LD
Sbjct: 565 WREEIGPTDPTKAKEQNPNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVFGDLD 401
>14087
Length = 2025
Score = 35.0 bits (79), Expect(2) = 3e-06, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 164 FYNELIQFITSGPVIAMEILRDDAICEWKRLLGPAN 199
+Y L++ +TSGP + M + R+ A+ W+ +GP +
Sbjct: 2 YYESLVEHMTSGPTMFMVLSREGAVDGWREEIGPTD 109
Score = 33.5 bits (75), Expect(2) = 3e-06, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 208 PGSIRALFGTDGVRNAAHGPDTFASAAREMELFF 241
P S+RA FGTD ++NA HG + A ++++ F
Sbjct: 135 PNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVF 236
Score = 33.9 bits (76), Expect(2) = 1e-04, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 352 ARHLRPETLRAIFGKTKVQNAVHCTDLPEDGLLEVQYFFKILD 394
A+ P +LRA FG +QNAVH E+ +++ F LD
Sbjct: 120 AKEQNPNSLRAQFGTDVLQNAVHGASSSEEAKKKIKAVFGDLD 248
Score = 28.9 bits (63), Expect(2) = 1e-04, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 314 YNDMVTELCSGPCVAIEIQQSNPTKTFREFCGPADP 349
Y +V + SGP + + + + +RE GP DP
Sbjct: 5 YESLVEHMTSGPTMFMVLSREGAVDGWREEIGPTDP 112
>31902
Length = 546
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 191 WKRLLGPANSGLSRTDAPGSIRALFGTDGVRNAAHGPDTFASAAREMELFFP 242
W+ +GP + L+R +AP SIRA +GTD NA HG D+ + + L P
Sbjct: 388 WREAIGPTDPSLARKEAPTSIRAQYGTDVTCNAVHGSDSPGNWPVPLTLRLP 543
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%)
Frame = +1
Query: 306 VYKGVVSEYNDMVTELCSGPCVAIEIQQSNPTKTFREFCGPADPEIARHLRPETLRAIFG 365
+ KG S +N +T C A S +RE GP DP +AR P ++RA +G
Sbjct: 292 MMKGTASSWNGTMT--CQHAPCASSSSTSPTPSLWREAIGPTDPSLARKEAPTSIRAQYG 465
Query: 366 KTKVQNAVHCTDLP 379
NAVH +D P
Sbjct: 466 TDVTCNAVHGSDSP 507
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 24 ERFAFIAEWYDPNASLLRRYELLFYPVDGSVE 55
ER++FI EWYD ++ R++ ++ SVE
Sbjct: 297 ERYSFIVEWYDDMSARTLRFQFFYFTNSKSVE 392
>30332
Length = 401
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 19/96 (19%)
Frame = +1
Query: 196 GPANSGLSRTDAPGSIRALFGTD------GVRNAAHGPDTFASAAR-EMELFFPSSGGCG 248
GPA +G S T+ PG+ GT G R H F SSGG G
Sbjct: 4 GPAGTGQS*TEGPGAQTKQTGTSPERYQPGDRQEGHRVQGLGQQGEGRTTKFAKSSGGLG 183
Query: 249 PANTAKFTNC------------TCCIIKPHAISEGM 272
+T + NC T C +PH S G
Sbjct: 184 ALHTKREGNCGRTARQRGYTRQTSCRDRPHERSGGQ 291
>02658
Length = 1185
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 200 SGLSRTDAPGSIRALFGTDGVRNAAHGPDTFASAAREMELFFPSSGG 246
SG RTD G +LFG+DG ++ G T +R +++ GG
Sbjct: 139 SGFGRTDTLGCGGSLFGSDGNQSVHGGDKTARPGSRVLQICGGHYGG 279
>17453
Length = 469
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +3
Query: 217 TDGVRNAAHGPDTFASAAREMELFF-----PSSGGCGPANTAKFTNCTCCIIKPHAISEG 271
T V+ ++ P ++ ++ LF PSSG +NTA F + +KP I +G
Sbjct: 6 TPSVKKSSFQPSVSSATKSKLSLFSAPEPGPSSGESSQSNTASFLHNKLDFLKPDKIRDG 185
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|46049022|ref|NP_079826.2| proteasome, 26S, non-ATPase
regulatory subunit 6 [Mus musculus]
(389 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
18013 359 1e-99
>18013
Length = 1013
Score = 359 bits (921), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/217 (79%), Positives = 191/217 (88%)
Frame = +1
Query: 173 DWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALE 232
DWDRRNRLKVY+G+YC++IR FK+AA LFLDT++TFTSYELMDY FVTYTV S+IALE
Sbjct: 1 DWDRRNRLKVYRGVYCMSIRQFKEAATLFLDTIATFTSYELMDYPQFVTYTVICSVIALE 180
Query: 233 RPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHY 292
RP LREKV KG+EILEVLH LP V++YLFSLY+C YS FF SLA VE+ M+ D L A HY
Sbjct: 181 RPKLREKVTKGSEILEVLHGLPKVKRYLFSLYDCHYSEFFLSLAEVEEMMQTDRLMAAHY 360
Query: 293 RYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNE 352
RYYVREMRI AY+QLLESYRSLTL YMA+AFGV VDFIDQELSRFIAAGRLHCKIDKV
Sbjct: 361 RYYVREMRIMAYAQLLESYRSLTLDYMADAFGVTVDFIDQELSRFIAAGRLHCKIDKVGG 540
Query: 353 IVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 389
IVETNRPDSKNWQYQ TIK GD+LLNRVQKLSRVIN+
Sbjct: 541 IVETNRPDSKNWQYQSTIKHGDILLNRVQKLSRVINI 651
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|28076969|ref|NP_081905.1| phosphoglucomutase 2-like 1
[Mus musculus]
(621 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27797 359 2e-99
04593 29 5.1
25536 28 10.0
>27797
Length = 1266
Score = 359 bits (922), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/395 (47%), Positives = 256/395 (64%), Gaps = 1/395 (0%)
Frame = -2
Query: 206 IEECVEPWNDSWNDNLVDTSPLKKDPLQDICKKYMEDLKKICFYRDLNSKTTLKFVHTSF 265
+E + P SW+ +++ PL KDP ++ +KY K +C++R+ NS ++L+ V+T+
Sbjct: 1226 FQENLVPVASSWDVSILKDHPLCKDPYAEVLEKYNAAAKVLCYHRENNSSSSLRVVYTAM 1047
Query: 266 HGVG-HDYVQLAFQVFGFKPPIPVPEQKDPDPDFSTVKCPNPEEGESVLELSLRLAEKEN 324
HG G + + F + + + F +EG L LS++ A+ N
Sbjct: 1046 HGGGLTPMCRSVSKPSAFICQCQLNNRLNQIRSFPL*FTLILKEGRG-LALSMKKADDTN 870
Query: 325 ARIVLATDPDADRLAVAELQENGRWKVFTGNELAALFGWWMFDCWKKNKPNADVKNVYML 384
+++A DPDADRLAVAE NG WK+FTGNEL AL G+W++ +++ P+ +VYML
Sbjct: 869 CPVIVANDPDADRLAVAEKLPNGEWKIFTGNELGALLGYWLWTSFRQQNPDVPGTDVYML 690
Query: 385 ATTVSSKILKAIALKEGFHFEETLPGFKWIGSRIKDLLGNGKEVLFAFEESIGFLCGTSV 444
A+TVSSKIL+ +AL EGF FEETL GFKW+G+R +L GK VLFAFEE+IGF+CG++V
Sbjct: 689 ASTVSSKILQTMALMEGFKFEETLTGFKWMGNRTAELQKMGKTVLFAFEEAIGFMCGSNV 510
Query: 445 LDKDGXXXXXXXXEMASFLDTRKVTLMEQLTKVYEIYGYHMSKTSYFLCYDPPTIKTIFE 504
LDKDG E AS L + TL +QLT +Y YGYH+S SY++C DP TI+ +F
Sbjct: 509 LDKDGVTAAAVITEFASRLYAQNSTLEKQLTAIYSKYGYHLSSNSYYICNDPATIQRMFT 330
Query: 505 RIRNFESPKEYPKFCGAFAILHVRDITTGYDSSQPNKKSVLPVSKNSQMITFTFQNGCVA 564
+R +YPK CG++ I VRD+T GYDSSQP+ K +LPVSK+SQMITFTF+NGCVA
Sbjct: 329 ELRKCGGENKYPKACGSYKISGVRDLTVGYDSSQPDNKPLLPVSKSSQMITFTFENGCVA 150
Query: 565 TLRTSGTEPKIKYYAEMCASPGQSDTTFLEEELKK 599
TLRTSGTEPKIKYY E P ++ ++E E K
Sbjct: 149 TLRTSGTEPKIKYYTEHRPDPSKN---WIEREQNK 54
>04593
Length = 1639
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 328 VLATDPDADRLAVAELQENGRWKV 351
V +TDPD + LAVA++ E WK+
Sbjct: 206 VTSTDPDVNILAVADVMETRGWKI 277
>25536
Length = 486
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 215 DSWNDNLVDTSPLKKDPLQDICKKYMEDLKKICFYRDLNSKTTLKFVHTSFHGVGHDYVQ 274
D W + L D L ++ ++ +C+K E L K +++ T V HG HD ++
Sbjct: 73 DQWIEQLNDCKQLSENQVKTLCEKAKEILSKESNVQEVKCPVT---VCGDVHGQFHDLME 243
Query: 275 LAFQVFGFKP 284
L F++ G P
Sbjct: 244 L-FRIGGKSP 270
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|29825827|ref|NP_821170.1| vacuolar protein sorting 26
homolog B [Mus musculus]
(336 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01953 357 4e-99
01034 266 9e-72
13123 67 1e-11
05131 47 9e-06
11860 32 0.51
>01953
Length = 1732
Score = 357 bits (916), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 195/222 (87%), Gaps = 5/222 (2%)
Frame = -2
Query: 98 EITQSQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLNDVVKEMDIVVHTLSTYPE 157
++T +Q++ FEF VEKPYESYTG NV+LRYFLR TI +R++DVVKE DIVVHTLS YP+
Sbjct: 1731 DLTHNQSYPFEFQQVEKPYESYTGANVRLRYFLRVTIVKRISDVVKEQDIVVHTLSQYPD 1552
Query: 158 LNSSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGT 217
+N+SIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHME+ +IKRETTGT
Sbjct: 1551 MNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMELQVIKRETTGT 1372
Query: 218 GPNVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVLI 277
GPN ++EN+TIAKYEIMDGAPVRGESIPIRLFL+GYELTP+MRDINKKFSV+YYLNLVL+
Sbjct: 1371 GPNTFNENETIAKYEIMDGAPVRGESIPIRLFLSGYELTPSMRDINKKFSVKYYLNLVLV 1192
Query: 278 DEEERRYFKQQEVVLWRKGDIVRKSMS-----HQAAIASQRF 314
DEEERRYFKQQE++++RK D RK+ HQ Q F
Sbjct: 1191 DEEERRYFKQQEIIIFRKADXQRKNYQMALQHHQPVNPPQGF 1066
>01034
Length = 522
Score = 266 bits (680), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 122/154 (79%), Positives = 141/154 (91%)
Frame = -1
Query: 67 KIEFIGQIELYYDRGNHHEFVSLVKDLARPGEITQSQAFDFEFTHVEKPYESYTGQNVKL 126
K+EFIGQIELYYDRGNHHEF SLVK+LARPG++T +Q++ FEF VEKPYESYTG NV+L
Sbjct: 465 KVEFIGQIELYYDRGNHHEFTSLVKELARPGDLTHNQSYPFEFQQVEKPYESYTGANVRL 286
Query: 127 RYFLRATISRRLNDVVKEMDIVVHTLSTYPELNSSIKMEVGIEDCLHIEFEYNKSKYHLK 186
RYFLR TI +R++DVVKE DIVVHTLS YP++N+SIKMEVGIEDCLHIEFEYNKSKYHLK
Sbjct: 285 RYFLRVTIVKRISDVVKEQDIVVHTLSQYPDMNNSIKMEVGIEDCLHIEFEYNKSKYHLK 106
Query: 187 DVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPN 220
D IVGKIYFLLVRIKI++ME+ I++RETTG GPN
Sbjct: 105 DAIVGKIYFLLVRIKIRYMELAIVRRETTGAGPN 4
>13123
Length = 523
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Frame = +3
Query: 174 IEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVY 222
+ + + ++YHLKD IVGKIYFLLVRIKI++ME+ I++RETTG G +
Sbjct: 186 LTWSWWTARYHLKDAIVGKIYFLLVRIKIRYMELAIVRRETTGAGTAAW 332
>05131
Length = 864
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Frame = +1
Query: 107 FEFTHVEKP----YESYTGQNVKLRYFLRATISRRL--NDVVKEMDIVVH---------- 150
FE KP YE+Y G V ++Y +R + R L D+ K+ + ++
Sbjct: 31 FEVPLKPKPGKTLYETYHGVFVNIQYMIRVEMKRSLLNKDLQKQCEFIIEYKSQEEKAKP 210
Query: 151 ---TLSTYPELNSSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEI 207
S PE + +K + I ++ + S + D + G++ + +K +EI
Sbjct: 211 KPVNFSISPETLAGVKEKQNIPK-FKVKGKLESSCVKITDPLKGELVLEHCEVPVKSIEI 387
Query: 208 DIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYELTPTMRDINKKFS 267
+++ ET G + I +I DG R +IPI + PT+ N K
Sbjct: 388 QMVRVETCGCAEGYAKDATEIQNIQIADGDVCRNLAIPIYMIFPRLFTCPTLSTNNFKIG 567
Query: 268 VRY 270
Y
Sbjct: 568 DTY 576
>11860
Length = 944
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 25/121 (20%)
Frame = +3
Query: 70 FIGQIELYYDRGN-----------HHEFVSLVKDLARPGEITQSQAFDFEFTHVEKPYES 118
FI + E+YY R HH+F L KD+ P Q Q F F K +
Sbjct: 192 FINEKEVYYLRALGDDPRKDIADIHHQFPELAKDITFPDFFEQDQFFSSVFRIASKGLQL 371
Query: 119 YTGQNVKLRYFLRATISRRL--------------NDVVKEMDIVVHTLSTYPELNSSIKM 164
+T +V ++ T +R+ D +DI L+ +P +++M
Sbjct: 372 WTHYDVMDNLLIQVTGKKRVVLFSPQDAEKLYLQGDKSSVLDIDNPDLTRFPLFARAVRM 551
Query: 165 E 165
E
Sbjct: 552 E 554
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|41054806|ref|NP_032164.2| guanine nucleotide binding
protein (G protein), alpha inhibiting 2 [Mus musculus]
(355 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11965 357 6e-99
13527 267 4e-72
29196 140 1e-33
20516 114 5e-26
34094 70 1e-12
09827 49 4e-06
08153 48 5e-06
10862 45 3e-05
18949 40 0.001
11378 38 0.006
18208 31 0.61
08297 30 2.0
01191 29 3.7
01021 27 8.7
>11965
Length = 3256
Score = 357 bits (915), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/222 (75%), Positives = 189/222 (85%)
Frame = +1
Query: 134 DHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGIVETHFTFK 193
D GVQ CF RS EYQLNDSA Y+L+DL+R+ DY+PT+QD+LRTRVKTTGIVE HF+FK
Sbjct: 1 DSGVQDCFSRSNEYQLNDSAKYFLDDLDRLGTKDYMPTEQDILRTRVKTTGIVEVHFSFK 180
Query: 194 DLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMKLFDS 253
+L+FK+FDVGGQRSERKKWIHCFE VTAIIFCVA+S YD VL EDE NRM ES+KLFDS
Sbjct: 181 NLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDS 360
Query: 254 ICNNKWFTDTSIILFLNKKDLFEEKITQSSLTICFPEYTGANKYDEAASYIQSKFEDLNK 313
ICNNKWFTDTSIILFLNKKDLFEEKI +S LT+CFPEYTG Y+E A+YIQ++FE NK
Sbjct: 361 ICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTVCFPEYTGKQTYEEVAAYIQAQFEAKNK 540
Query: 314 RKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF 355
KEIY H TCATDT N+QFVFDAVTDVII NNL+ CGL+
Sbjct: 541 SSQ-KEIYCHQTCATDTNNIQFVFDAVTDVIIANNLRGCGLY 663
>13527
Length = 1091
Score = 267 bits (683), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 158/198 (79%)
Frame = -2
Query: 1 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDG 60
MGCT+SAE++AA ERSK I+KNL+EDG +AA+++KLLLLGAGESGKSTIVKQMKIIHE G
Sbjct: 1042 MGCTLSAEERAAMERSKAIEKNLKEDGMQAAKDIKLLLLGAGESGKSTIVKQMKIIHEGG 863
Query: 61 YSEEECRQYRAVVYSNTIQSIMAIVKAMGNLQIDFADPQRADDARQLFALSCAAEEQGML 120
++ E+ +QYR VV+SNTIQS++AI++AMG L I F D +R DA+ + + E+
Sbjct: 862 FTSEDNKQYRPVVFSNTIQSLVAIIRAMGTLSIPFGDNERESDAKMVLDVIARMEDTEPF 683
Query: 121 PEDLSGVIRRLWADHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRV 180
E+L + RLW D GVQ CF RS EYQLNDSA Y+L+DL+R+ DY+PT+QD+LRTRV
Sbjct: 682 SEELLAAMERLWMDSGVQDCFSRSNEYQLNDSAKYFLDDLDRLGTKDYMPTEQDILRTRV 503
Query: 181 KTTGIVETHFTFKDLHFK 198
KTTGIVE HF+FK+L+FK
Sbjct: 502 KTTGIVEVHFSFKNLNFK 449
>29196
Length = 431
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 95/146 (65%), Gaps = 3/146 (2%)
Frame = -2
Query: 126 GVIRRLWADHGVQACFGRSRE-YQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTG 184
++RLW D GVQ C SR N + ++ + I + I +Q + ++
Sbjct: 430 AAMKRLWLDSGVQEC---SRAATNTN*TIPLNISWMI*IG*ALRITSQPNRTFCAPESRP 260
Query: 185 IVETHF--TFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMN 242
F K+L+FK+FDVGGQRSERKKWIHCFE VTAIIFCVA+S YD VL EDE N
Sbjct: 259 PAL*RFISPLKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTN 80
Query: 243 RMHESMKLFDSICNNKWFTDTSIILF 268
RM ES+KLFDSICNNKWFTDTSIILF
Sbjct: 79 RMQESLKLFDSICNNKWFTDTSIILF 2
>20516
Length = 534
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 1/161 (0%)
Frame = +2
Query: 191 TFKDLHFKMFDV-GGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMK 249
TF+++ F + +V GGQRS+R+KW CF G+T+I+F A S +D VL ED + NR+ ES
Sbjct: 41 TFRNIFFLVGEVTGGQRSQRQKWYQCFVGITSILFLAASSEFDQVLMEDRKTNRLQESCD 220
Query: 250 LFDSICNNKWFTDTSIILFLNKKDLFEEKITQSSLTICFPEYTGANKYDEAASYIQSKFE 309
+F++I NNK F+ SIILFLNK DL ++K L F ++G ++ + I +
Sbjct: 221 IFETIINNKSFSGVSIILFLNKMDLLQDKN*ACQLRRLFSRFSG*SQGH*CSQSI*ASAV 400
Query: 310 DLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLK 350
+ HFT A DT+N++ VF V D I+ +NL+
Sbjct: 401 *FAPT*SKQTFVHHFTTAIDTENIKHVFQDVKDTILHDNLR 523
>34094
Length = 452
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +1
Query: 54 KIIHEDGYSEEECRQYRAVVYSNTIQSIMAIVKAMGNLQIDFADPQRA 101
+IIHE GYS+EEC QY+ VVYSN IQS++AIV+AM L ++F P RA
Sbjct: 103 RIIHEKGYSQEECLQYKPVVYSNAIQSMIAIVRAMNLLSVEFGHPDRA 246
>09827
Length = 1201
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 12/162 (7%)
Frame = -3
Query: 178 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAE 237
T + T G +K++ F ++DVGGQ R W H F+ +IF V + + V
Sbjct: 1034 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERVQEA 855
Query: 238 DEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITQSSLTICFPEYTGANKY 297
EE+ RM +L D++ +++F NK+DL + T E G +
Sbjct: 854 REELTRMLNEDELRDAV----------LLVFANKQDL-----PHAMATAEITEKLGLHGL 720
Query: 298 DEAASYIQSK--------FEDL----NKRKDTKEIYTHFTCA 327
YIQS +E L N+ K+ K +T C
Sbjct: 719 RNRTWYIQSTCATTGDGLYEGLDWLSNQLKNNKS*WTCLLCP 594
>08153
Length = 1703
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%)
Frame = +1
Query: 178 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAE 237
T + T G +K++ F ++DVGGQ R W H F+ +IF V + + +
Sbjct: 163 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERINEA 342
Query: 238 DEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDL 274
EE+ RM L D+I I++F NK+DL
Sbjct: 343 KEELARMLNEDDLRDAI----------ILVFANKQDL 423
>10862
Length = 2896
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%)
Frame = -3
Query: 192 FKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMKLF 251
++ F ++DVGGQ R W H + G +IF V + D + +E++R
Sbjct: 2495 LQECQFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHR-------- 2340
Query: 252 DSICNNKWFTDTSIILFLNKKDL 274
I N++ D I++F NK+DL
Sbjct: 2339 --IINDREMRDAIILIFANKQDL 2277
>18949
Length = 414
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +3
Query: 181 KTTGIVETH-FTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDE 239
+ TG+ + + + F FD+GG R R+ W F V I+F V +
Sbjct: 12 RPTGLPTSEELSMGGMTFTTFDLGGHRQARRVWKDYFPAVDGIVFIVDV----------H 161
Query: 240 EMNRMHESMKLFDSICNNKWFTDTSIILFLNKKD 273
+ R+ E+ DS+ + D +++ NK D
Sbjct: 162 DTERITEAKAELDSLLRDDQIADIPVLVLGNKMD 263
>11378
Length = 1688
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%)
Frame = +3
Query: 172 QQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAY 231
+ D + V T + + F FD+GG R R+ W F V I+F
Sbjct: 384 KDDKMAQHVPTLHPTSEELSMGGMRFTTFDLGGHRQARRVWKDYFPAVDGIVF------- 542
Query: 232 DLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKD 273
LV D E R+ E+ DS+ ++ + I++ NK D
Sbjct: 543 -LVDVHDRE--RLVEAKAELDSLMTDEQVANAPILVLGNKID 659
>18208
Length = 458
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 193 KDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCV 226
K ++D+GGQR R W + FE +I+ +
Sbjct: 176 KGFKLNVWDIGGQRRIRPYWKNYFENTDLLIYVI 75
>08297
Length = 541
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 320 IYTHFTCATDTKNVQFVFDAVTDVIIKN 347
I+ HFTCAT K FV +T +I+ N
Sbjct: 5 IFHHFTCATPRKKSPFVVCFITQIILIN 88
>01191
Length = 1681
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 271 KKDLFEEKITQSSLTICFPEYTGANKY 297
K +F KITQS TI FP Y G +K+
Sbjct: 435 KLGIFVPKITQSVDTIAFPCYWGQSKF 355
>01021
Length = 2238
Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 4 TVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLG 40
T+++ ++ + S+M+D LRED +A+R +K + G
Sbjct: 812 TLNSLERDCDQISRMVDDKLREDSARASRNLKARVRG 922
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|21450241|ref|NP_659093.1| propionyl-Coenzyme A
carboxylase, alpha polypeptide [Mus musculus]
(724 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07274 252 1e-98
15060 250 2e-66
30553 47 3e-05
34243 44 3e-04
31960 43 4e-04
04102 30 4.4
>07274
Length = 1377
Score = 252 bits (643), Expect(2) = 1e-98, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 162/234 (69%)
Frame = +1
Query: 367 QEMILVAKGYPLRHKQEDIPISGWAVECRVYAEDPYKSFGLPSIGRLSQYQEPIHLPGVR 426
M+ VAKG+ L H+Q DIP+ GW+ ECRVYAEDP+K+FG+PSIGRLS+Y EP H+P VR
Sbjct: 1 HHMLRVAKGHELLHQQSDIPVDGWSFECRVYAEDPFKNFGMPSIGRLSRYIEPAHIPNVR 180
Query: 427 VDSGIQPGSDISIYYDPMISKLVTYGSDRAEALKRMEDALDNYVIRGVTHNIPLLREVII 486
DSGIQ GS+ISIYYDPMI KLVT+G DR A+ M ALD+YVI+GVTHNIPLLR+++
Sbjct: 181 CDSGIQEGSEISIYYDPMICKLVTFGEDRQSAINTMITALDSYVIKGVTHNIPLLRDIMT 360
Query: 487 NTRFVKGDISTKFLSDVYPDGFKGHTLTLSERNQLLAIASSVFVASQLRAQRFQERSRVP 546
RFV+GDI+T +L +V+PDGFKG L+ E QL+A+A +V R++ F ++R+P
Sbjct: 361 EGRFVQGDINTNYLPEVFPDGFKGKQLSEGEVEQLVALACAVHETHNQRSEDFINQTRMP 540
Query: 547 VIRPDVAKWELSVKLHDEDHTVVASNNGPAFTVEVDGSKLNVTSTWNLASPLLS 600
V + + W+++V++ + + + A+ V V + VT ASP +
Sbjct: 541 VTKDTRSSWDMAVEMAGTLYPATLTKHNTAYEVTVGDNLYTVTGELAFASPCWT 702
Score = 127 bits (318), Expect(2) = 1e-98, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 91/132 (68%)
Frame = +3
Query: 593 NLASPLLSVNVDGTQRTVQCLSREAGGNMSIQFLGTVYKVHILTKLAAELNKFMLEKVPK 652
+L PLL + V+G ++ +Q + R G N ++ GTV+ V +L +AA + +FM EK
Sbjct: 678 SLRFPLLDLMVNGHRQLLQLVERGYGCNYKLRLFGTVFSVRVLDSVAASMQQFMPEKKEV 857
Query: 653 DTSSTLCSPMPGVVVAVSVKPGDMVAEGQEICVIEAMKMQNSMTAGKMGKVKLVHCKAGD 712
D SS + +PMPG++ +V V+ GD VAEGQE+C++EAMKMQNS+ A K+ VK V+ K G+
Sbjct: 858 DMSSVVLAPMPGMLKSVDVQVGDQVAEGQEVCILEAMKMQNSLVAAKVSTVKKVNFKTGE 1037
Query: 713 TVGEGDLLVELE 724
TV EGD++VE E
Sbjct: 1038TVNEGDVIVEFE 1073
>15060
Length = 935
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 192/294 (65%), Gaps = 3/294 (1%)
Frame = -2
Query: 139 YGFLSENKEFAKRLAAEDVTFIGPDTHAIQAMGDKIESKLLAKRAKVNTIPGFDGVVKDA 198
YGFLSE +FA+ + F+GP + MGDK+E++ A A V +PG G V A
Sbjct: 934 YGFLSERPDFAQACVDAGIHFVGPSPEVVHRMGDKVEARQSAINAGVQVVPGTPGPVASA 755
Query: 199 DEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRFSSQEAASSFGDDRLLIEK 258
+EA+ +E G PV+ KA+ GGGG+GMR+ + EE + F + EA ++FGD L IEK
Sbjct: 754 EEAMEFCKEHGLPVIFKAAFGGGGRGMRVVRNLEEVEENFNRAFSEALAAFGDGSLFIEK 575
Query: 259 FIDNPRHIEIQVLGDKHGNALWLNERECSIQRRNQKVVEEAPSIFLDPETRQAMGEQAVA 318
FI+ PRHIE+Q+LGD+ GN + L ER+CS+QRR+QKVVE AP+ LD E R M AV
Sbjct: 574 FIERPRHIEVQLLGDRTGNVIHLYERDCSVQRRHQKVVEIAPAPQLDSEVRTKMANDAVR 395
Query: 319 LAKAVKYSSAGTVEFLVDSQKNFYFLEMNTRLQVEHPVTECITGLDLVQEMILVAKGYPL 378
LAK V Y +AGTVEFL+D +YF+E+N RLQVEH VTE +TG+DLVQ I +A+G L
Sbjct: 394 LAKFVGYENAGTVEFLLDKNGQYYFIEVNARLQVEHTVTEQVTGVDLVQAQIRIAEGKTL 215
Query: 379 RH---KQEDIPISGWAVECRVYAEDPYKSFGLPSIGRLSQYQEPIHLPGVRVDS 429
Q+ I ++G A++CR+ EDP ++F P GR+ ++ + G+R+DS
Sbjct: 214 SDLDLTQDKIQLNGCAIQCRMTTEDPARNF-QPDTGRIEVFRSGEGM-GIRLDS 59
>30553
Length = 615
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +2
Query: 649 KVPKDTSSTLCSPMPGVVVAVSVKPGDMVAEGQEICVIEAMKMQNSMTAGKMGKVKLV 706
K K ++ +PMPG V+ + VK GD V +GQ + V+ AMKM+ +TA G V+L+
Sbjct: 380 KALKGVRGSVGAPMPGEVIDIKVKEGDQVEKGQAVLVLSAMKMEMVVTAPMSGTVRLL 553
>34243
Length = 503
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = -1
Query: 659 CSPMPGVVVAVSVKPGDMVAEGQEICVIEAMKMQNSMTAGKMGKVKLVHCKAGDTVGEGD 718
+PMPGV+ V V G V +G+ + V+ AMKM+ + A + G V+ V AG TV +G
Sbjct: 425 VAPMPGVIERVLVSEGATVEQGEPLVVMIAMKMEYIIRAPRAGVVEKVMFAAGQTVAKGT 246
Query: 719 LLV 721
LV
Sbjct: 245 ALV 237
>31960
Length = 667
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 41/93 (44%)
Frame = -2
Query: 447 KLVTYGSDRAEALKRMEDALDNYVIRGVTHNIPLLREVIINTRFVKGDISTKFLSDVYPD 506
+ + + D A +M AL + IRGV NIP L V+ N +F+ G + T F+ D P
Sbjct: 657 RFIAHARDHPTASSKMLRALKEFRIRGVKTNIPFLLNVLQNDKFLTGVVDTYFI-DENPQ 481
Query: 507 GFKGHTLTLSERNQLLAIASSVFVASQLRAQRF 539
F+ F ASQ RAQ+
Sbjct: 480 LFQ-------------------FQASQNRAQKL 439
>04102
Length = 1749
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 251 DDRLLIEKFIDNPRHIEIQVLGDKHGNALWLNEREC 286
D L +E D H+ I+ + DKHG A+ ++ R+C
Sbjct: 250 DFLLFVETKTDKQDHVFIKDIFDKHGYAINISSRKC 357
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|60218877|ref|NP_033017.2| ATP-binding cassette,
sub-family D, member 3 [Mus musculus]
(659 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12308 355 3e-98
19618 202 5e-52
19777 161 1e-39
05764 64 2e-10
01623 57 3e-08
02301 50 3e-06
30281 44 1e-04
22801 36 0.043
03538 36 0.043
01839 33 0.52
38795 32 0.70
33929 30 3.6
>12308
Length = 698
Score = 355 bits (912), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 163/232 (70%), Positives = 200/232 (86%), Gaps = 1/232 (0%)
Frame = -3
Query: 388 TARITELMQVLKDLNHGRYERTMVSQQEKGIEGAQAS-PLVPGAGEIINTDNIIKFDHVP 446
TAR+T+L++VL+DLN+GRYERTMV+ +GA++S L PG G++I D++IKFD VP
Sbjct: 696 TARVTDLIKVLEDLNNGRYERTMVTSNGPRGDGAESSMKLKPGNGQLIFKDHVIKFDKVP 517
Query: 447 LATPNGDILIQDLSFEVRSGANVLICGPNGCGKSSLFRVLGELWPLFGGRLTKPERGKLF 506
L TPNGD+LI +LSFEV++G NVL+CGPNGCGKSSLFR+LGELWPLFGG LTKPE+GKLF
Sbjct: 516 LVTPNGDVLIPELSFEVKAGMNVLVCGPNGCGKSSLFRILGELWPLFGGSLTKPEKGKLF 337
Query: 507 YVPQRPYMTLGTLRDQVIYPDGKEDQKKRGISDQVLKEYLDNVQLGHILEREGGWDSVQD 566
Y+PQRPYMT+GTLRDQV YPD E+Q ++G D+ L + L VQL ++L+REGGWD+VQD
Sbjct: 336 YIPQRPYMTVGTLRDQVTYPDSHEEQLRKGTRDEELADILGKVQLDYVLQREGGWDAVQD 157
Query: 567 WMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGI 618
WMDVLSGGEKQR+AMARLFYHKPQFAILDECTSAVSVDVE ++Y + R+VGI
Sbjct: 156 WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGFMYQYSREVGI 1
>19618
Length = 974
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 115/138 (83%)
Frame = +2
Query: 522 QVIYPDGKEDQKKRGISDQVLKEYLDNVQLGHILEREGGWDSVQDWMDVLSGGEKQRMAM 581
Q+IYP ++D ++ G SD+ L +LD VQL ++ +RE G D+++DW+DVLSGGEKQR+AM
Sbjct: 50 QIIYPHTRDDMRRLGKSDEDLLHFLDIVQLTYLEQREHGLDAIEDWIDVLSGGEKQRIAM 229
Query: 582 ARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDG 641
ARLFYHKPQFAILDECTSAVSVDVE +YS+CR+VGITLFTVSHRKSLW HH+YYL DG
Sbjct: 230 ARLFYHKPQFAILDECTSAVSVDVEGKMYSYCREVGITLFTVSHRKSLWVHHDYYLQFDG 409
Query: 642 RGNYEFKKITEDTVEFGS 659
RG+YEF+ I +D FGS
Sbjct: 410 RGSYEFEAIDQDKEHFGS 463
>19777
Length = 671
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 6/223 (2%)
Frame = -1
Query: 432 EIINTDNIIKFDHVPLATP-NGDILIQDLSFEVRSGANVLICGPNGCGKSSLFRVLGELW 490
E+ +T+ + V P + +L +DLS ++ SG ++L+ G +GCGK+SL RV+ LW
Sbjct: 662 EMRSTEPAFSIESVTYGPPKSSHVLCRDLSLKLHSGTSILVTGDSGCGKTSLLRVIAGLW 483
Query: 491 PLFGG---RLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDGKEDQKKRGISDQVLKEYLD 547
G R+ + +L Y+PQ+PY+T G+LRDQ+++P + D D + YL
Sbjct: 482 KSSTGYVDRIVEQIPSELLYLPQKPYLTTGSLRDQILFPSTEADVVP---DDDKMYRYLS 312
Query: 548 NVQLGHILEREGGWDSVQDW--MDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDV 605
L +LER GG D DW D S GE QR++ R F+HKP+FA+LDE TS VS ++
Sbjct: 311 LAGLNQLLERLGGLDVNMDWNWYDEXSPGEMQRLSFVRXFFHKPRFALLDEATSQVSQEM 132
Query: 606 EDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFK 648
E +Y C+K+ ITL ++ HR S+ +H LH G G++ +
Sbjct: 131 EGTLYLQCQKLHITLLSIGHRDSIRPYHPLSLHFHGSGSWSTR 3
>05764
Length = 1395
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Frame = -2
Query: 455 LIQDLSFEVRSGANVLICGPNGCGKSSLFRVLGELWPLFGGRL-----------TKPERG 503
+++ +S E+ +G + G +GCGKS++ +L + GRL R
Sbjct: 1082 VLKGISLEISAGQTAALVGISGCGKSTIISLLQRYYDPSKGRLLVDGTDVRDYNITALRS 903
Query: 504 KLFYVPQRPYMTLGTLRDQVIYPDGKEDQKKRGISDQVLKEYLDNVQLGHILE----REG 559
L V Q P + ++RD + Y G E SD + + + + +I E
Sbjct: 902 LLSVVSQEPILFDCSIRDNIQY--GLE-------SDVPMPDIIAACKTANIHEFIASLPQ 750
Query: 560 GWDS-VQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKV-- 616
G+D+ V LSGG+KQR+A+AR P +LDE TSA+ + E + +
Sbjct: 749 GYDTQVGGKGTQLSGGQKQRVAIARALVRNPIILLLDEATSALDTESEKLVQAALDNARE 570
Query: 617 GITLFTVSHRKSLWKHHEYYLHMDG-----RGNYE 646
G T ++HR S ++ + M+ +GN++
Sbjct: 569 GRTCIVIAHRLSTIQNADVIFVMENGQILEKGNHQ 465
>01623
Length = 1414
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Frame = +3
Query: 440 IKFDHVPLATPN-GDILI-QDLSFEVRSGANVLICGPNGCGKSSLFRVLGELWPLFGGRL 497
I+F + A P D+ I + + + R+G + GP+G GKS++ +L + G++
Sbjct: 27 IEFRDIHFAYPGRPDVAIFKGFNLQARAGQVTAVVGPSGSGKSTVCGLLLRYYDPNAGQV 206
Query: 498 T---------KPE--RGKLFYVPQRPYMTLGTLRDQVIYPDGKEDQKKRG-ISDQVLKEY 545
P R + V Q P + ++ + + Y D G I D K
Sbjct: 207 MLDGQNIAELDPTWLRSHIGTVSQEPILFSCSVAENIAYGAVNPDAVTLGQIEDAARKAN 386
Query: 546 LDNVQLGHILEREGGWDS-VQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVD 604
N L G D+ V + +LSGG++QR+A+AR P+ +LDE TSA+ +
Sbjct: 387 AFNFVSTFPL----GLDTMVGERGMMLSGGQRQRIAIARAILKNPEILLLDEATSALDAE 554
Query: 605 VEDYIYSHCRKV--GITLFTVSHRKSLWK 631
E + K+ G T+ T++HR S K
Sbjct: 555 SEYLVQDALEKLMGGRTVITIAHRLSTIK 641
>02301
Length = 1098
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = -2
Query: 504 KLFYVPQRPYMTLGTLRDQVIYPDGKEDQKKRGISDQVLKEYLDNVQLGHILEREGGWD- 562
K+ V Q P + +++D + Y G E I +K + I G+D
Sbjct: 872 KMALVGQEPVLFSRSIKDNIGY--GPEQYNDSDIVTAAMKANAHDF----IRALPRGYDT 711
Query: 563 SVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYS---HCRKVGIT 619
SV + +LSGG+KQR+A+AR +P +LDE TSA+ E + S C + G T
Sbjct: 710 SVGERGLLLSGGQKQRLAIARALVRQPAILLLDEATSALDTQSESLVQSAINECTR-GRT 534
Query: 620 LFTVSHR 626
+ ++HR
Sbjct: 533 VVIIAHR 513
>30281
Length = 821
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Frame = -2
Query: 503 GKLFYVPQRPYMTLGTLRDQVIYPDGKEDQKKRGISDQVLKE----YLDNVQLGHILERE 558
G++ YVPQ+ ++ T+RD +++ K + I +Q E L L I E+
Sbjct: 820 GRIAYVPQQAWIQNATVRDNILFGSPYIRSKYKAILEQCELERDVAMLPGGDLTQIGEK- 644
Query: 559 GGWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGI 618
G + LSGG+KQR+++AR Y +LD+ SAV V I+S + +G
Sbjct: 643 -GIN--------LSGGQKQRVSVARAVYSDSDVYLLDDPLSAVDSHVGKAIFS--KVIGP 497
Query: 619 TLFTVSHRKSLWKHHEYYLH--------MDG----RGNYE 646
+ L H ++L MDG RG+YE
Sbjct: 496 NGLLRGTTRVLVTHGVHWLPMVDEILVLMDGKISERGSYE 377
>22801
Length = 753
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = -1
Query: 571 LSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLW 630
LSGG++ R+A+A L P +LDE T+ + ++ D + + + VSH + L
Sbjct: 732 LSGGQRARVALAELSCRAPDVLVLDEPTNNLDIESIDALADAIKNFTGGVIIVSHDERLI 553
Query: 631 KHHEYYL 637
+ L
Sbjct: 552 RDTNCQL 532
>03538
Length = 1974
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -1
Query: 571 LSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLW 630
LSGG++ R+A+A L P +LDE T+ + ++ D + + + VSH + L
Sbjct: 1725 LSGGQRARVALAELSCRAPDVLVLDEPTNNLDIESIDALADAIKNFTGGVIIVSHDERLI 1546
Query: 631 K 631
+
Sbjct: 1545 R 1543
>01839
Length = 2346
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +2
Query: 103 MIQNGTLIESGIIGRSSKDFKRYLFNFIAAMPLISLVNNFLKYGLNELKLC----FRVRL 158
+I L+ S I SS +LF + ++L+NN+L + LC F V L
Sbjct: 1118 LISFSVLVFSFIHTASSPA-NLFLFVLFVCLFFLTLLNNYLDFNCMLFHLCTANIFLVNL 1294
Query: 159 TRYLYEEYLQA 169
T Y + +LQA
Sbjct: 1295 TDYFFRIFLQA 1327
>38795
Length = 792
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 455 LIQDLSFEVRSGANVLICGPNGCGKSSLFRVL-GEL 489
+ Q+L F + V + GPNG GKS+L +++ GEL
Sbjct: 682 IYQNLDFGIDLDTRVALVGPNGAGKSTLLKLISGEL 789
>33929
Length = 408
Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 451 NGDILIQDLSFEVRSGANVLICGPNGCGKSSLFRVLG 487
+G L+ D E+ G + G NGCGKSSL L
Sbjct: 232 HGAELLMDSKLEMNVGKRYGLIGLNGCGKSSLLAALA 342
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|34328138|ref|NP_032469.2| kinesin family member 3A
[Mus musculus]
(701 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
33215 354 5e-98
12048 179 4e-55
34477 186 2e-47
38050 80 2e-42
02896 135 4e-32
28434 133 3e-31
13148 124 2e-28
11818 119 4e-27
15043 108 6e-24
14618 95 7e-20
34899 83 8e-17
17748 65 4e-16
36593 52 6e-07
38061 36 0.042
36649 29 6.0
>33215
Length = 696
Score = 354 bits (909), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 164/216 (75%), Positives = 193/216 (89%)
Frame = +1
Query: 149 YLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSV 208
YLEIY EE+RDLL KDQ++RLE+K RPD GVY+KDLS++V + +++ +M +G++NRSV
Sbjct: 1 YLEIYQEEIRDLLSKDQSKRLELKXRPDTGVYVKDLSSFVTKSVREIEHVMNVGNQNRSV 180
Query: 209 GATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLK 268
GATNMNEHSSRSHAIF IT+ECSE G DG H+R+GKL++VDLAGSERQAKTGATG RLK
Sbjct: 181 GATNMNEHSSRSHAIFIITVECSEIGADGENHIRVGKLNMVDLAGSERQAKTGATGDRLK 360
Query: 269 EATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYN 328
EATKINLSLS L NVISALVD K+TH+PYR+SKLTRLLQDSLGGNSKT M ANIGPA YN
Sbjct: 361 EATKINLSLSALSNVISALVDAKTTHIPYRDSKLTRLLQDSLGGNSKTTMVANIGPASYN 540
Query: 329 YDETISTLRYANRAKNIKNKARINEDPKDALLRQFQ 364
+DET++TLRYANRAK+IKNK +INEDPKDALLR+FQ
Sbjct: 541 FDETLTTLRYANRAKSIKNKPKINEDPKDALLREFQ 648
>12048
Length = 1162
Score = 179 bits (453), Expect(2) = 4e-55, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 144/252 (57%), Gaps = 7/252 (2%)
Frame = +2
Query: 103 GTGKTFTMEGVRAVPGLRGVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLG 162
G GKTFT+ G RG+IP S ++I+ K + F V +SYLEIYN+ DLL
Sbjct: 410 GGGKTFTITGGAERYMDRGLIPRSLSYIYEQTEK-NPELSFTVHISYLEIYNDSGYDLLD 586
Query: 163 -KDQTQRLE------VKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNE 215
K + +LE + E D +++++LS + N+ ++ ++ LG NR + T MN+
Sbjct: 587 PKHEAAKLEDLPKVNLLEDSDQNIHLRNLSVHQANSEEEALNLLFLGDTNRMIAETPMNQ 766
Query: 216 HSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINL 275
SSRSH IFTI I E G + +R K HLVDLAGSER AKT GQ L EA IN
Sbjct: 767 ASSRSHCIFTIHITTRETG---SATIRRAKYHLVDLAGSERVAKTNVNGQLLTEARYINS 937
Query: 276 SLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETIST 335
SL L VI AL + HVPYRNS +T +L+DSLGGN T M A N DE+IST
Sbjct: 938 SLHFLELVIIALSEKSRQHVPYRNSMMTSVLRDSLGGNCMTTMIATCSMEKRNMDESIST 1117
Query: 336 LRYANRAKNIKN 347
R+A R IKN
Sbjct: 1118CRFAQRVAMIKN 1153
Score = 55.1 bits (131), Expect(2) = 4e-55, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 32/38 (84%)
Frame = +1
Query: 66 VFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTG 103
+F P++ Q +V+ A+P+ID+VL+GYNGT+FAYGQTG
Sbjct: 298 MF*PKTNQDEVFQNVAKPVIDNVLQGYNGTVFAYGQTG 411
>34477
Length = 811
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/133 (72%), Positives = 107/133 (80%), Gaps = 1/133 (0%)
Frame = +3
Query: 233 KGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKS 292
+G DG HVR+GKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVIS + G+
Sbjct: 162 EGGDGEQHVRVGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVIS-VPGGRQ 338
Query: 293 THV-PYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARI 351
H P + + G +T+M AN+GPADYNYDETISTLRYANRAKNIKNKA+I
Sbjct: 339 EHTHPLQELQAHSPAAGLPGRQLQTVMVANMGPADYNYDETISTLRYANRAKNIKNKAKI 518
Query: 352 NEDPKDALLRQFQ 364
NEDPKDALLRQFQ
Sbjct: 519 NEDPKDALLRQFQ 557
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 93/137 (67%)
Frame = +1
Query: 179 VYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGN 238
VY+KDLSA+VVNNADDMDRIMTLG+KNRSVG+TNMN HSSRSHAIFT+T+ECSEKG G+
Sbjct: 1 VYVKDLSAFVVNNADDMDRIMTLGNKNRSVGSTNMNMHSSRSHAIFTVTVECSEKGATGS 180
Query: 239 MHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYR 298
G + + ++ + +LVDGKSTH+PYR
Sbjct: 181 SMYVWANCTWWTWXGQRDKPRQEPQASA*RKRPRSTCLCQLWAM*YRSLVDGKSTHIPYR 360
Query: 299 NSKLTRLLQDSLGGNSK 315
NSKLTRLLQDSLGGNSK
Sbjct: 361 NSKLTRLLQDSLGGNSK 411
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 421 MVEMQAKIDEERKALETKLDMEEEERNKAR 450
M E+QAKID +R+ LE+K DM EEERNK +
Sbjct: 714 MAEIQAKIDSDRRVLESKKDMAEEERNKVK 803
>38050
Length = 809
Score = 79.7 bits (195), Expect(3) = 2e-42, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = -3
Query: 311 GGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQ 364
G NSKT+M A + PAD NY+ET+STLRYA+RAK IK KA +NEDP D L+R+ Q
Sbjct: 300 GWNSKTIMVAALSPADINYEETLSTLRYADRAKQIKTKAMVNEDPTDKLIRELQ 139
Score = 70.9 bits (172), Expect(3) = 2e-42, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 53/96 (55%)
Frame = -2
Query: 169 LEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITI 228
L +++ P G Y L V + +D+++ M G NR+V ATNMN SSR+H I IT
Sbjct: 733 LRIRQHPKNGFYADGLQVVPVVSYEDIEKKMEAGTTNRTVAATNMNATSSRAHTIVGITF 554
Query: 229 ECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATG 264
K G + ++LVDLAGSER TGATG
Sbjct: 553 MQKFKNAAGEETTKSALINLVDLAGSERADSTGATG 446
Score = 62.0 bits (149), Expect(3) = 2e-42, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = -1
Query: 264 GQRLKEATKINLSLSTLGNVISALVD---GKSTHVPYRNSKLTRLLQDSLGGNSK 315
G RLKE IN SLS LGN ISAL D GK+ VP+R+S LT+LL+++LGG ++
Sbjct: 449 GDRLKEGAAINQSLSCLGNCISALADKAGGKNVKVPFRDSALTKLLKNALGGTAR 285
>02896
Length = 2076
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 110/182 (60%)
Frame = +1
Query: 179 VYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGN 238
++ + L++++ N ++ ++ G NRS+ A ++N SSRSH IFT+ +E S V +
Sbjct: 10 LWSRGLASHLAQNEEEALNLLFEGETNRSIAAHSLNRMSSRSHCIFTVYLE-SRSRVQSS 186
Query: 239 MHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYR 298
+ KL+ VDLAGSER K+ + G+ + EA IN SLS L V+ AL D H+P+R
Sbjct: 187 AKYTVSKLNFVDLAGSERIGKSKSEGKMVTEAMYINKSLSFLEQVVIALADKNRDHIPFR 366
Query: 299 NSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDA 358
SKLT L+DS+GGN T++ AN+ +ET+STLR+A R + N+ INE A
Sbjct: 367 QSKLTHYLKDSIGGNCNTVLIANVWGERAQLEETVSTLRFATRMMCVANEPAINEVYDPA 546
Query: 359 LL 360
LL
Sbjct: 547 LL 552
>28434
Length = 777
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 85/118 (72%), Gaps = 3/118 (2%)
Frame = +2
Query: 250 DLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDG--KSTHVPYRNSKLTRLLQ 307
DLAGSER +T A G R KE IN L LGNVISAL + K H+PYR+SKLTRLLQ
Sbjct: 62 DLAGSERAKRTRAEGDRFKEGVNINRGLLALGNVISALGEDVQKRGHIPYRDSKLTRLLQ 241
Query: 308 DSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPK-DALLRQFQ 364
DSLGGNS T+M A + PAD N +ET++TLRYA+RA+ IKNK IN DP+ D +LR Q
Sbjct: 242 DSLGGNSHTLMVACVSPADSNMEETLNTLRYADRARKIKNKPVINRDPQSDEILRLRQ 415
>13148
Length = 653
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 103/180 (57%)
Frame = -3
Query: 97 FAYGQTGTGKTFTMEGVRAVPGLRGVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEE 156
F KT TMEGV L+G+IP IF +I + + F ++VSY EIY ++
Sbjct: 528 FCLWSNVQWKTHTMEGVLGNESLQGIIPRIVQDIFNYIYGMDENLEFHIKVSYFEIYMDK 349
Query: 157 VRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEH 216
+RDLL +T L V E + Y+K + V++ +++ ++ G NR V TNMNEH
Sbjct: 348 IRDLLDVTKTN-LSVHEDKNRVPYVKGCTERFVSSPEEVMEVVDEGKSNRHVAVTNMNEH 172
Query: 217 SSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLS 276
SSRSH++F I ++ + +H GKL+LVDLAGSE+ +KTGA G L EA IN S
Sbjct: 171 SSRSHSVFLIHVKQENVDSEKKLH---GKLYLVDLAGSEKVSKTGAEGAVLDEAKNINRS 1
Score = 65.1 bits (157), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = -1
Query: 59 KTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGK 106
K F FD V P Q VY +TA+PI+ VL GYNGTIFAYGQT +GK
Sbjct: 641 KVFMFDKVLKPNVTQEYVYTVTAKPIVADVLSGYNGTIFAYGQTSSGK 498
>11818
Length = 657
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 104/184 (56%), Gaps = 6/184 (3%)
Frame = -1
Query: 104 TGKTFTMEGVRAVP-----GLRGVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVR 158
+GKT+TM G L G+IP +F IA+ D F V VSYLEIYNE++
Sbjct: 657 SGKTYTMGGCYDAALSHDDDLVGIIPRILGDLFNGIAE-RSDYTFKVTVSYLEIYNEDLL 481
Query: 159 DLLG-KDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHS 217
DLL Q Q L ++E + + IK L V + +D ++ G ++R+ GAT MN+ S
Sbjct: 480 DLLCLPSQRQPLSIREEMNGEIKIKGLKEVEVGSLEDTLMCLSQGARSRTTGATAMNDTS 301
Query: 218 SRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSL 277
SRSHAIFT+ IE S+K D N H + K HLVDLAGSER KT A G R KE I ++
Sbjct: 300 SRSHAIFTVHIEKSKK-EDMNDHC-IAKFHLVDLAGSERAKKTRAEGDRFKEGVNITVAC 127
Query: 278 STLG 281
G
Sbjct: 126 LPWG 115
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = -3
Query: 264 GQRLKEATKINLSLSTLGNVISALVDG--KSTHVPYRNSKLTRLLQDSLGGNSKTM 317
G++++ K L LGNVISAL + K H+PYR+SKLTRLLQDSLGGNS T+
Sbjct: 169 GRQIQRRCKHYRGLLALGNVISALGEDVQKRGHIPYRDSKLTRLLQDSLGGNSHTL 2
>15043
Length = 973
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 90/162 (55%), Gaps = 9/162 (5%)
Frame = +2
Query: 202 GHKNRSVGATNMNEHSSRSHAIFTITIECSEK-----GVDGNMHVRMGKLHLVDLAGSER 256
G + R +GAT++ H +R+HA+FTIT+E E+ GV N + LV+LAG E
Sbjct: 26 GRRARRMGATDIKAHRARAHAVFTITVEQKERQSSKVGVRAN-------IMLVELAGCE- 181
Query: 257 QAKTGATGQRLKEATKINLSLSTLG--NVISALVDGKST--HVPYRNSKLTRLLQDSLGG 312
+AT + T G NV+ AL D K HVPYR S +TRLLQD+LGG
Sbjct: 182 ----------AADATDPKILAGTQGVVNVLKALGDSKQIGGHVPYRESLVTRLLQDTLGG 331
Query: 313 NSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINED 354
N+ T+M + P D +Y T S L+Y AK +KN AR+N D
Sbjct: 332 NAMTLMLVTVSPLDKSYQTTQSALQYGQFAKTVKNHARMNLD 457
>14618
Length = 724
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 97/163 (59%), Gaps = 6/163 (3%)
Frame = -2
Query: 61 FTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTME-GVRAVPGL 119
F+FD VF P++ Q DV+ ++ ++ S L+GYN IFAYGQTG+GKT+TME G+
Sbjct: 483 FSFDRVFHPDNTQQDVFEEISQ-LVQSALDGYNVCIFAYGQTGSGKTYTMEGGLVGDEDT 307
Query: 120 RGVIPNSFAHIFGHIAKAEGDT--RFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKER--- 174
+G+IP + + IF A+ D ++ S++EIYNE + DLL ++ + ++ + R
Sbjct: 306 KGMIPRAVSQIFS-TARELQDKGWQYKFTTSFVEIYNEMIGDLLSSNKXKNVKHEIRMAG 130
Query: 175 PDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHS 217
D V + +L+ V + ++ +++ +NR+V AT NE S
Sbjct: 129 RDNNVAVTNLTTVDVTSQHEIAKLLRQASENRAVAATKCNERS 1
>34899
Length = 564
Score = 83.2 bits (204), Expect(2) = 8e-17, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%)
Frame = +3
Query: 62 TFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLRG 121
+ D +GP++K +Y ++ LEGYN TI A+G TG+GK+F M G G
Sbjct: 3 SLDGAYGPDAKNGQIYQEKCDSMVQRALEGYNVTIMAFGATGSGKSFLMNGNDQEI---G 173
Query: 122 VIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYI 181
V P +F H+ + + +V S++EI +E++ DLL + + V++ G+++
Sbjct: 174 VAPMVIQQLFQHL-RQRSNKESMVTASFVEILDEKMTDLL-NPHNRPMAVRQHVIKGIFV 347
Query: 182 KDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHA 222
LS V +++ ++ G + R +GAT++ H +R A
Sbjct: 348 DGLSEMVARTGEELSQLYEQGRRARRMGATDIKAHRARYDA 470
Score = 22.3 bits (46), Expect(2) = 8e-17, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 218 SRSHAIFTITIECSEK 233
+++HA+FTIT+E E+
Sbjct: 517 TKAHAVFTITVEQKER 564
>17748
Length = 621
Score = 64.7 bits (156), Expect(2) = 4e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Frame = -3
Query: 87 SVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLR------GVIPNSFAHIFGHIAKAEGD 140
++ +GYN T+ AYGQTG+GKTF+M G L+ G+IP +F I + D
Sbjct: 379 ALFKGYNATVLAYGQTGSGKTFSMGGCYEAS-LKLDEEAMGIIPRIIKDLFNGI-QERPD 206
Query: 141 TRFLVRVSYLEIYNEEVRDLLGK-DQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIM 199
F V VSYLEIYNEE+ BLL Q Q L ++E + + IK L V + DD +
Sbjct: 205 HTFKVTVSYLEIYNEELLBLLCPLSQRQPLTIREELNGEIKIKGLKEVTVGSVDDTLDCL 26
Query: 200 TLGHKNRS 207
+ G + R+
Sbjct: 25 SQGAQLRT 2
Score = 38.9 bits (89), Expect(2) = 4e-16, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = -2
Query: 15 VKVVVRCRPLNEREKSMCYRQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQL 74
V+V +R RPL +E+S + + + + + + K K FTFD VF P+ Q
Sbjct: 575 VRVALRARPLIAKEESEGCQTCLWYNSSQPQVVLGKD-------KPFTFDYVFSPKHNQQ 417
Query: 75 DVYNLTARPIIDSVL 89
DVY +A+ ++ S
Sbjct: 416 DVYEKSAQTLVTSTF 372
>36593
Length = 466
Score = 52.4 bits (124), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +1
Query: 301 KLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANR 341
KLT LLQ+SLGGNSKT+M N+ P + N+ ET+++LR+A +
Sbjct: 1 KLTYLLQNSLGGNSKTLMFVNVSPKEENFSETLNSLRFATK 123
>38061
Length = 206
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = -3
Query: 318 MCANIGPADYNYDETISTLRYANRAKNI 345
+ A + PAD N +ET++TLRYA+RA+ I
Sbjct: 84 LVACVSPADSNMEETLNTLRYADRARKI 1
>36649
Length = 712
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 66 VFGPESKQLDVYNLTARPI-IDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLRGVI 123
F E +Q Y LT +P+ + S + + GTIF GTG F + G P G +
Sbjct: 596 TFSVEPQQTKQYELTYKPVTMTSENKKHQGTIFFPLPDGTGLLFNLVGTAEPPKPNGKV 420
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|21704096|ref|NP_663531.1| TAR DNA binding protein
isoform 1 [Mus musculus]
(414 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12350 353 7e-98
21869 95 5e-20
03406 93 2e-19
19868 86 3e-17
03000 84 9e-17
31618 67 2e-14
11019 68 6e-12
26197 62 5e-10
32386 58 9e-09
16016 56 3e-08
23322 54 8e-08
02415 51 1e-06
24983 50 2e-06
33516 49 5e-06
25691 47 1e-05
00302 44 1e-04
30672 43 3e-04
35180 43 3e-04
01937 42 4e-04
23250 41 7e-04
20488 41 0.001
05273 40 0.001
14637 40 0.002
20169 40 0.002
23720 39 0.003
04988 39 0.003
03744 39 0.004
00817 39 0.005
17681 39 0.005
11126 38 0.007
02343 38 0.007
15371 38 0.010
17775 37 0.015
11108 36 0.025
02809 36 0.025
13822 35 0.062
00029 35 0.064
02064 34 0.086
00556 34 0.092
28605 34 0.11
09968 33 0.16
02347 33 0.16
16427 33 0.29
08958 32 0.52
23655 32 0.56
14258 32 0.62
09736 30 1.7
19556 30 1.9
12506 29 3.1
25950 29 3.9
33504 29 4.2
19246 28 7.6
>12350
Length = 975
Score = 353 bits (906), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 169/266 (63%), Positives = 211/266 (79%), Gaps = 1/266 (0%)
Frame = -2
Query: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI 60
M++YIR D+ DE +E+P E+DGT+LLST++AQFPG+CGL+YRNP S MRG+RL +G
Sbjct: 917 MNKYIRAVADDGDEALELPIEEDGTILLSTLSAQFPGSCGLKYRNPDSGTMRGIRLSDGR 738
Query: 61 LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAV-QKTSDLIVLGLPWKTTEQD 119
L+ PD WG V+V +PK+ K +D VK + QK SDLIVLGLPWK+TE D
Sbjct: 737 LYPPDNHWGKQVFVCVFPKEGK-----SDHPGPKVVKSSSRQKCSDLIVLGLPWKSTEDD 573
Query: 120 LKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPN 179
L+ YFS FG++LMVQVKKD KTG SKGFGF+RF EYE+Q+K M+QRHMIDGRWCD ++PN
Sbjct: 572 LRSYFSQFGDLLMVQVKKDPKTGQSKGFGFIRFAEYESQLKCMAQRHMIDGRWCDVRIPN 393
Query: 180 SKQSPDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKV 239
SK+ + L +RK+FVGRCT+DMTA++L+QFF ++GEVVDVFIP+PFRAFAFV+FAD +V
Sbjct: 392 SKEGAQQ-LMNRKIFVGRCTDDMTADDLRQFFSKFGEVVDVFIPRPFRAFAFVSFADPEV 216
Query: 240 AQSLCGEDLIIKGISVHISNAEPKHN 265
AQSL GED IIKG SVHIS A PK N
Sbjct: 215 AQSLYGEDHIIKGASVHISGAAPKPN 138
>21869
Length = 503
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 79/134 (58%), Gaps = 3/134 (2%)
Frame = -2
Query: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI 60
M+++I+V E+ D+P+EIPSE DGT+LL+T+ AQ+PGACGL+Y++ RG+RL EG+
Sbjct: 400 MAQFIQVCEEIGDDPVEIPSEGDGTLLLTTLNAQYPGACGLKYKSETG-AYRGIRLAEGV 224
Query: 61 LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDL---IVLGLPWKTTE 117
L+ PD WG+ ++ +PK + E A A +R ++ + G P +
Sbjct: 223 LYPPDGHWGSHQFIAVFPKQIQPSAKERMALVARPPRRGWWTPTNARISLSWGCPGRAQR 44
Query: 118 QDLKDYFSTFGEVL 131
+ +FG+++
Sbjct: 43 TTSRPTSVSFGDLV 2
>03406
Length = 1292
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Frame = +3
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYET-QVKVMSQ 164
+ V GL W+T + L++YF FGEV +K DL +G S+GFGFV F E T V ++
Sbjct: 246 IFVGGLSWETXSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKEAATVDAVVKNK 425
Query: 165 RHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIP- 223
H + GR D K N ++ RK+FVG+ + E+++ +F ++G+VV+V +P
Sbjct: 426 EHKLQGRKIDPKPANPRKG------MRKIFVGKLDPGVPQEDVESYFAKFGKVVNVELPY 587
Query: 224 ----KPFRAFAFVTFADDK-VAQSLCGEDLIIKGISVHISNAEP 262
RAF FV F +DK V + L I G V + A P
Sbjct: 588 DKVKDQRRAFCFVEFDNDKTVKKVLEQTSHKIGGQEVDVKKATP 719
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPF-----RAFAFVTFAD 236
RK+FVG + + ++ L+++F ++GEV + R F FV F +
Sbjct: 240 RKIFVGGLSWETXSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKE 392
>19868
Length = 434
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Frame = +2
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ- 164
+ V GL W+T+ + L+DYF+ FGE+ V V KD T S+GFGF+ F + + KV++Q
Sbjct: 5 MFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQA 184
Query: 165 RHMIDGRWCDCKLPNSKQS-PDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFI- 222
H +DG+ D K+ +++ P R++K+FVG + T E+++ +F Q+G + D +
Sbjct: 185 THELDGKKIDPKVAFPRRAHPRMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLM 364
Query: 223 ----PKPFRAFAFVTFA 235
R F FVT +
Sbjct: 365 FDKQTNRHRGFGFVTIS 415
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +2
Query: 98 RAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
R V +T + V GL TT +D+K+YF FG + + D +T +GFGFV
Sbjct: 248 RMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFV 406
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +2
Query: 192 KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFAD----DKVAQS 242
K+FVG + + E L+ +F ++GE+ +V + K R F F+TF D DKV
Sbjct: 2 KMFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAQ 181
Query: 243 LCGEDLIIKGISVHISNAEPKHNSNRQLER 272
E + G + A P+ R + R
Sbjct: 182 ATHE---LDGKKIDPKVAFPRRAHPRMVTR 262
>03000
Length = 778
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Frame = +3
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR 165
L + GL ++T E L+ +F T+GE++ V +D + S+GFGF+ + + E+ + + R
Sbjct: 93 LFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQAQANR 272
Query: 166 -HMIDGRWCDCK--LPNSKQSPDEPLRS-RKVFVGRCTEDMTAEELQQFFCQYGEV--VD 219
H IDGR D K +P + E +S +K+FVG ED T + ++ F ++GE+ VD
Sbjct: 273 PHKIDGREVDTKRAMPREESGRSEVQQSVKKMFVGGVKEDTTEDMIRDTFNEFGEITGVD 452
Query: 220 VFIPK---PFRAFAFVTFAD-DKVAQSLCGEDLIIKGISVHISNAEPKHN 265
+ K R F FVTF D D V +++ + + G V + A+ K++
Sbjct: 453 LIQDKGTGKNRGFCFVTFGDHDSVDKAVLKKRHDLNGRQVEVKKAQSKND 602
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +3
Query: 80 DNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDL 139
D KR M + S +V+++V+K + V G+ TTE ++D F+ FGE+ V + +D
Sbjct: 300 DTKRAM-PREESGRSEVQQSVKK---MFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDK 467
Query: 140 KTGHSKGFGFVRFTEYETQVK-VMSQRHMIDGRWCDCKLPNSK 181
TG ++GF FV F ++++ K V+ +RH ++GR + K SK
Sbjct: 468 GTGKNRGFCFVTFGDHDSVDKAVLKKRHDLNGRQVEVKKAQSK 596
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +3
Query: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFI-----PKPFRAFAFVTFAD-DKVAQSLC 244
RK+F+G + + + L+ F +GE+VD + K R F F+T+ D + + Q+
Sbjct: 87 RKLFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQAQA 266
Query: 245 GEDLIIKGISVHISNAEPKHNSNR 268
I G V A P+ S R
Sbjct: 267 NRPHKIDGREVDTKRAMPREESGR 338
>31618
Length = 716
Score = 66.6 bits (161), Expect(2) = 2e-14, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 99 AVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQ 158
+V T L V GL W+TTE++L+D+F +GE+ + VK D +TG S+GF F+ FT E
Sbjct: 277 SVMMTEKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAI 456
Query: 159 VKV-MSQRHMIDGRWCDCK 176
+V ++ H+I+ + D K
Sbjct: 457 DQVSAAEEHIINSKKVDPK 513
Score = 30.4 bits (67), Expect(2) = 2e-14, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 189 RSRKVFVGRCTEDMTAEELQQFFCQYGE 216
R K+FVG T +++ EE++ +F Q+G+
Sbjct: 528 RHGKIFVGGLTTEISDEEIKTYFSQFGQ 611
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Frame = +1
Query: 162 MSQRHMIDGRWCDCKLPNSKQSPD--------EPLR------SRKVFVGRCTEDMTAEEL 207
+S R + W K+ N P +PLR + K+FVG + + T +EL
Sbjct: 163 ISLRMLPPTTWRTLKMENRLPLPALQMAAQKMQPLRVTSVMMTEKLFVGGLSWETTEKEL 342
Query: 208 QQFFCQYGEVVDVFI---PKPFRA--FAFVTFAD-DKVAQSLCGEDLIIKGISV 255
+ F +YGE+ + + P+ R+ FAF+ F + + + Q E+ II V
Sbjct: 343 RDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSAAEEHIINSKKV 504
>11019
Length = 552
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Frame = -1
Query: 110 GLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMI 168
GL W+TT + L+ YF FGE+ V KD + S+GFGFV + + V++ H I
Sbjct: 546 GLSWQTTTETLRSYFEKFGEIKESMVMKDPTSKRSRGFGFVTYKDPSNVDNVLANGPHCI 367
Query: 169 DGRWCDCK-----------LPN-----------SKQSPDEPLRSRKVFVGRCTEDMTAEE 206
D + + LP K +P +++K+FVG + T E+
Sbjct: 366 DSKTLNFSNMTTFYSNQDLLPYPPQVDPKVAFPRKSNPRMVTKTKKIFVGGLSSSTTVED 187
Query: 207 LQQFFCQYGEVVDVF-----IPKPFRAFAFVTFADDKVAQSLC 244
++ +F YG + + + R FAFVTF ++ +C
Sbjct: 186 IKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTFDNESTVDKVC 58
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = -1
Query: 98 RAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYET 157
R V KT + V GL TT +D+K+YF +G + + D T +GF FV F T
Sbjct: 252 RMVTKTKKIFVGGLSSSTTVEDIKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTFDNEST 73
Query: 158 QVKVMS-QRHMIDGRWCDCK 176
KV H I+ + + K
Sbjct: 72 VDKVCEIHFHEINSKMVETK 13
>26197
Length = 1365
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = -2
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYET-QVKVMSQ 164
+ V GL W+T+ + L++YF FGEV +K DL +G S+GFGFV F E T V ++
Sbjct: 1292 IFVGGLSWETSSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKEAVTVDAVVKNK 1113
Query: 165 RHMIDGRWCDCKLPNSKQ 182
H + GR D K N ++
Sbjct: 1112 EHKLQGRKIDPKPANPRK 1059
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -3
Query: 110 GLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMI 168
G+P ++D++ YF+ FG+V+ V++ D + F FV F +T KV+ Q H I
Sbjct: 1021 GVP----QEDVESYFAKFGKVVNVELPYDKVKDQRRAFCFVEFDNDKTVKKVLEQTSHKI 854
Query: 169 DGR 171
G+
Sbjct: 853 GGQ 845
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = -2
Query: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPF-----RAFAFVTFAD 236
RK+FVG + + +++ L+++F ++GEV + R F FV F +
Sbjct: 1298 RKIFVGGLSWETSSKHLREYFEKFGEVTSCTLKTDLDSGKSRGFGFVVFKE 1146
>32386
Length = 674
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = +1
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR 165
L + GL ++T E L+ +F T+GE++ V +D + S+GFGF+ + + E+ + + R
Sbjct: 307 LFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQAQANR 486
Query: 166 -HMIDGRWCDCK--LPNSKQSPDEPLRS-RKVFVG 196
H IDGR D K +P + E +S +K+FVG
Sbjct: 487 PHKIDGREVDTKRAMPREESGRSEVQQSVKKMFVG 591
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFI-----PKPFRAFAFVTFAD-DKVAQSLC 244
RK+F+G + + + L+ F +GE+VD + K R F F+T+ D + + Q+
Sbjct: 301 RKLFIGGLSYETDEDSLRSHFETWGEIVDCIVMRDSNSKRSRGFGFITYKDAESIDQAQA 480
Query: 245 GEDLIIKGISVHISNAEPKHNSNR 268
I G V A P+ S R
Sbjct: 481 NRPHKIDGREVDTKRAMPREESGR 552
>16016
Length = 1364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = -2
Query: 100 VQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
++ + + G+ T E L+ YF +G++ V KD T S+ F F+ F E
Sbjct: 1321 AERNRKVFIGGMHPDTDESSLRSYFEKYGDIRECIVVKDPATKRSRCFSFITFGNAENVD 1142
Query: 160 KVMSQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQFF 211
+V R H IDGR + K ++ + +++K+FVG +D T E L++ F
Sbjct: 1141 EVQKDRPHTIDGRTVETKRAMPREDTENHHQTKKMFVGGLKDDTTEEMLRKEF 983
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = -2
Query: 189 RSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFI-----PKPFRAFAFVTFAD-DKVAQS 242
R+RKVF+G D L+ +F +YG++ + + K R F+F+TF + + V +
Sbjct: 1315 RNRKVFIGGMHPDTDESSLRSYFEKYGDIRECIVVKDPATKRSRCFSFITFGNAENVDEV 1136
Query: 243 LCGEDLIIKGISVHISNAEPKHNS 266
I G +V A P+ ++
Sbjct: 1135 QKDRPHTIDGRTVETKRAMPREDT 1064
>23322
Length = 471
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = -2
Query: 91 SSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
S +V+++V+K + V G+ TTE ++D F+ FGE+ V + +D TG ++GF FV
Sbjct: 440 SGRSEVQQSVKK---MFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFCFV 270
Query: 151 RFTEYETQVK-VMSQRHMIDGRWCDCKLPNSK 181
F ++++ K V+ +RH ++GR + K SK
Sbjct: 269 TFGDHDSVDKAVLKKRHDLNGRQVEVKKAQSK 174
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Frame = -2
Query: 177 LPNSKQSPDEPLRS-RKVFVGRCTEDMTAEELQQFFCQYGEV--VDVFIPK---PFRAFA 230
+P + E +S +K+FVG ED T + ++ F ++GE+ VD+ K R F
Sbjct: 455 MPREESGRSEVQQSVKKMFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFC 276
Query: 231 FVTFAD-DKVAQSLCGEDLIIKGISVHISNAEPKHN 265
FVTF D D V +++ + + G V + A+ K++
Sbjct: 275 FVTFGDHDSVDKAVLKKRHDLNGRQVEVKKAQSKND 168
>02415
Length = 2763
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = -1
Query: 104 SDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163
+ + V GLP+ TT+ L++YF FG++ V D +TG S+G+GFV + +
Sbjct: 1926 TKIFVGGLPYHTTDHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFVTMADRTGADRACK 1747
Query: 164 QRH-MIDGRWCDCKL 177
+ +IDGR + L
Sbjct: 1746 DPNPIIDGRKANVNL 1702
>24983
Length = 433
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -2
Query: 110 GLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRH-MI 168
GLP+ TT+ L++YF FG++ V D +TG S+G+GFV + + + +I
Sbjct: 297 GLPYHTTDHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFVTMADRTGADRACKDPNPII 118
Query: 169 DGRWCDCKL 177
DGR + L
Sbjct: 117 DGRKANVNL 91
>33516
Length = 449
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +1
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR 165
+ V GL W T + L+ YFS FGE+ V + +TG S+GFGFV F + T ++S +
Sbjct: 160 IFVGGLSWDTDQDSLQGYFSQFGEITDCIVMMNQQTGKSRGFGFVSFKDPSTVDVILSSK 339
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +1
Query: 179 NSKQSPDEPLRSR--KVFVGRCTEDMTAEELQQFFCQYGEVVDVFI-----PKPFRAFAF 231
NSK+ + R K+FVG + D + LQ +F Q+GE+ D + R F F
Sbjct: 112 NSKKQFNMGGREEPGKIFVGGLSWDTDQDSLQGYFSQFGEITDCIVMMNQQTGKSRGFGF 291
Query: 232 VTFAD 236
V+F D
Sbjct: 292 VSFKD 306
>25691
Length = 768
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = -2
Query: 102 KTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF---TEYETQ 158
K ++L + GLP T+ DL++ F+ G ++ ++ D TG SKG GF+RF E E
Sbjct: 266 KGANLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQRIEAERA 87
Query: 159 VKVMSQRHMIDG 170
++ ++ H+ DG
Sbjct: 86 IQKLNN-HIPDG 54
>00302
Length = 927
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -1
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYET--QVKVMS 163
L + GL T E+ L++ F +G + VQV D +TG S+GF FV F E + K
Sbjct: 459 LGIFGLSLYTQERGLREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHEAKDRC 280
Query: 164 QRHMIDGR 171
IDGR
Sbjct: 279 NGIEIDGR 256
>30672
Length = 877
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 97 KRAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTG-HSKGFGFVRFTEY 155
K+ + K LI+ L +K E D++ +F FG + V + LK G S+GF FV+FTE
Sbjct: 384 KQELGKRCRLIIRNLAFKCKEADIRSHFGKFGTISEVTI--PLKQGDRSRGFAFVQFTEV 557
Query: 156 ETQVKVMS 163
+ K +S
Sbjct: 558 KAAQKAIS 581
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%)
Frame = +3
Query: 101 QKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
+++ L V LP++T+ + L + F G + V + G +GFG+V+F+ E +K
Sbjct: 3 RQSKTLFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLEDAIK 182
Query: 161 VMSQRHMIDGRWCDCKLPNSKQS 183
GR ++K+S
Sbjct: 183 AKDTVTHCSGRKISLSFADTKKS 251
>35180
Length = 2181
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = -2
Query: 167 MIDGRWCDCK-LPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFI--- 222
M R C K LP++ + + + SR V+V ED+T + L +FF Q+G++ + +
Sbjct: 335 MTKIRRCPSKPLPDNTKERKDDINSRSVYVKGFPEDITLDTLMEFFEQHGKIDTILMRRN 156
Query: 223 --PKPFRAFAFVTFADDKVAQSLCGEDL 248
K F+ FVTF++ + G+D+
Sbjct: 155 RPDKNFKGSVFVTFSNKEEEDVFLGKDV 72
>01937
Length = 1320
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = -1
Query: 97 KRAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYE 156
K V KTS + V GL TT +D K+YF +G + + D T +GF FV F
Sbjct: 1236 KTMVTKTSKIFVGGLSSSTTVEDXKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTFDNES 1057
Query: 157 TQVKV 161
T KV
Sbjct: 1056 TVDKV 1042
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Frame = -1
Query: 144 SKGFGFVRFTEYETQVKVMSQR-HMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDM 202
++GFGFV + + V++ H ID + K + K+FVG +
Sbjct: 1320 TRGFGFVTYKDPSNVDNVLANGPHCIDSKTMVTK-------------TSKIFVGGLSSST 1180
Query: 203 TAEELQQFFCQYGEVVDVF-----IPKPFRAFAFVTFADDKVAQSLC 244
T E+ + +F YG + + + R FAFVTF ++ +C
Sbjct: 1179 TVEDXKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTFDNESTVDKVC 1039
>23250
Length = 1617
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = -1
Query: 81 NKRKMDETDASSAVKVKRAVQKTSD--LIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKK 137
NKR+ D + K K+A + SD ++ LG +P E +K +FS FG V +++ +
Sbjct: 1395 NKRRED------SQKNKKAKGRKSDRGVVYLGHIPAGFYEPQMKRFFSQFGRVTRLRLSR 1234
Query: 138 DLKTGHSKGFGFVRF 152
KTG SKG+ F+ F
Sbjct: 1233 STKTGGSKGYAFLEF 1189
>20488
Length = 3281
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +2
Query: 66 AGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKDYFS 125
AG LV ++P + A+SA K ++L + LP + +QDL F
Sbjct: 2597 AGLSGLVNQASFPNAFNPQAQMQQANSAGKHSEG-PDGANLFIYHLPQEFGDQDLMQMFM 2773
Query: 126 TFGEVLMVQVKKDLKTGHSKGFGFVRF 152
FG V+ +V D +T SK FGFV +
Sbjct: 2774 PFGNVVSAKVFIDKQTNLSKCFGFVSY 2854
>05273
Length = 1009
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -1
Query: 112 PWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
P TT+ L++YF FG++ V D +TG S+G+GFV
Sbjct: 175 PIITTDHSLREYFDKFGDIDEAVVITDRQTGKSRGYGFV 59
>14637
Length = 455
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = -1
Query: 73 YVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLM 132
Y ++P +M + A+ + S+L + LP + +QDL F FG V+
Sbjct: 284 YTASFPNAFNNQMQQNAAAKQSEGPDG----SNLFIYHLPQEFGDQDLMQMFMPFGNVIS 117
Query: 133 VQVKKDLKTGHSKGFGFVRF 152
+V D +T SK FGFV +
Sbjct: 116 AKVFIDKQTNLSKCFGFVSY 57
>20169
Length = 1364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = -1
Query: 192 KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVA----QSLCGED 247
KV+VG +EL+ F +YG + +V++ + FAFV F D++ A Q+L G
Sbjct: 1067 KVYVGELGHGCAKQELEDKFAKYGPLKNVWVARRPAGFAFVEFEDNRDAEDAVQALDGAR 888
Query: 248 LIIKGISVHISN 259
+ + V +SN
Sbjct: 887 INGRRARVEMSN 852
>23720
Length = 739
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = -1
Query: 192 KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTF--ADDKV----AQSLCG 245
+V++GR +++++FF YG V D+ + + F F ADD V + LCG
Sbjct: 682 RVYIGRLPYQAREKDIERFFRGYGRVNDIMLKNGYGFVEFEDFRDADDAVYELNGKDLCG 503
Query: 246 EDLIIK 251
E +II+
Sbjct: 502 ERVIIE 485
>04988
Length = 705
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = -3
Query: 192 KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTF--ADDKV----AQSLCG 245
+V++GR +++++FF YG V D+ + + F F ADD V + LCG
Sbjct: 649 RVYIGRLPYQAREKDIERFFRGYGRVNDIMLKNGYGFVEFEDFRDADDAVYELNGKDLCG 470
Query: 246 EDLIIK 251
E +II+
Sbjct: 469 ERVIIE 452
>03744
Length = 3486
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = -1
Query: 73 YVVNYPKDNKRKMDETDASSAVKVKRAVQ----KTSDLIVLGLPWKTTEQDLKDYFSTFG 128
Y ++P + A+SA K + ++L + LP + +QDL F FG
Sbjct: 3321 YAASFPNAFNPQAQMQQANSAGKHSEGPRVPGPDGANLFIYHLPQEFGDQDLMQMFMPFG 3142
Query: 129 EVLMVQVKKDLKTGHSKGFGFVRF 152
V+ +V D +T SK FGFV +
Sbjct: 3141 NVVSAKVFIDKQTNLSKCFGFVSY 3070
>00817
Length = 2606
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = -2
Query: 189 RSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFI-----PKPFRAFAFVTFAD-DKVAQS 242
R+RKVF+G D L+ +F +YG++ + + K R F+F+TF + + V +
Sbjct: 2557 RNRKVFIGGMHPDTDESSLRSYFEKYGDIRECIVVKDPATKRSRCFSFITFGNAENVDEV 2378
Query: 243 LCGEDLIIKGISVHISNAEPKHNS 266
I G +V A P+ ++
Sbjct: 2377 QKDRPHTIDGRTVETKRAMPREDT 2306
>17681
Length = 964
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 44/188 (23%)
Frame = +2
Query: 97 KRAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF---T 153
K + + V L + + L++ F+ FGE+ ++ +D +T SKG+ FV F
Sbjct: 11 KTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKA 190
Query: 154 EYETQVKVMSQR----HMIDGRWCDCKLPNSKQSPDEPLR-------------------- 189
E E ++ M+ + I W KLP ++S +
Sbjct: 191 EAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGCGGGAGNGIKN 370
Query: 190 ----------------SRKVFVGRCTEDMTAEEL-QQFFCQYGEVVDVFIPKPFRAFAFV 232
+ V+ G ++ ++EL + F Q+G + DV + K + FAF+
Sbjct: 371 NQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD-KGFAFI 547
Query: 233 TFADDKVA 240
F + A
Sbjct: 548 KFVTKEAA 571
>11126
Length = 1061
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = -3
Query: 191 RKVFVGRCTEDMTAEELQQFFCQYGEV------VDVFIPKPFRAFAFVTFAD-DKVAQSL 243
R V+VG TAEEL+Q F G V D + P + FA+V FAD D V +
Sbjct: 630 RSVYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKYSGHP-KGFAYVEFADKDSVVTAK 454
Query: 244 C-GEDLIIKGISVHIS 258
C G D + +G + ++
Sbjct: 453 CTGMDSLFRGRQIKVT 406
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -3
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
+ V + + T ++L+ +F G V V + D +GH KGF +V F + ++ V
Sbjct: 624 VYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKYSGHPKGFAYVEFADKDSVV 463
>02343
Length = 1715
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Frame = -2
Query: 104 SDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFT---EYETQVK 160
++L + GL TT++DL + FG + + D T KG+GFV F E V+
Sbjct: 1264 TNLYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQ 1085
Query: 161 VMSQRHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDV 220
+ Q I + +KQ +P +++ T + L+ F YG V+
Sbjct: 1084 AL-QAQGIQAQM-------AKQQEQDP---TNLYIANLPLHFTEKHLEGLFKDYGTVIST 938
Query: 221 FI 222
I
Sbjct: 937 RI 932
>15371
Length = 383
Score = 37.7 bits (86), Expect = 0.010, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = -2
Query: 73 YVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLM 132
Y ++P + A+SA K ++L + LP + +QDL F FG V+
Sbjct: 247 YAASFPNAFNPQAQMQQANSAGKHSEG-PDGANLFIYHLPQEFGDQDLMQMFMPFGNVVS 71
Query: 133 VQVKKDLKTGHSKGFGFVRF 152
+V D +T SK FGFV +
Sbjct: 70 AKVFIDKQTNLSKCFGFVSY 11
>17775
Length = 1282
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = -2
Query: 69 GNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQ-KTSDLIVLGLPWKTTEQDLKDYFSTF 127
G ++Y K +R+ + + +K++R + + +L V L ++ L+ FS F
Sbjct: 450 GRIIYCGRAQKRAERQAELKERFEKIKLERINRYQGVNLYVKNLDDSIDDERLRKEFSNF 271
Query: 128 GEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCK 176
G + ++ + G SKGFGFV F+ E K +++ ++GR K
Sbjct: 270 GTITSAKIMTE--GGRSKGFGFVCFSSPEEATKAVTE---MNGRIIVAK 139
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 22/151 (14%)
Frame = -2
Query: 142 GHSKGFGFVRFTEYETQVKVMSQRH--MIDGRWCDCKLPNSKQSPDEPLRSR-------- 191
G S+GFGFV F E E K + + + + GR C + L+ R
Sbjct: 540 GKSRGFGFVSFEEPEGAEKAVDEINGTEVSGRIIYCGRAQKRAERQAELKERFEKIKLER 361
Query: 192 -------KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP---FRAFAFVTFADDKVAQ 241
++V + + E L++ F +G + I + F FV F+ + A
Sbjct: 360 INRYQGVNLYVKNLDDSIDDERLRKEFSNFGTITSAKIMTEGGRSKGFGFVCFSSPEEAT 181
Query: 242 SLCGE--DLIIKGISVHISNAEPKHNSNRQL 270
E II ++++ A+ K + QL
Sbjct: 180 KAVTEMNGRIIVAKPLYVALAQRKEDRRAQL 88
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = -2
Query: 105 DLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ 164
++ + L + L D FS FG +L ++ D + SKG+GFV F E +
Sbjct: 927 NVFIKNLDKTIDNKALYDTFSAFGNILSCKIACDEQG--SKGYGFVHFETEE------AA 772
Query: 165 RHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGR 197
R ID + L +KV+VGR
Sbjct: 771 RQAID------------KVNGMLLNGKKVYVGR 709
>11108
Length = 493
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -1
Query: 98 RAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYET 157
R + + + + G+PW +EQ L F FG + + K+ + KG+ ++ F E +
Sbjct: 310 RMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEWPGKEQQAAQPKGYVYIIF-ESDK 134
Query: 158 QVKVM 162
QVK +
Sbjct: 133 QVKAL 119
>02809
Length = 1475
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = -1
Query: 192 KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQ 241
KV+VG +EL+ F +YG + +V++ + FAFV F D++ A+
Sbjct: 1331 KVYVGELGHGCAKQELEDKFAKYGPLKNVWVARRPAGFAFVEFEDNRDAE 1182
>13822
Length = 963
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
L V +P++ E DL+ FG +L V++ + + SKGFGFV F
Sbjct: 336 LHVSNIPFRFREADLRQLLGPFGTILDVEIIFNER--GSKGFGFVTF 202
>00029
Length = 2204
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -3
Query: 192 KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTF-----ADDKVAQSLCGE 246
K+F+G +D EEL+ F +YG V + + + F FV ADD ++ +L G
Sbjct: 2133 KIFIGNLGDDTDPEELRALFEKYGSVAECDV---LKNFGFVHMVKKGEADDAIS-NLNGY 1966
Query: 247 DLIIKGISVHISNAEPKHNS 266
++ + + V +S K S
Sbjct: 1965 NIGGQRMRVELSTGAGKGGS 1906
>02064
Length = 1195
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 108 VLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--R 165
V LP+ T QDL++ F G V ++ D G S G G VRF + V+ ++ R
Sbjct: 91 VKNLPYAITWQDLRERFQEIGVVKYSEITMD--KGRSTGQGLVRFATEDDAVRAINSMDR 264
Query: 166 HMIDGRWCDCKL 177
+GR K+
Sbjct: 265 TRYEGRTIGVKM 300
>00556
Length = 2189
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 96 VKRAVQKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTE 154
V VQ + I +G LP +E +K+ +FG + + +D TG SKGF F + +
Sbjct: 732 VSTVVQDSDHKIFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLD 911
>28605
Length = 697
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 192 KVFVGRCTEDMTAE-ELQQFFCQYGEVVDVFIPKPFRAFAFVTFA 235
+VFV + D T+E ELQ+ F +YG V+D + + FV F+
Sbjct: 566 RVFVANLSSDETSEAELQELFSKYGNVLDTLVHH--NRYGFVQFS 438
>09968
Length = 2913
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Frame = -1
Query: 90 ASSAVKVK-------RAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTG 142
A S V VK +A +L V GL T DLK F G+V+ +V + ++
Sbjct: 1455 AKSGVAVKPAKGKDDKATTSIRNLWVSGLSSSTRATDLKSLFGKHGKVIGAKVVTNTRSP 1276
Query: 143 HSKGFGFVRFTEYETQVKVMSQRHMID 169
FGFV + K + H +
Sbjct: 1275 GRLCFGFVTMASADETTKCIQHLHRTE 1195
>02347
Length = 928
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -3
Query: 192 KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVA 240
K++VG D + +E+++ F YG + +V++ + FAFV F D + A
Sbjct: 743 KIYVGDLPPDASEKEVERAFNYYGHLRNVWVARNPPGFAFVEFEDTRDA 597
>16427
Length = 1313
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 102 KTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF---TEYETQ 158
+ L V GL + E+ L+ FS FG + V +D S+GFGFV + + E
Sbjct: 130 RPGKLFVGGLAEEIDEKVLEREFSKFGRITESMVIRDKVRQVSRGFGFVTYENPMDAEEA 309
Query: 159 VKVMSQRHMI 168
VK M + ++
Sbjct: 310 VKHMDGKEIL 339
>08958
Length = 680
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 192 KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVT--FADDKVAQSLCGEDLI 249
++FVG T D++ ++ ++ F +GEV + ++ R F F+ + + A + L
Sbjct: 71 RLFVGNLTPDVSEDDFKKLFSPFGEVSEAYVNSG-RGFGFIRLDYRHNAEAAKAALDGLQ 247
Query: 250 IKGISVHISNA 260
KG S+ + A
Sbjct: 248 RKGRSLRVRYA 280
>23655
Length = 929
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGF 147
+ V G+ TTE ++D F+ FGE+ V + +D TG ++ F
Sbjct: 899 MFVGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRDF 774
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -1
Query: 187 PLRS----RKVFVGRCTEDMTAEELQQFFCQYGEVVDV 220
P+RS K+FVG ED T + ++ F ++GE+ V
Sbjct: 929 PIRSSTVREKMFVGGVKEDTTEDMIRDTFNEFGEITGV 816
>14258
Length = 1063
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 117 EQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
+QDL F FG V+ +V D +T SK FGFV +
Sbjct: 101 DQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSY 208
>09736
Length = 1319
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDG 170
+G SKGFGFVRF+E Q + + + + G
Sbjct: 1279 SGKSKGFGFVRFSEENDQQRALVEMQHMTG 1190
>19556
Length = 917
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = -1
Query: 188 LRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK-----PFRAFAFVTFADDKVAQS 242
L+ ++ F+G + +T EEL + F ++G+V +V I R FA+V ++
Sbjct: 839 LQRKENFIGGLVKGVTEEELMEKFSRFGQVSNVDIKTRTNGIDSRTFAYVNLTAEENGFK 660
Query: 243 LC 244
C
Sbjct: 659 KC 654
>12506
Length = 1056
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 120 LKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
L F FG+++ +Q+ D +T +GF F+ F
Sbjct: 1015 LHAAFLPFGDIVDIQIPLDYETEKHRGFAFIEF 917
>25950
Length = 417
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 15/78 (19%)
Frame = -2
Query: 103 TSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYE------ 156
T + V + + + ++L+ +F G + V + + GH KGF ++ F E
Sbjct: 284 TRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETAL 105
Query: 157 ---------TQVKVMSQR 165
Q+KVM++R
Sbjct: 104 AMNETLFRGRQIKVMTKR 51
>33504
Length = 282
Score = 28.9 bits (63), Expect = 4.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 185 DEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDV 220
DE S VF+G D+T ++ F QYGE+V++
Sbjct: 151 DEYKDSAWVFIGGLPYDLTEGDIICVFSQYGEIVNI 258
Score = 28.5 bits (62), Expect = 5.0, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 110 GLPWKTTEQDLKDYFSTFGEVLMVQVKKD 138
GLP+ TE D+ FS +GE++ + + +D
Sbjct: 187 GLPYDLTEGDIICVFSQYGEIVNINLVRD 273
>19246
Length = 440
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 39 CGLRYRNPVSQCMRGVRLVEGILHAPDAGWGNLVYVV 75
CG +P+S C+ +R + L P + W L+ V+
Sbjct: 426 CGDACNSPLSDCVLTLRRISSALPMPSSSWSGLLLVL 316
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|20149754|ref|NP_619609.1| UFM1-specific peptidase 2
[Mus musculus]
(461 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
17875 352 1e-97
31154 77 2e-14
33160 30 1.9
02203 30 2.4
>17875
Length = 1155
Score = 352 bits (904), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 162/282 (57%), Positives = 203/282 (71%)
Frame = -2
Query: 176 ILRYMKGTSIVVPEPLHFQLPGKKNLVTVLYPSGIPDDQLQAYRKELHDLFNLPHDRPYF 235
ILR M T P+HF +P + +T +YP I +D L R+ LH+ LP D+P F
Sbjct: 917 ILRRMSSTH---QSPVHFTIPHRHTCITAVYPRNISEDNLVKRRQYLHEKMCLPLDKPLF 747
Query: 236 KRINAYHFPDELYKDGYIRNPHTYLSPPNIEGSMICVVQGTYAYHHYMQDRIDDNGWGCA 295
+R N FP + + GYI NPH LSP + G VVQG Y+YHHYMQDR DD+ WGCA
Sbjct: 746 RRANTRLFPGQRAEGGYIINPHLGLSPSGVVGGTPHVVQGNYSYHHYMQDRFDDDKWGCA 567
Query: 296 YRSLQTICSWFRHQGYTERSIPTHREIQQALVDAGDKPATFVGSRQWIGSIEVQMVLNQL 355
YRSLQT+ SWFR QGYT+ +P+HR+IQQALV GDK ++FVGS++WIGS EV VL+ L
Sbjct: 566 YRSLQTLVSWFRFQGYTDSPVPSHRDIQQALVAVGDKESSFVGSKKWIGSFEVSFVLDHL 387
Query: 356 IGVTSKILFVNQGSEMASQGRELANHFQNVGTPVMVGGGVLAHTILGVAWNETTGQIKFL 415
+GVT K L V+ G+E+AS+GRELA HF GTP+M+GGGVLAHTILGV +NE +G IKFL
Sbjct: 386 LGVTCKFLNVSAGAELASKGRELAQHFDTEGTPIMIGGGVLAHTILGVDYNEMSGDIKFL 207
Query: 416 ILDPHYTGAEDLQVMLEKGWCGWKSPDFWNKDAYYNLCLPQR 457
ILDPHYTG EDL + ++GWCGWK P+FWN A+YN+C+P R
Sbjct: 206 ILDPHYTGGEDLNTIHKEGWCGWKGPEFWNATAHYNMCMPMR 81
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = -1
Query: 117 TPLGAVTPILERENEEHHYINMSLPIDAVVSVAPEESWGKVRKLLVDAILRQLVDVEKCI 176
T L + P + + ++ SLP+DA+V V ++ ++ L V A+ QL + C+
Sbjct: 1107 TLLPHLCPAVHQRTGSFRFLKCSLPLDAIVEVDVKDQVSSLQSLFVTAVTSQLQAMLACL 928
Query: 177 -LRYMKGTSIVVPEPLHFQLPGKKNL 201
L + K PEP P + ++
Sbjct: 927 QLHHSKENEFYTPEPCPLHNPTQTHV 850
>31154
Length = 422
Score = 76.6 bits (187), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 57/101 (56%)
Frame = +3
Query: 298 SLQTICSWFRHQGYTERSIPTHREIQQALVDAGDKPATFVGSRQWIGSIEVQMVLNQLIG 357
+LQ CS T +P+ ZIQ+ALV GDKP FVGSRQWIGS EV + L+ G
Sbjct: 30 ALQHACS------KTVPDVPSLLZIQRALVRIGDKPDHFVGSRQWIGSYEVCLCLDFFYG 191
Query: 358 VTSKILFVNQGSEMASQGRELANHFQNVGTPVMVGGGVLAH 398
V KI+ + QG+++ L HF +P+M+G ++ H
Sbjct: 192 VPCKIIHIKQGADLRQHLSTLQTHFSTKASPIMMGVILMPH 314
>33160
Length = 788
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 394 GVLAHTILGVAWNETT--GQIKFLILDPHYTGAEDLQVMLEKGW 435
VL H G W+ T + L+LDPHY +V++EK W
Sbjct: 555 SVLVHCSDG--WDRTAQLTSLAMLMLDPHYRTIRGFEVLVEKEW 430
>02203
Length = 1671
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 48 RVCNSSVYLWPNSDANTGELTDSSACKNVVR 78
R C +++++WP SD + G SS C R
Sbjct: 1585 RFCTNTLWMWPGSDVSFGRSIASSVCWGSFR 1493
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 48 RVCNSSVYLWPNSDANTGELTDSSACKNVVR 78
R C +++++WP SD + G SS C R
Sbjct: 521 RFCTNTLWMWPGSDVSFGRSIASSVCWGSFR 429
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6678413|ref|NP_033441.1| triosephosphate isomerase 1
[Mus musculus]
(249 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03568 351 2e-97
07349 44 5e-05
>03568
Length = 1712
Score = 351 bits (901), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/245 (69%), Positives = 195/245 (79%)
Frame = +1
Query: 5 RKFFVGGNWKMNGRKKCLGELICTLNAANVPAGTEVVCAPPTAYIDFARQKLDPKIAVAA 64
RKFFVGGNWKMNG KK + +I L + TEVV APPT Y+ + Q + + VAA
Sbjct: 85 RKFFVGGNWKMNGNKKSIDGIITFLKDGTLDPNTEVVVAPPTIYLPYVHQNICGTVQVAA 264
Query: 65 QNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVSHALAEGLGV 124
QNCYKV GAFTGE SP M+KD G +WV+LGHSERRHVFGES+ELIG+K +AL +GL +
Sbjct: 265 QNCYKVEKGAFTGETSPEMLKDNGISWVILGHSERRHVFGESNELIGEKTKYALEKGLSL 444
Query: 125 IACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQE 184
I CIGEKLDER+AG TE+VVF+Q K IADNV DW +VV+AYEPVWAIGTGKTATP+QAQE
Sbjct: 445 IPCIGEKLDERDAGKTEEVVFKQMKFIADNVSDWKRVVIAYEPVWAIGTGKTATPEQAQE 624
Query: 185 VHEKLRGWLKSNVNDGVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDI 244
VH+ LR WL NV+ VAQSTRIIYGGSVT CKELA +PDVDGFLVGGASLKP+FV I
Sbjct: 625 VHKSLRDWLAKNVSAEVAQSTRIIYGGSVTADNCKELAGKPDVDGFLVGGASLKPDFVKI 804
Query: 245 INAKQ 249
INAKQ
Sbjct: 805 INAKQ 819
>07349
Length = 960
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +3
Query: 226 DVDGFLVGGASLKPEFVDIINAKQ 249
D DGFLVGGASLKP+FV IINAKQ
Sbjct: 18 DGDGFLVGGASLKPDFVKIINAKQ 89
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|7106387|ref|NP_036097.1| proteasome (prosome,
macropain) subunit, alpha type 5 [Mus musculus]
(241 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
20771 351 2e-97
02448 166 1e-41
24591 165 2e-41
17033 137 3e-33
00789 127 3e-30
14551 127 5e-30
04255 91 5e-19
19133 70 1e-12
03425 42 2e-04
28971 42 2e-04
01337 39 0.002
37174 36 0.015
11023 33 0.077
00434 29 1.5
00497 27 7.5
>20771
Length = 674
Score = 351 bits (900), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 163/198 (82%), Positives = 182/198 (91%)
Frame = +2
Query: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQT+EGV LAVEKR+TS L+E
Sbjct: 80 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTNEGVVLAVEKRVTSSLIE 259
Query: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
P+SIEKI+E+D HIGCAMSGLIAD++TLID+ARVE QNHWFTYNE M+VESVTQAVSNLA
Sbjct: 260 PTSIEKIMEVDKHIGCAMSGLIADSRTLIDRARVEAQNHWFTYNENMSVESVTQAVSNLA 439
Query: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
L FG++D DPGAMSRPFGVALL GVD GP+LFHMDPSGTF+Q DA+AIGS SEGAQ +
Sbjct: 440 LAFGDDDPDPGAMSRPFGVALLIAGVDSNGPRLFHMDPSGTFIQYDAKAIGSGSEGAQQA 619
Query: 181 LQEVYHKSMTLKEAIKSS 198
LQE YHKS+TLK+A KS+
Sbjct: 620 LQEQYHKSITLKDACKSA 673
>02448
Length = 1302
Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 140/234 (59%), Gaps = 3/234 (1%)
Frame = +2
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKI 67
YDR + FSP+G LFQVEYA EA+K GSTA+G++ + V L VEK+ + L E ++ KI
Sbjct: 263 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGNNLVVLGVEKKAVAKLQEERTVRKI 442
Query: 68 VEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEED 127
+D H+ A +GL ADA+ LI++AR+E Q+H T + +TVE +T+ ++ L ++ + +
Sbjct: 443 ALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQKYTQSN 622
Query: 128 ADPGAMSRPFGVALLFGGVDEKG-PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH 186
RPFG++ L G D G P L+ DPSGT+ + A IG ++ + L++ Y
Sbjct: 623 G-----RRPFGLSSLIIGFDYDGSPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHYT 787
Query: 187 KSMTL--KEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
+ KE IK +L L +V++ A N+E+A ++ GQ M +E+E+ I
Sbjct: 788 DEVAASDKETIKLALKALLEVVQS--GAKNMEVAVMRRGQALQMLESDEIEKYI 943
>24591
Length = 1801
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 139/234 (59%), Gaps = 3/234 (1%)
Frame = +1
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKI 67
YDR + FSP+G LFQVEYA EA+K GSTA+G++ V L VEK+ + L E ++ KI
Sbjct: 40 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGDNLVVLGVEKKAVAKLQEERTVRKI 219
Query: 68 VEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEED 127
+D H+ A +GL ADA+ LI++AR+E Q+H T + +TVE +T+ ++ L ++ + +
Sbjct: 220 ALLDEHVALAFAGLTADARILINRARIECQSHKLTVEDPVTVEYITRHIAQLKQKYTQSN 399
Query: 128 ADPGAMSRPFGVALLFGGVDEKG-PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH 186
RPFG++ L G D G P L+ DPSGT+ + A IG ++ + L++ Y
Sbjct: 400 G-----RRPFGLSSLIIGFDYDGTPHLYQTDPSGTYHEWKANTIGRNAKTVREFLEKHYT 564
Query: 187 KSMTL--KEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
+ KE IK +L L +V++ A N+E+A ++ GQ M +E+E+ I
Sbjct: 565 DEVAASDKETIKLALKALLEVVQS--GAKNMEVAVMRRGQALQMLESDEIEKYI 720
>17033
Length = 2217
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 128/214 (59%), Gaps = 1/214 (0%)
Frame = -3
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKI 67
YD + FSP+GR+FQVEYA +A++ TAIGI+ +GV + VEK +TS L E + +++
Sbjct: 2149 YDLSASHFSPDGRVFQVEYAQKAVENSGTAIGIRGKDGVVMGVEKLVTSKLYEQGANKRL 1970
Query: 68 VEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEED 127
ID HIG A++GL+ADA+ L+++A+ E+ N+ F Y + ++ +T V+ +
Sbjct: 1969 FNIDRHIGGAVAGLLADARQLMERAKEESSNYRFNYGSPVPLKYLTDRVAGYVHAYTLHS 1790
Query: 128 ADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHK 187
A RPFG +++ D GPQ+F ++PSG AIG A + A++ ++++ K
Sbjct: 1789 A-----VRPFGTSMIVASYDAVGPQMFLVEPSGVSWGYYGCAIGKAKQTAKTEIEKLKMK 1625
Query: 188 SMTLKEAIKSSLIILKQVMEE-KLNATNIELATV 220
+T+++ +K I+ V +E K + +EL+ V
Sbjct: 1624 DLTMQDLVKEVARIIYVVHDEVKDKSFELELSWV 1523
>00789
Length = 1584
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 7/221 (3%)
Frame = +1
Query: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIE 65
YD FSPEGRL+QVEYA+EAI T +GI +G+ LA E+R T+ L+ E S E
Sbjct: 31 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILAKDGIVLAAERRNTNKLLDEVSYSE 210
Query: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA---LQ 122
KI + + C+++G+ +DA L ++ R+ Q + Y E + E V + ++ Q
Sbjct: 211 KIYRLSDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQVVATLCDIKQAYTQ 390
Query: 123 FGEEDADPGAMSRPFGVALLFGGVDEK-GPQLFHMDPSGTFVQCDARAIGSASEGAQSSL 181
FG + RPFGV++L+ G D+ G QL+ DPSG + A IG+ S A S L
Sbjct: 391 FGGK--------RPFGVSILYMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSANAVSLL 546
Query: 182 QEVYHKS-MTLKEAIKSSLIILKQVME-EKLNATNIELATV 220
++ Y + +L EA+ S+ +L + ++ KL +E+AT+
Sbjct: 547 KQEYKEDESSLDEALALSIKVLGKTLDLTKLTPDKVEMATL 669
>14551
Length = 1344
Score = 127 bits (318), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 2/237 (0%)
Frame = +3
Query: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEK 66
Y + TFSP G+L Q+EYA+ A+ G+ ++GI+ + GV LA EK+ S + SI K
Sbjct: 150 RYSFSLTTFSPSGKLVQIEYALAAVGAGAPSVGIKATNGVVLATEKKQKSVXYDEHSINK 329
Query: 67 IVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEE 126
+ I +IG SG+ D + L +AR + + YNE + + Q V+ + +F +
Sbjct: 330 VETITKNIGIVYSGMGPDYRVLCRRARKLAEQYKRVYNEQIPTAQLVQRVAAVMQEFTQS 509
Query: 127 DADPGAMSRPFGVALLFGGVDE--KGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEV 184
RPFGV+LL G DE K P L+ DPSG + A A+G ++ L++
Sbjct: 510 GG-----VRPFGVSLLMAGWDEDDKKPFLYQCDPSGAYFAWKATAMGKNHINGKTFLEKR 674
Query: 185 YHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241
Y +++ L++A+ ++++ LK+ E ++ NIE+ F E+++ + +
Sbjct: 675 YSETLELEDAVHTAILALKESFEGQMTEDNIEIGICN-SSGFRRLEPSEIKDYLASV 842
>04255
Length = 1758
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Frame = -2
Query: 38 IGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQ 97
G Q C +++ L++P+++ + + IGC M+G+IAD+++ + +AR E
Sbjct: 1514 CGCQRKRQRCYCHTEKVPDKLLDPTTVTHLYSLTERIGCVMTGMIADSQSQVQRARYEAA 1335
Query: 98 NHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVAL-LFGGVDEKGPQLFHM 156
+TY + V+ + + ++N+ + + A RP G + L G DEKGP+++
Sbjct: 1334 KWKYTYGYDIPVDMLCKRIANINQVYTQ-----SAEMRPLGCCMILIGYDDEKGPEVYKT 1170
Query: 157 DPSGTFVQCDARAIGSASEGAQSSLQEVYHK--SMTLKEAIKSSLIILKQVMEEKLNATN 214
DP+G + A + GS A L++ K T EA + ++ L V+ A+
Sbjct: 1169 DPAGYYCGFKATSAGSKQLEANGFLEKKIKKKQDFTYNEAAEIAITCLSTVLSADFKASE 990
Query: 215 IELATV-QPGQNFHMFTKEELE 235
+E+ V + NF + T+ +++
Sbjct: 989 VEVGIVTKDNPNFRILTEADID 924
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -3
Query: 14 TFSPEGRLFQVEYAIEAIKLGS-TAIGIQTSEGVCLAVEKRITS 56
SPEGRL+QVEYA +AI G T++ ++ + + +K+ +
Sbjct: 1588 NLSPEGRLYQVEYAFKAINQGGLTSVAVRGKDSAVIVTQKKFRT 1457
>19133
Length = 692
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Frame = +1
Query: 81 LIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVA 140
L ADA+ L + + E + + Y + + V + A+ N LQ RPFGV
Sbjct: 1 LTADARLLCNFMQTECLDSRWAYQQPLPVSRLVSAIGN-KLQIPTHRYG----RRPFGVG 165
Query: 141 LLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHK--SMTLKEAIKSS 198
LL G D GP ++ PS + C A AIG+ S+ A++ L+ + +L E +K
Sbjct: 166 LLIAGYDWSGPHIYQTCPSANYYDCKAMAIGARSQSARTYLERHLDQFPQCSLDELVKHG 345
Query: 199 LIILKQVM--EEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
L L+ + E L+ N L V F ++ E + +
Sbjct: 346 LRALRDTLPSEVTLSTKNCSLGIVDKDMKFKIYDDENVASYL 471
>03425
Length = 933
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +3
Query: 138 GVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKS 197
G AL+ GGVD GP L+ + P G+ + +GS S A ++ ++ + M+ EA+K
Sbjct: 6 GAALVLGGVDVTGPHLYSIWPHGSTDKLPFVTMGSGSLAAMATFEDRFKPDMSRDEAMK- 182
Query: 198 SLI---ILKQVMEEKLNATNIELATV 220
L+ I + + + +NI+L +
Sbjct: 183 -LVRDAIAAGIFNDLGSGSNIDLCVI 257
>28971
Length = 437
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 135 RPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIG 171
RPFGV+LL G D + P L+ DPSG + A A+G
Sbjct: 31 RPFGVSLLICGWDNERPYLYQSDPSGAYFAWKATAMG 141
>01337
Length = 2947
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = -3
Query: 128 ADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHK 187
AD RP V +L G+D+ GP LF +D G +Q G S + Y K
Sbjct: 1097 ADALRSQRPKFVNILMAGMDDSGPALFFLDYLGALIQVPFAVHGYGGMFTLSIMDRYYKK 918
Query: 188 SMTLKEAI 195
M EA+
Sbjct: 917 DMNKDEAV 894
>37174
Length = 146
Score = 35.8 bits (81), Expect = 0.015, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLA 49
+Y R N P +L Q+EYA+ A+ G+ +GI+ + GV L
Sbjct: 13 QYKRVYNEQIPTAQLVQIEYALAAVGAGAPVVGIKATNGVVLG 141
>11023
Length = 1057
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 141 LLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMT 190
+L G DEKGP+++ DP+G + A + GS A L++ +S T
Sbjct: 993 ILIGYDDEKGPEVYKTDPAGYYCGFKATSAGSKQLEANGFLEKRSRRSKT 844
>00434
Length = 892
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 226 FHMFTKEELEEVIKDI 241
F MF+KEELE VIKDI
Sbjct: 10 FQMFSKEELEAVIKDI 57
>00497
Length = 1184
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = +3
Query: 94 VETQNHWFTY--NETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151
VET+ F+Y N+ M SV +S + L + P+ + G+D +G
Sbjct: 24 VETRLKMFSYIHNKEMDTSSVAAMLSTI-LYYRR--------FFPYYXYNIVAGLDTEGK 176
Query: 152 Q-LFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQ 204
+F DP G++ + RA GSAS S LQ + + +K + + L Q
Sbjct: 177 GCVFSFDPVGSYERETYRAGGSAS----SMLQPLLDNQIGMKNQAGAKQVPLSQ 326
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31559887|ref|NP_758512.2| methylenetetrahydrofolate
dehydrogenase (NADP+ dependent) 1-like [Mus musculus]
(977 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11972 352 3e-97
06310 199 4e-51
05632 87 4e-17
>11972
Length = 736
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/241 (70%), Positives = 196/241 (81%)
Frame = -3
Query: 594 EKGYSRQAQFDIAVASEIMAVLALTDSLTDMKERLGRMVVASDKDGQPVTAEDLGVTGAL 653
EK +R+ QFDI VASEIMA+LALT L DM+ERLG+MVVAS K G+PVTA+DLGV+GAL
Sbjct: 728 EKNMTRETQFDITVASEIMAILALTSDLRDMRERLGKMVVASSKAGEPVTADDLGVSGAL 549
Query: 654 TVLMKDAIKPNLMQTLEGTPVFVHAGPFANIAHGNSSVLADKIALKLVGEEGFVVTEAGF 713
TVLM+DA++PNLMQTLEGTPVFVHAGPFANIAHGNSS+LADK+ALK+VGE+GFVVTEAGF
Sbjct: 548 TVLMRDALRPNLMQTLEGTPVFVHAGPFANIAHGNSSILADKLALKIVGEKGFVVTEAGF 369
Query: 714 GADIGMEKFFNIKCRXXXXXXXXXXXXXXXXXXKMHGGGPSVTAGVPLKKEYTEENIQLV 773
GADIGMEKFFNIKCR KMHGGGP+VTAGVPL K+YTEEN++LV
Sbjct: 368 GADIGMEKFFNIKCRYSGLVPNAVVLVATVRALKMHGGGPTVTAGVPLPKDYTEENLELV 189
Query: 774 ADGCCNLQKQIQIAQLFGVPVVVALNVFKTDTRAEIDLVCELAKRAGAFDAVPCYHWSAG 833
GC NL KQI+ A FG+PVVVA+N F TDT+AE++LV LA+ GAFDAV HW+ G
Sbjct: 188 EKGCSNLLKQIENANYFGIPVVVAVNAFATDTQAELELVQRLARENGAFDAVISSHWANG 9
Query: 834 G 834
G
Sbjct: 8 G 6
>06310
Length = 1575
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 108/125 (86%)
Frame = +2
Query: 852 SRFQFLYDVQLPIVEKIRVIAQTVYGAKDIELSPEAQSKIDRYTQQGFGNLPICMAKTHL 911
S FQFLYDV+LPI EKI +IA+ +YGA +EL P A+ +++RYT+QGF +LPICMAKTHL
Sbjct: 11 SNFQFLYDVKLPIEEKIAIIAKKIYGADGVELEPLAKEQVERYTRQGFNDLPICMAKTHL 190
Query: 912 SLSHEPDKKGVPRDFTLPISDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDIDLDTETE 971
SLSH P+KKG P+ F LPI +VRASIGAGFIYPL+GTMSTMPGLPTRPCFYDID+D +TE
Sbjct: 191 SLSHMPEKKGAPKGFVLPIREVRASIGAGFIYPLIGTMSTMPGLPTRPCFYDIDIDPDTE 370
Query: 972 QVKGL 976
++ GL
Sbjct: 371 EIVGL 385
>05632
Length = 930
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/45 (82%), Positives = 43/45 (95%)
Frame = -1
Query: 932 DVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDIDLDTETEQVKGL 976
+VRASIGAGFIYPL+GTMSTMPGLPTRPCFYDID+D +TE++ GL
Sbjct: 930 EVRASIGAGFIYPLIGTMSTMPGLPTRPCFYDIDIDPDTEEIVGL 796
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31980873|ref|NP_080940.2| vacuolar protein sorting 53
[Mus musculus]
(832 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07356 352 5e-97
20681 32 0.83
04107 30 3.8
16285 30 4.2
>07356
Length = 860
Score = 352 bits (902), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 212/266 (79%), Gaps = 7/266 (2%)
Frame = +1
Query: 561 YCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISSSIQLLVQDLDAACDPALIAM 620
YC+ TT QL +KL+EKVD L I+L+ E D F TVISS IQLLVQDL+AAC+PAL AM
Sbjct: 1 YCMETTSQLADKLREKVDPELRSSIDLSAEQDMFHTVISSCIQLLVQDLEAACEPALTAM 180
Query: 621 SKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFIT 680
SKMPW +E VGDQS YVT++ H+KQN+P+IRDNL S+RKYFTQFC+KFANSFIPKFI
Sbjct: 181 SKMPWSTIEAVGDQSGYVTAITAHLKQNLPVIRDNLLSSRKYFTQFCVKFANSFIPKFIH 360
Query: 681 HLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVVKGMTRAEMIL 740
LFKCKP S V AEQLLLDTHSLK VLL+LPS+GSQV RKAPAS+TKIVVKGMT+AEMIL
Sbjct: 361 TLFKCKPGSTVAAEQLLLDTHSLKTVLLELPSLGSQVARKAPASFTKIVVKGMTKAEMIL 540
Query: 741 KVVMAPHEPLVVFVDNYIKLLTDCNSETFQKILDMKGLKRSEQSSMLELLRQRLP--APP 798
KVVM+PH+P FVDN+I+LLTD + FQ++L+MKG++R+EQ +++E+ R R+P A
Sbjct: 541 KVVMSPHDPPQGFVDNFIRLLTDADVTEFQRVLEMKGVRRAEQGTLIEMYRARVPVSAVI 720
Query: 799 SGTEGSS-----TLSLIAPTPEQESS 819
+G S TLS +A +PE ESS
Sbjct: 721 GNAQGQSLPLSPTLSQVA-SPEPESS 795
>20681
Length = 1217
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Frame = -3
Query: 55 EQSLANIDDVVNKIR--LKIRRLDDNIRTV--VRGQTNVGQDGRQALEEAQKAIQQLFGK 110
EQ LA+ ++VNK++ L R+ RT + +N+ ++ + LE A + Q L K
Sbjct: 555 EQLLADSKNLVNKLQPLLCAERVSQMTRTYNDIDAVSNLLEEKERDLELAARIGQTLLSK 376
Query: 111 IKDIKDKAEKSEQMVKEITRDIKQLDHAKRHLTTSI----------TTLNHLHMLAGGVD 160
KD+ + E E+ + T IKQL H + T ++L + GG
Sbjct: 375 NKDLVGRKEALEEQLSLATDTIKQLKHELSKKVQQLEVYDQDLQYQTCKDNLASVGGGDA 196
Query: 161 SLEAMTRRRQYGEV 174
SL+ ++Q G +
Sbjct: 195 SLKVEKLQKQVGSL 154
>04107
Length = 2502
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 19/86 (22%)
Frame = +1
Query: 132 IKQLDHAKR-HLTTSITTLNHLHML--------------AGGVDSLEAMTRRRQYGE--- 173
+ +LDH R HL T LNH+HM G + +L+ + RR + G
Sbjct: 502 VNRLDHDLREHLRPVTTRLNHVHMRMSIHFPELRLIQYDCGKLQTLDVLLRRLKTGSHRV 681
Query: 174 -VANLLQGVMNVLEHFHKYMGIPQIR 198
+ + +++VLE F Y G +R
Sbjct: 682 LIFTQMTKMLDVLEAFLNYHGHRYLR 759
>16285
Length = 819
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Frame = +3
Query: 640 SVILHIKQNVPIIRD--------NLASTRKYFTQFCIKFANSFIPKFITHLFKCKPISM 690
S ILH KQNV + R NLA + FCI F NS +P F K + +
Sbjct: 645 SDILHFKQNVHMFRQDFTLKEFHNLAKVQIMTINFCIHF-NSNVPLMFRQDFTLKDVML 818
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|126723336|ref|NP_031557.2| B-cell receptor-associated
protein 37 [Mus musculus]
(299 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07529 349 7e-97
20881 199 1e-56
30974 31 0.70
05679 30 1.5
>07529
Length = 1399
Score = 349 bits (896), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 169/243 (69%), Positives = 202/243 (83%)
Frame = +2
Query: 57 GVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQE 116
GVQ+D + EGLHFR+PWFQYPIIYDIR+RPRKI+SPTGSKDLQMVNISLRVLSRP A +
Sbjct: 5 GVQED-VYVEGLHFRVPWFQYPIIYDIRSRPRKITSPTGSKDLQMVNISLRVLSRPIASQ 181
Query: 117 LPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFS 176
LP +Y+ LG DY+ERVLPSI NEVLKSVVAKFNASQLITQR QVSLLIRRELTERAKDF+
Sbjct: 182 LPHVYRSLGTDYDERVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELTERAKDFN 361
Query: 177 LILDDVAITELSFSREYTXXXXXXXXXXXXXXXXXFLVEKAKQEQRQKIVQAEGEAEAAK 236
+ILDDV+ITELSF REYT FLVEKAKQE++QK+VQA+GEA+AAK
Sbjct: 362 IILDDVSITELSFGREYTAAVESKQVAQQEAQRAQFLVEKAKQEKQQKMVQADGEAQAAK 541
Query: 237 MLGEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQDESFTRGSDSLIK 296
++G+A+ NPG++KLRKIRAAQNIS+T+A SQNR+YL A L+LN+ ++ F +D++ K
Sbjct: 542 LIGQAVQANPGFLKLRKIRAAQNISRTVAQSQNRVYLNASALLLNIGEKEFDEAADAVSK 721
Query: 297 GKK 299
KK
Sbjct: 722 RKK 730
>20881
Length = 2017
Score = 199 bits (505), Expect(2) = 1e-56, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 140/203 (68%), Gaps = 1/203 (0%)
Frame = +1
Query: 72 IPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEER 131
IPW Q PII+D R+RPR + TGSKDLQ VNI+LR+L RP LP ++ LG DY+ER
Sbjct: 208 IPWVQKPIIFDCRSRPRNVPVVTGSKDLQNVNITLRILFRPQVPSLPKIFTNLGTDYDER 387
Query: 132 VLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSR 191
VLPSI NEVLK++VA+F+AS+LITQR VS + ELT+RA F L+LDD+++T L+F R
Sbjct: 388 VLPSITNEVLKAIVAQFDASELITQRELVSQKVSEELTDRALQFGLLLDDISLTHLTFGR 567
Query: 192 EYTXXXXXXXXXXXXXXXXXFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSK-NPGYIK 250
E+T F+VEKA+Q+++ ++ AEG++ AA+ L +A + G ++
Sbjct: 568 EFTEAVESKQVAQQEAERARFVVEKAEQQKKAAVISAEGDSLAAEQLAKAFGEAGEGLVE 747
Query: 251 LRKIRAAQNISKTIATSQNRIYL 273
LRK+ AA++I+ ++ S+N +YL
Sbjct: 748 LRKLEAAEDIAYQLSRSRNVVYL 816
Score = 38.5 bits (88), Expect(2) = 1e-56, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 38 ESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWF 75
+++ V+GGHRA+ F+R GV QD + EG H +P F
Sbjct: 107 SALYNVDGGHRAVIFDRFRGV-QDAVSGEGTH--VPRF 211
>30974
Length = 823
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 68 LHFRIPWFQYPIIYDIRARPRKISSPTGSKDL 99
L R+ W + ++Y +R + R+ISS T K L
Sbjct: 126 LWMRVDWSELMLLYQLRMKSRQISSSTSCKAL 31
>05679
Length = 876
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = -2
Query: 260 ISKTIATSQNRIYLTADNLVLNLQ 283
+ K +ATSQN+IY+ + LV+NL+
Sbjct: 713 LDKKLATSQNKIYVNLEYLVMNLK 642
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|189339262|ref|NP_079770.2| ATPase, H+ transporting,
lysosomal V1 subunit C1 [Mus musculus]
(382 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
22396 324 7e-97
34639 32 0.33
>22396
Length = 916
Score = 324 bits (830), Expect(3) = 7e-97, Method: Compositional matrix adjust.
Identities = 154/237 (64%), Positives = 189/237 (79%), Gaps = 3/237 (1%)
Frame = +3
Query: 147 KGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAE 206
KGNLQNLE+K GSLLTR+LA++VKK+ F+LDSEYL TLLV+VPK N NDW+ YE + +
Sbjct: 126 KGNLQNLEKKKTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKANANDWLANYEKITD 305
Query: 207 MVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMT 266
M+VPRS+ ++ ED D L NVTLF+K ++F+ ARE KFIVRDF YNEEE+ A K EMT
Sbjct: 306 MIVPRSTQLIKEDHDYCLFNVTLFKKVTEEFKLHARERKFIVRDFVYNEEELAAGKNEMT 485
Query: 267 RLSTDKKKQFGPLVRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVNFQAMLLQPNKK 326
+L TDKKKQFGPLVRWLKVNFSEAF A IH+KALRVFVESVLRYGLPVNFQA+L++PNKK
Sbjct: 486 KLMTDKKKQFGPLVRWLKVNFSEAFCALIHVKALRVFVESVLRYGLPVNFQAILIEPNKK 665
Query: 327 SVKKLREVLHELYKHLXXXXXXXXXXP---MDIPGLNLSQQEYYPYVYYKIDCNLLE 380
SVK+LR+VL++LY HL +DIPGL Q EYYPYV+YK++ +++E
Sbjct: 666 SVKRLRDVLNQLYGHLDGASAGGNVSSADNVDIPGLGFGQSEYYPYVFYKVNIDMVE 836
Score = 41.2 bits (95), Expect(3) = 7e-97, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +2
Query: 106 QWDMAKYPIKQSLKNISEII 125
QWDMAKYPIKQSL+NI++II
Sbjct: 2 QWDMAKYPIKQSLRNIADII 61
Score = 28.5 bits (62), Expect(3) = 7e-97, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 126 AKGVTQIDNDLKSRASAYNN 145
+K + QID DLK+++ AYNN
Sbjct: 61 SKQIGQIDGDLKTKSQAYNN 120
>34639
Length = 763
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 105 FQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSL--L 162
+ WD + + + SL NISEI A ++ + S +Y++ ++ L A ++ +
Sbjct: 249 YHWDTSDWAPRPSLPNISEIPAN---EVADSPASTPPSYDS-NEHVPMLASTTASAIDSM 416
Query: 163 TRSLAEIVKKDDFVLDSEYL 182
T ++ I D++ DSEY+
Sbjct: 417 THDISTIPDH-DYMTDSEYV 473
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|9789873|ref|NP_062622.1| methionine aminopeptidase 2
[Mus musculus]
(478 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
25432 345 2e-95
28444 132 4e-31
05442 90 2e-18
18700 35 0.075
>25432
Length = 557
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 160/184 (86%), Positives = 173/184 (94%)
Frame = -3
Query: 261 IDCAFTVTFNPKYDILLTAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTY 320
IDCAFT+ FNPKYD LL AVKDATNTGI+ AGIDVRLCDVGE IQEVMESYEVE+DGKTY
Sbjct: 552 IDCAFTLAFNPKYDQLLAAVKDATNTGIREAGIDVRLCDVGERIQEVMESYEVELDGKTY 373
Query: 321 QVKPIRNLNGHSIGPYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMEC 380
QVKPIRNLNGHS+G YRIHAGKTVPIVKGG+ATRMEEGEVYAIETFGSTGKGVVHDDME
Sbjct: 372 QVKPIRNLNGHSVGQYRIHAGKTVPIVKGGDATRMEEGEVYAIETFGSTGKGVVHDDMET 193
Query: 381 SHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGI 440
SHYMKNF+VGHVP+RL ++K LLNVIN NF TLAFCRRWLDRLG++KYLMALKNLCD+GI
Sbjct: 192 SHYMKNFEVGHVPLRLAKSKQLLNVINNNFSTLAFCRRWLDRLGQTKYLMALKNLCDVGI 13
Query: 441 VDPY 444
+DPY
Sbjct: 12 IDPY 1
>28444
Length = 623
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 78/98 (79%)
Frame = +1
Query: 110 KVQTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDF 169
K QTDPP++P+C+L+P+G FP+G+ C+YP QD +TA R T EEK+ALD+A ++ +
Sbjct: 328 KTQTDPPTIPVCELFPDGNFPEGEICKYPVDQDNQTAKDRFTDEEKRALDRAQTYLYQEM 507
Query: 170 REAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKL 207
R+A+EAHRQ RKY+ S+IKPGMTMI+ICE LE SRK+
Sbjct: 508 RQASEAHRQTRKYMQSYIKPGMTMIDICETLESTSRKM 621
>05442
Length = 1171
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 120/277 (43%), Gaps = 17/277 (6%)
Frame = +1
Query: 207 LIKENGLNAGLAFPTGCSLNNCAAHYTPNAGDTTV-LQYDDICKIDFGTHISGRIIDCAF 265
L K G G+AFPT S+NNC H++P D + L+ D+ KID G H+ G I A
Sbjct: 100 LQKGQGNEKGIAFPTCVSINNCICHFSPLKSDPDITLKDGDMVKIDLGAHVDGYIGVAAH 279
Query: 266 TVTFNPKYDI--------LLTAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDG 317
T+ D ++TA A ++ V + IQ+V E+
Sbjct: 280 TLVVGASKDKKVSGRKADVMTAAHMAVEAALRMVKPGNENDQVTDCIQKVAEA------- 438
Query: 318 KTYQVKPIRNLNGHSIGPYRIHAGKTVPIVKGGEATR-------MEEGEVYAIETFGSTG 370
Y KP+ + H + I K I EA R E EVYAI+ STG
Sbjct: 439 --YNCKPVEGMLSHQLLKDVIDGDKAF-IQNPSEAQRKDHDKCEFEVHEVYAIDVIISTG 609
Query: 371 KGVVHD-DMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYL 429
+G + D + Y K V +++ ++ L+ ++ FG + F R L+ E K
Sbjct: 610 EGKGRELDTRTTVYKKRDMV--YQLKMKASRQFLSETDKKFGLMPFSLRLLE--DEKKAK 777
Query: 430 MALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRP 466
M + G++ P+ L D +G AQF+ T++L P
Sbjct: 778 MGVVECVKHGLMQPFGVLFDREGEVVAQFKTTVILMP 888
>18700
Length = 1224
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 415 FCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTC 468
+C W +G Y +A G DPYPPLC + S H IL P C
Sbjct: 298 YCGAWCTGMGSDSYTLAACTXWS-GEGDPYPPLCSLPPSGHVYCHHRILKTPRC 456
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6754910|ref|NP_035078.1| nuclear distribution gene C
homolog [Mus musculus]
(332 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08585 344 3e-95
02763 110 6e-25
22648 69 2e-12
14697 45 3e-05
09499 42 3e-04
23848 28 4.6
>08585
Length = 2828
Score = 344 bits (883), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 177/345 (51%), Positives = 222/345 (64%), Gaps = 13/345 (3%)
Frame = -2
Query: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFN 60
M + ERFDGML+ MAQQ EGG+ EL+ TFF FL+RKTDFF G AE+L+ TF
Sbjct: 1855 MSNNADPERFDGMLMTMAQQCEGGIHELLGTFFGFLQRKTDFFTGTGSAQAEELVMSTFR 1676
Query: 61 HHNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXPGPQIKELTDEEAERLQ 116
H P+IKELTD EAE L+
Sbjct: 1675 KHQATAQKLKKEQMEKEKKKAEKKAKEREEAERKRKEAEQKTEEEPKIKELTDAEAEALE 1496
Query: 117 LEIDQKK---------DAEDQEAQLKNGSLDSPGXXXXXXXXXXXXXXXXXXXXPNLGNG 167
E+ QKK DAE Q+ + K + D PN GNG
Sbjct: 1495 KELSQKKQEPEISANGDAEPQKKEEKTKAADD--------XDEEEDEKDKGKIKPNDGNG 1340
Query: 168 ADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEV 227
ADLP Y+WTQTL E+++ +PF V+F LKGKD+VVDI ++H++ GLKG PP++DG++YN V
Sbjct: 1339 ADLPTYKWTQTLGEIEIRIPFNVNFPLKGKDLVVDIGKKHIKAGLKGHPPILDGDMYNSV 1160
Query: 228 KVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSM 287
K+EES+W IED K++ ++LEK+N+MEWW+R+VT+DPEINTKK+ PENSKLSDLD ETRSM
Sbjct: 1159 KIEESTWCIEDKKLLLINLEKVNQMEWWSRIVTTDPEINTKKVQPENSKLSDLDGETRSM 980
Query: 288 VEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332
VEKMMYDQRQK GLPTSDEQKK++++KKFM QHPEMDFSK KF+
Sbjct: 979 VEKMMYDQRQKERGLPTSDEQKKEDVMKKFMSQHPEMDFSKCKFS 845
>02763
Length = 2590
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 4/162 (2%)
Frame = +3
Query: 162 PNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPV--- 218
P NGA NY W+Q++ ++D+ V + LKGK V VDI ++ L V KG V
Sbjct: 555 PESYNGAVRDNYSWSQSITDVDVRVKVPKTV-LKGKAVQVDIAKKRLCVRYKGSDGVWEE 731
Query: 219 -VDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKL 277
V G+L E++ +ES W + G+ V ++LEK + WW+ + +P+INT+KI+ + +
Sbjct: 732 GVTGDLTWEIRPDESMWTLSPGQHVYINLEK-KEERWWDGVFVDEPKINTRKIDC-SRPI 905
Query: 278 SDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMD 319
+DLD E ++ +E+MM+++RQK MGLP S EQKK ++L++ D
Sbjct: 906 TDLDDEAQAKIEEMMFNERQKRMGLPQSHEQKKMDMLRQAWD 1031
>22648
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +2
Query: 162 PNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR 205
PN GNGADLP Y+WTQTL E+++ +PF V+F LKGKD+VVDI +
Sbjct: 182 PNDGNGADLPTYKWTQTLGEIEIRIPFNVNFPLKGKDLVVDIGK 313
>14697
Length = 553
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%)
Frame = +3
Query: 177 QTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLI 236
QTL E+++ V + GK V DI+ R L+V + G+ ++DGEL V ++S+W +
Sbjct: 3 QTLEEVNIEV--NTGKEITGKIVKCDIKPRQLKVVVSGEV-IIDGELNEVVHPDDSTWTV 173
Query: 237 EDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQR 296
ED KV+ + L K L T+D + S L+D
Sbjct: 174 EDRKVLRICLSK--------SLTTAD--------HCWKSLLTD----------------- 254
Query: 297 QKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332
L T DE +K+ L++F ++P DFS A
Sbjct: 255 AYPADLLTLDEMQKKLTLQRFQFENPGFDFSGASVT 362
>09499
Length = 855
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 10 FDGMLLAMAQQHEGGVQELVNTFFSFLR 37
FDGML+ MAQQ EGG+ EL+ TF F +
Sbjct: 1 FDGMLMTMAQQCEGGIHELLGTFLGFCK 84
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Frame = +2
Query: 22 EGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFNHHNQXXXXXXXXX----XXXX 77
EG + V+++ S ++TDFF G AE+L+ TF H
Sbjct: 41 EGFMSCWVHSWVS--AKETDFFTGTGSAQAEELVMSTFRKHQATAQKLKKEQMEKEKKKA 214
Query: 78 XXXXXXXXXXXXXXXXXXXXXXPGPQIKELTDEEAERLQLEIDQ 121
P+IKELTD EAE L+ E+ Q
Sbjct: 215 EKKAKEREEAERKRKEAEQKTEEEPKIKELTDAEAEALEKELSQ 346
>23848
Length = 717
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 17 MAQQHEGGVQELVNTF--FSFLRRKTDFFIGGEEGMAE 52
+ + EGG+ +L N+ FSF RRK F+ G G +E
Sbjct: 279 IIRNREGGMGKLGNSVIGFSFARRKVQRFVAGRLGDSE 392
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6755202|ref|NP_036101.1| proteasome beta 3 subunit
[Mus musculus]
(205 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09425 343 3e-95
06516 76 1e-14
00497 53 9e-08
14312 30 0.65
03425 28 2.8
>09425
Length = 1898
Score = 343 bits (879), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 155/205 (75%), Positives = 185/205 (90%)
Frame = -3
Query: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
MSI++YNG A++AMKGK+CVAIAADRRFG+QAQ V+ DF K+F MG L+IGL GLATDV
Sbjct: 1836 MSILAYNGAAIIAMKGKDCVAIAADRRFGVQAQTVSMDFDKVFEMGPHLFIGLPGLATDV 1657
Query: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
QTV+QRLKFRLNLYEL+E R+IKP T MSMV+NLLYE+RFGPY+ EPVIAGL+PKTFKP+
Sbjct: 1656 QTVSQRLKFRLNLYELRENRRIKPQTFMSMVSNLLYERRFGPYFVEPVIAGLEPKTFKPY 1477
Query: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
I S+DLIGCPMVT+DFVVSGTCSEQMYGMCESLWEP+++P+ LFETISQA++NA DRDAV
Sbjct: 1476 IASMDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDLEPDDLFETISQALMNAFDRDAV 1297
Query: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
SG G +V++IEKDK+T + LK RMD
Sbjct: 1296 SGWGGVVYIIEKDKVTKKLLKTRMD 1222
>06516
Length = 835
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%)
Frame = +1
Query: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
G +MA++ ++ V I AD R A + K+ + DR+Y +G A D Q +A
Sbjct: 118 TGTTIMAVEYEDGVVIGADSRTTTGAYIANRVTDKLTKVTDRIYCCRSGSAADTQAIADI 297
Query: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
+K+ L+ Y ++ G + + T ++ L Y+ R ++AG D +T + S+
Sbjct: 298 VKYHLDFYRMEMGEEPQVQTAANVFRELCYDNR-DSLTAGIIVAGWDKRTGGQ-VYSVP- 468
Query: 127 IGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVI 186
IG + F + G+ S +YG ++ ++P+M + + +SQA+ A++RD SG +
Sbjct: 469 IGGMLQRQPFAIGGSGSTYLYGYVDAQFKPSMKKDDCLKFVSQAVSLAINRDGSSGGIIR 648
Query: 187 VHVIEKDKITTRTL 200
+ VI K+ + TL
Sbjct: 649 MAVINKEGVERVTL 690
>00497
Length = 1184
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Frame = +3
Query: 60 VQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKP 119
V T+ + ++ RL ++ +++ ++ +M++ +LY +RF PYY ++AGLD + K
Sbjct: 3 VLTLTKVVETRLKMFSYIHNKEMDTSSVAAMLSTILYYRRFFPYYXYNIVAGLDTEG-KG 179
Query: 120 FICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFET--------ISQA- 170
+ S D +G + + G+ S S+ +P +D + + +SQA
Sbjct: 180 CVFSFDPVGS-YERETYRAGGSAS--------SMLQPLLDNQIGMKNQAGAKQVPLSQAK 332
Query: 171 --------MLNAVDRDAVSGMGVIVHVIEKDKITTRTLKARMD 205
+A +RD +G V++HV+ K +T T R D
Sbjct: 333 AVALVKDVFTSAAERDINTGDAVVIHVVSKQGVTKTTFPLRRD 461
>14312
Length = 1773
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 44 PMGDRLYIGLAGLATDVQTVAQRLKFRLNLY 74
P+ RLY+ LA A DV V+QRL+ +LY
Sbjct: 409 PLPQRLYLTLARAARDVPGVSQRLERPRHLY 501
>03425
Length = 933
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 136 FVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHVIEKDKI 195
FV G+ S E ++P+M + + + A+ + D SG + + VI KDK+
Sbjct: 93 FVTMGSGSLAAMATFEDRFKPDMSRDEAMKLVRDAIAAGIFNDLGSGSNIDLCVITKDKV 272
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|33468961|ref|NP_061368.1| tripartite motif protein 3
[Mus musculus]
(744 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03572 343 1e-94
03602 102 5e-22
11956 89 8e-18
29117 73 5e-13
07490 64 1e-10
20109 60 3e-09
20514 54 2e-07
18021 38 6e-06
27774 48 2e-05
27230 47 3e-05
13043 45 2e-04
14625 44 2e-04
33436 40 0.002
18540 40 0.003
20704 38 0.011
20092 38 0.015
10203 35 0.081
06811 34 0.19
03240 34 0.20
27368 34 0.23
14716 33 0.36
12312 33 0.44
18689 33 0.51
17930 32 0.64
23915 32 1.3
29288 32 1.3
07293 31 1.4
15938 31 1.6
27237 31 1.7
33593 31 1.7
31249 31 1.9
08613 30 3.7
14417 29 5.7
07523 29 6.7
16700 29 7.5
09947 29 7.6
27286 29 8.5
>03572
Length = 776
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 157/218 (72%), Positives = 185/218 (84%)
Frame = -1
Query: 527 GRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRN 586
GR G++QRPTGVAV NG+ +VADYDN+WVS+F+P+GK+ +KIG GRL GPKGVAVD N
Sbjct: 770 GRVAGKIQRPTGVAVTLNGNYLVADYDNKWVSVFAPDGKYISKIGTGRLQGPKGVAVDNN 591
Query: 587 GHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSV 646
GHIIVVDNK+ V FQ NGKL+ +FG RG D FAGPH+ A+ N+I+V+DFHNHSV
Sbjct: 590 GHIIVVDNKASSVLVFQNNGKLLHKFGSRGNEDYQFAGPHYAAITKNNDIIVSDFHNHSV 411
Query: 647 KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYI 706
KV+ +DG FLF FGS GEGNGQFNAPTGVAVD NG+I+VADWGNSRIQVFD++GSFLSY+
Sbjct: 410 KVFGSDGSFLFCFGSMGEGNGQFNAPTGVAVDPNGHILVADWGNSRIQVFDANGSFLSYV 231
Query: 707 NTSAEPLYGPQGLALTSDGHVVVADAGNHCFKAYRYLQ 744
NTSAEPLYGPQGL +TSDG VVVAD+GNHC K Y+YLQ
Sbjct: 230 NTSAEPLYGPQGLGVTSDGQVVVADSGNHCIKFYKYLQ 117
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = -1
Query: 471 ELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSP 530
+L+ + GSRG E +F + + I+V+D +N ++VF ++G F F FG G
Sbjct: 530 KLLHKFGSRGNEDYQFAGPHYAAITKNNDIIVSDFHNHSVKVFGSDGSFLFCFGSMGEGN 351
Query: 531 GQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG--AGRLMGPKGVAVDRNGH 588
GQ PTGVAVD NG I+VAD+ N + +F G F + + A L GP+G+ V +G
Sbjct: 350 GQFNAPTGVAVDPNGHILVADWGNSRIQVFDANGSFLSYVNTSAEPLYGPQGLGVTSDGQ 171
Query: 589 IIVVDNKSCCV 599
++V D+ + C+
Sbjct: 170 VVVADSGNHCI 138
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Frame = -1
Query: 469 EDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGR 528
+ + + ++G+ GR +G +GV+ ++G I+V D+ + VF N G+ +FG RG
Sbjct: 662 DGKYISKIGT-GRLQGP----KGVAVDNNGHIIVVDNKASSVLVFQNNGKLLHKFGSRGN 498
Query: 529 SPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAV 583
Q P A+ N DIIV+D+ N V +F +G F G+ G+ P GVAV
Sbjct: 497 EDYQFAGPHYAAITKNNDIIVSDFHNHSVKVFGSDGSFLFCFGSMGEGNGQFNAPTGVAV 318
Query: 584 DRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHN 643
D NGHI+V D + + F NG + + GP + V + ++VV D N
Sbjct: 317 DPNGHILVADWGNSRIQVFDANGSFLSYV---NTSAEPLYGPQGLGVTSDGQVVVADSGN 147
Query: 644 HSVKVYSADGEFLFKFGSH 662
H +K Y F F H
Sbjct: 146 HCIKFYKYLQ*FHLPFNKH 90
>03602
Length = 1190
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 114/243 (46%), Gaps = 14/243 (5%)
Frame = -3
Query: 501 VVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTN-GDIIVADYDNRWVSI 559
VV+DS + I VF + G+ K T + D D+ V+ + V +
Sbjct: 1185 VVSDSGSGRIFVFYSHGEVK----------------TTITCDCRIKDVAVSRRNEILVVV 1054
Query: 560 FSPEGKFKTKIGAGRLMG----------PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLV 609
P + G L+G P G+ NG ++ ++ VF F K
Sbjct: 1053 NKPSVALQIYTVTGHLLGEHGKFITHEDPHGITALANGGAVITSKQNQNVFIFTDQLKYS 874
Query: 610 GRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQF 669
+FG +G D +F P FV N++N+IVVTD N +V+V++ GE F+FG G G+F
Sbjct: 873 SKFGRKGTGDGYFHSPQFVTTNSRNQIVVTDDMNDNVQVFNWLGELKFRFGRSGSKPGEF 694
Query: 670 NAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPL---YGPQGLALTSDGH 726
P GVA DS+ N+ VAD GN R+Q F+ G + + + + L P +A+TS G
Sbjct: 693 VRPMGVATDSDDNMYVADSGNCRVQKFNCKGVYQNLVVSDTHCLGQDVXPVNVAVTSAGD 514
Query: 727 VVV 729
V V
Sbjct: 513 VAV 505
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Frame = -3
Query: 470 DELVF--RVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
D+L + + G +G G F + Q V+ S +IVV D N +QVF+ G+ KFRFG G
Sbjct: 891 DQLKYSSKFGRKGTGDGYFHSPQFVTTNSRNQIVVTDDMNDNVQVFNWLGELKFRFGRSG 712
Query: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGA-----GRLMGPKGVA 582
PG+ RP GVA D++ ++ VAD N V F+ +G ++ + + G+ + P VA
Sbjct: 711 SKPGEFVRPMGVATDSDDNMYVADSGNCRVQKFNCKGVYQNLVVSDTHCLGQDVXPVNVA 532
Query: 583 VDRNGHIIVV 592
V G + V+
Sbjct: 531 VTSAGDVAVL 502
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 4/191 (2%)
Frame = -3
Query: 548 IVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNK-SCCVFTFQPNG 606
+V+D + + +F G+ KT I + K VAV R I+VV NK S + + G
Sbjct: 1185 VVSDSGSGRIFVFYSHGEVKTTITCDCRI--KDVAVSRRNEILVVVNKPSVALQIYTVTG 1012
Query: 607 KLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGN 666
L+G G + PH + V+T N +V +++ ++ KFG G G+
Sbjct: 1011 HLLGEHGKFITHED----PHGITALANGGAVITSKQNQNVFIFTDQLKYSSKFGRKGTGD 844
Query: 667 GQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSF-LSYINTSAEP--LYGPQGLALTS 723
G F++P V +S I+V D N +QVF+ G + + ++P P G+A S
Sbjct: 843 GYFHSPQFVTTNSRNQIVVTDDMNDNVQVFNWLGELKFRFGRSGSKPGEFVRPMGVATDS 664
Query: 724 DGHVVVADAGN 734
D ++ VAD+GN
Sbjct: 663 DDNMYVADSGN 631
>11956
Length = 501
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 70/131 (53%)
Frame = -3
Query: 573 GRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNN 632
G P+G+AV + I+V D+ + V F NG V FG G + F VAVN
Sbjct: 490 GSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGVAVNR 311
Query: 633 KNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSR 692
+ ++ D +NH ++V G FL FGS G +G+FN P GV D+ G I V D N R
Sbjct: 310 IGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYPWGVTTDALGFIYVCDKENHR 131
Query: 693 IQVFDSSGSFL 703
+QVF S GSF+
Sbjct: 130 VQVFQSDGSFV 98
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Frame = -3
Query: 482 EKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAV 541
E G FT +G++ IVVADS+N +QVF + G F FG G G+ GVAV
Sbjct: 496 EPGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGVAV 317
Query: 542 DTNGDIIVADYDNRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAVDRNGHIIVVDNKS 596
+ G I+AD N + + P+G+F G+ G+ P GV D G I V D ++
Sbjct: 316 NRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYPWGVTTDALGFIYVCDKEN 137
Query: 597 CCVFTFQPNGKLVGRFGGRGATDRHFAGPHF 627
V FQ +G VG+FG G + PH+
Sbjct: 136 HRVQVFQSDGSFVGKFGSCGRGEGQLEHPHY 44
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Frame = -3
Query: 530 PGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAVD 584
PG P G+AV + I+VAD N V +F G F + G G GVAV+
Sbjct: 493 PGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGVAVN 314
Query: 585 RNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNH 644
R G I+ D + + P G+ + FG +G D F P V + I V D NH
Sbjct: 313 RIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYPWGVTTDALGFIYVCDKENH 134
Query: 645 SVKVYSADGEFLFKFGSHGEGNGQFNAP 672
V+V+ +DG F+ KFGS G G GQ P
Sbjct: 133 RVQVFQSDGSFVGKFGSCGRGEGQLEHP 50
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Frame = -3
Query: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 531
V G G +GEF L GV+ G+ ++AD N IQV +G+F FG +G + G
Sbjct: 385 FVKEFGEYGNGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADG 206
Query: 532 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAVDRN 586
+ P GV D G I V D +N V +F +G F K G+ G+L P
Sbjct: 205 KFNYPWGVTTDALGFIYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHP-------- 50
Query: 587 GHIIVVDNKSCCVFTFQ 603
H ++ +SC F F+
Sbjct: 49 -HYSRIEYESCYCFRFE 2
>29117
Length = 320
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +1
Query: 12 VQPMDKQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSIL 68
V+ + FL C +CL + PK+LPC HTFC CL+ Y+ + CP+C++T I+
Sbjct: 46 VEGLKDDFLTCPLCLQLFTEPKILPCQHTFCSHCLRKYLDHNTFLQWQCVCPLCKKTCIV 225
Query: 69 PEQGVSALQNNFFISSLM 86
E V+ L NNF I L+
Sbjct: 226 REGDVTKLPNNFLIVGLL 279
>07490
Length = 1665
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 47/253 (18%)
Frame = -2
Query: 32 PKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQTSILPEQ-------GVSALQNNFFISS 84
PK+LPC H FC+ CL ++ Q +CP CR I P + GV +L N +
Sbjct: 1652 PKLLPCGHHFCKACLLRWVESQGWRAACPFCRALIISPTKCVDSLVDGVESLPTNHGLEE 1473
Query: 85 LMEAMQ--QAPE------------------------GAHDPEDP----HPLSAV------ 108
L++A Q ++P G D D HP+ AV
Sbjct: 1472 LVKARQVVRSPNVCSRCDGSVEAVSYCIQCEAKMCPGCQDTHDQTTXGHPVEAVRTLTEA 1293
Query: 109 --AGRP-LSCPNHEGKTMEFYCEACETAMCGECRAGEHR-EHGTVLLRDVVEQHKAALQR 164
AG+ + C H + +YC + +T C +C +H G + + + ++ LQ
Sbjct: 1292 KLAGKHVVKCEKHPDRPANYYCRSHQTLACDQCAQDDHSCCSGYLAISKLGPLARSRLQE 1113
Query: 165 QLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLE 224
++ ++ L+ I L S + ER I+ AF+DLE L+ ++Q L+ L
Sbjct: 1112 TVDVMKQNAANLAYQIKL-AKYSYRETER------DINEAFDDLEDRLESQRQLLLDTLH 954
Query: 225 SICGAKQKVLQTQ 237
+ A L+T
Sbjct: 953 EMKDASTGSLETH 915
>20109
Length = 418
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = -1
Query: 13 QPMDKQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQ-SLTLSCPVCRQTSILPEQ 71
Q K+ + C++C + +R P+ LPC HTFC +CL + S T CPVCR +P
Sbjct: 358 QNASKERVTCTVCFEVFRDPRFLPCHHTFCLQCLADLASRSPSSTFPCPVCRHHVTVPHG 179
Query: 72 GVSALQNNFFI 82
VS Q NF++
Sbjct: 178 SVSTFQTNFYL 146
>20514
Length = 803
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 29/153 (18%)
Frame = -2
Query: 538 GVAVDTNGDIIVADYDNR-W----------------------VSIFSPEGKFKTKIGAGR 574
G+A+D +G+I + +R W + I P+G F K GAGR
Sbjct: 547 GLAIDNDGNIYIFHRGDRSWDQTSFDMNKHFTKQDQPITQNTILILGPDGVFVRKFGAGR 368
Query: 575 LMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGK-----LVGRFGGRGATDRHFAGPHFVA 629
P G+ VD G+I + D VF P G +G G HF P VA
Sbjct: 367 FFMPHGIEVDHAGNIWLTDVALHQVFRI-PAGSQEADLTLGERFVHGDDHTHFCQPSDVA 191
Query: 630 VNNKNEIVVTD-FHNHSVKVYSADGEFLFKFGS 661
V E V+D + N + +S DG+FL ++GS
Sbjct: 190 VLPSGEFFVSDGYCNSRIMKFSKDGQFLKQWGS 92
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Frame = -2
Query: 581 VAVDRNGHIIVVDN--KSCCVFTFQPNGKLVGRFG-GRGATDRHFAGPHFVAVNNKNEIV 637
+ D N H D + P+G V +FG GR F PH + V++ I
Sbjct: 481 TSFDMNKHFTKQDQPITQNTILILGPDGVFVRKFGAGR------FFMPHGIEVDHAGNIW 320
Query: 638 VTDFHNHSV-KVYSADGEFLFKFGS---HGEGNGQFNAPTGVAVDSNGNIIVAD-WGNSR 692
+TD H V ++ + E G HG+ + F P+ VAV +G V+D + NSR
Sbjct: 319 LTDVALHQVFRIPAGSQEADLTLGERFVHGDDHTHFCQPSDVAVLPSGEFFVSDGYCNSR 140
Query: 693 IQVFDSSGSFL 703
I F G FL
Sbjct: 139 IMKFSKDGQFL 107
>18021
Length = 485
Score = 37.7 bits (86), Expect(2) = 6e-06, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 55 LTLSCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAP 93
++ +CP C++ +PE+GV+A Q NF+I + E P
Sbjct: 118 VSFACPTCKKMVAVPEKGVAAFQTNFYIVTEREQPPATP 234
Score = 30.8 bits (68), Expect(2) = 6e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +3
Query: 107 AVAGRPLSCP-----NHEGKTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAA 161
A PL C E + F CE C+ MC CR R+H T++ + V HK+
Sbjct: 216 AATSHPLPCQMCEEVEDEARDAVFVCEKCQQRMCQPCR----RKHDTII--NKVANHKST 377
Query: 162 -LQRQLEAVRGRL 173
L+A RG +
Sbjct: 378 KYSPWLQAARGTM 416
>27774
Length = 448
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = -3
Query: 654 EFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSR 692
+F+ KFG +G +GQF P+GVA+DS +IVAD NSR
Sbjct: 119 QFVTKFGEYGNSHGQFTEPSGVAIDSENRLIVADTNNSR 3
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -3
Query: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDN 554
QF +FG G S GQ P+GVA+D+ +IVAD +N
Sbjct: 119 QFVTKFGEYGNSHGQFTEPSGVAIDSENRLIVADTNN 9
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 471 ELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNN 507
+ V + G G G+FT GV+ S R++VAD+NN
Sbjct: 119 QFVTKFGEYGNSHGQFTEPSGVAIDSENRLIVADTNN 9
>27230
Length = 583
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = -1
Query: 358 GSAELCAEITGPDGVRLAVPVVDHKNGTYELVYTARTEGDLLLSVLLYGQPVRGSPFRVR 417
G E+ A +T P G +L V + K+GTY ++YT EG L V G P+ GSPF+V
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 418 AL 419
A+
Sbjct: 67 AV 62
>13043
Length = 1574
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +3
Query: 328 TGEGLRQALVGQ-PASLTVTTKDKDGRLVRTGSAELCAEITGPDGVRLAVPVVDHKNGTY 386
+G G+R+++ PA TV T+D G A+L + PDG + ++++GTY
Sbjct: 507 SGPGVRRSVPASLPAQFTVDTRD-------AGVADLECMVQRPDGSFIKPYFQNNEDGTY 665
Query: 387 ELVYTARTEGDLLLSVLLYGQPVRGSPFRVRALRPGD 423
+++YT G + V GQ V SPF V A GD
Sbjct: 666 DVIYTPEDLGVYDIIVKYDGQDVPRSPFNVEATPLGD 776
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +3
Query: 329 GEGLRQALVGQ--PASLTVTTKDKDGRLVRTGSAELCAEITGP-DGVRLAVPVVDHKNGT 385
G GL + V PA TV +D G A L T P G + +V + G
Sbjct: 216 GPGLDASEVAANLPAVFTVDARD-------AGEAPLDVTFTDPLSGAQQEAEIVPVEEGL 374
Query: 386 YELVYTARTEGDLLLSVLLYGQPVRGSPFRVRALRPGDLPPSPDDVKRRVKSPG 439
Y+ Y R EG + V G+PV SPF ++ L P D K +V PG
Sbjct: 375 YQATYMPRAEGKCKVDVKYGGKPVPNSPFHMQVL------PGVDPSKVKVSGPG 518
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 380 DHKNGTYELVYTARTEGDLLLSVLLYGQPVRGSPFRVRALRPGD 423
D+++GT + Y G +SVL +P++ SPF V+ P D
Sbjct: 63 DNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVD 194
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 2/132 (1%)
Frame = +3
Query: 290 PHENAQLELVLEVDG--LRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTT 347
P + +++++ DG + RS N+ A T A + T R + + +TV
Sbjct: 681 PEDLGVYDIIVKYDGQDVPRSPFNVEA--TPLGDASQCRITDGAERVIPIEKETVITVDA 854
Query: 348 KDKDGRLVRTGSAELCAEITGPDGVRLAVPVVDHKNGTYELVYTARTEGDLLLSVLLYGQ 407
D G + I P G + + +VD +GT+ + + + G+ ++ + G
Sbjct: 855 AD-------AGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEYIIEIKFGGN 1013
Query: 408 PVRGSPFRVRAL 419
V + A+
Sbjct: 1014FVPDGQYTAEAV 1049
>14625
Length = 846
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%)
Frame = +3
Query: 113 LSCPNHEGKTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGR 172
+ C H + + +CE CE C +C+ +H+EH L++ E +KA L L ++ R
Sbjct: 252 MLCRVHPKEKLTLFCEKCEVLTCRDCQLLQHQEHKYQFLQEAAESYKAKLTGSLSLMKDR 431
Query: 173 LPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLESICGAKQK 232
L + +++ K + I + + +A++ A++S L S A K
Sbjct: 432 REVLWRYQTEIEERLSKVKREKNDLQQDILRQADVIVKAVRTAVWAVLSSLHSFTDAAAK 611
Query: 233 VLQTQLDTLR 242
L ++ +R
Sbjct: 612 RLSREVGDVR 641
>33436
Length = 583
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -1
Query: 20 LVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQT 65
L CSICL+ P C H FC C+ ++ + ++ CP+C+ T
Sbjct: 406 LECSICLELMTSPVATKCEHYFCRFCITEFLEKKR-SVPCPLCKAT 272
>18540
Length = 988
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Frame = +3
Query: 621 HFAGPHFVAVNNKNEIVVTD-FHNHSVKVYSADGEFLFKFGSHGEGNGQ-------FNAP 672
HF P VAV + V+D + N V +S +G L ++G + + F P
Sbjct: 78 HFCKPTDVAVLASGDFFVSDGYCNSRVMKFSKEGNLLKQWGRPDQFRARIQPQPNVFTIP 257
Query: 673 TGVAVDSNGNII-VADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLAL 721
+A+ + N++ VAD N RIQ FD G+F I +GP+ A+
Sbjct: 258 HSLALAEDLNLVCVADRENGRIQCFDLDGTFKFIIQHQQ---FGPRLFAI 398
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Frame = +3
Query: 500 IVVADSNNQCIQVFSNEGQFKF-----RFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDN 554
+ VAD N IQ F +G FKF +FG R + R G+ NG D +
Sbjct: 291 VCVADRENGRIQCFDLDGTFKFIIQHQQFGPRLFAIEYCPRHGGLLYAVNGPTF--DGET 464
Query: 555 RWVSIFSPEGKFKTKI-------GAGRLMGPKGVAVDRNGHIIVV-DNKSCCVFTFQ 603
V F+ + T + G G L P VAVD GH + V + V+ FQ
Sbjct: 465 STVQGFTIRVRDNTLLETWTLPTGQG-LQNPHDVAVDVEGHAVYVGELNPSSVWKFQ 632
>20704
Length = 874
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = -1
Query: 16 DKQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQTSILPEQG--- 72
DK C +C + Y K+LPC HT C +C+ ++ CP+CR + P
Sbjct: 352 DKSEFECPVCHEDYDQHKILPCKHTACHKCILTWLQKGGRNRGCPLCRVPILSPSTAHHD 173
Query: 73 ----VSALQNNFFISSLMEAMQQAPEGAH 97
V AL + +E QQ +G H
Sbjct: 172 LKLLVDALPTGLVVEIQIEN-QQLLKGPH 89
>20092
Length = 467
Score = 37.7 bits (86), Expect = 0.015, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 516 EGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAG-R 574
+G F+ R + G PTGV V++ GD+IVAD N V I + G+ K GA +
Sbjct: 250 DGLFEIRAKCVEKIRGDFDHPTGVCVNSKGDVIVADTANHVVKICN-NGRVIKKFGADLK 426
Query: 575 LMGPKGVAVD 584
+ P V V+
Sbjct: 427 MWRPSAVVVN 456
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 649 YSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
+ DG F + + G F+ PTGV V+S G++IVAD N +++
Sbjct: 241 HVGDGLFEIRAKCVEKIRGDFDHPTGVCVNSKGDVIVADTANHVVKI 381
Score = 32.0 bits (71), Expect = 0.96, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +1
Query: 483 KGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVD 542
+G+F + GV S G ++VAD+ N +++ N G+ +FG + ++ RP+ V V+
Sbjct: 292 RGDFDHPTGVCVNSKGDVIVADTANHVVKI-CNNGRVIKKFG----ADLKMWRPSAVVVN 456
>10203
Length = 2103
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 22 CSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQT 65
C+IC + + LPC H F CL++++ + SCP CR +
Sbjct: 1109 CAICWEGMEAARKLPCGHLFHNSCLRSWLEQDT---SCPTCRMS 987
>06811
Length = 674
Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = -2
Query: 171 GRLPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLESICGAK 230
G + L+AA V +QL+ L I+ +F+D+ + +R+ + + I K
Sbjct: 436 GAIKNLNAAYDAVSEELRQLELSVDRTLDGINRSFQDVIAVVDRRRHECLQWVRKIKEEK 257
Query: 231 QKVLQTQLDTLRQGQEHIGSSC 252
+ VL+ QLD ++ ++ + S C
Sbjct: 256 KNVLKEQLDLIQAEKDKVQSEC 191
>03240
Length = 1683
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -3
Query: 574 RLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATD 619
R + P + +DRNGHI + D C F + N K R G D
Sbjct: 919 RDIKPDNILIDRNGHIKLTDFGLCTGFRWTHNSKYYQRDGTHARQD 782
>27368
Length = 394
Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 20 LVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQ 64
L+C +C P C HTFC CL++++ Q+L CP +Q
Sbjct: 4 LLCQLCHQPLVDPLETKCGHTFCTSCLKSHLAVQAL---CPEDKQ 129
>14716
Length = 481
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 20 LVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQTSILPEQGVSALQN 78
L CS+CL R + C H FC C+ + ++ CP+CR+ P + ALQN
Sbjct: 146 LKCSLCLGPRRRTTLTVCGHLFCWDCIHQWCQEKA---ECPLCREQ--FPPHRLVALQN 307
>12312
Length = 477
Score = 33.1 bits (74), Expect = 0.44, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -3
Query: 15 MDKQFLVCSICLDR--YRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQTSILPEQG 72
MD Q++ +C+D Y C V C+H C+ + +P S+T + R I +
Sbjct: 223 MDSQYVFVYMCVDVCVYLCVCVHLCVHVCMY*CVNSLLPNCSMTFKPNIGRGICIKHYEV 44
Query: 73 VSALQNNFFISSL 85
SA +FF+S
Sbjct: 43 TSATVLSFFLSKF 5
>18689
Length = 723
Score = 32.7 bits (73), Expect = 0.51, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 25 CLDRYRCPKVLPCLHTFCERCL 46
CL +YR LPCLHT CE C+
Sbjct: 104 CLTKYR--NFLPCLHTMCEDCI 163
>17930
Length = 798
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 6 DSPGPEVQPMDKQF-LVCSICLDRYRCPKVLPCLHTFCERC 45
D+ E+ D+ F C IC + P V C H +CE+C
Sbjct: 149 DNQNYEISSEDEDFPFKCFICRKSFVNPVVTKCKHYYCEKC 27
>23915
Length = 1006
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Frame = +1
Query: 507 NQCIQVFS-----NEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFS 561
NQ I +FS + KF F P VAV NGDIIV+D R++ IFS
Sbjct: 136 NQSIHLFSFKILKKDAANKFLF----------LSPMDVAVAGNGDIIVSDA-GRFIQIFS 282
Query: 562 PE----GKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNK 595
+ +++ + L GV D G + + D K
Sbjct: 283 SDFVLKKSYQSPLADSELW---GVCTDPGGSVYIADWK 387
>29288
Length = 421
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -1
Query: 32 PKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQTSILPEQGVS 74
P +L C H+FC+ CL+ + T+ CP C++ + L + V+
Sbjct: 400 PMLLRCGHSFCKPCLRKCETTED-TIQCPTCQKPTRLSLKTVN 275
>07293
Length = 3312
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -3
Query: 151 LRDVVEQHKAALQRQLEAVRGRLPQLSA 178
LR V+QH AALQ Q + ++G + QLSA
Sbjct: 3181 LRQQVDQHDAALQSQFDHLQGAVQQLSA 3098
>15938
Length = 752
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 4 REDSPGPEVQPMDKQF-LVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVC 62
+ D+ E+ D+ F C IC + P V C H +CE+C + T C VC
Sbjct: 175 QNDNQNYEISSEDEDFPFKCFICRKSFVNPVVTKCKHYYCEKCA---LAQYKKTQRCFVC 345
Query: 63 RQTS 66
Q +
Sbjct: 346 GQQT 357
>27237
Length = 704
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = -1
Query: 115 CPNHEGKTMEFYCEACETAMCGECRAGEHREHGTVLLRDV---VEQHKAALQRQLEAVRG 171
C +H ++ + YC A ++C C A HR V RD+ E+ +A L++ + +
Sbjct: 425 CASHPDESCQLYCTAHSVSICHLCAASVHRNCSEV--RDIHGRAEEARAELKKMADKLSA 252
Query: 172 RLPQLSAAIALVGGISQQLQERKAEA 197
Q++ I + Q++ E+K EA
Sbjct: 251 GESQINERINKIDDSLQKM-EKKGEA 177
>33593
Length = 559
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -3
Query: 10 PEVQPMDKQ-----FLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQ 64
P +Q +Q + C +C D P + C+H FC C+ + + + +CP C Q
Sbjct: 431 PSIQTXCQQRSRADLMECVVCGDWPIHPHHIGCIHXFCYFCIASNLKADP-SYTCPACGQ 255
>31249
Length = 543
Score = 30.8 bits (68), Expect = 1.9, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 21 VCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCR 63
VC++CL +V C H F C++ + S CP+C+
Sbjct: 343 VCAVCLGSMGXARVTRCHHLFHAXCIRQLLEVSS---HCPLCK 224
>08613
Length = 973
Score = 30.0 bits (66), Expect = 3.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 31 CPKVL-PCLHTFCERCLQNYIPPQSLTLSCPVCRQ 64
CP V C H F C+ ++ Q + CP+CRQ
Sbjct: 8 CPLVWGQCSHCFHIHCIVKWLNSQQVHQPCPMCRQ 112
>14417
Length = 1383
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 10 PEVQPMDKQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQTSILP 69
P+V+ M V S+ + PK LPC H FC CL + CP C++ +P
Sbjct: 467 PQVKLMSLTDAVPSVWKKKSHNPK-LPCGHRFCASCLDRAM---INNPRCPKCQRLYGIP 634
>07523
Length = 1299
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 22 CSICLDRYRCPKVLPCLH-TFCERCLQNYIPPQSLTLSCPVCR 63
C IC+ R +LPC H C C ++ S+ CP+CR
Sbjct: 456 CVICMSDMRDTLILPCRHLCLCSACAESLRYQASM---CPICR 337
>16700
Length = 1234
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 27 DRYRCPKVLPCLHTFCE 43
DR+ CP LPCL FC+
Sbjct: 361 DRFTCPPTLPCLLIFCQ 311
>09947
Length = 860
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -1
Query: 507 NQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFS 561
NQ ++V E F + Q QR VAVD NGD+ V Y+ R ++F+
Sbjct: 617 NQTLEV---EDSLTFTW--------QDQRGESVAVDPNGDVYVMSYEERGDAMFA 486
>27286
Length = 454
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 109 AGRPLSCPNHEGKTMEFYCEACETAMC-GECRAGEHREHG 147
G P P H GKT + +AC+TA C CR G H HG
Sbjct: 333 CGTPARAPEHSGKT---F*QACQTAACDSSCRRGCHVGHG 443
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|14010849|ref|NP_109631.1| tripartite motif protein 2
[Mus musculus]
(744 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03572 342 2e-94
03602 105 7e-23
11956 100 4e-21
29117 74 1e-13
20109 66 5e-11
07490 57 3e-08
32269 53 4e-07
17351 51 1e-06
27774 46 6e-05
18021 41 8e-05
13043 45 1e-04
19277 44 2e-04
14625 43 4e-04
20514 42 8e-04
33436 42 8e-04
20704 42 0.001
16231 40 0.004
20092 40 0.004
27230 39 0.008
18540 39 0.011
14716 38 0.012
10203 37 0.020
29755 37 0.024
27368 36 0.053
29288 35 0.14
33593 34 0.21
18689 34 0.24
15938 34 0.24
03240 33 0.37
17930 33 0.57
14417 32 0.67
21436 32 1.1
31249 32 1.3
00178 31 1.7
07523 31 1.7
27069 30 2.9
26463 30 3.4
23915 29 6.0
>03572
Length = 776
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 157/218 (72%), Positives = 188/218 (86%)
Frame = -1
Query: 527 GRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGSGKLMGPKGVSVDRN 586
GR G++QRPTGVAV +G+ ++ADYDNKWVS+F+ DGK+ +KIG+G+L GPKGV+VD N
Sbjct: 770 GRVAGKIQRPTGVAVTLNGNYLVADYDNKWVSVFAPDGKYISKIGTGRLQGPKGVAVDNN 591
Query: 587 GHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSV 646
GHIIVVDNKA V +FQ NGK++ +FGSRGN D QFAGPH+AA+ NN+II++DFHNHSV
Sbjct: 590 GHIIVVDNKASSVLVFQNNGKLLHKFGSRGNEDYQFAGPHYAAITKNNDIIVSDFHNHSV 411
Query: 647 KVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYI 706
KVF +G F+ FGS GEGNGQFNAPTGVAVD NG+I+VADWGNSRIQVFD +GSFLSY+
Sbjct: 410 KVFGSDGSFLFCFGSMGEGNGQFNAPTGVAVDPNGHILVADWGNSRIQVFDANGSFLSYV 231
Query: 707 NTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ 744
NTSA+PLYGPQGL +TSDG VVVADSGNHC K Y+YLQ
Sbjct: 230 NTSAEPLYGPQGLGVTSDGQVVVADSGNHCIKFYKYLQ 117
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 5/224 (2%)
Frame = -1
Query: 478 TKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPT 537
+ GR G+ GVA + +G L+AD +N+ V +F+ DG++ S+ G G+LQ P
Sbjct: 776 SAGRVAGKIQRPTGVAVTLNGNYLVADYDNKWVSVFAPDGKYISKIGT-----GRLQGPK 612
Query: 538 GVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGSG-----KLMGPKGVSVDRNGHIIVV 592
GVAV +G II+ D V +F N+GK K GS + GP ++ +N IIV
Sbjct: 611 GVAVDNNGHIIVVDNKASSVLVFQNNGKLLHKFGSRGNEDYQFAGPHYAAITKNNDIIVS 432
Query: 593 DNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQE 652
D V +F +G + FGS G G+ QF P AV+ N I++ D+ N ++VF+
Sbjct: 431 DFHNHSVKVFGSDGSFLFCFGSMGEGNGQFNAPTGVAVDPNGHILVADWGNSRIQVFDAN 252
Query: 653 GEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVF 696
G F+ ++ E P G+ V S+G ++VAD GN I+ +
Sbjct: 251 GSFLSYVNTSAE---PLYGPQGLGVTSDGQVVVADSGNHCIKFY 129
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
Frame = -1
Query: 473 IFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQ 532
I ++GT GR +G +GVA +G I++ D+ V +F N+G+ +FG RG Q
Sbjct: 650 ISKIGT-GRLQGP----KGVAVDNNGHIIVVDNKASSVLVFQNNGKLLHKFGSRGNEDYQ 486
Query: 533 LQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS-----GKLMGPKGVSVDRNG 587
P A+ + DII++D+ N V +F +DG F GS G+ P GV+VD NG
Sbjct: 485 FAGPHYAAITKNNDIIVSDFHNHSVKVFGSDGSFLFCFGSMGEGNGQFNAPTGVAVDPNG 306
Query: 588 HIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVK 647
HI+V D + +F NG ++ + GP V S+ ++++ D NH +K
Sbjct: 305 HILVADWGNSRIQVFDANGSFLSYVNTSA---EPLYGPQGLGVTSDGQVVVADSGNHCIK 135
Query: 648 VFNQEGEFMLKF 659
+ F L F
Sbjct: 134 FYKYLQ*FHLPF 99
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Frame = -1
Query: 472 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 531
L+ + G++G +F A + + I+++D +N V++F +DG F FG G G
Sbjct: 527 LLHKFGSRGNEDYQFAGPHYAAITKNNDIIVSDFHNHSVKVFGSDGSFLFCFGSMGEGNG 348
Query: 532 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGSGK--LMGPKGVSVDRNGHI 589
Q PTGVAV P+G I++AD+ N + +F +G F + + + L GP+G+ V +G +
Sbjct: 347 QFNAPTGVAVDPNGHILVADWGNSRIQVFDANGSFLSYVNTSAEPLYGPQGLGVTSDGQV 168
Query: 590 IVVDNKACCVFIFQ 603
+V D+ C+ ++
Sbjct: 167 VVADSGNHCIKFYK 126
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = -1
Query: 661 SNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLA 720
S G G+ PTGVAV NGN +VAD+ N + VF G ++S I T L GP+G+A
Sbjct: 776 SAGRVAGKIQRPTGVAVTLNGNYLVADYDNKWVSVFAPDGKYISKIGTGR--LQGPKGVA 603
Query: 721 LTSDGHVVVADS 732
+ ++GH++V D+
Sbjct: 602 VDNNGHIIVVDN 567
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%)
Frame = -1
Query: 469 EDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGR 528
+ +F G+ G G+F GVA +G IL+AD N +Q+F +G F S
Sbjct: 395 DGSFLFCFGSMGEGNGQFNAPTGVAVDPNGHILVADWGNSRIQVFDANGSFLSYV---NT 225
Query: 529 SPGQLQRPTGVAVHPSGDIIIADYDNKWVSIF 560
S L P G+ V G +++AD N + +
Sbjct: 224 SAEPLYGPQGLGVTSDGQVVVADSGNHCIKFY 129
>03602
Length = 1190
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Frame = -3
Query: 578 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEII 637
P G++ NG ++ + VFIF K ++FG +G GD F P F NS N+I+
Sbjct: 969 PHGITALANGGAVITSKQNQNVFIFTDQLKYSSKFGRKGTGDGYFHSPQFVTTNSRNQIV 790
Query: 638 ITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFD 697
+TD N +V+VFN GE +FG +G G+F P GVA DS+ N+ VAD GN R+Q F+
Sbjct: 789 VTDDMNDNVQVFNWLGELKFRFGRSGSKPGEFVRPMGVATDSDDNMYVADSGNCRVQKFN 610
Query: 698 GSGSFLSYINTSADPL---YGPQGLALTSDGHVVV 729
G + + + + L P +A+TS G V V
Sbjct: 609 CKGVYQNLVVSDTHCLGQDVXPVNVAVTSAGDVAV 505
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Frame = -3
Query: 548 IIADYDNKWVSIFSNDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVF-IFQPNG 606
+++D + + +F + G+ KT I + K V+V R I+VV NK I+ G
Sbjct: 1185 VVSDSGSGRIFVFYSHGEVKTTITCDCRI--KDVAVSRRNEILVVVNKPSVALQIYTVTG 1012
Query: 607 KIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGN 666
++ G + PH +N +IT N +V +F + ++ KFG G G+
Sbjct: 1011 HLLGEHGKFITHED----PHGITALANGGAVITSKQNQNVFIFTDQLKYSSKFGRKGTGD 844
Query: 667 GQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSF-LSYINTSADP--LYGPQGLALTS 723
G F++P V +S I+V D N +QVF+ G + + + P P G+A S
Sbjct: 843 GYFHSPQFVTTNSRNQIVVTDDMNDNVQVFNWLGELKFRFGRSGSKPGEFVRPMGVATDS 664
Query: 724 DGHVVVADSGN------HCFKVYRYL 743
D ++ VADSGN +C VY+ L
Sbjct: 663 DDNMYVADSGNCRVQKFNCKGVYQNL 586
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Frame = -3
Query: 475 RVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQ 534
+ G KG G F + Q V ++ +I++ D N VQ+F+ G+ K RFG G PG+
Sbjct: 870 KFGRKGTGDGYFHSPQFVTTNSRNQIVVTDDMNDNVQVFNWLGELKFRFGRSGSKPGEFV 691
Query: 535 RPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS-----GKLMGPKGVSVDRNGHI 589
RP GVA ++ +AD N V F+ G ++ + S G+ + P V+V G +
Sbjct: 690 RPMGVATDSDDNMYVADSGNCRVQKFNCKGVYQNLVVSDTHCLGQDVXPVNVAVTSAGDV 511
Query: 590 IVV 592
V+
Sbjct: 510 AVL 502
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = -3
Query: 471 DLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSP 530
+L FR G G GEF GVA + + +ADS N VQ F+ G +++
Sbjct: 741 ELKFRFGRSGSKPGEFVRPMGVATDSDDNMYVADSGNCRVQKFNCKGVYQNLVVSDTHCL 562
Query: 531 GQLQRPTGVAVHPSGDIII 549
GQ P VAV +GD+ +
Sbjct: 561 GQDVXPVNVAVTSAGDVAV 505
>11956
Length = 501
Score = 99.8 bits (247), Expect = 4e-21, Method: Composition-based stats.
Identities = 52/131 (39%), Positives = 73/131 (55%)
Frame = -3
Query: 573 GKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNS 632
G P+G++V + I+V D+ V +F NG V FG GNG+ +F AVN
Sbjct: 490 GSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGVAVNR 311
Query: 633 NNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSR 692
+ II D +NH ++V + +G F+ FGS G +G+FN P GV D+ G I V D N R
Sbjct: 310 IGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYPWGVTTDALGFIYVCDKENHR 131
Query: 693 IQVFDGSGSFL 703
+QVF GSF+
Sbjct: 130 VQVFQSDGSFV 98
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
Frame = -3
Query: 484 GEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHP 543
G FT +G+A I++ADS+N VQ+F ++G F FG G G+ GVAV+
Sbjct: 490 GSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGVAVNR 311
Query: 544 SGDIIIADYDNKWVSIFSNDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVVDNKACC 598
G IIAD N + + G+F GS GK P GV+ D G I V D +
Sbjct: 310 IGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYPWGVTTDALGFIYVCDKENHR 131
Query: 599 VFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAV 630
V +FQ +G V +FGS G G+ Q PH++ +
Sbjct: 130 VQVFQSDGSFVGKFGSCGRGEGQLEHPHYSRI 35
Score = 92.4 bits (228), Expect = 6e-19, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Frame = -3
Query: 530 PGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS-----GKLMGPKGVSVD 584
PG P G+AV P I++AD N V +F ++G F + G G+ GV+V+
Sbjct: 493 PGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGVAVN 314
Query: 585 RNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNH 644
R G I+ D + + P G+ + FGS+G D +F P ++ I + D NH
Sbjct: 313 RIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYPWGVTTDALGFIYVCDKENH 134
Query: 645 SVKVFNQEGEFMLKFGSNGEGNGQFNAP 672
V+VF +G F+ KFGS G G GQ P
Sbjct: 133 RVQVFQSDGSFVGKFGSCGRGEGQLEHP 50
Score = 68.6 bits (166), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Frame = -3
Query: 477 GTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRP 536
G G +GEF L GVA + G+ +IAD N +Q+ G+F FG +G + G+ P
Sbjct: 370 GEYGNGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYP 191
Query: 537 TGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIV 591
GV G I + D +N V +F +DG F K GS G+L P H
Sbjct: 190 WGVTTDALGFIYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHP---------HYSR 38
Query: 592 VDNKACCVFIFQ 603
++ ++C F F+
Sbjct: 37 IEYESCYCFRFE 2
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 716 PQGLALTSDGHVVVADSGNHCFKVY 740
P+GLA+ D +VVADS NH +V+
Sbjct: 475 PRGLAVGPDNSIVVADSSNHRVQVF 401
>29117
Length = 320
Score = 74.3 bits (181), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +1
Query: 13 VRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
V + FL C +CL+ + PK+LPC HTFC CL+ Y+ ++ CP+C++T I+
Sbjct: 46 VEGLKDDFLTCPLCLQLFTEPKILPCQHTFCSHCLRKYLDHNTFLQWQCVCPLCKKTCIV 225
Query: 70 PEKGVAALQNNFFITNLMDVLQ 91
E V L NNF I L+ ++
Sbjct: 226 REGDVTKLPNNFLIVGLLHFVK 291
>20109
Length = 418
Score = 65.9 bits (159), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = -1
Query: 18 KQFLICSICLERYKNPKVLPCLHTFCERCLQNYIP-AHSLTLSCPVCRQTSILPEKGVAA 76
K+ + C++C E +++P+ LPC HTFC +CL + + S T CPVCR +P V+
Sbjct: 346 KERVTCTVCFEVFRDPRFLPCHHTFCLQCLADLASRSPSSTFPCPVCRHHVTVPHGSVST 167
Query: 77 LQNNFFI 83
Q NF++
Sbjct: 166 FQTNFYL 146
>07490
Length = 1665
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 98/245 (40%), Gaps = 51/245 (20%)
Frame = -2
Query: 30 YKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLMDV 89
+ PK+LPC H FC+ CL ++ + +CP CR I P K V +L+D
Sbjct: 1661 FVEPKLLPCGHHFCKACLLRWVESQGWRAACPFCRALIISPTKCV---------DSLVDG 1509
Query: 90 LQRTPGSNGEDSSILETVTAVAAGK-PLSCPNHDGNVMEF-YCQSCETAMCRECTE---- 143
++ P ++G + E V A + P C DG+V YC CE MC C +
Sbjct: 1508 VESLPTNHG----LEELVKARQVVRSPNVCSRCDGSVEAVSYCIQCEAKMCPGCQDTHDQ 1341
Query: 144 -------------------GEHA----EHPTVPLKDVVEQHK--ASLQVQLD-------- 170
G+H +HP P H+ A Q D
Sbjct: 1340 TTXGHPVEAVRTLTEAKLAGKHVVKCEKHPDRPANYYCRSHQTLACDQCAQDDHSCCSGY 1161
Query: 171 -AVNK-------RLPE-IDSALQFISEIIHQLTNQKASIVD---DIHSTFDELQKTLNVR 218
A++K RL E +D Q + + +Q+ K S + DI+ FD+L+ L +
Sbjct: 1160 LAISKLGPLARSRLQETVDVMKQNAANLAYQIKLAKYSYRETERDINEAFDDLEDRLESQ 981
Query: 219 KSVLL 223
+ +LL
Sbjct: 980 RQLLL 966
>32269
Length = 555
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Frame = -3
Query: 599 VFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLK 658
VF+ G +V F + P AV SN E + DF H V VFN+EG F+ +
Sbjct: 520 VFVITEGGDLVKWF----DCSDYMREPSDIAV-SNKEYFVCDFKGHCVVVFNEEGSFVRR 356
Query: 659 FGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSR--IQVFDGSGSFLSYINTSADPLYGP 716
G N P G+ + G++++ D +R + VF GS +
Sbjct: 355 IGC----ENITNYPNGIDLSDAGDVLIGDSHGNRFHVAVFQRDGSLTGEFQCPYVKVSRC 188
Query: 717 QGLALTSDGHVVVADSGNH 735
GL +TS+G++V NH
Sbjct: 187 CGLKITSEGYIVTLAKNNH 131
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = -3
Query: 494 ASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIAD-Y 552
A ++ + + D CV +F+ +G F R G + P G+ + +GD++I D +
Sbjct: 442 AVSNKEYFVCDFKGHCVVVFNEEGSFVRRIGCENIT----NYPNGIDLSDAGDVLIGDSH 275
Query: 553 DNKW-VSIFSNDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVT 610
N++ V++F DG +G+ P V V R CC G IVT
Sbjct: 274 GNRFHVAVFQRDGSL-----TGEFQCPY-VKVSR-----------CCGLKITSEGYIVT 149
>17351
Length = 654
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%)
Frame = -1
Query: 330 ATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDNKNGTY 389
A G GL + ++G+P + T++ G L + P S AD E D K+G+
Sbjct: 432 AGGSGLERGVVGEPAEFNVWTRE-------AGGGSLAISVEGP--SKADIEFKDRKDGSC 280
Query: 390 EFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKV 421
+ Y V + G++ + L+ D+HI SPFK+ +
Sbjct: 279 DVSYKVTEPGEYRVGLKFNDRHIPDSPFKVYI 184
>27774
Length = 448
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 654 EFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSR 692
+F+ KFG G +GQF P+GVA+DS +IVAD NSR
Sbjct: 119 QFVTKFGEYGNSHGQFTEPSGVAIDSENRLIVADTNNSR 3
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 518 QFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDN 554
QF ++FG G S GQ P+GVA+ +I+AD +N
Sbjct: 119 QFVTKFGEYGNSHGQFTEPSGVAIDSENRLIVADTNN 9
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 472 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNN 507
+ + G G + G+FT GVA + ++++AD+NN
Sbjct: 116 FVTKFGEYGNSHGQFTEPSGVAIDSENRLIVADTNN 9
>18021
Length = 485
Score = 41.2 bits (95), Expect(2) = 8e-05, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 56 LTLSCPVCRQTSILPEKGVAALQNNFFITNLMDVLQRTP 94
++ +CP C++ +PEKGVAA Q NF+I + TP
Sbjct: 118 VSFACPTCKKMVAVPEKGVAAFQTNFYIVTEREQPPATP 234
Score = 23.5 bits (49), Expect(2) = 8e-05, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 128 FYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKAS 164
F C+ C+ MC+ C +H T+ K V HK++
Sbjct: 285 FVCEKCQQRMCQPCRR----KHDTIINK--VANHKST 377
>13043
Length = 1574
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +3
Query: 326 SETVATGEGLRQTIIGQ-PMSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDN 384
S+ +G G+R+++ P T+ T+D G A L + PDGS +N
Sbjct: 492 SKVKVSGPGVRRSVPASLPAQFTVDTRD-------AGVADLECMVQRPDGSFIKPYFQNN 650
Query: 385 KNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSP--TTEGVKRRV 438
++GTY+ +YT + G + + ++ Q + SPF ++ D S T+G +R +
Sbjct: 651 EDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFNVEATPLGDASQCRITDGAERVI 818
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 383 DNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVS 428
DN++GT Y K G + +S+ D+ I+ SPF +K+ D S
Sbjct: 63 DNRDGTCRVEYYPTKPGKYDISVLFGDKPIKDSPFSVKIQNPVDAS 200
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 48/126 (38%)
Frame = +3
Query: 282 NELADQDFPLHPRENDQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTIIG 341
NE D P + D IV+ +G T AS+ T R I
Sbjct: 648 NEDGTYDVIYTPEDLGVYDIIVKYDGQDVPRSPFNVEATPLGDASQCRITDGAERVIPIE 827
Query: 342 QPMSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDF 401
+ +T+ D G +T + +P GS D +I+D +GT+ + Q G++
Sbjct: 828 KETVITVDAAD-------AGKGSVTCRIRSPSGSDIDIDIVDQGDGTFTISFIPQYAGEY 986
Query: 402 TLSLRL 407
+ ++
Sbjct: 987 IIEIKF 1004
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 364 YLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKV 421
+++A + P G + +I DN++GT Y + G L ++ ++ I+GSPF V
Sbjct: 1197 FVSASVIMPSGKTSYPKIEDNRDGTVTVRYQPTETGLHELHVKYNNECIQGSPFFFHV 1370
>19277
Length = 511
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%)
Frame = +2
Query: 325 ASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDN 384
AS+ +G+GL + + + + T++ Y LS S AD E DN
Sbjct: 101 ASKVKVSGDGLTEGMANEVNEFVVDTREA---------GYGGMSLSIEGPSKADIECHDN 253
Query: 385 KNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKV 421
++GT Y + G + ++++ DQH+ GSP+ +K+
Sbjct: 254 EDGTCRVTYKPTEPGTYIINIKFADQHVPGSPYSVKI 364
>14625
Length = 846
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 70/184 (38%)
Frame = +3
Query: 43 CERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSS 102
C C N PA S + C + + + +T+L + L GS+G
Sbjct: 75 CTGCESN--PATSFCVQCDDWLCADCVNAHKRVRMTKDHQLTSLEEALTNQGGSSGP--- 239
Query: 103 ILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHK 162
T V+ + C H + +C+ CE CR+C +H EH L++ E +K
Sbjct: 240 -----TEVS----MLCRVHPKEKLTLFCEKCEVLTCRDCQLLQHQEHKYQFLQEAAESYK 392
Query: 163 ASLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVL 222
A L L + R + I E + ++ +K + DI D + K + +
Sbjct: 393 AKLTGSLSLMKDRREVLWRYQTEIEERLSKVKREKNDLQQDILRQADVIVKAVRTAVWAV 572
Query: 223 LMEL 226
L L
Sbjct: 573 LSSL 584
>20514
Length = 803
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Frame = -2
Query: 463 RKENPIEDDLIFRVGTKG-----RNKGEFTNLQGVAASTSGKILIAD-SNNQCVQIFSN- 515
+++ PI + I +G G G F G+ +G I + D + +Q +I +
Sbjct: 451 KQDQPITQNTILILGPDGVFVRKFGAGRFFMPHGIEVDHAGNIWLTDVALHQVFRIPAGS 272
Query: 516 ---DGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIAD-YDNKWVSIFSNDGKFKTKIG 571
D RF + G +P+ VAV PSG+ ++D Y N + FS DG+F + G
Sbjct: 271 QEADLTLGERF-VHGDDHTHFCQPSDVAVLPSGEFFVSDGYCNSRIMKFSKDGQFLKQWG 95
Query: 572 SGKLMG 577
S ++G
Sbjct: 94 SPNIIG 77
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 645 SVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVAD 687
++ + +G F+ KFG+ G+F P G+ VD GNI + D
Sbjct: 424 TILILGPDGVFVRKFGA-----GRFFMPHGIEVDHAGNIWLTD 311
>33436
Length = 583
Score = 42.0 bits (97), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 21 LICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQT 66
L CSICLE +P C H FC C+ ++ ++ CP+C+ T
Sbjct: 406 LECSICLELMTSPVATKCEHYFCRFCITEFLEKKR-SVPCPLCKAT 272
>20704
Length = 874
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = -1
Query: 10 SPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSIL 69
S R DK C +C E Y K+LPC HT C +C+ ++ CP+CR +
Sbjct: 373 SMAARISDKSEFECPVCHEDYDQHKILPCKHTACHKCILTWLQKGGRNRGCPLCRVPILS 194
Query: 70 P 70
P
Sbjct: 193 P 191
>16231
Length = 1393
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Frame = +3
Query: 315 LGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKT---GNAYLTAELST 371
G + + A ATG G+ QP V + KD+ T G+ + ++
Sbjct: 654 FGVQVAPASNAKACYATGRGV------QPRGVRV--KDRADFYVHTKGAGDGEVAVQIIG 809
Query: 372 PDGSVADGEI--LDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSP 429
P G ++ + ++ +E +Y K G++ +++ DQHI SPFK+ +V P
Sbjct: 810 PGGVEEKCQLKKVPDQPEVWECVYNPSKPGNYIINITFGDQHISKSPFKI------EVGP 971
Query: 430 TTEGVKRRVKSPG--SGHVKQKAV--KRPAS 456
E K R PG G V+QKAV RP +
Sbjct: 972 YKES-KIRAYGPGLEGGVVQQKAVLLWRPTA 1061
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 380 EILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKRRVK 439
E LDN +G+ + Y G++ + + D+ I SPF AD+ P + +V
Sbjct: 1112 ECLDNGDGSADVWYLPTMPGEYAVHILCSDEDIPKSPFM------ADIKPAADFDAEKVI 1273
Query: 440 SPGSGHVK 447
+ G G K
Sbjct: 1274 AKGPGLEK 1297
>20092
Length = 467
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 516 DGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGSG-K 574
DG F+ R + G PTGV V+ GD+I+AD N V I N+G+ K G+ K
Sbjct: 250 DGLFEIRAKCVEKIRGDFDHPTGVCVNSKGDVIVADTANHVVKI-CNNGRVIKKFGADLK 426
Query: 575 LMGPKGVSVD 584
+ P V V+
Sbjct: 427 MWRPSAVVVN 456
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 652 EGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
+G F ++ + G F+ PTGV V+S G++IVAD N +++
Sbjct: 250 DGLFEIRAKCVEKIRGDFDHPTGVCVNSKGDVIVADTANHVVKI 381
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 471 DLIFRVGTKGRNK--GEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGR 528
D +F + K K G+F + GV ++ G +++AD+ N V+I N+G+ +FG
Sbjct: 250 DGLFEIRAKCVEKIRGDFDHPTGVCVNSKGDVIVADTANHVVKI-CNNGRVIKKFG---- 414
Query: 529 SPGQLQRPTGVAVH 542
+ ++ RP+ V V+
Sbjct: 415 ADLKMWRPSAVVVN 456
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 716 PQGLALTSDGHVVVADSGNHCFKV 739
P G+ + S G V+VAD+ NH K+
Sbjct: 310 PTGVCVNSKGDVIVADTANHVVKI 381
>27230
Length = 583
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Frame = -1
Query: 361 GNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLK 420
G + A L+TP G + + K+GTY LYT +EG +L + I GSPF++
Sbjct: 247 GQGEVEAILTTPSGRKLQTLVDNMKDGTYPVLYTPMEEGPQSLDVTYKGIPIPGSPFQVN 68
Query: 421 VIRSADVSPTTEGVKRRVKSPGSG 444
+ D + RV++ G G
Sbjct: 67 AVAGYDAN--------RVRAYGPG 20
>18540
Length = 988
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Frame = +3
Query: 621 QFAGPHFAAVNSNNEIIITD-FHNHSVKVFNQEGEFMLKFGSNGEGNGQ-------FNAP 672
F P AV ++ + ++D + N V F++EG + ++G + + F P
Sbjct: 78 HFCKPTDVAVLASGDFFVSDGYCNSRVMKFSKEGNLLKQWGRPDQFRARIQPQPNVFTIP 257
Query: 673 TGVAVDSNGNII-VADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLAL 721
+A+ + N++ VAD N RIQ FD G+F I +GP+ A+
Sbjct: 258 HSLALAEDLNLVCVADRENGRIQCFDLDGTFKFIIQHQQ---FGPRLFAI 398
>14716
Length = 481
Score = 38.1 bits (87), Expect = 0.012, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 21 LICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQN 79
L CS+CL + + C H FC C+ + + CP+CR+ P + ALQN
Sbjct: 146 LKCSLCLGPRRRTTLTVCGHLFCWDCIHQWCQEKA---ECPLCREQ--FPPHRLVALQN 307
>10203
Length = 2103
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 23 CSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQT 66
C+IC E + + LPC H F CL++++ + SCP CR +
Sbjct: 1109 CAICWEGMEAARKLPCGHLFHNSCLRSWLEQDT---SCPTCRMS 987
>29755
Length = 460
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 386 NGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVI 422
+G Y YTV+++G + L +R D++I GSPF + VI
Sbjct: 30 SGQYNINYTVKQQGSYMLIVRWGDENIPGSPFAVDVI 140
>27368
Length = 394
Score = 36.2 bits (82), Expect = 0.053, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 21 LICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQ 65
L+C +C + +P C HTFC CL++++ +L CP +Q
Sbjct: 4 LLCQLCHQPLVDPLETKCGHTFCTSCLKSHLAVQAL---CPEDKQ 129
>29288
Length = 421
Score = 34.7 bits (78), Expect = 0.14, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 31 KNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGV 74
K+P +L C H+FC+ CL+ T+ CP C++ + L K V
Sbjct: 406 KHPMLLRCGHSFCKPCLRKCETTED-TIQCPTCQKPTRLSLKTV 278
>33593
Length = 559
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = -3
Query: 1 MASEGASIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSC 60
+A SI + ++ + C +C + +P + C+H FC C+ + + A + +C
Sbjct: 446 LAPRSPSIQTXCQQRSRADLMECVVCGDWPIHPHHIGCIHXFCYFCIASNLKADP-SYTC 270
Query: 61 PVCRQTSILPEKGVAALQ 78
P C Q + + GV + Q
Sbjct: 269 PACGQGKM--KDGVVSPQ 222
>18689
Length = 723
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 26 CLERYKNPKVLPCLHTFCERCL 47
CL +Y+N LPCLHT CE C+
Sbjct: 104 CLTKYRN--FLPCLHTMCEDCI 163
>15938
Length = 752
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 23 CSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTS 67
C IC + + NP V C H +CE+C + + T C VC Q +
Sbjct: 232 CFICRKSFVNPVVTKCKHYYCEKCA---LAQYKKTQRCFVCGQQT 357
>03240
Length = 1683
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 576 MGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGD 619
+ P + +DRNGHI + D C F + N K R G+ D
Sbjct: 913 IKPDNILIDRNGHIKLTDFGLCTGFRWTHNSKYYQRDGTHARQD 782
>17930
Length = 798
Score = 32.7 bits (73), Expect = 0.57, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 23 CSICLERYKNPKVLPCLHTFCERC 46
C IC + + NP V C H +CE+C
Sbjct: 98 CFICRKSFVNPVVTKCKHYYCEKC 27
>14417
Length = 1383
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 11 PVVRQIDKQFL---ICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTS 67
PV+ Q+ L + S+ ++ NPK LPC H FC CL A CP C++
Sbjct: 458 PVLPQVKLMSLTDAVPSVWKKKSHNPK-LPCGHRFCASCLDR---AMINNPRCPKCQRLY 625
Query: 68 ILP 70
+P
Sbjct: 626 GIP 634
>21436
Length = 546
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 384 NKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVS 428
N++GT+ Y + G +T+ + D + SP K+KV + DVS
Sbjct: 258 NQDGTFTVEYEPKLPGTYTVMVYFADVEVPSSPVKVKVEPNIDVS 124
>31249
Length = 543
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -3
Query: 14 RQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCR 64
R++ +C++CL +V C H F C++ + S CP+C+
Sbjct: 367 RELKDHNDVCAVCLGSMGXARVTRCHHLFHAXCIRQLLEVSS---HCPLCK 224
>00178
Length = 944
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 353 KDGELCKTGNAYLTAELSTPDGSVADGE 380
+DGELC+ G + EL T DG+ ++G
Sbjct: 458 QDGELCQGGLVWRHGELRTADGTASNGH 375
>07523
Length = 1299
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 23 CSICLERYKNPKVLPCLH-TFCERCLQNYIPAHSLTLSCPVCR 64
C IC+ ++ +LPC H C C ++ S+ CP+CR
Sbjct: 456 CVICMSDMRDTLILPCRHLCLCSACAESLRYQASM---CPICR 337
>27069
Length = 653
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -2
Query: 104 LETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCRECTEGEHAE--HPTVPLK 155
++ + A A C ++D ++ EF C + T+ CR T H E +P VP +
Sbjct: 361 VDVINASTAASTTPCFDYDVSISEFAC*TSHTSPCRH-TAAVHGECDYPAVPAR 203
>26463
Length = 756
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 118 CPNHDGNVMEFYCQSCETAMCRECTEGEHAEH 149
C H+ ++ YC +C C C E EHA H
Sbjct: 197 CHLHENELLSVYCVTCMVTYCDTCVEKEHAGH 102
>23915
Length = 1006
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 536 PTGVAVHPSGDIIIADYDNKWVSIFSND----GKFKTKIGSGKLMGPKGVSVDRNGHIIV 591
P VAV +GDII++D +++ IFS+D +++ + +L GV D G + +
Sbjct: 208 PMDVAVAGNGDIIVSDA-GRFIQIFSSDFVLKKSYQSPLADSELW---GVCTDPGGSVYI 375
Query: 592 VDNK 595
D K
Sbjct: 376 ADWK 387
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|146219837|ref|NP_034253.3| eukaryotic translation
initiation factor 3, subunit 10 (theta) [Mus musculus]
(1344 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09075 344 2e-94
20901 322 5e-88
08309 30 0.13
01023 32 1.6
12696 30 4.9
>09075
Length = 960
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/296 (56%), Positives = 221/296 (74%)
Frame = +1
Query: 244 ELWQEAFKAVEDIHGLFSLSKKPPKPQLMANYYNKVSTVFWKSGNALFHASTLHRLYHLS 303
ELWQEAFKAVEDIHGL +LSKK PKP LMANYY K+ VF KSGN LFHA+TLHRL++LS
Sbjct: 1 ELWQEAFKAVEDIHGLITLSKKQPKPSLMANYYQKLGLVFAKSGNHLFHATTLHRLFNLS 180
Query: 304 REMRKNLTQEEMQRMSTRVLLATLSIPITPERTDIARLLDMDGIIVEKQRRLATLLGLQA 363
RE RKNL+ EE+Q+M+ RV+ ATL+IPI R + LL MD ++KQRRLATLL L +
Sbjct: 181 REQRKNLSPEELQKMANRVVCATLAIPIPASRNAVDSLLAMDETGIDKQRRLATLLMLPS 360
Query: 364 PPTRIGLINDMVRFSVLQYVVPEVKDLYNWLEVEFNPLKLCERVTKVLNWVREQPEKEPE 423
PPTR L+ D+V++ LQYV E+++LY +LEV+F+PL+L V ++ ++ +
Sbjct: 361 PPTRQNLVKDLVKYGSLQYVTQELQNLYKYLEVDFHPLRLYPAVQPIIQFI----GANED 528
Query: 424 LQQYVPQLQNNTILRLLQQVAQIYQSIEFSRLTSLVPFVDAFQLERAIVDAARHCDLQVR 483
L YVP ++ I R+L+QV+Q+YQ+IEF R SLVPF D F+LER IV AA++ +LQVR
Sbjct: 529 LAMYVPHMEEIIIARVLKQVSQVYQTIEFKRFASLVPFADKFKLERIIVGAAKNMELQVR 708
Query: 484 IDHTSRTLSFGSDLNYATREDAPVGPHLQSMPSEQIRNQLTAMSSVLAKALEVIRP 539
+DH + +LSFG+DL + +++ GP +QSMPSEQIRNQLTA+ VL++A+ VI P
Sbjct: 709 VDHRTLSLSFGTDLGLSQKDETAEGPTIQSMPSEQIRNQLTALGRVLSQAVRVIAP 876
>20901
Length = 1121
Score = 322 bits (826), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 159/201 (79%), Positives = 170/201 (84%)
Frame = -3
Query: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVD 60
MP YFQRPENALKRANEF++VGK Q ALD LYDV+KSKKHRTWQKIHEPIM KYLELCVD
Sbjct: 1029 MPTYFQRPENALKRANEFIDVGKAQRALDALYDVIKSKKHRTWQKIHEPIMEKYLELCVD 850
Query: 61 LRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYXXXXXXXXXXXXXXSQQMVLDIEDLDN 120
LRKSH+AKEGLYQYKNICQQVNI SL DVVR Y S Q VLDI+DLD
Sbjct: 849 LRKSHIAKEGLYQYKNICQQVNINSLVDVVRKYIALAEERTEAARQESHQTVLDIDDLDL 670
Query: 121 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQ 180
+PES+LL AVSGEDTQDRTDR +LTPWVKFLWESYRQCLDLLRNNSRVERLY DIAQQ
Sbjct: 669 PDSPESLLLKAVSGEDTQDRTDRAILTPWVKFLWESYRQCLDLLRNNSRVERLYQDIAQQ 490
Query: 181 AFKFCLQYTRKAEFRKLCDNL 201
AFKFCL+Y+RK EFRKLCDN+
Sbjct: 489 AFKFCLKYSRKTEFRKLCDNV 427
Score = 37.0 bits (84), Expect = 0.048, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -1
Query: 201 LRMHLSQIQRHHNQSTAINLNNPES 225
LR HL + +H +Q TAINLNNP+S
Sbjct: 77 LRTHLGHVYKHQHQQTAINLNNPDS 3
>08309
Length = 469
Score = 30.4 bits (67), Expect(2) = 0.13, Method: Composition-based stats.
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -1
Query: 234 LVQLDSAISMELWQ 247
LVQLDSAI+MELWQ
Sbjct: 436 LVQLDSAINMELWQ 395
Score = 23.9 bits (50), Expect(2) = 0.13, Method: Compositional matrix adjust.
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2
Query: 223 PESQSMHLETRLV 235
P+SQ+MHLET L
Sbjct: 468 PDSQAMHLETALC 430
>01023
Length = 2030
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 233 RLVQLDSAISMELWQEAFKAVEDIHGLFSLSKKPPKPQLMANYY-NKVSTVFWKSGNALF 291
RLVQ+D +S+ A + +GL + P PQL +Y N + W LF
Sbjct: 274 RLVQIDHVVSLVRLCSAKRDSRKKNGLDDF*RLAPAPQLCEHYTKNVICCSRW----VLF 441
Query: 292 HASTLHRLYHLSREM 306
AS L + +SRE+
Sbjct: 442 FASRLKKCATISREL 486
>12696
Length = 3296
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3
Query: 294 STLHRLYHLSREMRKNL 310
+TLHRL++LSRE RKNL
Sbjct: 3294 TTLHRLFNLSREQRKNL 3244
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|148747410|ref|NP_666097.3| archain 1 [Mus musculus]
(511 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14416 257 2e-94
04701 26 2.6
>14416
Length = 1343
Score = 257 bits (656), Expect(2) = 2e-94, Method: Compositional matrix adjust.
Identities = 113/182 (62%), Positives = 148/182 (81%), Gaps = 1/182 (0%)
Frame = -3
Query: 331 PNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCD 390
PNVDKKLF A S + LKNP+K FP+N DVGVLKWRLQT +E+ IPL+INCWPSES +GC+
Sbjct: 1047 PNVDKKLFLATSQVALKNPDKPFPLNQDVGVLKWRLQTQDEALIPLSINCWPSESSSGCE 868
Query: 391 VNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNK 450
VNIEYEL++ +++L DVVI+IP PSG+G+PV+G+ DG+Y +D+ + L+W LP IDA NK
Sbjct: 867 VNIEYELEQADMQLEDVVISIPCPSGMGSPVVGDCDGDYHYDTHKKHLQWSLPFIDATNK 688
Query: 451 SGSLEFSI-PGQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYE 509
SGSLEF++ G P+DFFPV VSF SKK YC+IQVT+V Q+ + P +FS++ F VD+YE
Sbjct: 687 SGSLEFTMHGGHPDDFFPVNVSFTSKKPYCDIQVTEVKQLADDQPEKFSSDVVFFVDRYE 508
Query: 510 IL 511
I+
Sbjct: 507 IV 502
Score = 107 bits (267), Expect(2) = 2e-94, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Frame = -1
Query: 231 KGKEVDNFVDKLKSEGETIMSSNMGKRTSEA-TKVHAPPINMESVHMKIEEKITLTCGRD 289
K K+VD FV +++ EGE ++ + G++ S A +K P +N ESVH+ IEEK+ LT GRD
Sbjct: 1343 KKKDVDTFVGQIQLEGEKVV--DAGRQGSSAISKSSTPAVNQESVHISIEEKMVLTAGRD 1170
Query: 290 GGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHP 331
GGLQN+E+HG++ L++++D GRI++ N+D KG+Q+QTHP
Sbjct: 1169 GGLQNLEVHGIMKLKVAEDXVGRIKVCTINKDNKGIQIQTHP 1044
>04701
Length = 4543
Score = 25.8 bits (55), Expect(2) = 2.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +3
Query: 5 AAAVCTKAGKAIVSRQFVEMTRTRIE-GLLAAFPKLMNTGKQHT----FVETESVRYVYQ 59
A + GK ++SR + R I+ ++ F L+ G+ + + +V +VY
Sbjct: 99 AIYILDVKGKVLISRNY----RGDIDMSVIDKFMPLVMEGEDDSNVTPIISHGNVTFVYI 266
Query: 60 PMEKLYMVLITTKNSNI 76
LY+V T KN+N+
Sbjct: 267 KYNNLYLVSTTRKNANV 317
Score = 22.3 bits (46), Expect(2) = 2.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 92 EYCRALEENEISEHCFDLIFAFDEIVALGY 121
EY + LEE I ++ + DE++ GY
Sbjct: 362 EYFKELEEESIRDNFVIIYELLDEVMDFGY 451
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|19526826|ref|NP_598433.1| vacuolar protein sorting 26
isoform a [Mus musculus]
(327 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01953 341 2e-94
01034 249 1e-66
13123 63 2e-10
05131 44 1e-04
08430 28 4.4
29983 28 4.5
10713 27 8.0
>01953
Length = 1732
Score = 341 bits (874), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/227 (73%), Positives = 194/227 (85%), Gaps = 6/227 (2%)
Frame = -2
Query: 100 ELTQSRSYDFEFMQVEKPYESYIGANVRLRYFLKVTIVRRLTDLVKEYDLIVHQLATYPD 159
+LT ++SY FEF QVEKPYESY GANVRLRYFL+VTIV+R++D+VKE D++VH L+ YPD
Sbjct: 1731 DLTHNQSYPFEFQQVEKPYESYTGANVRLRYFLRVTIVKRISDVVKEQDIVVHTLSQYPD 1552
Query: 160 VNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGI 219
+NNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKI+HMELQ+IK+E TG
Sbjct: 1551 MNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMELQVIKRETTGT 1372
Query: 220 GPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVLV 279
GP+T E ETIAKYEIMDGAPV+GESIPIRLFL+GY+ TP+MRD+NKKFSV+Y+LNLVLV
Sbjct: 1371 GPNTFNENETIAKYEIMDGAPVRGESIPIRLFLSGYELTPSMRDINKKFSVKYYLNLVLV 1192
Query: 280 DEEDRRYFKQQEIILWRKAPEKLRKQRTNF------HQRFESPDSQA 320
DEE+RRYFKQQEII++RKA QR N+ HQ P A
Sbjct: 1191 DEEERRYFKQQEIIIFRKA----DXQRKNYQMALQHHQPVNPPQGFA 1063
>01034
Length = 522
Score = 249 bits (636), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 114/155 (73%), Positives = 139/155 (89%)
Frame = -1
Query: 69 RIEFVGQIELFNDKSNTHEFVNLVKELALPGELTQSRSYDFEFMQVEKPYESYIGANVRL 128
++EF+GQIEL+ D+ N HEF +LVKELA PG+LT ++SY FEF QVEKPYESY GANVRL
Sbjct: 465 KVEFIGQIELYYDRGNHHEFTSLVKELARPGDLTHNQSYPFEFQQVEKPYESYTGANVRL 286
Query: 129 RYFLKVTIVRRLTDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLK 188
RYFL+VTIV+R++D+VKE D++VH L+ YPD+NNSIKMEVGIEDCLHIEFEYNKSKYHLK
Sbjct: 285 RYFLRVTIVKRISDVVKEQDIVVHTLSQYPDMNNSIKMEVGIEDCLHIEFEYNKSKYHLK 106
Query: 189 DVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPST 223
D IVGKIYFLLVRIKI++MEL ++++E TG GP+T
Sbjct: 105 DAIVGKIYFLLVRIKIRYMELAIVRRETTGAGPNT 1
>13123
Length = 523
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Frame = +3
Query: 176 IEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPST 223
+ + + ++YHLKD IVGKIYFLLVRIKI++MEL ++++E TG G +
Sbjct: 186 LTWSWWTARYHLKDAIVGKIYFLLVRIKIRYMELAIVRRETTGAGTAA 329
>05131
Length = 864
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Frame = +1
Query: 118 YESYIGANVRLRYFLKVTIVRRL--TDLVKEYDLIVH-----QLATYPDVNNSIKME--V 168
YE+Y G V ++Y ++V + R L DL K+ + I+ + A VN SI E
Sbjct: 70 YETYHGVFVNIQYMIRVEMKRSLLNKDLQKQCEFIIEYKSQEEKAKPKPVNFSISPETLA 249
Query: 169 GIEDCLHI-----EFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPST 223
G+++ +I + + S + D + G++ + ++ +E+Q+++ E G
Sbjct: 250 GVKEKQNIPKFKVKGKLESSCVKITDPLKGELVLEHCEVPVKSIEIQMVRVETCGCAEGY 429
Query: 224 TTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFSVRY 272
+ I +I DG + +IPI + PT+ N K Y
Sbjct: 430 AKDATEIQNIQIADGDVCRNLAIPIYMIFPRLFTCPTLSTNNFKIGDTY 576
>08430
Length = 1632
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 142 DLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYN 181
DL+ E ++ A + D N SI + V IE CL+ +F Y+
Sbjct: 361 DLMLEPVVMAKFQAPHDDANLSIMVLVDIESCLYCQFRYS 480
>29983
Length = 1021
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -1
Query: 257 PTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAPEKLRKQRTN 308
P P ++D N ++RY+L + L +E+ + Q W+K + Q+TN
Sbjct: 763 PHPKIKDSNNNENMRYWLQMNLENEDSLINQELQNDTYWQKLKRQXYSQQTN 608
>10713
Length = 1615
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 280 DEEDRRYFKQQEIILWRKAPEKLR 303
+++D RYF Q +W K P+ LR
Sbjct: 538 NQQDXRYFSFQAPTIWNKLPDSLR 467
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|21313510|ref|NP_079793.1| RNA terminal phosphate
cyclase domain 1 [Mus musculus]
(366 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09492 341 3e-94
00302 30 1.8
29742 28 5.1
>09492
Length = 1754
Score = 341 bits (874), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 159/284 (55%), Positives = 215/284 (75%)
Frame = +2
Query: 83 KIRGGVHTADTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGTNAEMAPQIDYTMMVFKP 142
+I+ G + ADTKTAGS+CLLMQ ++PC+LF +P+++ ++GGTNA+MAPQ+DYTMMVF+P
Sbjct: 2 QIKAGSYRADTKTAGSICLLMQAALPCLLFGGAPTQVSIRGGTNADMAPQVDYTMMVFQP 181
Query: 143 IAEKFGFTFNCDIKTRGYYPKGGGEVIVRVSPVKRLDPINLTDRGSVTKIYGRAFVAGVL 202
+AEKFG F C+IK RGYYPKGGGEV+ P+K L +T+RG VT+IYGR+FVAGVL
Sbjct: 182 MAEKFGMKFECEIKKRGYYPKGGGEVMTTSYPLKVLSATEITNRGEVTRIYGRSFVAGVL 361
Query: 203 PLKVAKDMAAAAVRCIRKEIRDLYVSIQPVQEARDQAFGNGSGIIIVAETSTGCLFAGSS 262
P+K+A M +A R +R++ + + I+ ++E A GNG+GII+VAET+TGCL AGS+
Sbjct: 362 PMKIAHTMVQSAERLLRQDGACIPIQIEALKEPEHAALGNGTGIILVAETTTGCLLAGSA 541
Query: 263 LGKRGVNADKAGIEAAEMLLANLRHGGTVDEYLQDQLIIFMALANGISRIKTGSVTLHTQ 322
LGK+GV A+K G +AA ML++NL HGG VDEYLQDQLI+ MALA G SR+ G V+LHT+
Sbjct: 542 LGKKGVPAEKVGADAAHMLISNLHHGGCVDEYLQDQLILLMALARGKSRVLCGPVSLHTE 721
Query: 323 TAIHFAEQLAKAKFTVKKSEEEEDATKDTYVIECEGIGMANPHL 366
TAIH A+ L +A+F ++K E T +IEC+GIG N +
Sbjct: 722 TAIHVAKLLTQAQFKIEKVSE------TTNMIECDGIGHENSQM 835
>00302
Length = 927
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = -2
Query: 21 RVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMVRDLCGGHLEGAEIGSTEITFT 80
+ ST L LL + L Q A PGL P H+ + D +EGA++
Sbjct: 812 KCSTNLH-LLNIKLPKQMAMAANLVPGLAPNHVHDPDPGPDTGTAKVEGADLAH---ALV 645
Query: 81 PEKIRGGVHTAD 92
P I+G V AD
Sbjct: 644 PALIQGAVTVAD 609
>29742
Length = 351
Score = 28.1 bits (61), Expect = 5.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 185 DRGSVTKIYGRAFVAGVLPLKVAKDMAAAAVRC 217
DRG+V ++ G AFVA V L V AV C
Sbjct: 260 DRGAVLEMQGVAFVAHVTDLTVQSRRVVCAVTC 162
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6671539|ref|NP_031464.1| fructose-bisphosphate
aldolase A [Mus musculus]
(364 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12684 211 4e-94
32571 162 3e-54
04687 114 6e-26
01154 89 3e-18
19270 49 3e-06
09977 28 8.5
25431 27 8.9
>12684
Length = 1376
Score = 211 bits (536), Expect(2) = 4e-94, Method: Compositional matrix adjust.
Identities = 97/124 (78%), Positives = 112/124 (90%)
Frame = +1
Query: 119 TNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASIC 178
++ E+TTQGLDGLSERCAQYKKDGA FAKWRCVLKI ++TPS A+MENANVLARYASIC
Sbjct: 1 SHDESTTQGLDGLSERCAQYKKDGAQFAKWRCVLKISKNTPSHQAMMENANVLARYASIC 180
Query: 179 QQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGH 238
QQNG+VPIVEPE+LPDG+HDL+ Q VTE+VLA YKALS+HHVYLEG+LLKPNMVT G
Sbjct: 181 QQNGLVPIVEPEVLPDGEHDLETAQKVTEQVLAYTYKALSEHHVYLEGSLLKPNMVTAGQ 360
Query: 239 ACTQ 242
AC++
Sbjct: 361 ACSK 372
Score = 152 bits (383), Expect(2) = 4e-94, Method: Compositional matrix adjust.
Identities = 80/122 (65%), Positives = 90/122 (73%)
Frame = +2
Query: 243 KFSNEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSY 302
K S+E+IA+ATVTAL R VP AV G+ FLSGGQSEE+A+INL+AINK PWALTFSY
Sbjct: 371 KVSHEQIAIATVTALSRXVPGAVPGICFLSGGQSEEDATINLDAINKYKGKNPWALTFSY 550
Query: 303 GRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNH 362
GRALQAS LKAW G K N AAQ E +KRA AN AC GKY G G A ESLF++ H
Sbjct: 551 GRALQASVLKAWKGNKANTDAAQGELLKRAKANGEACVGKYA-GGVKGTAGGESLFVAGH 727
Query: 363 AY 364
AY
Sbjct: 728 AY 733
>32571
Length = 515
Score = 162 bits (411), Expect(2) = 3e-54, Method: Compositional matrix adjust.
Identities = 75/93 (80%), Positives = 84/93 (90%)
Frame = -1
Query: 115 PLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARY 174
PLAG++ E TTQGLDGLSERCAQYKKDGA FAKWRCVLKI ++TPS A+MENANVLARY
Sbjct: 446 PLAGSHNECTTQGLDGLSERCAQYKKDGAQFAKWRCVLKISKNTPSYQAMMENANVLARY 267
Query: 175 ASICQQNGIVPIVEPEILPDGDHDLKRCQYVTE 207
ASICQQNG+VPIVEPE+LPDG+HDL+ Q VTE
Sbjct: 266 ASICQQNGLVPIVEPEVLPDGEHDLQTAQKVTE 168
Score = 67.4 bits (163), Expect(2) = 3e-54, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = -2
Query: 208 KVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACTQKFSNEEIAM 251
+VLA YKAL+DHHV+LEGTLLKPNMVT G +C K+S+E+IA+
Sbjct: 166 QVLAFQYKALADHHVFLEGTLLKPNMVTAGQSCATKYSHEQIAV 35
>04687
Length = 1330
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 72/97 (74%)
Frame = +2
Query: 268 VTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEE 327
+TFLSGGQSEE+A+INL+AINK PWA+TFSYGRALQAS L AW GKKEN+ AAQ E
Sbjct: 2 ITFLSGGQSEEDATINLDAINKYKGKNPWAVTFSYGRALQASVLAAWKGKKENVAAAQAE 181
Query: 328 YIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364
+ R ANS AC GKY GAA +SLF++ HAY
Sbjct: 182 LLARGKANSEACVGKYAGG-VQGAAGGQSLFVAGHAY 289
>01154
Length = 2463
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 49/70 (70%)
Frame = -2
Query: 295 PWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAAS 354
PWALTFSYGRALQAS LKAW G K N AAQ E +KRA AN AC GKY G G A
Sbjct: 2462 PWALTFSYGRALQASVLKAWKGNKANTDAAQGELLKRAKANGEACVGKY-AGGVKGTAGG 2286
Query: 355 ESLFISNHAY 364
ESLF++ HAY
Sbjct: 2285 ESLFVAGHAY 2256
>19270
Length = 442
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -1
Query: 165 MENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVT 206
++N++V + QNG+VPIVEPE+LPDG+HDL+ Q VT
Sbjct: 115 LDNSHVCMTFV----QNGLVPIVEPEVLPDGEHDLQTAQKVT 2
>09977
Length = 1760
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 289 KCPLLKPWALTFSYGRALQASALKAWGGKKE 319
KCP++ P+ + G L+ + K WG K+
Sbjct: 935 KCPIVNPFHTLLNNGETLEETEWKKWGRTKD 843
>25431
Length = 1623
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 120 NGETTTQGLDGL-SERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENAN 169
NG T D L S + A+ +GAD C LKI P+ L +++N N
Sbjct: 161 NGVQTMVEFDNLESAKRAKQSLNGADVYSGCCTLKIEYAKPTRLNVVKNDN 313
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|164663791|ref|NP_035231.2| protein kinase C, alpha
[Mus musculus]
(672 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
18484 289 4e-93
30755 216 3e-56
18663 179 5e-45
25445 175 4e-44
03240 164 7e-41
00486 148 8e-36
26156 109 1e-31
27405 117 2e-26
25019 80 2e-25
12721 110 1e-24
31885 107 2e-23
26560 102 4e-22
09606 101 9e-22
17722 100 4e-21
13066 99 5e-21
14420 99 5e-21
18921 99 7e-21
06405 96 5e-20
15910 94 2e-19
00300 94 2e-19
13592 86 4e-17
01707 85 1e-16
01392 82 6e-16
21808 80 2e-15
01060 80 3e-15
21079 79 6e-15
13212 78 1e-14
29581 76 4e-14
14126 72 7e-13
01756 70 2e-12
27546 70 3e-12
16549 70 4e-12
28638 53 4e-12
21433 69 6e-12
19094 69 7e-12
32957 68 1e-11
00392 68 1e-11
14116 67 2e-11
04852 66 4e-11
37602 65 7e-11
29179 65 9e-11
04591 63 3e-10
17591 52 3e-10
09007 63 4e-10
11185 62 6e-10
38560 62 8e-10
07940 60 4e-09
26711 59 7e-09
12672 58 1e-08
30339 58 2e-08
31935 57 3e-08
35187 57 4e-08
17300 56 5e-08
01966 56 6e-08
03508 55 9e-08
19761 55 9e-08
33586 47 1e-07
12786 55 1e-07
29590 54 2e-07
04138 54 2e-07
26525 54 3e-07
11353 54 3e-07
00715 53 4e-07
17975 53 4e-07
01718 53 5e-07
07291 52 6e-07
19301 52 9e-07
19361 52 1e-06
11780 47 2e-06
30040 51 2e-06
20640 51 2e-06
16708 49 5e-06
22804 49 5e-06
30743 45 1e-04
20152 45 1e-04
27274 43 5e-04
18996 42 7e-04
02638 42 0.001
07836 41 0.001
14477 40 0.002
08294 40 0.003
03942 40 0.003
12442 40 0.004
36305 38 0.012
11404 38 0.012
22005 38 0.013
31120 37 0.030
26304 37 0.033
13896 35 0.083
17253 35 0.093
13155 35 0.10
29360 34 0.16
18401 34 0.22
23319 33 0.28
02913 33 0.36
17516 33 0.45
17932 33 0.50
01494 32 0.96
02841 31 1.3
26009 31 1.5
26052 31 1.8
13305 31 2.0
16300 30 2.2
18481 30 3.2
17357 30 3.2
33692 30 3.8
36388 29 5.4
17637 29 5.8
18567 29 6.8
00638 28 8.3
32359 28 9.2
>18484
Length = 635
Score = 289 bits (739), Expect(2) = 4e-93, Method: Compositional matrix adjust.
Identities = 133/161 (82%), Positives = 145/161 (90%)
Frame = +1
Query: 424 DLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFG 483
DLMY IQQ GKFKEP A FYAAEI++GLFFLH +GIIYRDLKLDNVMLDSEGHIKIADFG
Sbjct: 1 DLMYRIQQEGKFKEPVAAFYAAEIAVGLFFLHDQGIIYRDLKLDNVMLDSEGHIKIADFG 180
Query: 484 MCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE 543
MCKE M TTRTFCGTPDYIAPEI+ YQPY KSVDWWAYGVLL+EMLAGQPPFDGEDE
Sbjct: 181 MCKEGMTGDATTRTFCGTPDYIAPEIVLYQPYSKSVDWWAYGVLLFEMLAGQPPFDGEDE 360
Query: 544 DELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCG 584
DELF SI +HNVSYPK++S+EAVS+CKGL+ K+P KRLGCG
Sbjct: 361 DELFSSITDHNVSYPKAMSREAVSLCKGLLMKNPTKRLGCG 483
Score = 72.0 bits (175), Expect(2) = 4e-93, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Frame = +2
Query: 581 LGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCG-KGAENFDKFFTRG 633
LG GERD+R+HAFFRRI W+K+++ E+QPP+KPK+ + AENFDK FTR
Sbjct: 473 LGVVQNGERDIRDHAFFRRIVWDKIKSMEVQPPYKPKITDRRKAENFDKSFTRA 634
>30755
Length = 1137
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 142/215 (66%), Gaps = 1/215 (0%)
Frame = +2
Query: 428 HIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 487
H+ F E + FY AEI L +LH +GIIYRDLKL+N++LD +GHIK+ADFG+CKE
Sbjct: 2 HLSHERIFTEERTRFYGAEIISALGYLHSQGIIYRDLKLENLLLDKDGHIKVADFGLCKE 181
Query: 488 HMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELF 547
+ G TT+TFCGTP+Y+APE++ YG++VDWW GV++YEM+ G+ PF D D LF
Sbjct: 182 DITYGRTTKTFCGTPEYLAPEVLDDNDYGRAVDWWGTGVVMYEMICGRLPFYNRDHDVLF 361
Query: 548 QSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLEN 607
I+ +V +P++++ EA S+ GL+ K P RLG G + ++++ H FF I+W L
Sbjct: 362 TLILVEDVKFPRNITDEAKSLLSGLLAKDPRNRLGGGQDDVKEIQAHPFFASINWTDLVQ 541
Query: 608 REIQPPFKPKVCG-KGAENFDKFFTRGQPVLTPPD 641
++I PPFKP+V FD+ FT LTPPD
Sbjct: 542 KKITPPFKPQVTSDTDTRYFDEEFTGESVELTPPD 646
>18663
Length = 600
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 118/177 (66%), Gaps = 12/177 (6%)
Frame = +2
Query: 497 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF---------DGEDEDELF 547
TFCGTP+YIAPEI+ + YG SVDWWA GVLLYEMLAG+ PF D ED LF
Sbjct: 5 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDIAGASENPDQNTEDYLF 184
Query: 548 QSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGE-RDVREHAFFRRIDWEKLE 606
Q I+E + P+SLS +A S+ KG + K+PA RLGC E D+ H FF+ IDWE LE
Sbjct: 185 QVILEKTIRIPRSLSVKAASVLKGFLNKNPADRLGCHRESAFMDIVNHPFFKVIDWEMLE 364
Query: 607 NREIQPPFKPKV-CGKGAENFDKFFTRGQPV-LTPPDQLVIANIDQSDFEGFSYVNP 661
+++ PPFKP++ + NF FT G+PV LTP D VI +IDQS+FEGF YVNP
Sbjct: 365 RKQVSPPFKPRLDSDRDLANFPIEFT-GEPVQLTPDDDHVIDSIDQSEFEGFEYVNP 532
>25445
Length = 460
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 109/154 (70%), Gaps = 4/154 (2%)
Frame = -1
Query: 80 EFVTFSCPGADKGPDTDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNV 139
EFV+F+CPGAD GPD+D + HKFK HTYGSPTFCDHCGSLLYGLIHQG+KCD+CDMN
Sbjct: 460 EFVSFACPGADNGPDSDA-TNLHKFKAHTYGSPTFCDHCGSLLYGLIHQGLKCDSCDMNC 284
Query: 140 HKQCVINVPSLCGMDHTEKRGRIYLKAEVTDEKLHVTVRDAKN----LIPMDPNGLSDPY 195
HK+C +VP LCGMDHTE+RGRIYL+ KL V V++AK I M L
Sbjct: 283 HKRCEKHVPRLCGMDHTERRGRIYLRISPHGSKLLVNVKEAKKPCVPWIQMVWPILIPK* 104
Query: 196 VKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTF 229
+IP + E TKTI+S+LNPQW+E+FT
Sbjct: 103 S*FHMIPTKQTE----TKTIKSSLNPQWDETFTL 14
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 41/92 (44%)
Frame = -1
Query: 20 FARKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCH 79
FA GA + HKF A + PTFC HC ++G QG +C C HKRC
Sbjct: 448 FACPGADNGPDSDATNLHKFKAHTYGSPTFCDHCGSLLYGLIHQGLKCDSCDMNCHKRCE 269
Query: 80 EFVTFSCPGADKGPDTDDPRSKHKFKIHTYGS 111
+ V C G D + R + +I +GS
Sbjct: 268 KHVPRLC-----GMDHTERRGRIYLRISPHGS 188
>03240
Length = 1683
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 181/387 (46%), Gaps = 59/387 (15%)
Frame = -3
Query: 300 ELRQKFEKAKLGPAGNKVISPSEDRKQPSN-NLDRVKLTD--FNFLMVLGKGSFGKVMLA 356
+L + K KL + + +K+ + L R K+ F + LG G+FG+V L
Sbjct: 1411 QLENEMAKVKLSEEAARQMRRMLHQKESNYIRLKRAKMDKCMFEKIKTLGVGAFGEVSLC 1232
Query: 357 DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFV 416
+ T LYA+K L+K V++ + V E+ +LA D ++ +L+ FQ + LYFV
Sbjct: 1231 RKNDTGMLYAMKTLRKSDVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQDHNYLYFV 1055
Query: 417 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGH 476
M+YV GGDLM + ++ EP A FY AE+ + +H+ G I+RD+K DN+++D GH
Sbjct: 1054 MDYVPGGDLMGLLIRMEILDEPLARFYVAELVQAIESVHRMGFIHRDIKPDNILIDRNGH 875
Query: 477 IKIADFGMC---------KEHMMDGVTTR------------------------------- 496
IK+ DFG+C K + DG R
Sbjct: 874 IKLTDFGLCTGFRWTHNSKYYQRDGTHARQDSMEVKCQLDEQCQCEILKPLERRRKREQR 695
Query: 497 ----TFCGTPDYIAPEIIA-YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 551
+ GTP+YIAPE+++ Y DWW+ GV+L+EML G PPF E ++
Sbjct: 694 CLAHSLVGTPNYIAPEVLSRLGGYTSVCDWWSVGVILFEMLVGHPPFYANTPAETQYKVI 515
Query: 552 EHNVSYPKSLSKEAVSICKGLMTKHPAK----RLGCGPE------GERDVREHAFFRRID 601
K+ + I + PAK RL CG + G +++ H FF ++
Sbjct: 514 NW---------KDMLKIPRESNLSQPAKDLILRLCCGSDDRLGLNGAGEIKTHMFFAGVN 362
Query: 602 WEKLENREIQPPFKPKV-CGKGAENFD 627
+E L R+ QPP+ P + NFD
Sbjct: 361 FETL--RKQQPPYVPNIRYATDTSNFD 287
>00486
Length = 797
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Frame = -2
Query: 495 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN 554
T TFCGT +Y+APEI+ +GK+VDWW+ G L+Y+ML G PPF E+ + I++
Sbjct: 787 THTFCGTIEYMAPEILTRTGHGKAVDWWSLGALMYDMLTGSPPFTAENRKKTIDKILKGK 608
Query: 555 VSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPF 614
++ P L+ EA + K L+ K+PA+RLG G + +++H FFR +W L R +PPF
Sbjct: 607 LNLPPYLTNEARGLIKKLLRKNPAERLGGGHDDSGPIKDHQFFRNTNWALLALRRAEPPF 428
Query: 615 KPKVCG-KGAENFDKFFTRGQPVLTPPDQLVIANIDQSDFEGFSYVNPQFVHPI 667
+P V + FD FTR PV +P D ++ +I+Q F+GF+Y+ P + +
Sbjct: 427 RPNVTSDEDTSQFDTKFTRQTPVDSPDDTILSDSINQV-FKGFTYIAPSVLEEV 269
>26156
Length = 479
Score = 109 bits (273), Expect(2) = 1e-31, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 76/111 (68%)
Frame = -1
Query: 332 DRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVL 391
+++ LTDF L V+G+GS+ KV+ + K T+ +YA+K++KK++V D+D++ EK V
Sbjct: 404 NKLGLTDFLLLRVIGRGSYAKVLQVEHKRTKRIYAMKVIKKELVNDDEDIDWVQTEKHVF 225
Query: 392 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF 442
PFL LHSCFQ+ RL+FV+E+VNGGDLM+H+Q+ + E A F
Sbjct: 224 ETATNYPFLVGLHSCFQSESRLFFVIEFVNGGDLMFHMQRQRRLPEEHARF 72
Score = 45.8 bits (107), Expect(2) = 1e-31, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = -3
Query: 442 FYAAEISIGLFFLHKRGIIYRDLKL 466
FY+AEI + L FLHKRGI+YRDLKL
Sbjct: 75 FYSAEICLALNFLHKRGIVYRDLKL 1
>27405
Length = 532
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 4/178 (2%)
Frame = -3
Query: 349 SFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL---DKPPFLTQLHS 405
FG+V + T ++YA+K L K + + E+ +L+L+ + PF+ +
Sbjct: 530 GFGEVYGCRKADTGKMYAMKCLDKKRIKMKGGETLALNERIMLSLVSTGEGSPFIVCMTY 351
Query: 406 CFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLK 465
FQT ++L F+++ +NGGDL YH+ Q G F E + FYAAE+ +GL +H R ++YRDLK
Sbjct: 350 AFQTPEKLCFILDLMNGGDLHYHLSQHGVFTEKEVRFYAAEVMLGLEHMHSRFVVYRDLK 171
Query: 466 LDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAY-QPYGKSVDWW 522
N++LD GH++I+D G+ + GT Y+APE++ Q Y S DW+
Sbjct: 170 PANILLDENGHVRISDLGLACD--FSKKKPHASVGTHGYMAPEVLMKGQAYDSSADWF 3
>25019
Length = 730
Score = 79.7 bits (195), Expect(2) = 2e-25, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +3
Query: 467 DNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYG 525
+NV+LD +GH+K+ DFG+CKE + T TFCGT +Y+APEI+ +GK+VDWW+ G
Sbjct: 261 ENVLLDKDGHVKLTDFGLCKEAITGTRVTHTFCGTIEYMAPEILTRTGHGKAVDWWSLG 437
Score = 55.1 bits (131), Expect(2) = 2e-25, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +1
Query: 524 YGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLG 582
+G L+Y+ML G PPF E+ + I++ ++ P L+ EA + K L+ K+PA+RLG
Sbjct: 433 WGALMYDMLTGSPPFTAENRKKTIDKILKGKLNLPPYLTNEARGLIKKLLRKNPAERLG 609
>12721
Length = 821
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)
Frame = +1
Query: 303 QKFEKAKLGPAGNKVISPSEDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTE 362
Q+ + A V++P + R L DF M +G+GS G V +A +
Sbjct: 22 QRLSHEQFRAALQMVVTPGDPR---------TFLDDF---MKIGEGSTGIVCIATSRDGR 165
Query: 363 ELYAIKILKKDVVIQDDDVECTMVEKRVLALLD-KPPFLTQLHSCFQTVDRLYFVMEYVN 421
++ A+K K D+ Q ++ V+ + D P + ++++ + D L+ VME++
Sbjct: 166 QM-AVK--KMDLRKQQ---RRELLFNEVVVMRDYHHPNIVEMYNSYLVNDELWVVMEFME 327
Query: 422 GGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIAD 481
GG L I + E Q L FLH G+I+RD+K D+++L +G +K+ D
Sbjct: 328 GGAL-TDIVTNNRMDEVQIATVCRACLKALAFLHANGVIHRDIKSDSILLSHDGKVKLXD 504
Query: 482 FGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 541
FG C + D ++ GTP ++APE+I+ PYG VD W+ G+++ EM+ +PPF E
Sbjct: 505 FGFCAQVTQDLQKRKSLVGTPYWMAPEVISRLPYGPEVDIWSLGIMVMEMIDAEPPFFNE 684
>31885
Length = 529
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 85/146 (58%), Gaps = 5/146 (3%)
Frame = -2
Query: 398 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR 457
PFL L FQ + L+ V++ GGDL YH+QQ F+E FY ++++ L +L +
Sbjct: 492 PFLVNLWYAFQDEEDLFMVVDLFLGGDLRYHMQQEVSFREDCVKFYLCQLALVLDYLRSQ 313
Query: 458 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAY----- 512
I++RD+K DN++LD +GH + DF + + D + T T GT Y+APE+
Sbjct: 312 KIVHRDIKPDNILLDEQGHCHVTDFNIATQLEDDELATST-SGTRPYMAPEVYGVAINER 136
Query: 513 QPYGKSVDWWAYGVLLYEMLAGQPPF 538
+ YG VDWW+ GV L+E+L + PF
Sbjct: 135 RGYGFPVDWWSLGVSLFELLKKRRPF 58
>26560
Length = 398
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = -1
Query: 424 DLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFG 483
DL YH+ Q G F E + FYAAE+ +GL +H R ++YRDLK N++LD GH++I+D G
Sbjct: 398 DLHYHLSQHGVFTEKEVRFYAAEVMLGLEHMHSRFVVYRDLKPANILLDENGHVRISDLG 219
Query: 484 MCKEHMMDGVTTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGED 542
+ + GT Y+APE++ Q Y S DW+++G +LY++L G PF +
Sbjct: 218 LACD--FSKKRPHASVGTHGYMAPEVLMKGQSYDSSADWFSFGCMLYKLLKGHSPFRQHN 45
Query: 543 EDE 545
+ +
Sbjct: 44 QGQ 36
>09606
Length = 1300
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 33/298 (11%)
Frame = -3
Query: 334 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 393
++ +F LGKG + RKGT AI ++K + +V T+ ++
Sbjct: 1124 TRMENFVLYEELGKGEHSIIYKGRRKGTINFVAIHCIEK---CKRPEVTNTVRMTHDIS- 957
Query: 394 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFF 453
P + Q H ++T + L+ V+E GG L + Q E + + GL +
Sbjct: 956 ---HPNVVQFHEWYETSNHLWLVVELCTGGSLADILAQDHHLPETSIRDFGIHLVTGLHY 786
Query: 454 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK-------------------------EH 488
+H GI++ DL+ V+LD+ G +K ADFG+ K E
Sbjct: 785 IHSLGILFHDLRPSKVLLDTSGVLKFADFGLSKVEGENLEELFFKFAEAGDQWNIQSAEE 606
Query: 489 MMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 548
MM V T G+P Y+APE+ D WA G + YEM +G PPF GE D
Sbjct: 605 MMKQVPT---SGSPTYMAPEVFQGAEPSIMSDLWALGCVFYEMFSGHPPFLGETYDITKD 435
Query: 549 SIMEHNVSYPK--------SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFR 598
++ PK S E +++ + L+ K +RL + +HAF++
Sbjct: 434 KVLNKEFPLPKVKGSRLSAKPSPEFLNLLESLLQKDSTRRLSWA-----SLVKHAFWQ 276
>17722
Length = 680
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 67/100 (67%)
Frame = -3
Query: 519 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPA 578
VDWW GV++YEM+ G+ PF D D LF+ I+ NV +P++LS+EA ++ GL+ K+P
Sbjct: 678 VDWWGTGVVMYEMMCGRLPFYNRDHDVLFELILLQNVKFPRNLSEEAKTLLSGLLAKNPK 499
Query: 579 KRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKV 618
+RLG +++ H FF+ I+W+ L ++I PP+KP V
Sbjct: 498 RRLGGSEADVTEIKTHPFFQCINWDDLAAKKITPPWKPDV 379
>13066
Length = 551
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 9/160 (5%)
Frame = +3
Query: 375 VIQDDDVECTMVEK---RVLALLDK--PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI 429
+I + VEK R L LL K P++ Q+HS Q + + M + GDL+ +I
Sbjct: 72 IIDKEKAPVDFVEKFFPRELDLLTKLDHPYIIQIHSILQRXPKNFIFMRFAERGDLLTYI 251
Query: 430 QQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGM---CK 486
Q+VG KE QA + +++ L +LH + +RDLK +N++L S ++K+ADFG C
Sbjct: 252 QEVGFVKEKQAKIWFYQMTTALNYLHSYDVAHRDLKCENILLSSHFNVKLADFGFACACI 431
Query: 487 EHMMDGVTTRTFCGTPDYIAPEIIAYQPYG-KSVDWWAYG 525
+ +RT+CG+ Y APEI+ PY K D W+ G
Sbjct: 432 TESGEKYMSRTYCGSAAYAAPEIVYGAPYAPKVADAWSLG 551
>14420
Length = 528
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 81/148 (54%)
Frame = +2
Query: 395 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFL 454
++ P + + + L+ VME++ GG L + + E Q E L FL
Sbjct: 71 NQNPNIVNYLDSYLVGEELWVVMEFLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFL 247
Query: 455 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQP 514
H+ +I+RD+K DN++L +G +K+ DFG C + + T GTP ++APE++ +
Sbjct: 248 HENQVIHRDIKSDNILLGMDGSVKLTDFGFCAQLSPEQSKRSTMVGTPYWMAPEVVTRKQ 427
Query: 515 YGKSVDWWAYGVLLYEMLAGQPPFDGED 542
YG +VD W+ GV+ EM+ G+PP+ E+
Sbjct: 428 YGPTVDIWSLGVMCIEMIEGEPPYLNEN 511
>18921
Length = 697
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 4/203 (1%)
Frame = +2
Query: 339 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 398
F+ L LG+GS+G V + K T ++ AIK V D D++ + E ++ D
Sbjct: 35 FDILGKLGEGSYGSVFKSLHKETGQVLAIK-----QVPVDTDLQEIIKEISIMQQCDSKY 199
Query: 399 FLTQLHSCFQTVDRLYFVMEYVNGG---DLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH 455
+ S F+ D L+ VMEY G D+M + +E + Y GL +LH
Sbjct: 200 IVKYYGSYFKNTD-LWIVMEYCGAGSVSDIMRLRNKTLVEREIATILYYT--LKGLXYLH 370
Query: 456 KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR-TFCGTPDYIAPEIIAYQP 514
R I+RD+K N++L++EGH K+ADFG+ + + D + R T GTP ++APE+I
Sbjct: 371 SRRKIHRDIKAGNILLNNEGHAKLADFGVAGQ-LTDTMAKRNTVIGTPYWMAPEVIQEIG 547
Query: 515 YGKSVDWWAYGVLLYEMLAGQPP 537
Y D W+ G+ EM G+PP
Sbjct: 548 YDCVADIWSLGITALEMAEGKPP 616
>06405
Length = 1965
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Frame = +1
Query: 318 ISPSEDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQ 377
+SP DR + ++ T+ LG G +G V A K ++ A+K LK+D +
Sbjct: 223 VSPEPDRWE-------IERTEIAMKHRLGGGQYGDVYEAMWKRYNKIVAVKTLKEDTMAL 381
Query: 378 DDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE 437
+D +E + K + K P L QL Y V E++ G+L+ +++ + +
Sbjct: 382 NDFLEEAAIMKEM-----KHPNLVQLLGVCTREPPFYIVTEFMPHGNLLDYLRSSTREEN 546
Query: 438 -PQAVFY-AAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT 495
P A+ Y A +I+ G+ +L + I+RDL N ++ +K+ADFG+ + D T
Sbjct: 547 GPTALMYMATQIASGMAYLETKNFIHRDLAARNCLVADSNMVKVADFGLARLMKDDTYTA 726
Query: 496 RTFCGTP-DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQ 548
P + APE +A+ + D WA+GVLL+E+ G P+ G + E++
Sbjct: 727 HIGAKFPIKWTAPEGLAFNRFSTRSDIWAFGVLLWELATYGMSPYPGVELTEVYH 891
>15910
Length = 1361
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 7/165 (4%)
Frame = +2
Query: 424 DLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVM---LDSEGHIKIA 480
+L I G++ E A ++I G+ ++H G+++RDLK +N++ + + +K+A
Sbjct: 422 ELFDRIVTRGQYTEKDAARAISDILHGVQYIHANGVVHRDLKPENLLYECMTDDSKLKLA 601
Query: 481 DFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 540
DFG+ + + V T CGTP Y APE++ Y SVD W+ GV+ Y +L G PF
Sbjct: 602 DFGLSR-IIEPEVQMSTVCGTPGYCAPEVLKGDKYTPSVDMWSVGVIAYILLCGYEPFFA 778
Query: 541 EDEDELFQSIM----EHNVSYPKSLSKEAVSICKGLMTKHPAKRL 581
E+E E+++ I+ + + Y +S+ A + + L+ P KRL
Sbjct: 779 ENEFEMYRKIIKGEYKFDEEYWSEISENAKDVVRKLLVIDPKKRL 913
>00300
Length = 2318
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 12/248 (4%)
Frame = -1
Query: 345 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECT--MVEKRVLALLDKPPFLTQ 402
+G+G FGKV A T EL A+K +K Q +D++ M ++ + + L +
Sbjct: 1634 IGEGQFGKVYTAVNMSTGELMALKEMK----FQPNDLQQLREMCDEIKIFEGIQHENLVK 1467
Query: 403 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF--YAAEISIGLFFLHKRGII 460
+ D + MEY + G I++ K P+ + Y EI + + LH+ I+
Sbjct: 1466 YYGVEVHKDEMLMFMEYCDTGT----IEEAAKMGLPEYLIRRYTREIVLAVNHLHENSIV 1299
Query: 461 YRDLKLDNVMLDSEGHIKIADFG---MCKEHMMDGVTTRTFCGTPDYIAPEIIAYQP--- 514
+RD+K N+ L S GH+K+ DFG K H GT Y+APE+
Sbjct: 1298 HRDIKGANIFLTSNGHVKLGDFGCSVKLKSHTTMPGEFHNLVGTTAYMAPEVFTQNDQGG 1119
Query: 515 YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE--LFQSIMEHNVSYPKSLSKEAVSICKGL 572
YG++ D W+ G ++ EM G+ P+ D + +++ + H + P SLS E +
Sbjct: 1118 YGRAADIWSLGCVVIEMATGKRPWHDLDNNYQIMYKVGIGHKPAVPDSLSVEGKHFLDLI 939
Query: 573 MTKHPAKR 580
M PA+R
Sbjct: 938 MCHDPAQR 915
>13592
Length = 980
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 11/248 (4%)
Frame = +2
Query: 345 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD--KPPFLTQ 402
+G+G FGKV A T EL A+K ++ IQ + L +L+ K L +
Sbjct: 8 IGQGRFGKVYTAVNNNTGELMAMK----EIAIQPGETRALKNVAEELKILEGIKHKNLVR 175
Query: 403 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYR 462
+ + L ME + G L ++ G E + + A++ G+ LHK GI++R
Sbjct: 176 YYGIEVHREELLIFMELCSEGTLESLVELTGGLPEALSRRFTAQLLSGVAELHKHGIVHR 355
Query: 463 DLKLDNVML-DSEGHIKIADFGMC---KEHMMDGVTTRTFCGTPDYIAPEIIA---YQPY 515
D+K N+ L D +K+ DFG + H + + GT Y+APE+ +
Sbjct: 356 DIKTANIFLVDGSNSLKLGDFGSAVKIQAHTTVPGELQGYVGTQAYMAPEVFTKTNSDGH 535
Query: 516 GKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQSIMEHNVSYPKSLSKEAVSICKGLM 573
G+ D W+ G ++ EM +G+ P+ D + +F+ M P+SLS+E +
Sbjct: 536 GRLADIWSVGCVVVEMASGKRPWAQFDSNFQIMFKVGMGEKPQAPESLSQEGHDFIDHCL 715
Query: 574 TKHPAKRL 581
P +RL
Sbjct: 716 QHDPKQRL 739
>01707
Length = 757
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 5/220 (2%)
Frame = +1
Query: 332 DRV-KLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDV--ECTMVEK 388
DRV ++ + + +G+GS+G V K T +L AIK K V +DD + + M E
Sbjct: 46 DRVDRMEKYEKIGKIGEGSYGVVFKCRNKETSQLVAIK---KFVESEDDPLIKKIAMREI 216
Query: 389 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 448
R+L L K P L +L F+ RL+ V +YV+ L + EP +
Sbjct: 217 RMLKQL-KHPNLVRLIEVFRRKKRLHLVFDYVDHTLLNELDRYPRGLPEPMVKRIIYQTL 393
Query: 449 IGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPE 508
+ + F H+ I+RD+K +N+++ +G +K+ DFG + G + T Y APE
Sbjct: 394 LAVNFCHQYNTIHRDVKPENILITRQGQVKLCDFGFARILTGPGDEYTDYVATRWYRAPE 573
Query: 509 -IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE-DEDEL 546
++ YG VD WA G + E+L GQ + G D D+L
Sbjct: 574 LLVGDTQYGPPVDVWAIGCVFAELLTGQALWPGRSDVDQL 693
>01392
Length = 1806
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 43/218 (19%)
Frame = -1
Query: 433 GKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVM---LDSEGHIKIADFGMCKEHM 489
G E +A I+ L FLH +GI +RDLK +N++ LD +KI DF +
Sbjct: 1806 GHLCEREASLVVRHIARALDFLHSKGIAHRDLKPENILCEHLDDVVPVKICDFDLASGIS 1627
Query: 490 MDGVTTRTF-----CGTPDYIAPEIIAYQ-----PYGKSVDWWAYGVLLYEMLAGQPPF- 538
DG T+T G+ +Y+APE++ Y K D W+ G++LY ML G PPF
Sbjct: 1626 CDGDGTKTPELLTPVGSAEYMAPEVVDAWVGDSFSYDKRCDLWSLGIILYIMLCGYPPFY 1447
Query: 539 --DGED------------EDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPAKR 580
GED +D LF SI + + +P S+S A + + L+ + P KR
Sbjct: 1446 GQCGEDCGWNRGEACHDCQDMLFNSIQDGHYKFPSQEWTSISSSAKDLIRHLLVREPRKR 1267
Query: 581 LGCG-----------PEGERDVREHAFFRRIDWEKLEN 607
P + H R + LEN
Sbjct: 1266 YSAADVLKHPWICTPPAATQLATPHVLTRNNSMKDLEN 1153
>21808
Length = 1011
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Frame = +1
Query: 366 AIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL 425
AIK LK + D + + K++ + P L QL++ D ++ + E + G L
Sbjct: 31 AIKTLKSGTMDPKDFLAEAQIMKKL-----RHPKLIQLYAVCTQDDPIFIITELMKNGSL 195
Query: 426 MYHIQQVGK-FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGM 484
+ +Q G+ K P + A+I+ G+ +L + I+RDL N+++ +KIADFG+
Sbjct: 196 LEFLQGKGRVLKLPALIDIGAQIACGMAYLESQNYIHRDLAARNILVSDNNTVKIADFGL 375
Query: 485 CKEHMMDGVTTRTFCGTP-DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGED 542
+ D R P + APE Y + D W++G+LL E + G+ P+ G
Sbjct: 376 ARVIKEDEYEARVGARFPIKWTAPEAANYNRFTIKSDVWSFGILLTETVTYGRVPYPGMT 555
Query: 543 EDELFQSIMEHNVSYP 558
E+ + EH P
Sbjct: 556 NAEVLHQV-EHGYRMP 600
>01060
Length = 1800
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 8/221 (3%)
Frame = +1
Query: 336 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 395
LTDF +G+G++G V + T A+K K + +D V + + + +
Sbjct: 79 LTDFQ---KIGEGTYGVVYKCRHRATGRKLAMK--KIRLRGSEDGVPSSAIREIAMLREL 243
Query: 396 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAV------FYAAEISI 449
+ + L +RL+ V E+++ MY + KF E + Y +I
Sbjct: 244 RHTNIVCLEDVIMEDERLFLVFEFLSMDLKMY----IDKFPEGVVLDRRLVKSYVFQIVT 411
Query: 450 GLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEI 509
G+ F H+R I++RDLK N++++ G IKIADFGM + + T Y APEI
Sbjct: 412 GIXFCHQRRIVHRDLKPQNLLINHTGAIKIADFGMARTFALPVRAYTHEVVTLWYRAPEI 591
Query: 510 I-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQ 548
+ Y VD W+ G + +ML P F G+ E D+LF+
Sbjct: 592 LMGASKYSTPVDVWSIGTIFADMLIRTPIFKGDSEIDQLFK 714
>21079
Length = 878
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Frame = +1
Query: 398 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYH-IQQVGKFKEPQAVFYAAEISIGLFFLHK 456
P L L F+ + VME+V G+L I+ E V + +I G+ ++H
Sbjct: 4 PKLLMLWDAFEAPRTMVLVMEFVGAGELFERVIRDDFVLTERDCVHFVRQICSGVGYMHT 183
Query: 457 RGIIYRDLKLDNVML--DSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQP 514
+ I++ DLK +NV+ D+ IKI DFG+ + + G + + GTP++IAPE++ Y
Sbjct: 184 QSILHLDLKPENVLCVSDNSNQIKIIDFGLARFYK-PGDSLQVLFGTPEFIAPEVVNYDE 360
Query: 515 YGKSVDWWAYGVLLYEMLAGQPP 537
+ D W+ GV+ Y +L+G P
Sbjct: 361 INFTTDMWSIGVICYILLSGLSP 429
>13212
Length = 1067
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Frame = -1
Query: 437 EPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR 496
E Q + E+ + L FLH+ +I+RD+K NV+L +G +K+ADFG+ ++
Sbjct: 983 EAQICYVCHEMCMALDFLHRHHVIHRDIKAGNVLLTIDGEVKLADFGVSAKNTQTQQKRD 804
Query: 497 TFCGTPDYIAPEIIAYQ-----PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 551
TF GTP ++APE++ + PY D W+ GV L E +PP E + ++
Sbjct: 803 TFIGTPYWMAPEVVLCETLKDTPYDFKADIWSLGVTLIEFAQIEPP---NKEMHPMRVLI 633
Query: 552 EHNVSYPKSLS--KEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRR 599
+ + S P +L K+ + K + K K P ++ EH F +R
Sbjct: 632 KIHKSDPPTLEKPKKWTKLFKDFIAKCLVKDPNLRPTA-AELLEHPFMKR 486
>29581
Length = 1278
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 31/222 (13%)
Frame = -2
Query: 408 QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLD 467
+++D L+ VMEY F E Q ++ GL +LH+ II+RDLK+
Sbjct: 1139 KSLDSLFLVMEYCEQDLASLLDNMPAPFSESQVKCIVLQLLKGLRYLHEAFIIHRDLKVS 960
Query: 468 NVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEII-AYQPYGKSVDWWAYGV 526
N+++ +G +KIADFG+ + + T Y APE++ + + ++D W+ G
Sbjct: 959 NLLMTDKGCVKIADFGLARNYGKPQKPMTPKVVTLWYRAPELLFGSKTHSTAIDMWSAGC 780
Query: 527 LLYEMLAGQPPFDGEDEDELFQSIME-----HNVSYP----------------------- 558
+L E+L +P G + + + IME ++ +P
Sbjct: 779 ILGELLGHKPLMPGRSDLQQIELIMELLGTPNDTIWPGFSQLPAFEQFTLKKQPYNNLRH 600
Query: 559 --KSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFR 598
LS+ + + GL HP KR D EH++F+
Sbjct: 599 TFPWLSESGIRLLNGLFMYHPQKR-----ATAEDCLEHSYFK 489
>14126
Length = 1265
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Frame = +3
Query: 344 VLGKGSFGKVMLA-DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL------DK 396
V+G G++G V A D + E A+K ++ + + + M+ R +++L +
Sbjct: 210 VIGNGAYGTVYKARDLRNQGEFVAMKRIR----LNNTEEGMPMMAIREISMLKQLEQYEH 377
Query: 397 PPFLTQLHSCFQTVD----RLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF-YAAEISIGL 451
P + L T+ RL V EY+ Y + P + ++ G+
Sbjct: 378 PNVVRLLDVSHNTITDREIRLNLVFEYIEHDLATYLAKCPSPGLGPDRIKDLMLQLLNGV 557
Query: 452 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIA 511
FLH I++RDLK N+++ +G +K+ADFG+ + + T T T Y +PE++
Sbjct: 558 DFLHSNRIVHRDLKPQNLLISKDGRLKLADFGLARIYSFHMALT-TVVVTLWYRSPEVLM 734
Query: 512 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 552
YG SVD W+ G + E+ + F G E + + I E
Sbjct: 735 QAEYGTSVDIWSCGCIFAELFTRRALFKGSSEFDQLKKIFE 857
>01756
Length = 1858
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 17/251 (6%)
Frame = -3
Query: 319 SPSEDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD 378
SP E K P + D + L +G+G+FG+V A K T+++ A+K V+ D
Sbjct: 1784 SPYETLKFPFCDED----AKYEKLAKIGQGTFGEVFKARCKKTKQVVAMK-----KVLMD 1632
Query: 379 DDVE----CTMVEKRVLALLDKPPFLTQLHSC---FQTVDR----LYFVMEYV--NGGDL 425
++ E + E ++L LL+ + + C + +R Y V E+ + L
Sbjct: 1631 NEKEGFPITALREIKILQLLNHENVVDLIEICSTKATSANRYKSMFYLVFEFCEHDLAGL 1452
Query: 426 MYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMC 485
+ ++ V F P+ ++ GL+++H+ I++RD+K N+++ +G +K+ADFG+
Sbjct: 1451 LSNMSVV--FNLPEIKEVMKQLMNGLYYIHRNKILHRDMKAANILITKQGVLKLADFGLA 1278
Query: 486 KEHMMDGVTTRTFCG---TPDYIAPE-IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 541
+ ++ + T Y PE ++ + Y ++D W G ++ EM P G
Sbjct: 1277 RAFSVNLRQPNRYTNRVVTLWYRPPELLLGDRNYSTAIDQWGAGCIMAEMWTRNPIMQGT 1098
Query: 542 DEDELFQSIME 552
E I +
Sbjct: 1097 TEQNQLTLITQ 1065
>27546
Length = 426
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%)
Frame = -1
Query: 387 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAE 446
E +L LD P + Q+HS Q +++ M Y GD++ HI++ G E Q + +
Sbjct: 330 ELEILTRLDHPN-IIQIHSILQRGPKIFIFMRYAEKGDMLSHIKKTGPIDEAQTKVWFFQ 154
Query: 447 ISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 486
++ L +LH I +RDLK +N++L ++KIADFG +
Sbjct: 153 MAKALQYLHSHDIAHRDLKCENILLSKRLNVKIADFGFAR 34
>16549
Length = 607
Score = 69.7 bits (169), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = +2
Query: 171 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFK 230
+ LH+ V ++L L PYVK L+PDP+ ++K+KTK ++ +++P +NE ++
Sbjct: 2 DSLHIMVMHVRDL--ARSAELPSPYVKTYLLPDPEKQTKRKTKIVKHSVHPTFNEVLQYR 175
Query: 231 LKPSD-KDRRLSVEIWDWDRTTRNDFMGSLSFGVSEL-MKMPASGWYKL 277
+K ++ + R L V +WD D N+F+G++ + +L + + WY L
Sbjct: 176 MKETETRHRTLQVTVWDHDMLKENNFLGAVYLRLRDLELSDDTAKWYTL 322
>28638
Length = 1458
Score = 52.8 bits (125), Expect(2) = 4e-12, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = -1
Query: 443 YAAEISIGLFFLH--KRGIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMMDGVTTRTF 498
+A ++ L FL + II+ DLK +N++L + IKI DFG G +
Sbjct: 822 FAQQLCTALLFLATPEMNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQY 652
Query: 499 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 538
+ Y +PE++ PY ++D W+ G +L EM G+PP
Sbjct: 651 IQSRFYRSPEVLLGVPYDLAIDMWSLGCILVEMHTGEPPL 532
Score = 36.6 bits (83), Expect(2) = 4e-12, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Frame = -3
Query: 292 EGDEEGNMELR---QKFEKAKLGPAGNKVISPSEDRKQPSNNLDRVKLTDFNFLMVLGKG 348
+GDE GN + + F + +I+P E LDR ++ ++GKG
Sbjct: 1258 QGDESGNKKNKVNIHVFNDGYDDSNHDYIINPGEKW------LDRYEIDS-----LIGKG 1112
Query: 349 SFGKVMLADRKGTEELYAIKILK-KDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCF 407
SFG+V+ A G +E AIKI+K K + +E ++E D ++ +L F
Sbjct: 1111 SFGQVVKAYDHGDQEQVAIKIIKNKKPFLNQAQIEVKLLELMNRHDADNXYYIVRLKRHF 932
Query: 408 QTVDRLYFVME 418
+ L V E
Sbjct: 931 MFRNHLCLVFE 899
>21433
Length = 590
Score = 68.9 bits (167), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 59/96 (61%)
Frame = +2
Query: 443 YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTP 502
Y ++S L + H R +I+RD+K +N++L +G +KIADFG H T T CGT
Sbjct: 182 YIYQLSSALEYCHYRKVIHRDIKPENLLLGLKGDLKIADFGW-SVHAPSSRRT-TMCGTL 355
Query: 503 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 538
DY+ PE++ + + ++VD W+ GVL YE L G PP
Sbjct: 356 DYLPPEMVEGKTHDENVDLWSLGVLCYEFLVGTPPL 463
>19094
Length = 898
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +1
Query: 450 GLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR-TFCGTPDYIAPE 508
GL +LH R I+RD+K N++L++EGH K+ADFG+ + + D + R T GTP ++APE
Sbjct: 94 GL*YLHSRRKIHRDIKAGNILLNNEGHAKLADFGVAGQ-LTDTMAKRNTVIGTPYWMAPE 270
Query: 509 IIAYQPYGKSVDWWAYGVLLYEMLAGQ 535
+I Y D W+ G+ EM G
Sbjct: 271 VIQEIGYDCVADIWSLGITALEMAEGN 351
>32957
Length = 645
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = +3
Query: 482 FGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 535
F +C E G TRTFCGT +Y+APE+ + YGK VDWW G+LL+E+LA Q
Sbjct: 3 FALCVEK--SGGRTRTFCGTREYMAPEVHERKEYGKEVDWWGLGILLHELLAAQ 158
>00392
Length = 668
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Frame = +3
Query: 413 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVF---YAAEISIGLFFLHKRG--IIYRDLKLD 467
+ V E + G L +++ +FK+P + ++ GL+FLH R +I+RDLK D
Sbjct: 171 IILVTELMTSGTLKTYLK---RFKKPNVKILKNWCRQVLKGLYFLHTRTPPVIHRDLKCD 341
Query: 468 NVMLDS-EGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGV 526
N+ + G +KI D G+ + + ++ GTP+++APE+ + Y ++VD +A+G+
Sbjct: 342 NIFITGPTGSVKIGDLGLAT--LKNQSFAKSVIGTPEFMAPEMYE-EHYDEAVDVYAFGM 512
Query: 527 LLYEMLAGQPPF-DGEDEDELFQSIMEHNVSYPKSLSKEAVS 567
+ EM + + P+ + + ++++ + + P++L K A++
Sbjct: 513 CMLEMASSEYPYSECSNAAQIYKRVTSGVL--PEALDKVAIT 632
>14116
Length = 1017
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Frame = -1
Query: 336 LTDFNFLMV---LGKGSFGKV-----MLADRKGTEELYAIKILKKDVVIQDDDVECTMVE 387
L D FL + +GKG+FG V L ++KG + L A+K L + ++ +++ + E
Sbjct: 648 LIDREFLTMGEEIGKGNFGCVKRGFLTLPEQKG-DILVAVKTLHNNNP-REIELQSFLQE 475
Query: 388 KRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI---QQVGKFKEPQAVFYA 444
++ LT + C D V+ ++ GDL+ +I Q K+ + Y
Sbjct: 474 ALIMKDFHHSNVLTLIGICLNLDDMPLVVLPFMKHGDLLTYIRDDQHQPTIKD--LIMYG 301
Query: 445 AEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPD- 503
+I+ G+ +L ++RDL N MLD + H+K+ADFG+ ++ + + + + +
Sbjct: 300 VDIARGMDYLAGLKFVHRDLAARNCMLDEDFHVKVADFGLARD-----IYEKEYYSSENK 136
Query: 504 -------YIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 533
++A E + Y D W+YGV+L+E+L
Sbjct: 135 KAKLPVKWMALESLEKGNYDSKTDVWSYGVVLWELLT 25
>04852
Length = 1462
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Frame = +1
Query: 366 AIKILKKDV--VIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGG 423
A+K+L+ V V + D V+ V K V + + L C Q L+ ++E+ G
Sbjct: 31 AVKMLRDIVTAVEEQDFVQELQVMKAVKKMGSHINIVNFLGCCTQG-GPLWVIVEFAKNG 207
Query: 424 DLMYHIQQV-------GKFKEPQ------------------AVFYAAEISIGLFFLHKRG 458
+L ++ GKF PQ + YA +I+ G+ FL R
Sbjct: 208 NLRDFLESCRDGINGYGKFVSPQDPGWYTKTPGGHVIRRKNLLSYAFQIARGMEFLASRK 387
Query: 459 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTP-DYIAPEIIAYQPYGK 517
I+RDL NV++ E +KIADFG+ + D R+ P ++APE + Y
Sbjct: 388 CIHRDLAARNVLVTEEHVLKIADFGLSRTG--DYYKKRSGGRLPVKWMAPEALFDMRYTT 561
Query: 518 SVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQSIMEHNVSYPK 559
D W++GV+L+E+ + G P+ +EL+ +++ P+
Sbjct: 562 KSDVWSFGVVLWEIFSLGGMPYASIPNEELYSKLLDDAYRMPR 690
>37602
Length = 804
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -1
Query: 411 DRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDN 468
++L+ MEY GG + +YH+ G EPQ F E GL +LH+RG ++RD+K N
Sbjct: 300 EKLWIAMEYCGGGSMQDIYHV--TGPLTEPQIAFVCRETLKGLHYLHRRGKMHRDIKGAN 127
Query: 469 VMLDSEGHIKIADFGMCKEHMMDGVTTRTF 498
++L EG +K+ADF + V + F
Sbjct: 126 ILLTEEGDVKLADFWRVSSNHSHNVQKKVF 37
>29179
Length = 1113
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Frame = -3
Query: 148 PSLCGMDHTEKRGRIYLKAEVTDEKLHVTVR--DAKNLIPMDPNGLSDPYVKLKLIPDPK 205
P + G+D+ K GRI + L +T+R A +L D G SDPYVK+ L+PD K
Sbjct: 568 PIVEGVDY--KLGRIQFGLMYDFQNLTLTLRIIRAVDLPAKDVTGTSDPYVKILLLPDKK 395
Query: 206 NESKQKTKTIRSTLNPQWNESFTFKLKPSDK--DRRLSVEIWDWDRTTRNDFMGSLSFGV 263
+ K TK + LNP WNE F F+ P +K ++ L +++ D+DR +R+D +G +
Sbjct: 394 H--KLLTKVKKRNLNPHWNECFLFEGWPHNKLLEKTLYLQVIDYDRFSRDDPIGETYLPL 221
Query: 264 SE--LMKMPASGWY 275
+E L + P S Y
Sbjct: 220 NEIDLSQSPVSWKY 179
>04591
Length = 1117
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = -2
Query: 445 AEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDY 504
+++ GLF++H + I++RD+K N++L +G +K+ADFG+ + + T T Y
Sbjct: 876 SQLLNGLFYIHTKQILHRDIKAANILLTRDGVLKLADFGLSRPWVKSKRLTNRVV-TLWY 700
Query: 505 IAPE-IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 552
PE ++ + YG +D W G ++ EM + +P G E I +
Sbjct: 699 RPPELLLGEREYGPEIDMWGVGCIMAEMWSRKPLMQGRSEQHQLSLITD 553
>17591
Length = 474
Score = 51.6 bits (122), Expect(2) = 3e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Frame = +3
Query: 579 KRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGK-GAENFDKFFTRGQPV- 636
+RLG + E +++E AFF I+W+ L N+++QPP+ P V G+ +FD F R +PV
Sbjct: 153 ERLGAKRDFE-EIQEKAFFADINWDDLYNKKVQPPYNPNVSGQLDLRHFDPEFVR-EPVP 326
Query: 637 -------LTPPDQLVIANIDQSD--FEGFSYVNP 661
+LV A++ ++D F+GFSYV P
Sbjct: 327 ASVGRSGGGSSSKLVSASVMEADAVFDGFSYVPP 428
Score = 31.6 bits (70), Expect(2) = 3e-10, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 529 YEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLG 582
+EML G PPF D E++++I+ + ++S +I + L+ K G
Sbjct: 2 FEMLYGLPPFYSRDTSEMYENILYKPLRLRTNVSAAGRNILEELLKKEKGGETG 163
>09007
Length = 1440
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 13/238 (5%)
Frame = -1
Query: 345 LGKGSFGKVMLA---DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 401
LG+G FG V A G + A+K L KD + +D + + E ++ +LD +
Sbjct: 855 LGQGHFGTVRQAIWTAESGEKVQVAVKCLSKDKIHKDG--QEFLKETAIMQMLDHENIVR 682
Query: 402 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISIGLFFLHKRG 458
+ V E L+ +++V F P+ ++ ++ G+ +L +
Sbjct: 681 VYGVVMDNGADIMLVTELAPMRSLLECVKEVSARVDFSVPRLCDFSQQVCDGMSYLESKR 502
Query: 459 IIYRDLKLDNVMLDSEGHIKIADFGMC------KEHMMDGVTTRTFCGTPDYIAPEIIAY 512
+++RDL N++L S+ +KI+D G+ KE+ T + APE
Sbjct: 501 LVHRDLAARNILLFSKSKVKISDVGVSGALGAGKEYYQSQQTIH-LQNAVAWCAPESFRN 325
Query: 513 QPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSIC 569
+ + D WA+GVLL+E G P+ G + Q IME V P+S E +C
Sbjct: 324 LCFSSASDVWAFGVLLWEFFTHGFQPWAGLNG----QQIME-AVDAPQSQRLEQPDLC 166
>11185
Length = 473
Score = 62.4 bits (150), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 25/117 (21%)
Frame = +1
Query: 443 YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---------------- 486
+ + GL ++H GI++ DL+ V+LD+ G +K ADFG+ K
Sbjct: 16 FGIHLVTGLHYIHSLGILFHDLRPSKVLLDTSGVLKFADFGLSKVEGENLEELFFKFAEA 195
Query: 487 ---------EHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 534
E MM V T G+P Y+APE+ D WA G + YEM +G
Sbjct: 196 GDQWNIQSAEEMMKQVPTS---GSPTYMAPEVFQGAEPSIMSDLWALGCVFYEMFSG 357
>38560
Length = 479
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = -3
Query: 497 TFCGTPDYIAPEIIAYQPY-GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV 555
T CG+P Y APE+I+ Y G D W+ GVLLY +L G PFD E L Q +
Sbjct: 408 TCCGSPAYAAPELISGLEYLGSEADIWSMGVLLYALLCGYLPFDDEKXSHL*QKNQKRKD 229
Query: 556 SYPKSLSKEAVSICKGLMTKHPAKRL 581
P+ LS++ + +G++ P+ R+
Sbjct: 228 EVPEWLSEDTTKLLEGMLQTDPSHRI 151
>07940
Length = 1336
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Frame = -3
Query: 428 HIQQVGKFKEPQ-AVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 486
H Q + K P+ + YA +++ G+ +L + I+RDL NV++ E +KIADFG+ +
Sbjct: 380 HRQDMLKMLTPKDLISYAYQVARGMEYLASKQCIHRDLAARNVLVAEEYVLKIADFGLTR 201
Query: 487 EHMMDGVTTRTFCGT--PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDE 543
+T G ++APE + + Y D W+YGVLL+E+ G P+
Sbjct: 200 NLQQFDYYRKTTDGRLPVKWMAPEALFDRKYTSKSDVWSYGVLLWEIFTLGGNPYPSVPV 21
Query: 544 DELF 547
++LF
Sbjct: 20 EDLF 9
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = -3
Query: 345 LGKGSFGKVMLADRKG-----TEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 399
LG+G+FG VM + G A+K+LK+D D ++ + E ++ ++ K
Sbjct: 818 LGEGAFGLVMKGEAMGIFKDNNSVTVAVKMLKEDAT--DREMMDLIREMEMMKVIGKHKN 645
Query: 400 LTQLHSCFQTVDRLYFVMEYVNGGDL 425
+ L C LY ++E+ G+L
Sbjct: 644 IINLLGCCTQRGALYVIVEFAPHGNL 567
>26711
Length = 405
Score = 58.9 bits (141), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = -2
Query: 454 LHKRGIIYRDLKLDNVML--DSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIA 511
+H +G+++ DLK N++L D +++ DFG+ ++ + T GTP + +PE +
Sbjct: 368 VHAQGVVHMDLKPSNLLLSGDKLDSVQLIDFGLARK-LYPPQETFLNHGTPGFTSPEALD 192
Query: 512 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 545
+P + D W GVL Y +L+GQ PF + E
Sbjct: 191 VKPISTASDVWGVGVLAYILLSGQSPFQADSATE 90
>12672
Length = 773
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = +3
Query: 450 GLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFG-MCKEHMMDGVTTR---TFCGTPDYI 505
G+ +L+ G ++RD+K N++LDSE K+ DF + +G T + GT Y+
Sbjct: 27 GIQYLNDNGHVHRDIKTANILLDSEYTAKVGDFATVVSAPSGEGKTVQNASVVIGTAAYL 206
Query: 506 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSL 561
APE I + K +D +++GV+L E++ G D E+ S + NV P+ +
Sbjct: 207 APEAIHFDVSTK-LDSYSFGVVLLEVITGLVAQDYSREERTLSSHIMENVEEPEEI 371
>30339
Length = 384
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -2
Query: 319 SPSEDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKG 360
SPS DR + S DR L DFNF+ VLGKGSFGKVMLA+RKG
Sbjct: 119 SPSSDRGRSS---DRFHLHDFNFIKVLGKGSFGKVMLAERKG 3
>31935
Length = 554
Score = 56.6 bits (135), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = -3
Query: 154 DHTEKRGRIYLKAEVTDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTK 213
+H R ++ + +KL VT+ N+ DP+ + DPYVKL L+P ESK+KT
Sbjct: 549 EHGLGRIQLTITYSAQRQKLDVTIHKIMNIPLRDPSSIPDPYVKLHLLPGRSKESKRKTS 370
Query: 214 TIRSTLNPQWNESFTFKLKPSD 235
I+ NP ++ SF + + S+
Sbjct: 369 IIKDNCNPVYDASFEYLISISE 304
>35187
Length = 593
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = -3
Query: 37 HKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSC 86
H F + F +PT+C HCTD +WG G+ C+VC FVVH RC + V C
Sbjct: 315 HFFTKKTFHKPTYCHHCTDILWGLIGVGYVCEVCNFVVHDRCMKTVVSPC 166
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = -3
Query: 93 PDTDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLC 151
P D H F T+ PT+C HC +L+GLI G C+ C+ VH +C+ V S C
Sbjct: 342 PVPPDHGHGHFFTKKTFHKPTYCHHCTDILWGLIGVGYVCEVCNFVVHDRCMKTVVSPC 166
>17300
Length = 480
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Frame = +1
Query: 447 ISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE---HMMDGVTTRTFCGTP- 502
IS G+ L G ++RDL N++++ K+ADFG+ +E +G T P
Sbjct: 1 ISSGMGXLADMGYVHRDLAARNILVNEILVCKVADFGLSREIESDTTEGAYTTKGGKIPV 180
Query: 503 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPF 538
+ APE IAY+ + + D W++GV+++E+++ G+ P+
Sbjct: 181 RWTAPEAIAYRKFTSASDVWSFGVVMWEVMSYGERPY 291
>01966
Length = 1735
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Frame = -1
Query: 411 DRLYFVMEYVNGGDLMYHIQQVGKFKEPQAV------FYAAEISIGLFFLHKRGIIYRDL 464
+RL+ V E+++ MY + KF E + Y +I G+ F H+R I++RDL
Sbjct: 1495 ERLFLVFEFLSMDLKMY----IDKFPEGVVLDRRLVKSYVFQIVTGINFCHQRRIVHRDL 1328
Query: 465 KLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEII 510
K N++++ G IKIADFGM + + T Y APEI+
Sbjct: 1327 KPQNLLINHTGAIKIADFGMARTFALPVRAYTHEVVTLWYRAPEIL 1190
>03508
Length = 1463
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Frame = +1
Query: 415 FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE 474
+ E+VN D Q F + FY E+ L F H GI++RD+K NVM+D E
Sbjct: 811 LIFEHVNNTDFK---QLYQTFTDYDIRFYLYELMKALDFCHSMGIMHRDVKPHNVMIDHE 981
Query: 475 G-HIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIA-YQPYGKSVDWWAYGVLLYEML 532
+++ D+G+ E G+ + + PE++ YQ Y S+D W+ G + M+
Sbjct: 982 NKKLRLIDWGLA-EFYHPGMEYNVRVASRYFKGPELLLDYQMYDYSLDMWSLGCMFASMI 1158
Query: 533 AGQPPF 538
+ P
Sbjct: 1159FRKEPL 1176
>19761
Length = 473
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Frame = -3
Query: 428 HIQQVGKFKEPQAVFYAAEISIGLFFLHKRG--IIYRDLKLDNVMLDSEGHIKIADFGMC 485
H+ E V + + + L ++H I++RDLK N+ + +G +++ D G+
Sbjct: 453 HLGFTAGLPERLIVCWLMQTASALNYMHTHTPVILHRDLKPQNIYVTEKGDVRLGDLGLA 274
Query: 486 KEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 545
++ + GT Y++PEI++ QPY D W+ G + Y++ + G DE
Sbjct: 273 RKLTGPADFATSQVGTIMYLSPEILSQQPYNSKSDIWSLGCVFYDITGKK----GSDEMG 106
Query: 546 ----LFQSIMEHNVSYPKSLSKEAVSICKGLMTK 575
L Q + + P S+E ++TK
Sbjct: 105 VMFLLVQVMGGRKLPLPDHYSQEFRDTISRMLTK 4
>33586
Length = 551
Score = 47.4 bits (111), Expect(2) = 1e-07, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 396 KPP-FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEI 447
+PP F+ LH FQT +LY ++E++ GGDL + + F E FY AE+
Sbjct: 392 QPPLFIVHLHYAFQTEGKLYLILEFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 550
Score = 26.9 bits (58), Expect(2) = 1e-07, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 337 TDFNFLMVLGKGSFGKVMLADR 358
+ F L VLG+GSFG+V + R
Sbjct: 214 SQFELLKVLGQGSFGRVFXSGR 279
>12786
Length = 460
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 22/119 (18%)
Frame = -3
Query: 442 FYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTRTFC 499
FY E+ + LH G+I+ DLK N ML + G++K+ DFG+ D V +
Sbjct: 398 FYWREMLRAVKALHNEGVIHSDLKPANFMLVA-GNLKLIDFGIANTLQQDKTSVLKDSRV 222
Query: 500 GTPDYIAPEIIAYQ--------------------PYGKSVDWWAYGVLLYEMLAGQPPF 538
GTP Y++PE I G D W+ G +LY M+ G+ PF
Sbjct: 221 GTPSYMSPEAIMAACDDSADDSMEEDGHRTKPKYKVGVRSDVWSLGCILYNMVYGRTPF 45
>29590
Length = 320
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +3
Query: 492 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 540
G R GTPDY+APE++ Y+P D W+ GVL Y ML PF G
Sbjct: 36 GEDIRDIIGTPDYVAPEVLDYEPLSIQTDMWSLGVLSYVMLTACSPFVG 182
>04138
Length = 800
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Frame = +1
Query: 451 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCG---TPDYIAP 507
L+++H+ I++RD+K N+++ +G +K+ADFG+ + ++ + T Y P
Sbjct: 52 LYYIHRNKILHRDMKAANILITKQGVLKLADFGLARAFSVNLRQPNRYTNRVVTLWYRPP 231
Query: 508 E-IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 552
E ++ + Y ++D W G ++ EM P G E I +
Sbjct: 232 ELLLGDRNYSTAIDQWGAGCIMAEMWTRNPIMQGTTEQNQLTLITQ 369
>26525
Length = 455
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Frame = +1
Query: 182 NLIPMDPN-GLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTF 229
+L P DP+ G DPYVKL+L+P+ K+ K KT+ +R TLNP+++E+FTF
Sbjct: 1 DLPPRDPSLGGCDPYVKLQLLPEKKH--KCKTRVVRKTLNPKYDETFTF 141
Score = 29.3 bits (64), Expect = 4.8, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 180 AKNLIPMDPNGLSDPYVKL 198
++NL MD +GLSDPYVK+
Sbjct: 398 SRNLPKMDISGLSDPYVKI 454
>11353
Length = 454
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +1
Query: 102 HKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLC 151
H+F+ +TY +PT+CD C LL+G G C C N H +C VP C
Sbjct: 142 HRFEKYTYTTPTYCDFCQQLLWGFSKTGTHCVDCGYNCHDKCQPLVPKTC 291
Score = 48.5 bits (114), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 37 HKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSCPGADKGPDT 95
H+F + PT+C C +WGF K G C C + H +C V +C DT
Sbjct: 142 HRFEKYTYTTPTYCDFCQQLLWGFSKTGTHCVDCGYNCHDKCQPLVPKTCSKLKSVSDT 318
>00715
Length = 1788
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 27/157 (17%)
Frame = +1
Query: 411 DRLYFVMEYVNGGDLMY----HIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKL 466
D + MEYV +L H Q + + A +++ GL +LH I++ DLK
Sbjct: 154 DGAWLAMEYVGPLNLQTILNDHQQDI---DSSMRLSLALQMARGLHYLHSINIVHLDLKP 324
Query: 467 DNVMLDSEGHIKIADFGMCKEHM----------------------MDGVTTRTFCGTPDY 504
N +L + ++IADFG C + + G GT Y
Sbjct: 325 ANCLLTRDLKLRIADFGCCHQLTPTGLDMGEREGGMAGNELELTPVQGAWKNELAGTLAY 504
Query: 505 IAPEII-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 540
APE++ QP +S D ++ G+ L++M Q P++G
Sbjct: 505 RAPELLKGLQPSVRS-DVYSLGITLWQMCTRQGPYEG 612
>17975
Length = 449
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Frame = +3
Query: 350 FGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMV--EKRVLALLDKPPFLTQLHSCF 407
F V LA T E A+K++ K + D+V + + E R + L+ P + +L+
Sbjct: 6 FAVVKLARHVFTGEKVAVKVIDKT---KLDEVSRSHLFQEVRCMKLVQHPN-VVRLYEVI 173
Query: 408 QTVDRLYFVMEYVNGGDLM-YHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKL 466
T +LY ++E +GGD+ Y ++ G +E A Y +I + + HK +++RDLK
Sbjct: 174 DTQTKLYLILELGDGGDMYDYIMRHSGGLEEKLAKRYFRQIVEAISYCHKLHVVHRDLKP 353
Query: 467 DNVM-LDSEGHIKIADFG 483
+NV+ + G +K+ DFG
Sbjct: 354 ENVVFFEKPGLVKLTDFG 407
>01718
Length = 959
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Frame = +3
Query: 345 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 404
+G G F +V + T ++ A+K+ + + E ++L L L +
Sbjct: 171 IGAGFFSEVFKVTHRITGQVMALKM-----NTMTSNRHNMLREVQLLNRLQHANILRFMG 335
Query: 405 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISIGLFFLHKRGIIYRD 463
C +L+ + EY+ G+L +++ + Q + ++ GL +LH I+RD
Sbjct: 336 VCVHE-GQLHALTEYIPSGNLEQLLEKKDEELPWTQRIQLTLGLARGLDYLHSTRFIHRD 512
Query: 464 LKLDNVMLDSEG----HIKIADFGMCKEHMMDGVTTRTF--CGTPDYIAPEIIAYQPYGK 517
L N+++ E H IADFG+ + + D + G+P ++APE++ Y +
Sbjct: 513 LTSKNILIRREDNHGYHAVIADFGLATK-IPDPLDKEKLPTVGSPYWMAPEVLNGHFYNE 689
Query: 518 SVDWWAYGVLLYEMLAGQP 536
D ++ G+++ E+ A P
Sbjct: 690 RADLFSVGIIMCEITARIP 746
>07291
Length = 833
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Frame = +1
Query: 439 QAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTF 498
Q + + +I+ G+ +L + +++R+L N ++ +G ++++D+G+ T
Sbjct: 52 QLLDFGRQIADGMAYLQEVKVVHRNLAARNCIVTEDGRLQLSDYGVTGSLFPQSYYTADD 231
Query: 499 CGTPD---YIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQSIME-H 553
D ++APE I + D WA+GV+L+E+L G P+ + L + E H
Sbjct: 232 SPARDLVKWMAPETIDNFHFSSKSDVWAFGVVLWELLTRGITPYPDVENSSLLPYLKEGH 411
Query: 554 NVSYPKSLSKEAVSICKGLMTKHPAKR 580
+ PK + + + P +R
Sbjct: 412 RMKKPKQSPEPVYEMMTACWNESPEQR 492
>19301
Length = 712
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Frame = +2
Query: 336 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 395
+TD +L G G+ G V L K E A+K ++ I++ D+ R L L+
Sbjct: 311 ITDLEWL---GSGAQGAVFLG--KLCAEEVAVKKVRD---IKETDI-------RNLRKLN 445
Query: 396 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF-YAAEISIGLFFL 454
P ++ C Q +MEY G L Y + + GK P V ++ +I+ G+ +L
Sbjct: 446 HPNIISFKGVCTQA-PCYCIIMEYCPYGQL-YEVLRDGKEIPPALVLDWSKQIASGMNYL 619
Query: 455 HKRGIIYRDLKLDNVMLDSEGHIKIADFG 483
H II+RDLK NV++ +KI+DFG
Sbjct: 620 HSHKIIHRDLKSPNVLVAKNDVVKISDFG 706
>19361
Length = 685
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Frame = -1
Query: 89 ADKGPDTDDPRSK---------HKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNV 139
+ P+ D+P H FK+ + +C+ C + ++GLI QG+KC C +
Sbjct: 382 VNSTPEEDEPEQSIDWTQYEKPHVFKVQNFNGLNWCELCANFMWGLIAQGVKCQDCGVQT 203
Query: 140 HKQCVINVPSLCGMDHTEKRGRIY 163
HK+C +P+ C M + + R+Y
Sbjct: 202 HKKCSERMPNEC-MPNMKYVKRLY 134
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -1
Query: 35 KDHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSC 86
K H F + F +C C +F+WG QG +CQ C HK+C E + C
Sbjct: 322 KPHVFKVQNFNGLNWCELCANFMWGLIAQGVKCQDCGVQTHKKCSERMPNEC 167
>11780
Length = 1713
Score = 47.4 bits (111), Expect(2) = 2e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = +3
Query: 334 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 393
+ D +GKG FG V +G + AIK LK +D + + E V+
Sbjct: 588 IAXQDLEIGEAIGKGDFGDVYKGMYRG--QPVAIKQLKD----KDRGEQSFLQEASVMTS 749
Query: 394 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGL 451
L + + + ++ V E++ G+L+ +++ G+ + + +A + +
Sbjct: 750 LRHDNLVRLIGVVLG--ETIFLVTEFMGKGNLVEYLRSRGRSVITKKDQINFATDTCAAM 923
Query: 452 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 486
+L + +++RDL NV++ +G K++DFG+ K
Sbjct: 924 EYLESKRLVHRDLAARNVLVHDDGKAKVSDFGLAK 1028
Score = 23.1 bits (48), Expect(2) = 2e-06, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 520 DWWAYGVLLYEMLA-GQPPFDGEDEDELFQSIME-HNVSYPKSLSKEAVSICKGLMTKHP 577
D W++G+LL+E+ + G+ P+ ++ + + + P+ E SI K P
Sbjct: 1120 DMWSFGILLWEIYSFGRVPYPRIPLTDVVMHVERGYRMEAPEGCPPEIYSIMKQAWELDP 1299
Query: 578 AKR 580
+R
Sbjct: 1300 NER 1308
>30040
Length = 652
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = -3
Query: 171 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFK 230
E+L V + AK+L + +DP+V++ L+ + K ++KT R+++NP WNE+ F
Sbjct: 617 ERLTVVLMKAKDLKMSTSHPSADPFVRVSLLVEGKKVKRKKTSVRRASINPVWNEALAFN 438
Query: 231 LKPSD--KDRRLSVEIWDWDRTTRNDFMGSLSFG 262
+ P++ L V + D D D +G+ G
Sbjct: 437 V-PAEVLPKVTLEVSVLDHDLIGHGDVLGTCVLG 339
>20640
Length = 1492
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = +1
Query: 457 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-HMMDGVTTRTFCGTPDYIAP-EIIAYQP 514
RG ++RDL N ++ + +KI+DFG+ + H +D P P E I Y
Sbjct: 1 RGYVHRDLATRNCLVGHDLVVKISDFGLARSVHSVDYYRGSEHDAIPIRWMPLEAILYNK 180
Query: 515 YGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQSIMEHNV-SYPKSLSKEAVSICKGL 572
+ D W++GV+L+E+ A P+ G +E+ + + E V + P+ + K
Sbjct: 181 FSTQSDVWSFGVVLWEIFAFALQPYYGLTHEEVVRFVKEGKVLACPERTPPPMYELMKQC 360
Query: 573 MTKHPAKR 580
+ PA R
Sbjct: 361 WHRRPATR 384
>16708
Length = 1397
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Frame = -1
Query: 341 FLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 400
L VLGKG FGKV A T E A LK ++ ++ E L ++ +L
Sbjct: 1391 ILQVLGKGVFGKVYEARLLSTHEKAA---LKTSILCHH-----SLDEVEALGRIEGGFYL 1236
Query: 401 TQLHSCFQTV---DRLYFVMEYVNGGDLM-----YHIQQVG-KFKEPQAVF-YAAEISIG 450
Q+ + T ++ ++ + G L Y +++ ++ P V A +
Sbjct: 1235 AQMFGAWVTCLPFPKMNILLHFYEMGPLCNVYAHYKNKEMPIRWSNPAMVCCIAGQXVCA 1056
Query: 451 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRT 497
L +H+ G+++ D+K DNV++D+ G+ K+ D+G+ + + + T T
Sbjct: 1055 LEHIHELGVVHMDVKADNVLVDAHGNCKLTDYGIAQLYKVYPAPTET 915
>22804
Length = 967
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -3
Query: 102 HKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCG 152
H+F+ +TY +PT+CD C LL+G G C C N H +C VP C
Sbjct: 830 HRFEKYTYTTPTYCDFCQQLLWGFSKTGTHCVDCGYNCHDKCQPLVPKTCS 678
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 37 HKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSC 86
H+F + PT+C C +WGF K G C C + H +C V +C
Sbjct: 830 HRFEKYTYTTPTYCDFCQQLLWGFSKTGTHCVDCGYNCHDKCQPLVPKTC 681
>30743
Length = 569
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 106 IHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCV 144
+HT+ P CD CG LL G+ QG C M VHK+C+
Sbjct: 338 MHTFEKPKECDVCGKLLRGIFFQGYLCQDNQMAVHKECI 454
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 39 FIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRC 78
+I F++P C C + G QG+ CQ VHK C
Sbjct: 332 YIMHTFEKPKECDVCGKLLRGIFFQGYLCQDNQMAVHKEC 451
>20152
Length = 445
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 507 PEIIAYQPY-GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEA 565
PEI+ Y +VD W+ GV+LY ++ G+ PF ++ E IM+ P +S +
Sbjct: 1 PEILLGDSYDAPAVDVWSLGVILYMLVVGEAPFQEANDSETLTMIMDCRYQIPPHISHKC 180
Query: 566 VSICKGLMTKHPAKR 580
+ + ++ + P R
Sbjct: 181 QDLIEKMLQREPVDR 225
>27274
Length = 396
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Frame = -1
Query: 508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE-DEDELFQSIMEHNVSYPKSLSKEAV 566
E++ Q +G +VD W+ G+LL+E+L+G PF+ E ++ +++M Y + + +
Sbjct: 375 ELLRGQQHGPTVDMWSLGILLHELLSGHVPFEPERGSRQMARNMM---AVYAQIIRGSSR 205
Query: 567 SICKGL-MTKHPA---KRLGCGPEGERDVREHAF 596
+C GL ++ H A +RL + +R + AF
Sbjct: 204 DVCDGLALSTHGADFLRRLVQLEDTKRLTSQQAF 103
>18996
Length = 491
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +2
Query: 460 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG----VTTRTFCGTPDYIAPEIIAYQPY 515
I+RDL N+++D +KI+DFG+ + DG ++ R + +PE I +
Sbjct: 2 IHRDLAARNILVD-RSCVKISDFGLAQFANADGYYYGISQRDI--PIKWYSPEAIETCKF 172
Query: 516 GKSVDWWAYGVLLYEMLA 533
D W+YGV L+EM +
Sbjct: 173 SSYSDVWSYGVTLFEMFS 226
>02638
Length = 1490
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 500 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 542
GT ++APE++ + YG++ D W+ G ++ EM +PP++ D
Sbjct: 22 GTIAFMAPEVLRGESYGRACDVWSVGCVMIEMCTCRPPWNSHD 150
>07836
Length = 1478
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Frame = -1
Query: 412 RLYFVMEYVNGGDLM-YHIQQVGKFKEPQAVFYAAEISIGLFFLH--------KRGIIYR 462
+L+ + +Y G L Y + +V E A+ ++A GL LH K I +R
Sbjct: 1331 QLFLITDYHENGSLHDYLLSRVLDSSEMLALAHSA--ICGLAHLHIEIFGTRGKPAIAHR 1158
Query: 463 DLKLDNVMLDSEGHIKIADFGMCKEHMMDG----VTTRTFCGTPDYIAPEIIA------- 511
D+K N+++ G IAD G+ ++ + V GT Y+APE++
Sbjct: 1157 DIKSKNILVKKNGTCCIADLGLAVRYISESNEVDVAPNPRQGTKRYMAPEVLEMLLNVKN 978
Query: 512 YQPYGKSVDWWAYGVLLYEM 531
+ + K D +A+G++++E+
Sbjct: 977 FDAF-KQADMYAFGLVMWEI 921
>14477
Length = 493
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Frame = -1
Query: 345 LGKGSFGKVM-----LADRKGTEELYAIKILKKDVVIQDDDVECTMV-EKRVLALLDKPP 398
LG G+FG VM L DR E AIK+LK + D V+ ++ E V+ +D
Sbjct: 466 LGAGNFGSVMKGVCRLDDR---EIPVAIKVLKNADL--DPSVQSELIKEAEVMKKMDHMH 302
Query: 399 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG 458
+ + C + + V+E G L + + + ++S G+ +L
Sbjct: 301 IVRLIGLC--EGETMMLVLELAKLGPLNKFLPKNKHLPLWNILELMWQVSQGMEYLEANK 128
Query: 459 IIYRDLKLDNVMLDSEGHIKIADFGMCK 486
++RDL N++L E KI+DFGM K
Sbjct: 127 FVHRDLAARNILLCDEHFAKISDFGMSK 44
>08294
Length = 1849
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Frame = +2
Query: 414 YFVMEYVNGGDLMYHI------------QQVGKFKEPQAVFYAAEISIGLFFLHKRGIIY 461
+ + EY + GDL + +V Q + +++ G+ L +G+++
Sbjct: 935 FLITEYCDWGDLKQFLLATRNDNGRGRGTRVPALALSQKLGMGQQVAAGMEALSNQGLVH 1114
Query: 462 RDLKLDNVMLDSEGHIKIADFGMCKE-HMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVD 520
DL NV+L S +K+A + + + + ++ PE + D
Sbjct: 1115 GDLAARNVLLTSRMQLKVARPALSGDVYASEYYPLHQRLVPLRWLPPEGVLEDSATTCGD 1294
Query: 521 WWAYGVLLYEMLA-GQPPFDGEDEDELFQSIMEHNVSYPKSLSKEA-VSICKGLMTKHPA 578
WA+GV L+E+L P+ ++E+ +S+ + + A +S+ + + P+
Sbjct: 1295 VWAFGVFLWEVLQLADLPYRLMSDEEVLRSLQHSQAALDSPDAPPALLSLLQRCTAQQPS 1474
Query: 579 KR 580
+R
Sbjct: 1475 QR 1480
>03942
Length = 912
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 546 LFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPE--GERDVREHAFF-RRIDW 602
L+ ++ + +Y + ++ MTK+PAKRLGC E+ + HAFF ++IDW
Sbjct: 29 LYMQVLCNEYAYLVYMFSMSLFCIFQFMTKNPAKRLGCVTSQGAEKAIFIHAFFHQKIDW 208
Query: 603 EKL 605
E L
Sbjct: 209 EAL 217
>12442
Length = 468
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +3
Query: 572 LMTKHPAKRLGC--GPEGERDVREHAFF-RRIDWEKL 605
MTK+PAKRLGC E+ + HAFF ++IDWE L
Sbjct: 105 FMTKNPAKRLGCVTSQGAEKAIFIHAFFHQKIDWEAL 215
>36305
Length = 586
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = -1
Query: 190 GLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 249
G SDPY + + KTK I T+ P+WNE F F + D + L + I D D
Sbjct: 583 GKSDPYTVVTV-----GAQTFKTKVIDDTVEPRWNEVFEFVIDERDG-QILKLNISDKDP 422
Query: 250 TTRNDFMGSLSFGVSEL----MKMPASGW 274
++D +GS + +S + M M S W
Sbjct: 421 GNKDDPLGSTTMDISTIFEKAMWMSGSPW 335
>11404
Length = 563
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +1
Query: 344 VLGKGSFGKVMLADRKGTEELYAIKILK-KDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 402
++GKGSFG+V+ A E AIKI+K K + +E ++E D ++ +
Sbjct: 160 LIGKGSFGQVVKAYDHTDNEQVAIKIIKNKKPFLNQAQIEVKLLEMMNRHDTDNKYYIVR 339
Query: 403 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF---YAAEISIGLFFLH--KR 457
L F L V E ++ +Y + + F+ +A ++ L FL +
Sbjct: 340 LKRHFMFRSHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLATPEM 513
Query: 458 GIIYRDLKLDNVML 471
II+ DLK +N++L
Sbjct: 514 SIIHCDLKPENILL 555
>22005
Length = 873
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 433 GKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-HMMD 491
G ++ + +IS G+ +L ++ ++RDL V I+DFG+ + H +D
Sbjct: 427 GMLXTKDQLYISQQISAGMAYLAQKDYVHRDLATRTVXS-RTT*S*ISDFGLARSVHSVD 603
Query: 492 GVTTRTFCGTPDYIAP-EIIAYQPYGKSVDWWAYGVLLYEML 532
P P E I Y + D W++GV+L+E+L
Sbjct: 604 YYRGSEQDAIPIRWMPLEAILYSKFSTQSDVWSFGVVLWEIL 729
>31120
Length = 439
Score = 36.6 bits (83), Expect = 0.030, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 508 EIIAYQPYG-KSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSL----S 562
E++ PY K D W+ GV+L+ ML G+ PFD + ++L + S+ + L S
Sbjct: 1 EVVCGVPYDPKMADAWSLGVILFIMLNGKMPFDDSNLNKLLEDQRSKKYSFRRKLQDLVS 180
Query: 563 KEAVSICKGLMTKHPAKR 580
A S L+ + A R
Sbjct: 181 PNARSTVSVLLEPNSAMR 234
>26304
Length = 1290
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Frame = +3
Query: 193 DPYVKLKLIPD------PKNESKQKTKTIRSTLNPQW-NESFTFKLKPSDKDRRLSVEIW 245
DPYVKL ++P P + + ++ ST NP W NE+FT + +D + +EI
Sbjct: 906 DPYVKLTVVPSKSYPEKPHHHRELRSSVCPSTTNPVWDNETFTLEAYVTD---LVELEIK 1076
Query: 246 D---WDRTTRNDFMGSLSFGVSELM 267
D R T + F+G + V +M
Sbjct: 1077DKFSKSRPTMSRFLGKVVIAVQRIM 1151
>13896
Length = 827
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 176 TVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNE 225
TV A+NLI +G +D YV ++L + K +T TIR+ NP+W E
Sbjct: 167 TVLRARNLISKGKSGNNDVYVTIQL-----GKEKYQTSTIRNAHNPEWFE 301
>17253
Length = 483
Score = 35.0 bits (79), Expect = 0.093, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Frame = -1
Query: 387 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF---- 442
E ++ L + P + C D +ME+ GDL+ ++ K + + VF
Sbjct: 399 ELSIMRKLPRHPNVVSFMGCCTMSDPALILMEFCCHGDLLSFLR---KRRPDRTVFLTST 229
Query: 443 -----------YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 486
+A ++ G+ + I++RD+ NV++ K++DFG+ +
Sbjct: 228 ANDLTARDFFSFALHVARGMAHVANNKIVHRDVAARNVLISERNVCKVSDFGLSR 64
>13155
Length = 663
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 24/134 (17%)
Frame = -2
Query: 168 VTDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDP-KNESKQKTKTIRSTLNPQWNES 226
++ ++ V V + +L + NG +PY + L+ KN ++T + T+ PQ++E
Sbjct: 419 ISSHRMTVRVTECSDLRII--NGACNPYAVVTLLWGKYKNREVRRTAVRKKTICPQFDEV 246
Query: 227 FTFKL--KPSDKDR-----------RLSVEIW-DWDRTTR--------NDFMGSLSFGVS 264
F+F L + ++DR LSV W D R +R F+G + +
Sbjct: 245 FSFDLNNRGQNQDRNNYSFDDVYEGELSVSXWHDDSRVSREVLGNMFPGSFLGEVKIALR 66
Query: 265 EL-MKMPASGWYKL 277
+L + + WY L
Sbjct: 65 DLDLATAHTAWYCL 24
>29360
Length = 363
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = +3
Query: 358 RKGTEELYAIKILKKD-VVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFV 416
+KGT E+ AIKILK + +E +++++ D F+ CFQ + V
Sbjct: 15 KKGTSEIVAIKILKNHPSYARQGQIEVSILQRLSQESADDYNFVRAF-ECFQHKNHTCLV 191
Query: 417 MEYVNGGDLMYHIQQVGKFKEPQAVFY----AAEISIGLFFLHKRGIIYRDLKLDNVML 471
E + +Y + KF +P + Y ++ L L + G+I+ DLK +N+ML
Sbjct: 192 FEMLEQN--LYDFLKQNKF-QPLPLKYIRPITQQVLTALRKLKQLGLIHADLKPENIML 359
>18401
Length = 463
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 497 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV- 555
T T Y APE+I + D W+ G +++E+ G F D E ++ME +
Sbjct: 455 TIVSTRHYRAPEVILELGWSHPCDVWSVGCIMFELYTGYTLFQTHDNKEHL-AMMERILG 279
Query: 556 SYPKSLSKEA 565
S P ++K+
Sbjct: 278 SLPYRMAKKT 249
>23319
Length = 2235
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 507 PEIIAYQPYGKSVDWWAYGVLLYEML-AGQPPFDGEDEDELFQSIME 552
P++ + Y S+D W+ G + E+ AG+P F G D+D+ + I +
Sbjct: 3 PDVYXAKMYSTSIDMWSAGCIFAELANAGRPLFPGNDDDDQLKRIFK 143
>02913
Length = 855
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 626 FDKFFTRGQPVLTPPDQLVIANIDQSDFEGFSYVNPQFVHPI 667
FD FTR PV +P D ++ +I+Q F+GF+Y+ P + +
Sbjct: 18 FDTKFTRQTPVDSPDDTILSDSINQV-FKGFTYIAPSVLEEV 140
>17516
Length = 453
Score = 32.7 bits (73), Expect = 0.45, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 497 TFCGTPDYIAPEIIAYQ-PYGKSVDWWAYGVLLYEMLAGQPPFD 539
T GTP Y+APE++ + Y D ++ ++L+E+ GQ D
Sbjct: 442 TLAGTPVYMAPEVLLQKGQYDMKADVYSLAIILWELWYGQDAAD 311
>17932
Length = 597
Score = 32.7 bits (73), Expect = 0.50, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 521 WWAYGVLLYEMLAGQPPFDGEDEDEL--FQSIMEHNVSYPKSLSKEAVSICKGL 572
WW+ GV YEML G PF +D + + +IM + + S S++ V GL
Sbjct: 596 WWSLGVCAYEMLFGCTPFTDDDGSMVATYNNIMNYKTN-SSSPSQQRVQRGAGL 438
Score = 32.3 bits (72), Expect = 0.61, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = -3
Query: 549 SIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENR 608
+I + V S+SKEA + L++ + RLG PE +++H FF+ +DW + N
Sbjct: 496 TIRQTQVPPHSSVSKEARDLISQLLSDGKS-RLGW-PE----LQQHPFFKTVDWANIRN- 338
Query: 609 EIQPPFKPKV 618
PP+ P +
Sbjct: 337 -AMPPYVPSI 311
>01494
Length = 2122
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 173 LHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKT-IRSTLNPQWNESFTFK- 230
L +T+ A++L+ G++ P+V++++ + K KT T + + LNP WNE+ F
Sbjct: 1165 LTLTIVGARHLVK-SGRGIASPFVEIEVTGXECDNQKFKTGTRVDNGLNPVWNENCVFDV 1341
Query: 231 LKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGV 263
L P R +V D D +F+G F V
Sbjct: 1342 LCPEMALLRFAV--MDEDIFGDPNFLGQAXFPV 1434
>02841
Length = 1442
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1
Query: 636 VLTPPDQLVIANIDQSDFEGFSYVNPQFVHPILQ 669
+L P + +A ID +DF GF++ +P FV P+ Q
Sbjct: 740 ILAPFNXTTVAFIDVADFVGFAFSSPVFV-PVFQ 642
>26009
Length = 886
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 324 RKQPSNNLDRVKLTD-FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKK 372
R S+NL + L + ++ LG+G++GKV+LA + T A+K+L K
Sbjct: 374 RNSTSDNLLTLSLREHYDVCKELGRGTYGKVVLARCRHTGTQVALKLLPK 523
>26052
Length = 562
Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 341 FLMVLGKGSFGKVMLADRKGTEELYAIK 368
F +LG GSFGKVM K T E A+K
Sbjct: 379 FXKLLGVGSFGKVMALQHKDTGETLAVK 296
>13305
Length = 549
Score = 30.8 bits (68), Expect = 2.0, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 504 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELF 547
++A E + Y D W++GV+L+E+ G P+ D +LF
Sbjct: 23 WMAVESLFNNTYTTQSDVWSFGVVLWEIFTLGGTPYSSTDTQQLF 157
>16300
Length = 766
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Frame = -2
Query: 90 DKGPDTDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPS 149
++G +D S H + GSPTFC GSL + + CD ++ V S
Sbjct: 432 NQGKVIEDFISDHSLCLLNTGSPTFCASSGSLTH------VDLSICDPSLFLDLEWQVHS 271
Query: 150 -LCGMDH----------TEKRGRIYLKAEVTDEKLH 174
LCG DH TE+ R + K + L+
Sbjct: 270 DLCGSDHFPILTSFKKKTEESCREFWKFRAANWSLY 163
>18481
Length = 437
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = -1
Query: 451 LFFLHKRGIIYRDLKLDNVMLDSEGH---IKIADFGMCKEH 488
L F+H++ I+RDLK DN ++ H + I DFG+ K +
Sbjct: 158 LEFIHQKCFIHRDLKPDNFLMGLGRHCHRLYIIDFGLSKRY 36
>17357
Length = 482
Score = 30.0 bits (66), Expect = 3.2, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 246 DWDRTTRNDFMGSLSFGVSELMKMPASGWYKLLN 279
DWDR T+N+ +G L GV + A+ W +++N
Sbjct: 2 DWDRMTKNEVVGRLEIGV-KCGGQEANHWNEVIN 100
>33692
Length = 426
Score = 29.6 bits (65), Expect = 3.8, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -1
Query: 50 CSHCTDFIWGFGKQGFQCQVCC-FVVHKRCH 79
C + WG QGFQC CC +VV H
Sbjct: 228 CRNLLSSFWGKVSQGFQCLNCCWYVVRNTLH 136
>36388
Length = 834
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Frame = +2
Query: 58 WGFGKQGFQCQVCCFVVHK--RCH--EFVTF 84
WG+G F+C++CCF H CH F TF
Sbjct: 257 WGWGDHNFKCRICCFQFHWVLSCHLXXFQTF 349
>17637
Length = 447
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 504 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQSIME-HNVSYPKSL 561
+++ E + Y + D W++GVL++EM G+ P+ D E+ + + + ++ P +
Sbjct: 115 WLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEIDPYEMEHYLKDGYRLAQPFNC 294
Query: 562 SKEAVSICKGLMTKHPAKR 580
E +I PA+R
Sbjct: 295 PDELFTIMAYCWASMPAER 351
>18567
Length = 437
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Frame = -3
Query: 84 FSCPGADKGPDTDDPRSKHKFKIHTYGSPTFCDHCGSLL--------YGLIHQGMKCDTC 135
F C +KG + KHKF IHT P CD C + LIH KC C
Sbjct: 198 FVCDVCEKGFTLRENLIKHKF-IHTGQKPFVCDVCHKSFTQKYNLDQHKLIHSDQKCYVC 22
Query: 136 DM 137
D+
Sbjct: 21 DV 16
>00638
Length = 1595
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 415 FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLK 465
+ E+VN D Q F + FY E+ L F H GI++RD+K
Sbjct: 356 LIFEHVNNTDFK---QLYQTFTDYDIRFYLYELMKALDFCHSMGIMHRDVK 499
>32359
Length = 928
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 332 DRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKD 373
DR + + V+G GSFG V A T EL AIK + +D
Sbjct: 445 DRPQEVSYTDAKVIGNGSFGVVYQAKLVDTSELVAIKKVLQD 320
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31542413|ref|NP_035909.2| coronin, actin binding
protein 1C [Mus musculus]
(474 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
16105 337 4e-93
30679 199 4e-60
03387 67 2e-11
01805 58 1e-08
01768 57 1e-08
19498 56 2e-08
19949 52 5e-07
12140 48 1e-05
30108 42 4e-04
02960 42 5e-04
31474 42 6e-04
12841 41 8e-04
10264 40 0.001
29912 40 0.002
00825 40 0.002
01598 40 0.002
27475 39 0.004
37180 38 0.007
12574 38 0.009
37142 38 0.010
31384 38 0.010
21921 38 0.011
27465 37 0.012
04358 37 0.022
06576 37 0.023
28289 36 0.036
30256 36 0.036
14516 35 0.061
17602 35 0.068
13335 35 0.096
03156 34 0.12
02147 34 0.12
01327 34 0.12
18981 34 0.12
15745 33 0.20
04088 32 0.38
05642 32 0.44
31864 32 0.45
03395 32 0.57
19863 30 1.5
14500 30 1.9
15118 29 4.4
27681 29 4.7
26107 29 5.0
25880 28 6.9
05303 28 7.1
38362 28 7.2
>16105
Length = 960
Score = 337 bits (865), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 155/269 (57%), Positives = 203/269 (75%)
Frame = -2
Query: 5 VRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLH 64
+RQSKFRHVFG+ K DQCYD IR++R +W+S++CAVNP+FVA++ EA+GGGAFLVLPL
Sbjct: 800 MRQSKFRHVFGKPEKRDQCYDGIRITRTSWESTYCAVNPKFVAVMTEAAGGGAFLVLPLS 621
Query: 65 KTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVV 124
+ GR+ P V GH G VLDI WCPHND VIAS S+DCTV VWQIP++GL +LT+PVV
Sbjct: 620 RVGRVPVDNPLVAGHKGAVLDIQWCPHNDNVIASASDDCTVKVWQIPDSGLVTNLTDPVV 441
Query: 125 ILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSR 184
L GH KR ++ WHP+A+NVL+SAG DN I+ WNVGTGE ++ +D DMIY +S++
Sbjct: 440 DLVGHQKRCCLIVWHPSAQNVLVSAGADNKILFWNVGTGEPMLEVD--VPDMIYCMSFNF 267
Query: 185 NGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQ 244
NGS + KDKK+R+ID ++ E K H+GA+P +A +L DG VFTTGFSRMSERQ
Sbjct: 266 NGSRLVCTCKDKKLRIIDSHSGAVLKEG-KCHDGAKPAQACYLKDGKVFTTGFSRMSERQ 90
Query: 245 LALWNPKNMQEPIALHEMDTSNGVLLPFY 273
A+W+ ++ E + L E+D+SNGV+ FY
Sbjct: 89 YAIWDENDLSESMTLEEIDSSNGVMFIFY 3
>30679
Length = 1025
Score = 199 bits (505), Expect(3) = 4e-60, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 130/192 (67%)
Frame = +1
Query: 144 NVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRVIDP 203
N+LLSAG D ++WNV E +N+ D H+D I+++SW+R GS+ T SKDKK+R IDP
Sbjct: 1 NILLSAGFDYKCVVWNVEQAEP-VNIVDCHTDTIFSMSWNRXGSMFATTSKDKKLRTIDP 177
Query: 204 RKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLALWNPKNMQEPIALHEMD 263
R + AE + H+G + + +F + + TTGF++M R+L+LW+ + + I ++D
Sbjct: 178 RTTTVAAESQ-CHKGPKASKVVFADNVKLTTTGFAQMGSRELSLWDLRKSKTAIHTVDLD 354
Query: 264 TSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYLNTFSSKEPQRGMGYMPKR 323
+S GV+LP+YD DT +I+L GKGD +IRYFE++D H+LN + S PQRG+G MPKR
Sbjct: 355 SSCGVMLPYYDYDTRVIFLAGKGDGNIRYFEVSDTDSCFHFLNAYQSPSPQRGLGMMPKR 534
Query: 324 GLDVNKCEIARF 335
G D +CEI RF
Sbjct: 535 GCDTKRCEIMRF 570
Score = 39.3 bits (90), Expect(3) = 4e-60, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3
Query: 362 YPDTAGPEAALEAEEWFEGKNADPILISLKHGYIPGKNRDLKVVKKNILDSKPAANKKSE 421
YP TA +L A+EW G+N +PIL+S+ G + V I SK +
Sbjct: 654 YPPTASTIPSLRADEWISGQNREPILVSMVDGTV--------VSSPQITTSKAVQKQDGT 809
Query: 422 LSCAP 426
L AP
Sbjct: 810 LQSAP 824
Score = 32.7 bits (73), Expect(3) = 4e-60, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 336 FKLHERK--CEPIIMTVPRKSDLFQDDL 361
+LH K EPI M VPRKSD FQ+D+
Sbjct: 569 LQLHAAKNLVEPISMIVPRKSDAFQEDV 652
>03387
Length = 1891
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 106/234 (45%), Gaps = 4/234 (1%)
Frame = +1
Query: 22 QCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLHKT---GRIDKSYPTVCG 78
+C ++R+ + + NP ++ AS + ++ T R+ ++ G
Sbjct: 328 ECIPELRLKGHQKEGYGLSWNPNLNGHLLSASDDHTICLWDINSTQRESRVVDAHTIFTG 507
Query: 79 HTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAW 138
HT V D+ W ++ + S ++D +M+W N + ++P +++ H+ V +++
Sbjct: 508 HTSVVEDVAWHLLHESLFGSVADDQKLMIWDTRSN----TTSKPSHVVDAHTAEVNCLSF 675
Query: 139 HPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWS-RNGSLICTASKDKK 197
+P + +L + D + +W++ + ++ + H D I+ V WS N +++ ++ D++
Sbjct: 676 NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 855
Query: 198 VRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLALWNPK 251
+ V D K E A +G P +F+ G+ T S S WNP
Sbjct: 856 LHVWDLSKIGEEQLPEDAEDG--PPELLFIHGGH--TAKISDFS------WNPN 987
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +1
Query: 79 HTGPVLDIDWCPHNDQVIASGSEDCTVMVW--------QIPENGLTLSLTEPVVILEGHS 130
H + + W PHN+ ++AS D + VW Q+PE+ E + I GH+
Sbjct: 778 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQLPEDAED-GPPELLFIHGGHT 954
Query: 131 KRVGIVAWHPTARNVLLSAGCDNAIIIWNVG 161
++ +W+P ++ S DN + +W +
Sbjct: 955 AKISDFSWNPNEPWIVCSVSEDNIMQVWQMA 1047
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPEN 113
GHT + D W P+ ++ S SED + VWQ+ EN
Sbjct: 946 GHTAKISDFSWNPNEPWIVCSVSEDNIMQVWQMAEN 1053
>01805
Length = 2124
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%)
Frame = -1
Query: 75 TVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVG 134
+V GHT VLD+ W + V+AS S D TV +W + E + ++ T+ HS+ V
Sbjct: 591 SVTGHTQAVLDLSWNRNARHVLASASADTTVALWDLSEGKMAMNFTQ-------HSREVQ 433
Query: 135 IVAWHPTARNVLLSAGCDNAIIIWNVGTGEA 165
WHP LL+ DN + + + + E
Sbjct: 432 CCNWHPQEEQTLLTGSFDNTVKVVDCRSAET 340
>01768
Length = 1424
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Frame = +3
Query: 55 GGAFLVLPLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENG 114
G ++ P +KS + HT V D+ W P+ V AS S D T+ +W +
Sbjct: 768 GAIYISQPSSSGWTTEKS--SYAAHTDSVEDVQWSPNEGNVFASCSVDRTLRIWNTQQKP 941
Query: 115 LTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVG-------TGEALI 167
S + + E HS+ + ++ W+P +++L S G D I IW++ + +A
Sbjct: 942 ---SKANVLTVPEAHSRDINVINWNPIEKHLLASGGDDGIIKIWDLRMFRNKPVSAQASF 1112
Query: 168 NLDDMHSDMIYNVSWS-RNGSLICTASKDKKVRVID 202
L HS + ++ W+ ++ S++ + +D ++ + D
Sbjct: 1113KL---HSQPVTSLEWNPQDSSVLAASGEDDQITIWD 1211
>19498
Length = 903
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Frame = -1
Query: 79 HTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPEN-GLTLSLTEPVVILE---------G 128
H G V + W N + +ASG +D +M+WQI G S V ILE G
Sbjct: 789 HLGCVNCVRW-SENGKFLASGGDDKLIMIWQISRGFGSGKSFGSNVTILEHWRSVATLRG 613
Query: 129 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSL 188
H+ V +AW P L S DN I++WN + + H+ M+ V+W G
Sbjct: 612 HAGDVLDLAWSPQDL-WLASCSVDNTIVVWNALKFSEQVAVIRGHAGMVKGVTWDPVGRY 436
Query: 189 ICTASKDKKVRV 200
+ + S DK +RV
Sbjct: 435 LASQSDDKTLRV 400
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%)
Frame = -1
Query: 71 KSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHS 130
+S T+ GH G VLD+ W P D +AS S D T++VW L +E V ++ GH+
Sbjct: 636 RSVATLRGHAGDVLDLAWSPQ-DLWLASCSVDNTIVVWN------ALKFSEQVAVIRGHA 478
Query: 131 KRVGIVAWHPTARNVLLSAGCDNAIIIW 158
V V W P R L S D + +W
Sbjct: 477 GMVKGVTWDPVGR-YLASQSDDKTLRVW 397
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -1
Query: 71 KSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPE-NGLTLSLTEPVVILEGH 129
KS CG T VL ++W P + V+++ + + QI E NG SL GH
Sbjct: 363 KSCFKECGGTTHVLRLNWSPDGNHVVSAHAMNNAXPTAQIIERNGWGTSLD-----FVGH 199
Query: 130 SKRVGIVAWHP 140
K + +V ++P
Sbjct: 198 RKAITVVRFNP 166
>19949
Length = 903
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%)
Frame = +2
Query: 83 VLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTA 142
V +D+ P+ ASGS DC V +W I G + +GH+ V + + P
Sbjct: 2 VKSLDFHPYG-AYTASGSMDCNVKLWDIRRKGC-------IYTYKGHTGCVCCLRFSPDG 157
Query: 143 RNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRVID 202
R + SA D + +W++ G+ L +L +H D + + + + L+ + S D+ V+ D
Sbjct: 158 R-WIASASEDGLVKLWDLTAGKLLTDL-KLHRDAVNTIEFHPHEFLLASGSADRTVKFWD 331
Query: 203 PRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLALWNPKNMQEPIAL 259
++++ E R + +F DG +G ++ W P + + +++
Sbjct: 332 LETFQLISTTEPEANSIRSI--LFHPDGVCLYSG--SKDTLKVYHWEPLELYDTVSV 490
>12140
Length = 727
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 96 IASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTA---RNVLLSAGCD 152
SG D V +W+ E G LEGHS V VAW P+ RNV+ S D
Sbjct: 269 FVSGGCDNLVKIWREDETGWVEDQK-----LEGHSDWVRDVAWAPSIGLPRNVIASCSQD 433
Query: 153 NAIIIW-NVGTGEALIN-LDDMHSDMIYNVSWSRNGSLICTASKDKKVRV 200
+IIW N G+ + + + SD++++VSWS G+++ + D KV +
Sbjct: 434 CRVIIWTNDGSSNQWTSRILNKFSDVVWHVSWSVTGNILAVSGGDNKVTL 583
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +2
Query: 78 GHTGPVLDIDWCPHND---QVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVG 134
GH+ V D+ W P VIAS S+DC V++W +G + T IL S V
Sbjct: 350 GHSDWVRDVAWAPSIGLPRNVIASCSQDCRVIIW--TNDGSSNQWTSR--ILNKFSDVVW 517
Query: 135 IVAWHPTARNVLLSAGCDNAIIIW 158
V+W T N+L +G DN + +W
Sbjct: 518 HVSWSVTG-NILAVSGGDNKVTLW 586
>30108
Length = 1032
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = +1
Query: 83 VLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGI--VAWHP 140
V + W P + V+A + V++W I L + V + HS I +AW P
Sbjct: 235 VAHLAWQPLSASVLAVACQS-AVLIWHIEPTSLAARPSSSSVQVLQHSGHCPITHLAWLP 411
Query: 141 TARNVLLSAG-CDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVR 199
+A N+LLSA D A++ W+VG GEA L + + ++ S +GS + A+ R
Sbjct: 412 SA-NILLSASPVDTAVMAWSVG-GEACTALRYLGGGGVSLLACSPDGSKVMAATPATLFR 585
Query: 200 VID 202
V D
Sbjct: 586 VWD 594
>02960
Length = 1577
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +2
Query: 122 PVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGE--ALINLDDMHSDMIYN 179
PV+ L GH++ V V W R ++++ D+++ +W++ T + +LI S + +
Sbjct: 935 PVLTLSGHAEAVSAVRWLDPHR--VVTSSWDHSLRLWDLHTAQQTSLIQ----GSKAVLD 1096
Query: 180 VSWSRNGSLICTASKDKKVRVIDPRKQE 207
V++S ++ T S D+ VR++DPR E
Sbjct: 1097 VAYSPLSHMLITGSADRHVRLVDPRCSE 1180
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +2
Query: 79 HTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAW 138
HTG V +DW P + + SGS D + +W TL + H R+ V W
Sbjct: 1211 HTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATL------YDMNWHEDRILAVDW 1372
Query: 139 HPTARNVLLSAGCDNAIIIWN-----VGTGEALIN 168
+ +LLS G DN + +++ +GT + LI+
Sbjct: 1373 --SIPELLLSGGVDNKLHVFSYSSAKLGTTD*LID 1471
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +2
Query: 129 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSL 188
H+ V V W PT ++ LS DN + +W+ + +A + + H D I V WS L
Sbjct: 1211 HTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHEDRILAVDWSIP-EL 1387
Query: 189 ICTASKDKKVRVI 201
+ + D K+ V
Sbjct: 1388 LLSGGVDNKLHVF 1426
>31474
Length = 403
Score = 42.0 bits (97), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 115 LTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALI---NLDD 171
+ ++ E V L H + VAW+PT +L S G D I IW G+ + L D
Sbjct: 350 MAMATLEEVCCLSAHDEHAWCVAWNPTG-TLLASCGSDKIIKIWG-KEGDNWVCKSTLTD 177
Query: 172 MHSDMIYNVSWSRNGSLICTASKDKKVRV 200
H+ + ++ WS G+ + +AS D V
Sbjct: 176 AHTRTVRSLGWSPCGNYLSSASFDATTAV 90
Score = 31.6 bits (70), Expect = 0.81, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = -3
Query: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 137
HT V + W P + ++S S D T VW E + LEGH V VA
Sbjct: 176 AHTRTVRSLGWSPCGN-YLSSASFDATTAVWSRKGGEF-----ECIATLEGHENEVKAVA 15
Query: 138 WHPT 141
W T
Sbjct: 14 WART 3
>12841
Length = 1364
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +1
Query: 75 TVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVG 134
T GHT PV I W P + S S D ++ +W T P++ +K V
Sbjct: 1033 TYSGHTAPVYHIRWSPFVSDIFLSCSADWSIRLWHQDR-------TTPILTFHSSTKTVH 1191
Query: 135 IVAWHPTARNVLLSAGCDNAIIIWNVG--TGEALINLDDMHSDMIYNVSWSRN 185
V W P + V + A+ +W++ T +A+I + + +V++ ++
Sbjct: 1192 DVCWSPRSSTVFACVH-EGAVEVWDLAQSTLDAVITITPTSGAKLTSVTFGKH 1347
>10264
Length = 416
Score = 40.4 bits (93), Expect = 0.001, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 40/88 (45%)
Frame = -1
Query: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 137
GH+ V D+ W PH+D + S D VW + + G L+ +GH R+
Sbjct: 251 GHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDV-QKGTALAQ------FKGHMGRLLTCQ 93
Query: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEA 165
+ +++++ G D ++ +W V A
Sbjct: 92 FSGLDPDLVMTGGSDASVHVWRVSQQAA 9
Score = 37.7 bits (86), Expect = 0.011, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -1
Query: 126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRN 185
L GHS+RV ++W P L+S G D +W+V G AL ++ +
Sbjct: 257 LSGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSGLD 78
Query: 186 GSLICTASKDKKVRV 200
L+ T D V V
Sbjct: 77 PDLVMTGGSDASVHV 33
>29912
Length = 510
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%)
Frame = +3
Query: 4 VVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPL 63
V +Q K R + G A RV ++W+S + R SG +
Sbjct: 96 VTQQKKLRTMAGHAA---------RVGSLSWNSFIVSSGSR--------SGN-----IHH 209
Query: 64 HKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPV 123
H D T+ GH+ V + W P + + +ASG+ D + VW P + T+P+
Sbjct: 210 HDVRVADHHVGTLSGHSQEVCGLRWSP-DGKYLASGANDNLLCVW--PAQVTGGNSTQPL 380
Query: 124 VILEGHSKRVGIVAWHPTARNVLLSAGCDNAII 156
H V +AW P + L S G D I+
Sbjct: 381 HTFSQHQAAVKALAWCPWQPSXLASGGGDVLIV 479
>00825
Length = 1821
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%)
Frame = -2
Query: 86 IDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTARNV 145
+ W P I S +ED + + + + L+ P+ + H+ V V + PT R
Sbjct: 1343 LSWNPMEAFTITSANEDGNLYTFDMRK------LSMPLNMHRDHTAAVMDVDYCPTGRE- 1185
Query: 146 LLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRV 200
+SAG D I I+ V G + + +V WSR+ I +AS + +RV
Sbjct: 1184 FVSAGYDKVIRIFPVDKGHSREVYHTKRMQRVGSVVWSRDSKYIFSASDEMNIRV 1020
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%)
Frame = -2
Query: 79 HTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAW 138
HT V+D+D+CP + +++G D + ++ + + G + + + +RVG V W
Sbjct: 1232 HTAAVMDVDYCPTGREFVSAGY-DKVIRIFPV-DKGHSREVYHTKRM-----QRVGSVVW 1074
Query: 139 HPTARNVLLSAGCDNAIIIWNVGTGEALINL 169
++ + SA + I +W EAL L
Sbjct: 1073 SRDSK-YIFSASDEMNIRVWKAVAWEALGKL 984
>01598
Length = 1545
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%)
Frame = +1
Query: 65 KTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVV 124
+T I S + GH+ V D+ W PH+D + S D VW + + G L+
Sbjct: 1255 ETSLILTSLRELSGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDV-QKGTALAQ----- 1416
Query: 125 ILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNV 160
+GH R+ + +++++ G D ++ +W V
Sbjct: 1417 -FKGHMGRLLTCQFSGLDPDLVMTGGSDASVHVWRV 1521
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +1
Query: 126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRN 185
L GHS+RV ++W P L+S G D +W+V G AL ++ +
Sbjct: 1288 LSGHSQRVTDMSWSPHHDARLVSVGYDAEAFVWDVQKGTALAQFKGHMGRLLTCQFSGLD 1467
Query: 186 GSLICTASKDKKVRVIDPRKQ 206
L+ T D V V +Q
Sbjct: 1468 PDLVMTGGSDASVHVWRVSQQ 1530
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 43/111 (38%)
Frame = +1
Query: 72 SYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSK 131
S T+ GH V + P + +A G D + W + +T + +G
Sbjct: 490 SMATLGGH---VYCVRTSPIDPGRVAVGVGDSMIRTWNMSNKTNPYDVT---TLWQGIKS 651
Query: 132 RVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSW 182
+V VAWHPT L D I +++V + + + H Y V W
Sbjct: 652 KVTAVAWHPTKEGWLGFGTDDGRIGVFDVLSHKMPTLSNTFHHRTAYVVCW 804
>27475
Length = 369
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +2
Query: 79 HTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAW 138
HTG V +DW P + + SGS D + +W T S + + H R+ V W
Sbjct: 65 HTGWVTGVDWSPTREHLFLSGSYDNVLKLWD------TRSPKATLYDMNWHEDRILAVDW 226
Query: 139 HPTARNVLLSAGCDNAIIIWNVGTGE 164
+ +LLS G DN + +++ + +
Sbjct: 227 --SIPELLLSGGVDNKLHVFSYSSAK 298
Score = 37.7 bits (86), Expect = 0.011, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 129 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSL 188
H+ V V W PT ++ LS DN + +W+ + +A + + H D I V WS L
Sbjct: 65 HTGWVTGVDWSPTREHLFLSGSYDNVLKLWDTRSPKATLYDMNWHEDRILAVDWSIP-EL 241
Query: 189 ICTASKDKKVRV 200
+ + D K+ V
Sbjct: 242 LLSGGVDNKLHV 277
>37180
Length = 681
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 188 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247
L+ T+SKD R+ D R ++ + H +P+ + A G+ +G +R + +
Sbjct: 61 LVVTSSKDMTFRLWDFRDSALLVNVFQGH--TQPVTSAVFASGDKVVSG---SDDRTVRV 225
Query: 248 WNPKNMQEPIALHEMDTSNGVLLPF-YDP 275
W+ +NM+ PIA D++ + F Y P
Sbjct: 226 WDMRNMRSPIATIRTDSAVNRFV*FQYRP 312
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +1
Query: 125 ILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSR 184
+L GH + + V HPT R V+ S+ D +W+ L+N+ H+ + + ++
Sbjct: 4 VLNGHDQELSDVHAHPTQRLVVTSSK-DMTFRLWDFRDSALLVNVFQGHTQPVTSAVFA- 177
Query: 185 NGSLICTASKDKKVRVIDPRK 205
+G + + S D+ VRV D R
Sbjct: 178 SGDKVVSGSDDRTVRVWDMRN 240
>12574
Length = 521
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +3
Query: 126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRN 185
L GH+K + V + P + L S+ D I IW G+ + H + +V+WS +
Sbjct: 174 LAGHTKALSAVKFSPNG-DWLASSSADKLIKIWGAYDGKFEKTIAG-HKLGLSDVAWSSD 347
Query: 186 GSLICTASKDKKVRV 200
L+C+AS DK +++
Sbjct: 348 SKLLCSASDDKTLKI 392
>37142
Length = 327
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +2
Query: 48 IIIEASGGGAFLVLPLHKT--GRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTV 105
+I+ + G+ LV K G D S + HTG V +D+ P ++ASG+ + +
Sbjct: 2 VIVGGADNGSVLVYSAQKMIDGDADCSVLQLTKHTGAVKALDFNPFQTNLLASGASESEI 181
Query: 106 MVWQI--PENGLTLSL-TEPVVILEGHSKRVGIVAWHPTARNVLLS 148
+W + P+N +T ++P + V VAW+ +++L S
Sbjct: 182 YIWDLNKPDNPMTPGQKSQP-------PEEVSCVAWNRQVQHILAS 298
>31384
Length = 474
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 146 LLSAGCDNAIIIWNVG-TGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRVID 202
L+S DN + W V +G+ + H+ + +V WS +G+ + TAS DK +V D
Sbjct: 222 LISGSWDNKVSCWEVQQSGQTIPKAQQTHTGPVLDVDWSDDGTKVFTASCDKTAKVWD 49
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 79 HTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPEN 113
HTGPVLD+DW +V + S D T VW + N
Sbjct: 138 HTGPVLDVDWSDDGTKVF-TASCDKTAKVWDLNSN 37
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = -1
Query: 96 IASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAI 155
+ SGS D V W++ ++G T+ + + H+ V V W V +A CD
Sbjct: 222 LISGSWDNKVSCWEVQQSGQTIPKAQ-----QTHTGPVLDVDWSDDGTKV-FTASCDKTA 61
Query: 156 IIWNVGTGEAL 166
+W++ + + +
Sbjct: 60 KVWDLNSNQCM 28
>21921
Length = 1341
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -1
Query: 78 GHTGPVLDIDWCPH-NDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIV 136
GHTG V I CP Q + SGS+D T+ W++ +L V V
Sbjct: 489 GHTGIVRSI--CPDPTGQWLVSGSDDGTIRFWEVSSGRCMKTLQV--------GGCVTSV 340
Query: 137 AWHPTARNVLLSAGCDNAIIIWNVGTGEALI 167
AW+P +++A + +++ N G G+ L+
Sbjct: 339 AWNPNPSLCVVAATLNTTVLLINPGLGDKLV 247
>27465
Length = 658
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%)
Frame = -1
Query: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 137
H P+ ++ + I +GS D T +W E + LEGH V +A
Sbjct: 367 AHILPLTNVAFNKSGSSFI-TGSYDRTCKIWDTAS-------AEELHTLEGHRNVVYAIA 212
Query: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKK 197
++ + +++ D +W+ G+ L H+ I VS++ + +LI T S D
Sbjct: 211 FNNPFGDKVITGSFDKTCKLWSTADGKCYHTLRG-HTAEIVCVSFNPSSTLIATGSMDTT 35
Query: 198 VRVIDPRKQE 207
R+ D K +
Sbjct: 34 CRLWDVEKAQ 5
>04358
Length = 2430
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 87/211 (41%), Gaps = 6/211 (2%)
Frame = +1
Query: 115 LTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHS 174
++L TEP +L G+ A H + L++A N ++ A N H
Sbjct: 1264 VSLYKTEPHYVL-------GLAAQHTGGADSLVAAASSNFMVRLYSRCRLAQTNTLTGHD 1422
Query: 175 DMIYNVSW-SRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLA-DGN- 231
D+I ++ + + LI TAS D VR+ DPR V+++ + G + + L+ D N
Sbjct: 1423 DVISSIRFLHTDPGLIMTASHDHTVRIWDPRAS--VSKEVQRFSGEQNTKCSVLSCDVNI 1596
Query: 232 ---VFTTGFSRMSERQLALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDS 288
V G ++ L+ + + + +E + + + P + L G D
Sbjct: 1597 SDRVLCAGTEMSNDDAYLLFWDRRKDKLLGCYEDSHHDDITQVHFGPTSEKTLLTGSTDG 1776
Query: 289 SIRYFEITDESPYVHYLNTFSSKEPQRGMGY 319
+ F++ + ++T++++ G+
Sbjct: 1777 LVNVFDVMQTTEDDALMSTYNTEATVERAGW 1869
>06576
Length = 1547
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
Frame = -2
Query: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 137
GHT V + + P + + S +D T VW ++G E V+ V
Sbjct: 1090 GHTDFVNSVTFSPTEEDQVXSTGDDLTCRVW-TGKDGQDGRYGESVIFRLTAPGMA--VC 920
Query: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKK 197
WH L+ D I +++ + +++L S ++ + WS++ L+ A
Sbjct: 919 WHADEPLKLMVGQKDGIIRFFSLSNQQPIMSLSCGVSPLL-DCDWSKHNCLLVGAVAGAD 743
Query: 198 VRVIDPRKQEIVAEKEKAH-EGARPMRAIFLADGNVFTTGFSRMSERQLALWNPKNMQ 254
V D + +K +AH EGAR R + V T G +RQ+ ++N ++ Q
Sbjct: 742 WIVFDTSVSSMPLDKRQAHVEGARNFRWSRCHESLVATLG---RPQRQVKVFNTRHQQ 578
>28289
Length = 349
Score = 35.8 bits (81), Expect = 0.036, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -1
Query: 126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTG---EALINLDDMHSDMIYNVSW 182
LEGHS V +VAW+ + L ++ II+W + G E +IN + + ++ + W
Sbjct: 244 LEGHSGAVQVVAWNEHHQK-LTTSDQYGLIIVWMLYKGSWYEEMIN--NRNKSVVRGMKW 74
Query: 183 SRNGSLICTASKDKKVRV 200
+ +G IC +D V V
Sbjct: 73 TADGQKICIVYEDGAVIV 20
>30256
Length = 961
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%)
Frame = +3
Query: 96 IASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAI 155
+ SGS D T+ VW I E+G L+ +L GH V V + ++S D +
Sbjct: 201 VVSGSRDATLRVWDI-ESGHCLN------VLLGHMAAVRCVQYDGKR---VVSGAXDYTV 350
Query: 156 IIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRVIDPRKQEIV 209
+W+ T L L H++ +Y++ + +G + + S D +RV D R ++V
Sbjct: 351 RVWDPDTASCLHTLQG-HTNRVYSLQF--DGVYVVSGSLDTSIRVWDVRCGKLV 503
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Frame = +3
Query: 93 DQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCD 152
D ++ SG+ D TV VW + +L P H V + ++ + +++ D
Sbjct: 552 DNLLVSGNADSTVKVWDVHTGKCLQTLLGP----NKHRSAVTCLQFN---KKFVVTCSDD 710
Query: 153 NAIIIWNVGTGEALINLDDMHSDMIYNVSW---SRNGSLICT-----ASKDKKVRVID 202
+ +W++ TG+ + NL + S V W N ++C +++ K+ V+D
Sbjct: 711 GTVKLWDLNTGDFIRNLITLPSGGSGGVVWRLRCNNTKMVCAVGSRNGTEETKLLVLD 884
>14516
Length = 581
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 43/103 (41%)
Frame = -3
Query: 56 GAFLVLPLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGL 115
G F VL + G DK TG + H + I + S D TV Q+ E GL
Sbjct: 456 GKFEVLQSYDVGHKDKL-------TGVI-------HTEGAIYTSSNDKTV---QVLEPGL 328
Query: 116 TLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIW 158
P+ LE H V +A+ VL SAGCD + IW
Sbjct: 327 N---PRPITTLEKHQSGVAGIAYQ---NGVLASAGCDITVGIW 217
>17602
Length = 481
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +3
Query: 157 IWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRVID 202
IW+V TG+ L L HSD + V ++R+GSLI ++S D R+ D
Sbjct: 6 IWDVKTGKCLKTLP-AHSDPVTAVHFNRDGSLIVSSSYDGLCRIWD 140
>13335
Length = 863
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 80/209 (38%), Gaps = 56/209 (26%)
Frame = +1
Query: 96 IASGSEDCTVMVWQIPENGLTLSLT---EPVVIL----EGHSKRVG-----IVAW----- 138
+ SGS+D T+ +W++ L S + V+ L GH G + W
Sbjct: 106 LVSGSDDDTICMWEVATQKLVRSYVGHEDSVMALAYSPNGHYLVSGSPNGDLYVWDASFG 285
Query: 139 ---HPTAR----------------------------NVLLSAGC-DNAIIIWN----VGT 162
H T R N+LL+ G DN I +W VG+
Sbjct: 286 HCRHLTLRVDAHDLGVTCCEFSPTFGTACAENSSTCNLLLATGGKDNLIKLWTFSAQVGS 465
Query: 163 GEALINLDDM---HSDMIYNVSWSRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGA 219
E + D+ HSD++ ++S + +L+ + S DK VR+ D K + E H
Sbjct: 466 PEVTLQCRDILSGHSDLVMACAFSPSSALLASGSFDKSVRLWDSVKGVALFSIEACHSRF 645
Query: 220 RPMRAIFLADGNVFTTGFSRMSERQLALW 248
A F DG + +G +R + +W
Sbjct: 646 VTCCA-FSIDGTLLASG---SMDRIIKIW 720
>03156
Length = 1014
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Frame = +1
Query: 83 VLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTA 142
V D+ W P + +I +G ED V ++ G+ S T+ I + + T
Sbjct: 316 VTDVKWLPGSHLIIQAG-EDKEVRIYDSRTLGIVRSFTKKQYI-QMSCDVTADGQFCLTC 489
Query: 143 RNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSW---SRNGSLICTASKDKKVR 199
N GC+ +W + G ++ N H + I + +++ +LI TAS+D VR
Sbjct: 490 SNGFGGNGCE--ATLWQLSDG-SIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVR 660
Query: 200 VIDPRKQEIVAEKEKAHEGARPMRA-IFLADGNVFTTGFS 238
V + +E V E+ EG P+ + I DG+V F+
Sbjct: 661 VWNMFTKECVCEQN--FEGTGPLTSMIAYGDGSVLVGTFN 774
>02147
Length = 1547
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 53 SGGGAFLVLPL-HKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQ 109
+GG F + ++TG+ +S+ GH GPV + + P + ++ ASGSED T+ +WQ
Sbjct: 719 AGGEDFKMYKFDYETGKEIESFK---GHFGPVHCVRFSP-DGELYASGSEDGTLRLWQ 880
>01327
Length = 2215
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Frame = +3
Query: 83 VLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTA 142
V D+ W P + +I +G ED V ++ G+ S T+ I + + T
Sbjct: 426 VTDVKWLPGSHLIIQAG-EDKEVRIYDSRTLGIVRSFTKKQYI-QMSCDVTADGQFCLTC 599
Query: 143 RNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSW---SRNGSLICTASKDKKVR 199
N GC+ +W + G ++ N H + I + +++ +LI TAS+D VR
Sbjct: 600 SNGFGGNGCE--ATLWQLSDG-SIQNEFKGHREAIEACLFLPSNQDMTLIATASRDCSVR 770
Query: 200 VIDPRKQEIVAEKEKAHEGARPMRA-IFLADGNVFTTGFS 238
V + +E V E+ EG P+ + I DG+V F+
Sbjct: 771 VWNMFTKECVCEQN--FEGTGPLTSMIAYGDGSVLVGTFN 884
>18981
Length = 407
Score = 34.3 bits (77), Expect = 0.12, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Frame = -2
Query: 91 HNDQV---------IASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPT 141
HND V + SGS D T++VW++ PV L GH++ + V +
Sbjct: 301 HNDDVECVCIYGRRVVSGSWDKTLIVWEVDTG-------RPVHQLHGHTEAITAVQFD-- 149
Query: 142 ARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSR 184
+S D + W + TG+ L+ + +Y V +++
Sbjct: 148 -EGKAVSGSADGDVRTWALDTGQCLLTMTTGQDIEVYCVVYNQ 23
>15745
Length = 1183
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Frame = +2
Query: 136 VAWHPTARNVLLSAGCDNAIIIW--NVGTGEA----LINLDDMHSDMIYNVSWS--RNGS 187
+ WHPT + + C++ +I+W NV + A +I L+ + W+ N +
Sbjct: 446 ILWHPTGDSQTVLGVCEDRVIMWDLNVASSSAQQTDMITLEGKGQPRLTCGRWNPHHNCA 625
Query: 188 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGA------RPMRAIFLADGNVFTTGFSRMS 241
I TA+ + +R D R ++ + E AH P R +LA S
Sbjct: 626 QIATAN-EATIRGWDLRSKQQTYQMEGAHGQLVRDLDFNPNRQYYLA---------SCGD 775
Query: 242 ERQLALWNPKNMQEPIAL 259
+ ++ W+ +N EP+ +
Sbjct: 776 DCRVKFWDTRNCSEPLKV 829
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 71 KSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHS 130
++Y H V D+D+ P+ +AS +DC V W T + +EP+ +L HS
Sbjct: 683 QTYQMEGAHGQLVRDLDFNPNRQYYLASCGDDCRVKFWD------TRNCSEPLKVLSDHS 844
Query: 131 KRV 133
V
Sbjct: 845 HWV 853
>04088
Length = 511
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 GHTGPVLDIDWCPHN-DQVIASGSEDCTVMVWQIPENGLTLSL----TEPVVILEGHSKR 132
GH ID C +N D ++ SGSED V W + E L +L T PV L H
Sbjct: 150 GHKHSQYKIDSCLNNEDTLVVSGSEDGKVYFWDLVEAKLVDTLDHKTTRPVHSLSFHHAE 329
Query: 133 VGIVAWHPTARNVLLSAGCDNAIIIW 158
+ L C + + +W
Sbjct: 330 ------------LCLMTACADKVFLW 371
>05642
Length = 445
Score = 32.3 bits (72), Expect = 0.44, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Frame = -1
Query: 78 GHTGPVLDIDWCPHN-DQVIASGSEDCTVMVWQIPENGLTLSL----TEPVVILEGHSKR 132
GH ID C +N D ++ SGSED V W + E L +L T PV L H
Sbjct: 421 GHKHSQYKIDSCLNNEDTLVVSGSEDGKVYFWDLVEAKLVDTLDHKTTRPVHSLSFHHAE 242
Query: 133 VGIVAWHPTARNVLLSAGCDNAIIIW 158
+ L C + + +W
Sbjct: 241 ------------LCLMTACADKVFLW 200
>31864
Length = 545
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 158 WNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRVID 202
W+V G+ +++ H+ I ++ S++G++ TASKD ++ D
Sbjct: 2 WDVRKGQKVVDSGVDHTGGINDMQLSKDGTMFVTASKDTTAKLFD 136
>03395
Length = 2795
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%)
Frame = +2
Query: 92 NDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGC 151
ND+ S S D + ++W + N T ++L + V + ++L S G
Sbjct: 179 NDRCCVSASTDGSTIIWDLITN------TRSQIVLA--NTLFKCVCFGGKDLHILTS-GT 331
Query: 152 DNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRVIDPRKQEI 208
D+ I W VG G L L+ + I + R+G I T +D +++ + E+
Sbjct: 332 DHKIGYWEVGDGGLLRELEGSQTGAINTIDIDRDGQTILTGGEDSLLKLWRYNEGEV 502
>19863
Length = 502
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 96 IASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAI 155
+ SGS D +++VW + ENG+ + L+GH+ V V + + LLS DN +
Sbjct: 16 LVSGSSDMSIVVWDV-ENGV------QKLRLQGHAGWVNDVHF-SQDQCWLLSCSNDNTV 171
Query: 156 IIWNV 160
IWN+
Sbjct: 172 RIWNI 186
>14500
Length = 1238
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Frame = +3
Query: 88 WCPHNDQVIAS--GSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTARNV 145
WCP ++AS G+ D + W G LS + +V + W R +
Sbjct: 225 WCPWQPSLLASGGGTADRHIHFWNC-NTGTNLSSVDT-------KSQVCALLWSKEHREL 380
Query: 146 LLSAG-CDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRV---- 200
+ S G N +IIW + L H+ + +++ S +G + +A+ D+ +R+
Sbjct: 381 ISSHGFAQNQLIIWKYPAMSRVAELTG-HTARVLHMAMSPDGETVVSAAADETLRLWKCF 557
Query: 201 -IDPRK---QEIVAEKEKA 215
+D K ++ V EK +A
Sbjct: 558 TVDKEKKRPKQKVQEKNQA 614
>15118
Length = 1074
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%)
Frame = +3
Query: 65 KTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVV 124
++G+ S+ H V + + N +I +G DC + W+ L + +
Sbjct: 147 QSGKHRGSFGDTVAHVSGVRGVAFDAFNCLLITAGG-DCDIKFWRFGSRDRARVLLKELK 323
Query: 125 ILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSR 184
+ EG S+ + H + N+L D + + +V T ++ + HS+ I ++S+S
Sbjct: 324 MSEGISR----ILLHRDS-NMLAVVLEDFTVSVIDVDTLR-VVRVFSGHSNSITDLSFSG 485
Query: 185 NGSLICTASKDKKVR 199
+G + TAS D VR
Sbjct: 486 DGRWLITASMDCTVR 530
>27681
Length = 465
Score = 28.9 bits (63), Expect = 4.7, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 64 HKTGR-IDKSYPTVCGHTGPVLDIDWCPH 91
H GR + + Y TV H+ P LD+DW H
Sbjct: 359 HYMGRQLRELYTTVRFHSAPALDVDWQTH 445
>26107
Length = 1338
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 158 WNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRVID 202
W G ++ H++ +++ SW N S TAS D+ V + D
Sbjct: 1135 WRYGQDSPTVHRWXAHNNAVFDYSWISNDSQCLTASGDQTVALWD 1001
>25880
Length = 423
Score = 28.5 bits (62), Expect = 6.9, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 157 IWNVGTGEALINLDDMHSDMIYNVSWSRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAH 216
+WN +G + + H ++ +V++ + I T S +K VRV + + + E H
Sbjct: 11 VWNAVSGAEIHSFQ--HKHIVKSVAFDNSSENIVTGSNEKLVRVFNLEQPDAEPELYGGH 184
Query: 217 EGA--RPMRAIFLADGNV 232
GA R + A DG +
Sbjct: 185 TGAIKRALYASGSEDGTL 238
>05303
Length = 782
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Frame = -3
Query: 146 LLSAGCDNAIIIWNVGTGEALINLDDMHS-----------DMIYNVSWSRNGSLICTASK 194
+ G DN++ +WNV +AL+ + HS + I V+ + L+ T SK
Sbjct: 657 FIMGGQDNSVSLWNVNKKKALVCVTSAHSGCSQIEGSKGENWITAVASLQFTDLVATGSK 478
Query: 195 DKKVRV 200
D +R+
Sbjct: 477 DGCIRL 460
>38362
Length = 1255
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 167 INLDDMHSDMIYNVSWSRNGSLICTASKDKKVRV 200
+ L D H ++ VSW+ G+++ ++ D VR+
Sbjct: 637 VGLFDSHDSQVWRVSWNVTGTILVSSGADGCVRI 536
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31543950|ref|NP_084205.2| vacuolar sorting protein
33a [Mus musculus]
(598 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12886 337 1e-92
13186 72 5e-13
30185 31 1.2
>12886
Length = 2104
Score = 337 bits (863), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 160/267 (59%), Positives = 211/267 (79%), Gaps = 8/267 (2%)
Frame = +1
Query: 335 EIKQFASQLPHMQAARGSLANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTDKVNSY 394
E+KQF S+LPH+QA+R SLA HTSIAEL+K+ T ++DF D L +QEF++G++TDKV+
Sbjct: 1 EMKQFVSKLPHLQASRQSLATHTSIAELVKEFTDTDDFIDALRCQQEFINGLETDKVHPL 180
Query: 395 IEDCIAQKHPLIKVLRLVCLQSVCNSGLKQKVLDYYRREILQTYGYEHILTLNNLEKAGL 454
IE+ IA+ L KVLRL+C+QS+CN GLK KVLD+YR EILQ YG+EH+LTL+ LE+ GL
Sbjct: 181 IEEYIAKSESLSKVLRLICIQSICNDGLKPKVLDFYRHEILQVYGFEHMLTLHYLEQVGL 360
Query: 455 LKAQTGGRNNYPTIRKTLRLWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIE 514
L+ G +Y +RK+L+L +++VNEQNP+DI+YVYSGYAPLSVRLAQ L+RPGWRSI
Sbjct: 361 LRPH--GARSYQVLRKSLKLIVEEVNEQNPSDIAYVYSGYAPLSVRLAQYLARPGWRSIT 534
Query: 515 EVLRILPGPHFEERQPLPTGLQKKR--------QPGENRVTLVFFLGGVTFAEIAALRFL 566
EVL +LPGP EE Q +P L+K+R GE ++TLV+FLGGVTFAEIAALRFL
Sbjct: 535 EVLNLLPGPRVEEVQQIPPALRKRRASITSTQSSSGEQKLTLVYFLGGVTFAEIAALRFL 714
Query: 567 SQLEDGGTEYVIATTKLMNGNSWIEAL 593
+Q +DGGT+YV+AT+ LM+G+ ++ L
Sbjct: 715 AQQDDGGTDYVVATSNLMSGHRLLDCL 795
>13186
Length = 777
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Frame = -2
Query: 538 KRQPGENRVTLVFFLGGVTFAEIAALRFLSQLED-----GGTEYVIATTKLMNGNSWIEA 592
+ GE ++TLV+FLGGVTFAEIAALRFL+Q +D GGT+YV+AT+ LM+G+ ++
Sbjct: 752 QSSSGEQKLTLVYFLGGVTFAEIAALRFLAQQDDEDCFSGGTDYVVATSNLMSGHRLLDC 573
Query: 593 L 593
L
Sbjct: 572 L 570
>30185
Length = 397
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -3
Query: 398 CIA-QKHP--LIKVLRLVCLQSVCNSGLKQ 424
CI QKH LIKV LVCL+S CN LK
Sbjct: 158 CICXQKHTECLIKVCILVCLRSTCNVSLKH 69
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31980808|ref|NP_058572.2| eukaryotic translation
initiation factor 3, subunit G [Mus musculus]
(320 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01278 335 1e-92
29459 80 8e-16
00302 53 2e-07
17681 51 6e-07
25691 47 1e-05
03744 46 2e-05
02502 46 2e-05
20488 46 2e-05
30672 45 4e-05
14637 45 6e-05
11687 44 8e-05
23322 44 9e-05
14258 44 9e-05
12350 44 1e-04
31618 44 1e-04
03000 43 1e-04
12506 42 2e-04
31310 42 4e-04
13457 42 5e-04
33516 42 5e-04
00556 41 8e-04
23250 40 0.001
15371 40 0.001
02343 40 0.001
11019 39 0.002
03059 39 0.003
11126 39 0.004
01937 38 0.007
16427 37 0.009
11108 37 0.013
00781 35 0.038
01065 35 0.046
39789 35 0.059
00738 34 0.077
19733 33 0.11
15503 33 0.18
00029 32 0.37
16016 32 0.45
15994 31 0.68
31364 29 2.2
36030 29 2.5
18706 29 2.8
12037 28 4.1
16077 28 4.3
21440 28 5.7
31265 27 7.5
17775 27 8.8
>01278
Length = 1082
Score = 335 bits (860), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/262 (63%), Positives = 204/262 (77%), Gaps = 7/262 (2%)
Frame = +2
Query: 64 IKTVTEYKIEEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVS 123
+K +TE+K E+GK K V+T++ +T K SK++A+RK WKKFG +E DPPGPN A T +S
Sbjct: 119 LKKITEFKYNEEGKIVKTVKTYQTKTLKVSKSIAQRKTWKKFGAAEMDPPGPNPANTVIS 298
Query: 124 DDVSMTFITSKEDLNCQEEEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTLGPMQKELA 183
+++ M F+ S E +EE+DP+ KLK QKIV+CRICKGDHWTT+CPYKDTL P+Q++L
Sbjct: 299 EEIFMQFVNSSEQKQPEEEDDPLGKLKNQKIVTCRICKGDHWTTKCPYKDTLAPLQEKLT 478
Query: 184 EQLGLSTGEKEKLPGELEPVQAAQSKTG------KYVPPSLRDGASR-RGESMQPNRRAD 236
E ++ P + P +A + G KYVPPS+RDGA++ RGESM N+R D
Sbjct: 479 ED--------QRKPTDT-PAPSAAAGPGPKPAGTKYVPPSMRDGANKGRGESMA-NQRKD 628
Query: 237 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARA 296
+ ATIRVTNLSEDTRE+DLQELFRPFG ISRIYLAKDK TGQSKGFAFI+FHRREDA+RA
Sbjct: 629 EAATIRVTNLSEDTRESDLQELFRPFGPISRIYLAKDKVTGQSKGFAFINFHRREDASRA 808
Query: 297 IAGVSGFGYDHLILNVEWAKPS 318
IAGVSGFGYDHLILNVEWAKPS
Sbjct: 809 IAGVSGFGYDHLILNVEWAKPS 874
>29459
Length = 466
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = -2
Query: 80 KIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNC 139
K++RT++I + K VA+R+ W KFG S+ D PGPN TT VS+++ M F+ SKED
Sbjct: 246 KVIRTYKISKQVVPKTVAKRRTWTKFGESKNDKPGPNSQTTMVSEEIIMQFLNSKED--- 76
Query: 140 QEEEDPMNKLKGQKIVSCRICKGDHW 165
++ DP+ + I CRIC G+HW
Sbjct: 75 EKANDPLLD-PTKNIAKCRICNGEHW 1
>00302
Length = 927
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Frame = -1
Query: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
D N + + LS T+E L+E+F +G IS + + D+ TG+S+GFAF+ F EDA
Sbjct: 474 DPNRCLGIFGLSLYTQERGLREVFGRYGHISEVQVVYDRQTGRSRGFAFVYFKSSEDAHE 295
Query: 296 AIAGVSGFGYDHLILNVEWA 315
A +G D + V+++
Sbjct: 294 AKDRCNGIEIDGRKIRVDFS 235
>17681
Length = 964
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +2
Query: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGV 300
I V +LS + L+E F PFG IS + +D T +SKG+AF+SF ++ +A AI +
Sbjct: 38 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAM 217
Query: 301 SG 302
+G
Sbjct: 218 NG 223
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +2
Query: 255 LQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAI 297
+ + F FG I + + KDK GFAFI F +E AARAI
Sbjct: 473 MHKHFMQFGPIQDVRVFKDK------GFAFIKFVTKEAAARAI 583
>25691
Length = 768
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = -2
Query: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHR 289
+P+ + A + ++ L + + DL+ LF G+I + D+TTG SKG FI F +
Sbjct: 287 RPSCESIKGANLYISGLPKSLTQLDLENLFTDCGNIITSRILYDQTTGLSKGVGFIRFDQ 108
Query: 290 REDAARAIAGVSGFGYDHLI--LNVEWAK-PSTN 320
R +A RAI ++ D I + V++A PS+N
Sbjct: 107 RIEAERAIQKLNNHIPDGCIDPITVKFANSPSSN 6
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = -2
Query: 270 LAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPS 318
L +DK TGQS G+ F+++ R+EDA +AI ++G + + V A+PS
Sbjct: 425 LIRDKPTGQSLGYGFVNYKRQEDADKAIHTLNGLRLQNKTIKVSLARPS 279
>03744
Length = 3486
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = -1
Query: 204 QAAQSKTGKYVPPSLRDGASRRG-ESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPF 262
Q A S + P + A+ G S P D A + + +L ++ + DL ++F PF
Sbjct: 3324 QYAASFPNAFNPQAQMQQANSAGKHSEGPRVPGPDGANLFIYHLPQEFGDQDLMQMFMPF 3145
Query: 263 GSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGF 303
G++ + DK T SK F F+S+ A AI ++GF
Sbjct: 3144 GNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAAITSMNGF 3022
>02502
Length = 1557
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = -3
Query: 232 NRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRE 291
N+ + N T+ ++ E + F+ FGSI + + KDK GFAFI F+ ++
Sbjct: 1462 NQSSQTNCTVYCGGVNNGLTEELMHNTFKDFGSILEVRIFKDK------GFAFIRFNNKD 1301
Query: 292 DAARAIAGVSGFGYDHLILNVEWAKPST 319
A AI + G + ++ W K S
Sbjct: 1300 AATNAICTIHGTVINDQVVRCSWGKESN 1217
>20488
Length = 3281
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 237 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARA 296
D A + + +L ++ + DL ++F PFG++ + DK T SK F F+S+ A A
Sbjct: 2702 DGANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDSPLAAQAA 2881
Query: 297 IAGVSGF 303
I ++GF
Sbjct: 2882 ITSMNGF 2902
>30672
Length = 877
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +3
Query: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHR 289
QP + + + NL+ +E D++ F FG+IS + + K +S+GFAF+ F
Sbjct: 378 QPKQELGKRCRLIIRNLAFKCKEADIRSHFGKFGTISEVTIPL-KQGDRSRGFAFVQFTE 554
Query: 290 REDAARAIAGVSGFGYDHLILNVEWA 315
+ A +AI+ ++G + V+WA
Sbjct: 555 VKAAQKAISDMNGTAIMDRPVAVDWA 632
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 240 TIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARA 296
T+ V NL +T L E F G + ++ K G+ +GF ++ F EDA +A
Sbjct: 15 TLFVRNLPFETSNEKLLEAFEQVGPLKTAFVVAGKEPGKCRGFGYVQFSMLEDAIKA 185
>14637
Length = 455
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = -1
Query: 229 MQPNRRAD-----DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFA 283
MQ N A D + + + +L ++ + DL ++F PFG++ + DK T SK F
Sbjct: 248 MQQNAAAKQSEGPDGSNLFIYHLPQEFGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFG 69
Query: 284 FISFHRREDAARAIAGVSGF 303
F+S+ A AI+ ++GF
Sbjct: 68 FVSYDSPMSAQDAISSMNGF 9
>11687
Length = 676
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +3
Query: 237 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRE---DA 293
D+ + V + + E +L+++F +G + + + +DK TGQSKG F++F R+ DA
Sbjct: 144 DSIKMFVGQIPRNMDENELRKMFEDYGPVHSLNILRDKNTGQSKGCCFVTFFTRKAALDA 323
Query: 294 ARAIAGVSGFGYDH 307
A+ V H
Sbjct: 324 QNALHNVKTMPMMH 365
>23322
Length = 471
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = -2
Query: 243 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAI 297
V + EDT E +++ F FG I+ + L +DK TG+++GF F++F + +A+
Sbjct: 398 VGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFCFVTFGDHDSVDKAV 234
>14258
Length = 1063
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +2
Query: 246 LSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGY 305
L+ + DL ++F PFG++ + DK T SK F F+S+ A AI+ ++GF
Sbjct: 83 LAPGVGDQDLMQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDSPMSAQDAISSMNGFQI 262
Query: 306 DHLILNVEWAKP 317
L V+ +P
Sbjct: 263 GMKRLKVQLKRP 298
>12350
Length = 975
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -2
Query: 243 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 298
V L + E DL+ F FG + + + KD TGQSKGF FI F E + +A
Sbjct: 608 VLGLPWKSTEDDLRSYFSQFGDLLMVQVKKDPKTGQSKGFGFIRFAEYESQLKCMA 441
>31618
Length = 716
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +1
Query: 216 PSLRDGASRRGESMQPNRRADDNAT--IRVTNLSEDTRETDLQELFRPFGSISRIYLAKD 273
P+L+ A + MQP R T + V LS +T E +L++ F +G I I + D
Sbjct: 229 PALQMAAQK----MQPLRVTSVMMTEKLFVGGLSWETTEKELRDHFGKYGEIESINVKTD 396
Query: 274 KTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLI 309
TG+S+GFAFI F E AI VS +H+I
Sbjct: 397 PQTGRSRGFAFIVFTNTE----AIDQVSA-AEEHII 489
>03000
Length = 778
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +3
Query: 243 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAI 297
V + EDT E +++ F FG I+ + L +DK TG+++GF F++F + +A+
Sbjct: 372 VGGVKEDTTEDMIRDTFNEFGEITGVDLIQDKGTGKNRGFCFVTFGDHDSVDKAV 536
>12506
Length = 1056
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%)
Frame = -3
Query: 255 LQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEW 314
L F PFG I I + D T + +GFAFI F EDAA AI ++ + V
Sbjct: 1015 LHAAFLPFGDIVDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNMNESELFGRTIRVNL 836
Query: 315 AKP 317
AKP
Sbjct: 835 AKP 827
>31310
Length = 469
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = -3
Query: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGV 300
I V +++ + RE +++ F PFG I + L+ D T + KGF+FI + E A A+ +
Sbjct: 317 IYVGSINFEIREDTIKQAFLPFGPIKSVNLSWDPITNKHKGFSFIEYDVPEAAQLALEQM 138
Query: 301 SG 302
+G
Sbjct: 137 NG 132
>13457
Length = 4857
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = -1
Query: 229 MQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFH 288
+ P ++ + V L++ E D+++LF P+G+I + +D+ G SKG AF+ +
Sbjct: 3438 LTPKMTIGEDRKLFVGMLNKQQTEEDVRQLFHPYGAIEECTILRDQN-GNSKGCAFVKYS 3262
Query: 289 RREDAARAIAGVSG 302
+A AI + G
Sbjct: 3261 THSEAQAAINALHG 3220
Score = 30.0 bits (66), Expect(2) = 0.063, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -3
Query: 234 RADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSK 280
R + + + +L + + +L ++F PFG++ + D+ T QSK
Sbjct: 2437 RGPEGCNLFIYHLPQXXGDAELAQMFVPFGNVISAKVYVDRATNQSK 2297
Score = 23.1 bits (48), Expect(2) = 0.063, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 282 FAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 317
F F+SF A AI ++GF L V+ +P
Sbjct: 2294 FGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRP 2187
>33516
Length = 449
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
I V LS DT + LQ F FG I+ + ++ TG+S+GF F+SF
Sbjct: 160 IFVGGLSWDTDQDSLQGYFSQFGEITDCIVMMNQQTGKSRGFGFVSF 300
>00556
Length = 2189
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
D + I + L E ++EL FG + L +D TG SKGFAF + +
Sbjct: 750 DSDHKIFMGGLPSYLSEDQMKELLLSFGPLKSFNLVRDNATGLSKGFAFCEYLDPSVTDQ 929
Query: 296 AIAGVSGF 303
A AG++G
Sbjct: 930 ACAGLNGM 953
>23250
Length = 1617
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = -1
Query: 223 SRRGESMQPNRRA----DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
++R E Q N++A D + + ++ E ++ F FG ++R+ L++ TG
Sbjct: 1395 NKRREDSQKNKKAKGRKSDRGVVYLGHIPAGFYEPQMKRFFSQFGRVTRLRLSRSTKTGG 1216
Query: 279 SKGFAFISF 287
SKG+AF+ F
Sbjct: 1215 SKGYAFLEF 1189
>15371
Length = 383
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = -2
Query: 237 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
D A + + +L ++ + DL ++F PFG++ + DK T SK F F+S+
Sbjct: 163 DGANLFIYHLPQEFGDQDLMQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSY 11
>02343
Length = 1715
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -2
Query: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGV 300
+ + LS +T + DL L + FG+I+ D+TT + KG+ F+ F A RA+ +
Sbjct: 1258 LYIRGLSPNTTDKDLVNLCQHFGTITSTKAIIDQTTNKCKGYGFVDFDAPGAAERAVQAL 1079
Query: 301 SGFG 304
G
Sbjct: 1078 QAQG 1067
>11019
Length = 552
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 233 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
R I V LS T D++ F+ +G+I L DK T + +GFAF++F
Sbjct: 252 RMVTKTKKIFVGGLSSSTTVEDIKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTF 88
>03059
Length = 1154
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -2
Query: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTT-GQSKGFAFISFHRREDAARAIAG 299
+ V L+ + + +QE+F +G+I I L D+ SKG A++ + EDA +A+
Sbjct: 664 VHVGRLTRNVNKDHIQEIFSLYGTIKFIDLPNDRIHPNTSKGHAYVEYENPEDAEKAVKY 485
Query: 300 VSG 302
+ G
Sbjct: 484 MDG 476
>11126
Length = 1061
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = -3
Query: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHR 289
Q ++ D ++ V N+ +L++ F GS++R+ + DK +G KGFA++ F
Sbjct: 657 QEDKIEADLRSVYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKYSGHPKGFAYVEFAD 478
Query: 290 REDAARA 296
++ A
Sbjct: 477 KDSVVTA 457
>01937
Length = 1320
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1
Query: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
I V LS T D + F+ +G+I L DK T + +GFAF++F
Sbjct: 1209 IFVGGLSSSTTVEDXKNYFKAYGTIEEATLMFDKVTSRHRGFAFVTF 1069
>16427
Length = 1313
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
D + V L+E+ E L+ F FG I+ + +DK S+GF F+++ DA
Sbjct: 127 DRPGKLFVGGLAEEIDEKVLEREFSKFGRITESMVIRDKVRQVSRGFGFVTYENPMDAEE 306
Query: 296 AIAGVSG 302
A+ + G
Sbjct: 307 AVKHMDG 327
>11108
Length = 493
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -1
Query: 232 NRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
+R + + + + + D E L ++F+PFGSI + K++ Q KG+ +I F
Sbjct: 313 HRMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEWPGKEQQAAQPKGYVYIIF 146
>00781
Length = 3170
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -1
Query: 237 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARA 296
D T+ V + T + +F G+++ + L KTT + KG+AF+ F E+A +A
Sbjct: 2726 DARTVYVEGFHKFTSREWISRMFSKCGTVTYVSLPCFKTTREIKGYAFVEFQSPEEAVKA 2547
Query: 297 I 297
+
Sbjct: 2546 V 2544
>01065
Length = 1033
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGV 300
I V +LS T +++E F+ FG I +++ + + T AF+ + EDA +AI +
Sbjct: 20 IHVGSLSSSTSTREIREEFKRFGDIIDLWMPRTQPT-----IAFVVYRYEEDAEKAIRRM 184
Query: 301 SGFGYDHLILNVEWAKPSTN 320
G + V A+P +
Sbjct: 185 DGESMHGRRVRVSLARPRSQ 244
>39789
Length = 361
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +1
Query: 239 ATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAI 297
+ + V NLS DT + L++ F P + +RI AK + T + +GF F+ F +DAA A
Sbjct: 88 SVLFVGNLSYDTDQYSLKDAF-PGATAARI--AKFQDTQKPRGFGFVEFSTPDDAASAF 255
>00738
Length = 1559
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = -2
Query: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGV 300
I V +LS T +++E F+ FG I +++ + + T AF+ + EDA +AI +
Sbjct: 1261 IHVGSLSSSTSTREIREEFKRFGDIIDLWMPRTQPT-----IAFVVYRYEEDAEKAIRRM 1097
Query: 301 SGFGYDHLILNVEWAKP 317
G + V A+P
Sbjct: 1096 DGESMHGRRVRVSLARP 1046
>19733
Length = 723
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 263 GSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 298
G ++ + L DK TGQS+G AF+ F ++ A + +A
Sbjct: 3 GELAYVRLVIDKVTGQSRGTAFVQFKEKDAADQCLA 110
>15503
Length = 570
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Frame = +1
Query: 217 SLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTT 276
+ + S++G P + N + V NL ++ ++F +G+I +I + T
Sbjct: 91 NFKMAMSKKGNVRLP---PEVNRVLYVKNLPYKITAEEMYDIFGKYGAIRQIRVG---NT 252
Query: 277 GQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEW 314
++KG AF+ + DA A +SGF + L V +
Sbjct: 253 PETKGTAFVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 366
>00029
Length = 2204
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = -3
Query: 238 NATIRV--TNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
N TI++ NL +DT +L+ LF +GS++ + K+ F F+ ++ +A
Sbjct: 2145 NMTIKIFIGNLGDDTDPEELRALFEKYGSVAECDVLKN--------FGFVHMVKKGEADD 1990
Query: 296 AIAGVSGF 303
AI+ ++G+
Sbjct: 1989 AISNLNGY 1966
>16016
Length = 1364
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 267 RIYLAKDKTTGQSKGFAFISF 287
RI + KDK+TG+ +GF F+SF
Sbjct: 968 RINMIKDKSTGKFRGFCFVSF 906
>15994
Length = 891
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 235 ADDNATIRVTNLSEDT-RETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDA 293
A N+ + V NL+ T + D+ +F +G+++ I + KG+AF+ ++ +A
Sbjct: 291 ASKNSRVFVGNLNTFTLSKEDVDRIFGAYGAVTGISM--------HKGYAFVQYNHPGEA 446
Query: 294 ARAIAGVSGFGYDHLILNVE 313
RA+A +G Y IL++
Sbjct: 447 RRAVAFENGSSYGGQILDLN 506
>31364
Length = 370
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 90 RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQEEED 144
R+ + + RK+W + G+ PG + T T DVS+ D N E D
Sbjct: 143 RQRNNWLDXRKDWTRXGHVHARSPGKVMTTATKQSDVSLLLSGILHD*NSHEIND 307
>36030
Length = 479
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 88 ETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDV 126
+TR+ A ++ ++ G +E DPPGPN A T + D+
Sbjct: 362 DTRRPGPDAA--QDVEEVGAAEMDPPGPNPANTVILRDL 472
>18706
Length = 899
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -3
Query: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRE 291
I VTNL + D+ ELF G + R L SKG A ++F RE
Sbjct: 135 ILVTNLHASVTQDDIIELFGAIGPLKRAKL-------MSKGQAEVAFIHRE 4
>12037
Length = 435
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 100 KNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE 141
K +++ G PGP + TT V M F TS NC E
Sbjct: 160 KEYEQLG------PGPKICFTTTDLLVHMAFTTSGVHCNCSE 53
>16077
Length = 1159
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 9/50 (18%)
Frame = +2
Query: 157 CRICKGD-HWTTRCPYKD--------TLGPMQKELAEQLGLSTGEKEKLP 197
C +C+ HW CP+KD T + +E+ E L+ KE+ P
Sbjct: 251 CVVCESVFHWAKHCPHKDQRREEIKMTXAEIGEEMEEMCNLTLFTKEQKP 400
>21440
Length = 603
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 240 TIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDK 274
+ + +L + ETD+ +L PFG ++ + + K K
Sbjct: 342 VVHIRSLPHEVTETDVVQLGMPFGKMTNVLVLKQK 238
>31265
Length = 540
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +2
Query: 241 IRVTNLSEDTRETDLQELF-RPFGS--ISRIYLAKDKTTGQSKGFAFISFHRREDAARAI 297
+ V NL T E L+++F R G I R+ +D +AF+ F REDA +A+
Sbjct: 164 LXVRNLMLTTTEETLKDVFSRAAGGREIERVKKIRD--------YAFVHFRSREDAIKAM 319
Query: 298 AGVSGFGYDHLILNVEWAKP 317
G + + V AKP
Sbjct: 320 DVTDGSTIEGSQVEVVLAKP 379
>17775
Length = 1282
Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 277 GQSKGFAFISFHRREDAARAIAGVSG 302
G+S+GF F+SF E A +A+ ++G
Sbjct: 540 GKSRGFGFVSFEEPEGAEKAVDEING 463
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6671571|ref|NP_031503.1| ADP-ribosylation factor 2
[Mus musculus]
(181 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09827 333 2e-92
08153 311 1e-85
10862 176 6e-45
32860 102 5e-24
33605 106 5e-24
11378 103 3e-23
18208 99 1e-21
06991 71 3e-13
19506 70 4e-13
18949 68 2e-12
15662 66 9e-12
11965 51 3e-07
34468 47 3e-06
29196 43 8e-05
14775 42 1e-04
13750 42 2e-04
08428 38 0.002
20877 37 0.005
19006 36 0.008
33374 36 0.009
33380 36 0.010
35581 36 0.010
33794 35 0.024
07465 34 0.032
26083 33 0.051
11728 33 0.053
13901 33 0.066
26536 31 0.25
05468 31 0.34
17511 30 0.53
01972 27 3.2
22540 27 3.5
18743 27 5.7
34359 27 6.7
11257 26 8.3
>09827
Length = 1201
Score = 333 bits (854), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/184 (87%), Positives = 169/184 (91%), Gaps = 3/184 (1%)
Frame = -3
Query: 1 MGNVFEKLFKSL---FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 57
MGN F+K+F L FGKK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct: 1172 MGNAFQKIFSGLSFMFGKKDMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 993
Query: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELR 117
YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSND+ERV EAREELTRML EDELR
Sbjct: 992 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERVQEAREELTRMLNEDELR 813
Query: 118 DAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQL 177
DAVLLVF NKQDLP+AM AEIT+KLGLH LR R WYIQ+TCAT+GDGLYEGLDWLSNQL
Sbjct: 812 DAVLLVFANKQDLPHAMATAEITEKLGLHGLRNRTWYIQSTCATTGDGLYEGLDWLSNQL 633
Query: 178 KNQK 181
KN K
Sbjct: 632 KNNK 621
>08153
Length = 1703
Score = 311 bits (796), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 146/176 (82%), Positives = 163/176 (92%)
Frame = +1
Query: 5 FEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64
F LFK+LFGKKE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 46 FVSLFKNLFGKKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 225
Query: 65 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVF 124
VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+NEA+EEL RML ED+LRDA++LVF
Sbjct: 226 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERINEAKEELARMLNEDDLRDAIILVF 405
Query: 125 VNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
NKQDLPNA +A+E+T LGL +L+ R WY+QATCATSGDG+YEGL+WLS LK++
Sbjct: 406 ANKQDLPNAYSASEVTAHLGLANLKGRKWYMQATCATSGDGMYEGLEWLSTTLKHK 573
>10862
Length = 2896
Score = 176 bits (445), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 98/129 (75%)
Frame = -3
Query: 51 FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRM 110
+ + F VWDVGGQDKIRPLWRHY+ TQGLIFVVD DR+R++EAR+EL R+
Sbjct: 2516 IQCRNCQLQECQFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRI 2337
Query: 111 LAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGL 170
+ + E+RDA++L+F NKQDLP+AM EI +KLGL LR RNWY+Q +CAT+GDGL EGL
Sbjct: 2336 INDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRLRDRNWYVQPSCATTGDGLCEGL 2157
Query: 171 DWLSNQLKN 179
WL++ K+
Sbjct: 2156 TWLTSNHKS 2130
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 49/56 (87%)
Frame = -1
Query: 7 KLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
KL +FG KEMRILM+GLDAAGKTT+LYK+KLG+ VT IPT+GFNVETV +KN++
Sbjct: 2647 KLLSKIFGNKEMRILMLGLDAAGKTTLLYKMKLGQSVTXIPTVGFNVETVSFKNVN 2480
>32860
Length = 330
Score = 102 bits (255), Expect(2) = 5e-24, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 64/89 (71%)
Frame = +2
Query: 78 WRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAA 137
W Y+ N++ +I V+DS DRER++ +EEL RMLA +ELR A LLVF NKQD+ M+AA
Sbjct: 8 WNTYYSNSEFIIMVIDSTDRERLSITKEELCRMLATEELRXAALLVFANKQDIKGCMSAA 187
Query: 138 EITDKLGLHSLRQRNWYIQATCATSGDGL 166
EI+ +L L S++ W+IQA C +G+G+
Sbjct: 188 EISXQLNLTSVKDHVWHIQACCGLTGEGV 274
Score = 24.3 bits (51), Expect(2) = 5e-24, Method: Compositional matrix adjust.
Identities = 6/16 (37%), Positives = 14/16 (87%)
Frame = +1
Query: 165 GLYEGLDWLSNQLKNQ 180
GLY+GL+W+++ ++ +
Sbjct: 271 GLYQGLEWITSHIRRR 318
>33605
Length = 888
Score = 106 bits (265), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%)
Frame = +1
Query: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74
+KE+R+LM+GLD AGKTTIL K +I T PT+GFN++T+E++ VWDVGGQ +
Sbjct: 490 EKEVRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNVWDVGGQQSL 669
Query: 75 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREE 106
R WR+YF++T GL++VVDS DR R+ + + +
Sbjct: 670 RSYWRNYFESTDGLVWVVDSADRMRIADCKRD 765
>11378
Length = 1688
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 84/134 (62%)
Frame = +3
Query: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74
KK +++ +GLD AGKTT+L+ LK ++ +PT+ E + + FT +D+GG +
Sbjct: 315 KKSGKLVFLGLDNAGKTTLLHMLKDDKMAQHVPTLHPTSEELSMGGMRFTTFDLGGHRQA 494
Query: 75 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAM 134
R +W+ YF G++F+VD +DRER+ EA+ EL ++ ++++ +A +LV NK D P A
Sbjct: 495 RRVWKDYFPAVDGIVFLVDVHDRERLVEAKAELDSLMTDEQVANAPILVLGNKIDKPGAA 674
Query: 135 NAAEITDKLGLHSL 148
+ EI GL+SL
Sbjct: 675 SEEEIRHWFGLNSL 716
>18208
Length = 458
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 64/88 (72%)
Frame = -1
Query: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
+E+RIL++GLD AGKTT+L +L + PT GFN+++V+ K VWD+GGQ +IR
Sbjct: 305 RELRILLLGLDNAGKTTLLKQLASEDPSHITPTQGFNIKSVQSKGFKLNVWDIGGQRRIR 126
Query: 76 PLWRHYFQNTQGLIFVVDSNDRERVNEA 103
P W++YF+NT LI+V+DS+D +R+ E
Sbjct: 125 PYWKNYFENTDLLIYVIDSSDTKRMEET 42
>06991
Length = 1860
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = -2
Query: 111 LAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGL 170
L EDEL+ ++L+VF NKQD+ AM E+ + LGL L+ R + I T A G+GL E +
Sbjct: 1859 LEEDELKKSILMVFANKQDIEGAMTVTEVANSLGLPGLKNRKYQIFKTSAVKGEGLDEAM 1680
Query: 171 DWLSNQL 177
+WLSN L
Sbjct: 1679 EWLSNSL 1659
>19506
Length = 421
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = -3
Query: 11 SLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI 61
+LF +K + ++ GLDAAGKTT+LY LKLGE+VTTIPTIGFNVET++ +
Sbjct: 155 TLFRQKPVTVIYFGLDAAGKTTLLYNLKLGEVVTTIPTIGFNVETLDMNRV 3
>18949
Length = 414
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +3
Query: 47 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREE 106
PT E + ++FT +D+GG + R +W+ YF G++F+VD +D ER+ EA+ E
Sbjct: 15 PTGLPTSEELSMGGMTFTTFDLGGHRQARRVWKDYFPAVDGIVFIVDVHDTERITEAKAE 194
Query: 107 LTRMLAEDELRDAVLLVFVNKQD 129
L +L +D++ D +LV NK D
Sbjct: 195 LDSLLRDDQIADIPVLVLGNKMD 263
>15662
Length = 455
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +2
Query: 73 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPN 132
+ R +W+ YF G++F+VD +DRER EA+ EL ++ ++++ +A +LV NK D P
Sbjct: 2 QARRVWKDYFPAVDGIVFLVDVHDRERFVEAKAELDSLMTDEQVANAPILVLGNKIDKPG 181
Query: 133 AMNAAEITDKLGLHSL 148
A + EI GLHSL
Sbjct: 182 AASEDEIRHWFGLHSL 229
>11965
Length = 3256
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 32/155 (20%)
Frame = +1
Query: 44 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEA 103
T + T G +KN++F ++DVGGQ R W H F++ +IF V ++ ++V
Sbjct: 133 TRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHE 312
Query: 104 REELTRMLAEDELRDAV----------LLVFVNKQDL--------PNAMNAAEITDKLGL 145
E RM +L D++ +++F+NK+DL P + E T K
Sbjct: 313 DETTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTVCFPEYTGKQTY 492
Query: 146 HSL--------------RQRNWYIQATCATSGDGL 166
+ Q+ Y TCAT + +
Sbjct: 493 EEVAAYIQAQFEAKNKSSQKEIYCHQTCATDTNNI 597
>34468
Length = 1502
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Frame = +1
Query: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVE----TVEYKNISFTVWDVG 69
++ +I+++G GKT + Y+ LG+ T TIG + V+ +++ +WD
Sbjct: 487 RRIFKIIVIGDSNVGKTCLTYRFCLGKFPDKTEATIGVDFREKSIQVDSEHLKLQLWDTA 666
Query: 70 GQDKIR-PLWRHYFQNTQGLIFVVD 93
GQ++ R + +HY++N ++FV D
Sbjct: 667 GQERFRKSMVQHYYRNVHAVVFVYD 741
>29196
Length = 431
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = -2
Query: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRD 118
KN++F ++DVGGQ R W H F++ +IF V ++ ++V E RM +L D
Sbjct: 229 KNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFD 50
Query: 119 AVL 121
++
Sbjct: 49 SIC 41
>14775
Length = 380
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = -2
Query: 30 KTTILYKLKLGEIV-TTIPTIG-----FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQ 83
KT +L + + G + T+PTI FN + N+ +T+WD GG + R LW +F+
Sbjct: 379 KTCLLRRYQKGFFMDRTMPTIAVLCSEFNESRTDPLNVRYTLWDTGGAETYRSLWVSHFR 200
Query: 84 NTQGLIFVVD 93
Q + V D
Sbjct: 199 GAQVALLVYD 170
>13750
Length = 503
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = -2
Query: 30 KTTILYKLKLGEIV-TTIPTIG-----FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQ 83
KT +L + + G + T+PTI FN + N+ +T+WD GG + R LW +F+
Sbjct: 502 KTCLLRRYQKGFFMDRTMPTIAVLCSEFNESRTDPLNVRYTLWDTGGAETYRSLWVSHFR 323
Query: 84 NTQGLIFVVD 93
Q + V D
Sbjct: 322 GAQVALLVYD 293
>08428
Length = 1109
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Frame = -3
Query: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVET----VEYKNISFTVWDVGG 70
+++++ ++G GK++I+ + G + TIG + + V+ F +WD G
Sbjct: 1074 RDVKVCLLGDSGVGKSSIVLRFVTGSYRPSQESTIGASFMSKSLVVDGAGYRFQIWDTAG 895
Query: 71 QDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDL 130
Q+K R L Y++ + V D R R ++ + + L + VL + NK DL
Sbjct: 894 QEKFRALAPMYYRGAAAAVIVYDVT-RPRTFKSVKSWIQELRSFGPPNIVLAIAGNKCDL 718
>20877
Length = 381
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 164 DGLYEGLDWLSNQLKN 179
DGLYEGLDWLSNQLKN
Sbjct: 381 DGLYEGLDWLSNQLKN 334
>19006
Length = 568
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Frame = -2
Query: 11 SLFGKKEMRILMVGLDAAGKTTILY---KLKLGEIVTTIPTIGFNVET---VEYKNISFT 64
S G + ++++VG A GKT +L K + E+ +PT+ N V+ K +
Sbjct: 456 STNGCHKEKLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDSKQVELA 283
Query: 65 VWDVGGQ---DKIRPLWRHYFQNTQGLI--FVVDSNDR-ERVNEAREELTRMLAEDELRD 118
+WD GQ D++RPL + +T ++ F +DS D E + E R +
Sbjct: 282 LWDTAGQEDYDRLRPL---SYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCP----N 124
Query: 119 AVLLVFVNKQDLPNAMNAAEITDKLGLHSLR 149
+++ NK+DL N N K+ +R
Sbjct: 123 VPIILVGNKKDLRNDENTKRELMKMKQEPVR 31
>33374
Length = 489
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAR---EELTRMLAEDELR 117
+ F +WD GQ++ L Y++ Q I V D +++ A+ +EL R +
Sbjct: 175 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASP---- 342
Query: 118 DAVLLVFVNKQDLPN 132
+ V+ + NK DL N
Sbjct: 343 NIVIALAGNKADLAN 387
>33380
Length = 282
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRD 118
K + +WD GQ++ R + Y++ G I + D + E N ++ T++
Sbjct: 54 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFNAVQDWCTQIKTYSWDNA 233
Query: 119 AVLLVFVNKQDLPN 132
V+LV NK DL +
Sbjct: 234 QVVLVG-NKCDLED 272
>35581
Length = 364
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +2
Query: 18 MRILMVGLDAAGKTTILYKLK----LGEIVTTIPTIGFNVETVEYKN---ISFTVWDVGG 70
+ +++G GKT +L +L L +T++ T + TV + S +WD G
Sbjct: 47 FKCVLLGDAGVGKTCLLNRLATDKFLDSPLTSLTTASL-LTTVTLTSGVMASVDLWDTAG 223
Query: 71 QDKIRPLWRHYFQNTQGLIFVVDSNDRERVNE 102
Q++ R L Y+++T+ ++ V D+ + ++ +
Sbjct: 224 QERYRSLTSSYYRDTKAVLIVYDAEHKLKLTD 319
>33794
Length = 779
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 48 TIGFNVETV--EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93
T+ + T+ E K + +WD GQ + + R Y + QG+I V D
Sbjct: 695 TVAYKTTTILLEGKRVKLQIWDTSGQGRFCTIIRSYSRGAQGIILVYD 552
>07465
Length = 1103
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Frame = +3
Query: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRD 118
+++ +WD GQ++ + + Y++ Q + + DR+ EA E R + EDE+ +
Sbjct: 339 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTVDRDSF-EALETWKRKV-EDEVGE 512
Query: 119 AVLLVFVNKQDL 130
+++ NK DL
Sbjct: 513 IGMVIVQNKIDL 548
>26083
Length = 432
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Frame = +1
Query: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVET----VEYKNISFTVWDVGG 70
++ +++ +G + GKT+++ + T TIG + + +E + I +WD G
Sbjct: 73 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAG 252
Query: 71 QDKIRPLWRHYFQNTQGLIFVVD 93
Q++ R L Y +++ + V D
Sbjct: 253 QERFRSLIPSYIRDSSVAVVVYD 321
>11728
Length = 635
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = -1
Query: 12 LFGKKEMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVET---VEYKNISFTVWD 67
F + ++ ++VG A GKT +L IPT+ N V+ K I+ +WD
Sbjct: 506 FFNMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPINLGLWD 327
Query: 68 VGGQ---DKIRPL 77
GQ D++RPL
Sbjct: 326 TAGQEDYDRLRPL 288
>13901
Length = 962
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Frame = -3
Query: 18 MRILMVGLDAAGKTTIL-----------YKLKLGEIVTTIPTIGFNVETVEYK---NISF 63
+++++G GKT+ + YK+ +G + F ++ + + NI
Sbjct: 285 FKVIIIGDPTVGKTSFVQRYVNDSFRRDYKMTIG--------VDFALKVIRWSDKCNIKL 130
Query: 64 TVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93
+WD+ GQ++ + R Y+++ I + D
Sbjct: 129 QLWDIAGQERFTSMTRVYYKDAHACIVMFD 40
>26536
Length = 829
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Frame = +2
Query: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRD 118
+ +S+T D GQ++ + HY ++ G I V D EA E + R L +
Sbjct: 122 RRVSWTFLDTAGQEEYSSMREHYTRSGDGFIVVYSVTDVTSFQEA-EAVFRWLTRFQDET 298
Query: 119 AVLLVFV-NKQDLPN-----AMNAAEITDKLGLHSLRQRNWYIQATCATSGDG---LYEG 169
++ V NK DL + ++ D+LG+ Y + T A +GD +Y G
Sbjct: 299 SIHAVLCGNKTDLTSDRKVTPEEGRKMADRLGM-------LYFE-TSAKTGDNVSQVYHG 454
Query: 170 L 170
L
Sbjct: 455 L 457
>05468
Length = 1558
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Frame = -3
Query: 15 KKE--MRILMVGLDAAGKTTIL-----------YKLKLGEIVTTIPTIGFNVETVEYKNI 61
KKE +IL++G GKT+I+ Y+ +G + + + ++ +T+ I
Sbjct: 1553 KKEHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG-VDFALKVLNWDADTL----I 1389
Query: 62 SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93
+WD+ GQ++ + R Y++ G V D
Sbjct: 1388 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFD 1293
>17511
Length = 483
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Frame = -3
Query: 18 MRILMVGLDAAGKTTIL-----------YKLKLGEIVTTIPTIGFNVETVEYKNISFTVW 66
++++++G GKT+++ YK +G T + V+ + ++ +W
Sbjct: 364 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 203
Query: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERVNEAREELTRMLAEDELRDAVLLV 123
D GQ++ + L +++ + V D N ++ R+E + + + +V
Sbjct: 202 DTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFRSLDSWRDEFLIQASPRDPENFPFVV 23
Query: 124 FVNKQDL 130
NK DL
Sbjct: 22 IGNKIDL 2
>01972
Length = 2359
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 46 IPTIGFNVETVEYKN----ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 97
+ T+G V + + + F VWD GQ+K L Y+ Q + + D R
Sbjct: 390 VATLGVEVHPLLFHTSRGKLKFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSR 557
>22540
Length = 337
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 166 LYEGLDWLSNQLKN 179
LYEGLDWLSN+L +
Sbjct: 2 LYEGLDWLSNELAS 43
>18743
Length = 465
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = +2
Query: 20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV------ETVEYKNISF 63
I MVGL A GKT I KL I T FNV T YKN +F
Sbjct: 131 IAMVGLPARGKTYISKKLTRYLNWIGISTRAFNVGEYRRAATNSYKNHNF 280
>34359
Length = 1042
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 46 IPTIGFNVETVEYKN----ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 97
+ T+G V +++ + F VWD GQ+K L Y+ I + D R
Sbjct: 138 VATLGVEVHPLQFNTSRGLLRFNVWDTAGQEKFGGLRDGYYIQGTCAIIMFDVTSR 305
>11257
Length = 1102
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/95 (17%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Frame = -2
Query: 46 IPTIGFNVETVEYKNI-----SFT--VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 98
+P++ + V +K++ +FT +WD GQ++ + L +++ T + ++ +
Sbjct: 1092 MPSLPHDRRGVPHKDVVVDGETFTMQIWDTAGQERYKSLRTPFYRGTDCCLLTFSVDNLK 913
Query: 99 RVNEAREELTRMLAEDELRDAVLLVFV---NKQDL 130
+ + + +++D+ FV NK D+
Sbjct: 912 SLQSLSDWYDEFVNYADIQDSASFPFVIIGNKADI 808
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|74218637|dbj|BAE25199.1| unnamed protein product [Mus
musculus]
(1453 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
13259 337 2e-92
30880 92 1e-18
17703 56 9e-08
11801 32 1.6
06426 31 3.7
>13259
Length = 1751
Score = 337 bits (865), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/249 (65%), Positives = 202/249 (81%)
Frame = +2
Query: 8 SLQRPRYGSIVDDERLSAEEMDERRRQNIAYEYLCHLEEAKRWMEVCLVXXXXXXXXXXX 67
+ ++P Y ++ +D RL+A+EMDE+R++NIAYEYLCHLEEAK W++ C+
Sbjct: 275 AAEKPHYRTL-EDARLTADEMDEQRKRNIAYEYLCHLEEAKVWIQACINEDLPPTTELEE 451
Query: 68 GLRNGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKKSGLHFRHTDNTVQWLRAMEAIGLPK 127
GLRNGV+LAKL FFA +VS KKIYD +QTRYK GLHFRHTDN WLRAME +GLP
Sbjct: 452 GLRNGVFLAKLGHFFAAXVVSLKKIYDKDQTRYKSRGLHFRHTDNINHWLRAMEEVGLPT 631
Query: 128 IFYPETTDVYDRKNIPRMIYCIHALSLYLFKLGIAPQIQDLLGKVDFTEEEISNMRKELE 187
IFYPETTD+YDRKNIPR +YC+HALSLYLFKLG+APQIQDL GK++FTEEEIS MR EL+
Sbjct: 632 IFYPETTDIYDRKNIPRAVYCVHALSLYLFKLGLAPQIQDLYGKINFTEEEISAMRSELD 811
Query: 188 KYGIQMPAFSKIGGILANELSVDEAALHAAVIAINEAIEKGVAKQTIITLRNPNAVLTCV 247
KYGIQMPAFSKIGGILANE++VD+AALHAA+IAINEA+++ VA T+ ++N +A+L +
Sbjct: 812 KYGIQMPAFSKIGGILANEMTVDDAALHAAIIAINEAVDQQVAADTMTAMQNASAMLVNL 991
Query: 248 DDSLSQEYQ 256
D ++Q YQ
Sbjct: 992 DPDVAQHYQ 1018
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 116/286 (40%), Gaps = 7/286 (2%)
Frame = +2
Query: 321 NTLLALKKPEAQLPAVYPFAAVMYQNELFNLQKQNTSNYLAHEELLIAVEMLSAVALLNQ 380
+T+ A++ A L + P A YQ++L++ + H + +A L + L Q
Sbjct: 944 DTMTAMQNASAMLVNLDPDVAQHYQDQLYSAK---------HTKAEVARNKLEEIKSLAQ 1096
Query: 381 ALESSDLVAV-QNQLRSPTIGFN------NLDEAHVDRYADALLSVKQEALSQGQDTLSW 433
L++ L+ +++ T G + N +D V E L+Q
Sbjct: 1097 RLQNPSLILYGTHEMTQGTRGGDGMPVKXNGQPGSIDPERSYDHDVYDELLTQA------ 1258
Query: 434 NEIQNCIDMINNQIQEENDRMVVLGYINEAIDAGNXXXXXXXXXXXXANIRDVDPDCAQH 493
EIQ I+ +N V L +N+A+ G+ +RDV D A++
Sbjct: 1259 -EIQGXINKVNIS--------VALDRVNDALLKGDLSLLLAALRVPSLGLRDVTDDNAEY 1411
Query: 494 YQDVLFYTKSQKLGDPKNVSKVLWLDEIQQAINEANVDENRAKQWVTLVVDVNECLDRKQ 553
Y L K + L +E+QQAIN+AN++ + + V VN +D +
Sbjct: 1412 YAAKLREAHELKKNNNNGEEXQLDKEELQQAINQANLEASAQYEKEQAVKAVNAAIDSGE 1591
Query: 554 SDHILTALKSSPSNIHNILPECANKYYDTLVKAKESKTDNESSEGS 599
+D +L A ++S + + Y + L K K ++ EG+
Sbjct: 1592 ADQVLKAFQNSAALFPQVYDFAGXLYLEELACIKAEKQEDLDQEGN 1729
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +2
Query: 281 ERDAYEELLTQAEIQSNISTVNRMAAVDHINAVLQEGDPENTLLALKKPEAQLPAVYPFA 340
+ D Y+ELLTQAEIQ I+ VN A+D +N L +GD L AL+ P L V
Sbjct: 1223 DHDVYDELLTQAEIQGXINKVNISVALDRVNDALLKGDLSLLLAALRVPSLGLRDVTDDN 1402
Query: 341 AVMYQNELFNLQKQNTSNYLAHEELLIAVEMLSAVALLNQA-LESS 385
A Y +L + +N E L E+ A+ NQA LE+S
Sbjct: 1403 AEYYAAKLREAHELKKNNNNGEEXQLDKEELQQAI---NQANLEAS 1531
>30880
Length = 671
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%)
Frame = +3
Query: 431 LSWNEIQNCIDMINNQIQEENDRMVVLGYINEAIDAGNXXXXXXXXXXXXANIRDVDPDC 490
L+ +I + I+ ++ ++QEE +R+ + INEAID G+ A + ++DP
Sbjct: 96 LTHADIVDTIETVHQKVQEEQERIKAIESINEAIDKGDESETLASLQMPSAKLSNIDPLQ 275
Query: 491 AQHYQDVLFYTKSQKLGDPKNVSKVLWLDEIQQAINEANVDENRAKQWVTLVVDVNECLD 550
A HYQ +L K +K ++ VLWL+EIQ ++ AN + + + VNE L
Sbjct: 276 AVHYQVLLAKEKDRKAEKTQDEGAVLWLEEIQSTVDHANRNAEEGLKMSRGIQAVNEALA 455
Query: 551 RKQSDHILTALKSSPSNIHNILPECANKYYDTLVKAKESKTDNESSEGSWVTLNVQEKYN 610
+D ++ L + + H++ EC Y + L + ++ K ++ S W+ V +
Sbjct: 456 TDDTDSLVAGL-TGEAGFHSVKTECGATYAEKLKQLQQEKMESGESGSGWMMNRVADGSK 632
Query: 611 YYYNTDSKEGSWV 623
++YN +++ +W
Sbjct: 633 FFYNAHTQQYAWA 671
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Frame = +3
Query: 282 RDAYEELLTQAEIQSNISTVN--------RMAAVDHINAVLQEGDPENTLLALKKPEAQL 333
R A LLT A+I I TV+ R+ A++ IN + +GD TL +L+ P A+L
Sbjct: 75 RRAQNPLLTHADIVDTIETVHQKVQEEQERIKAIESINEAIDKGDESETLASLQMPSAKL 254
Query: 334 PAVYPFAAVMYQNELFNLQ------KQNTSNYLAHEELLIAVE-----------MLSAVA 376
+ P AV YQ L + Q+ L EE+ V+ M +
Sbjct: 255 SNIDPLQAVHYQVLLAKEKDRKAEKTQDEGAVLWLEEIQSTVDHANRNAEEGLKMSRGIQ 434
Query: 377 LLNQALESSDLVAVQNQLRSPTIGFNNLDEAHVDRYADALLSVKQEALSQGQDTLSW 433
+N+AL + D ++ L + GF+++ YA+ L ++QE + G+ W
Sbjct: 435 AVNEALATDDTDSLVAGL-TGEAGFHSVKTECGATYAEKLKQLQQEKMESGESGSGW 602
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Frame = +3
Query: 217 AVIAINEAIEKGVAKQTIITLRNPNAVLTCVDDSLSQEYQXXXXXXXXXXXXXXXXXNSC 276
A+ +INEAI+KG +T+ +L+ P+A L+ +D + YQ +
Sbjct: 171 AIESINEAIDKGDESETLASLQMPSAKLSNIDPLQAVHYQVLLAKEKDRKAEKTQDEGAV 350
Query: 277 ISEEERDAYEELLTQAEIQSNISTVNRMA--------AVDHINAVLQEGDPENTLLALKK 328
+ E EIQS + NR A + +N L D ++L+A
Sbjct: 351 LWLE------------EIQSTVDHANRNAEEGLKMSRGIQAVNEALATDDT-DSLVAGLT 491
Query: 329 PEAQLPAVYPFAAVMYQNELFNLQKQ 354
EA +V Y +L LQ++
Sbjct: 492 GEAGFHSVKTECGATYAEKLKQLQQE 569
>17703
Length = 542
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 46/58 (79%)
Frame = +3
Query: 1396 ILNEIAKDIRNQRIHRKLRKAELSKLQQTLNALNKKAAFYEDQINYYDTYIETCVDNL 1453
++N I +DIRNQR +R RK EL +++ LN+LN+K +FYE QI++Y+ Y++TC+DNL
Sbjct: 3 LINAIVQDIRNQRRYRNNRKQELLRVRNXLNSLNEKRSFYESQIDFYNQYVKTCLDNL 176
>11801
Length = 743
Score = 32.3 bits (72), Expect = 1.6, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 722 DSVVKIQSWFRMVTARKSYLSRLRYFEDHKNEI 754
D +K+ + A+ SYL RYF+DHK I
Sbjct: 164 DQFIKLDPQYDYRVAKYSYLQSYRYFDDHKQHI 66
>06426
Length = 1132
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 6/137 (4%)
Frame = +2
Query: 978 QNTLRQLLAPVVKEIIEDKALVINTNPVEVYKAWVNQLETQTGEASKLPYDVTTEQALTY 1037
+N L P+++ I D +V + AW N+L G S E L Y
Sbjct: 170 RNGLXSSFGPIIEPFIMDDCVVPKSQLEMARDAWGNELPAMLGGTS-------FEGLLMY 328
Query: 1038 PEVKNKLEASIENLRKVTDKVLGSIISSLDLLPYGLRYI---AKVLKNS---IREKFPDA 1091
P VK + S+++L ++ L ++P+ LR + K L NS I+ F D
Sbjct: 329 PSVKANJK-SLDSL----------MLDPLQMIPHELRALNTDEKNLXNSHKMIKLYFGDE 475
Query: 1092 TEEELLKIVGNLLYYRY 1108
T + L YY Y
Sbjct: 476 TPSS-THFMKMLDYYSY 523
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|31981799|ref|NP_663477.2| ER lipid raft associated 1
[Mus musculus]
(346 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
32005 176 6e-92
11691 29 2.9
00382 28 3.6
>32005
Length = 1092
Score = 176 bits (446), Expect(4) = 6e-92, Method: Compositional matrix adjust.
Identities = 81/102 (79%), Positives = 92/102 (90%)
Frame = +3
Query: 80 GGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIE 139
GGV+IY +RIEVVN L AVFDIV+NYTADYD+TLI+NKIHHELNQFCS H LQEVYI+
Sbjct: 96 GGVIIYFERIEVVNKLDTSAVFDIVKNYTADYDRTLIYNKIHHELNQFCSIHNLQEVYID 275
Query: 140 LFDQIDENLKQALQKDLNTMAPGLTIQAVRVTKPKIPEAIRR 181
LFDQIDENL+QALQ+DL +APGLT+QAVRVTKPKIPE IR+
Sbjct: 276 LFDQIDENLRQALQQDLYQLAPGLTVQAVRVTKPKIPEQIRK 401
Score = 101 bits (252), Expect(4) = 6e-92, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
Frame = +1
Query: 176 PEAIRR--NFELMEAEKTKLLIAAQKQKVVEKEAETERKRAVIEAEKIAQVAKIRFQQKV 233
P ++ R N+E ME EKTKLLI+ QKQKVVEKEAETERK+AVIEAEK AQVAKI +QQK+
Sbjct: 376 PRSLNRSANYEAMEGEKTKLLISIQKQKVVEKEAETERKKAVIEAEKQAQVAKITWQQKI 555
Query: 234 MEKETEKRISEIEDAAFL 251
MEKE+E++I+EIED L
Sbjct: 556 MEKESEQKIAEIEDLTHL 609
Score = 65.9 bits (159), Expect(4) = 6e-92, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +2
Query: 49 YHIMLPSITTFRSVQTTLQTDEVKNVPCGTSGG 81
YH MLP +T++RSVQTTLQTDEVKNVPCGTSGG
Sbjct: 2 YHFMLPVLTSYRSVQTTLQTDEVKNVPCGTSGG 100
Score = 54.3 bits (129), Expect(4) = 6e-92, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +3
Query: 271 SNKHKLTPEYLELKKYQAIASNSKIYFGSNIPSMFVD 307
+NK KLT E++E KYQA+A+N+KI+FG+ IP +F+D
Sbjct: 666 ANKMKLTKEFVEFSKYQALAANTKIFFGNQIPDIFID 776
>11691
Length = 472
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -3
Query: 61 SVQTTLQTDEVKNVPCGTSGGVMIYIDR 88
S+ L+T +V ++ G SGG++IY++R
Sbjct: 401 SIYFDLRTQKVSDIYSGGSGGILIYLNR 318
>00382
Length = 808
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = -3
Query: 107 YTADYDKTLIFNKIHHELNQF---CSAHTLQEVYIELFDQIDENLKQALQKDLNTMAPGL 163
Y+ ++F+ + H L + C H LQE E LKQ L+KD + L
Sbjct: 206 YSHQQASAIVFSPVRHMLTKLPLTCYPHCLQECV--------ERLKQTLEKDASRPLVAL 51
Query: 164 TIQAVRVTKPKIPEA 178
T + + P++ A
Sbjct: 50 TREKGKTQTPQVDRA 6
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|60687506|ref|NP_033787.2| aldolase C,
fructose-bisphosphate [Mus musculus]
(363 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12684 207 6e-92
32571 189 3e-62
04687 104 6e-23
01154 83 2e-16
19270 50 1e-06
>12684
Length = 1376
Score = 207 bits (527), Expect(2) = 6e-92, Method: Compositional matrix adjust.
Identities = 96/119 (80%), Positives = 106/119 (89%)
Frame = +1
Query: 122 ETTTQGLDGLLERCAQYKKDGADFAKWRCVLKISDRTPSALAILENANVLARYASICQQN 181
E+TTQGLDGL ERCAQYKKDGA FAKWRCVLKIS TPS A++ENANVLARYASICQQN
Sbjct: 10 ESTTQGLDGLSERCAQYKKDGAQFAKWRCVLKISKNTPSHQAMMENANVLARYASICQQN 189
Query: 182 GIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHAC 240
G+VPIVEPE+LPDG+HDL+ Q VTE+VLA YKALS+HHVYLEG+LLKPNMVT G AC
Sbjct: 190 GLVPIVEPEVLPDGEHDLETAQKVTEQVLAYTYKALSEHHVYLEGSLLKPNMVTAGQAC 366
Score = 148 bits (373), Expect(2) = 6e-92, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 89/121 (73%)
Frame = +2
Query: 243 KYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSY 302
K S E+IA+ATVTAL R VP AVPG+ FLSGGQSEE+A++NL+AIN+ PWALTFSY
Sbjct: 371 KVSHEQIAIATVTALSRXVPGAVPGICFLSGGQSEEDATINLDAINKYKGKNPWALTFSY 550
Query: 303 GRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHA 362
GRALQAS L AW+G + N AA E +KRA+ NG A G+Y G G A +SL++A HA
Sbjct: 551 GRALQASVLKAWKGNKANTDAAQGELLKRAKANGEACVGKYAGGVKGTAGGESLFVAGHA 730
Query: 363 Y 363
Y
Sbjct: 731 Y 733
>32571
Length = 515
Score = 189 bits (481), Expect(2) = 3e-62, Method: Compositional matrix adjust.
Identities = 89/115 (77%), Positives = 100/115 (86%)
Frame = -1
Query: 93 PFVRTIQDKGILVGIKVDKGVVPLAGTDGETTTQGLDGLLERCAQYKKDGADFAKWRCVL 152
PFV +++KGI+ GIKVDKGVVPLAG+ E TTQGLDGL ERCAQYKKDGA FAKWRCVL
Sbjct: 512 PFVDILKEKGIIPGIKVDKGVVPLAGSHNECTTQGLDGLSERCAQYKKDGAQFAKWRCVL 333
Query: 153 KISDRTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTE 207
KIS TPS A++ENANVLARYASICQQNG+VPIVEPE+LPDG+HDL+ Q VTE
Sbjct: 332 KISKNTPSYQAMMENANVLARYASICQQNGLVPIVEPEVLPDGEHDLQTAQKVTE 168
Score = 67.4 bits (163), Expect(2) = 3e-62, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -2
Query: 208 KVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAM 251
+VLA YKAL+DHHV+LEGTLLKPNMVT G +C KYS E+IA+
Sbjct: 166 QVLAFQYKALADHHVFLEGTLLKPNMVTAGQSCATKYSHEQIAV 35
>04687
Length = 1330
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = +2
Query: 268 VTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEE 327
+TFLSGGQSEE+A++NL+AIN+ PWA+TFSYGRALQAS L AW+G+++N AA E
Sbjct: 2 ITFLSGGQSEEDATINLDAINKYKGKNPWAVTFSYGRALQASVLAAWKGKKENVAAAQAE 181
Query: 328 FIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHAY 363
+ R + N A G+Y G G A QSL++A HAY
Sbjct: 182 LLARGKANSEACVGKYAGGVQGAAGGQSLFVAGHAY 289
>01154
Length = 2463
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = -2
Query: 295 PWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQ 354
PWALTFSYGRALQAS L AW+G + N AA E +KRA+ NG A G+Y G G A +
Sbjct: 2462 PWALTFSYGRALQASVLKAWKGNKANTDAAQGELLKRAKANGEACVGKYAGGVKGTAGGE 2283
Query: 355 SLYIANHAY 363
SL++A HAY
Sbjct: 2282 SLFVAGHAY 2256
>19270
Length = 442
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = -1
Query: 162 LAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVT 206
+ L+N++V + QNG+VPIVEPE+LPDG+HDL+ Q VT
Sbjct: 124 ICALDNSHVCMTFV----QNGLVPIVEPEVLPDGEHDLQTAQKVT 2
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|22203755|ref|NP_666312.1| eukaryotic translation
initiation factor 3, subunit C [Mus musculus]
(911 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08941 334 9e-92
33466 255 6e-68
05453 146 4e-35
00147 42 8e-04
28565 35 0.16
38242 30 4.7
>08941
Length = 1327
Score = 334 bits (857), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 158/216 (73%), Positives = 184/216 (85%)
Frame = +2
Query: 669 VPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQFHHQLRVGERQPLLGPP 728
+P+H+HINLELLECVYLVSAMLLEIPYMAAHE D RRRMISK FHH +++ ERQ L GPP
Sbjct: 152 LPYHMHINLELLECVYLVSAMLLEIPYMAAHELDVRRRMISKNFHHVMKMSERQTLTGPP 331
Query: 729 ESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTMLVRKIQEESLRT 788
ESMREHVVAASKAMK G+W+ C +FIIN+KMN KVWDLF + DKVR ++ KIQEESLRT
Sbjct: 332 ESMREHVVAASKAMKAGNWRACKTFIINDKMNAKVWDLFFQRDKVRDLISSKIQEESLRT 511
Query: 789 YLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPTQTVVMHRTEPT 848
YLF YSSVYDS+S+ L+DMFEL+ P VHSIISKMIINEELMAS+D+PTQ + MHRTEPT
Sbjct: 512 YLFCYSSVYDSLSLPLLADMFELERPVVHSIISKMIINEELMASMDEPTQILSMHRTEPT 691
Query: 849 AQQNLALQLAEKLGSLVENNERVFDHKQGTYGGYFR 884
Q+LALQLAEK+ S VENNER+ + KQG + YF+
Sbjct: 692 RLQSLALQLAEKVASHVENNERIMEVKQGNF--YFQ 793
>33466
Length = 612
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 152/200 (76%)
Frame = -3
Query: 442 ILTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEAQVCAIIERVQRYLEEKGTTEEICQIY 501
ILT++ER+DEEFTK++Q D HS E+V+ LKDE +VC +++ +Q Y+E+ GT EEIC+ Y
Sbjct: 610 ILTVMERLDEEFTKMLQACDAHSTEFVDRLKDEQRVCGLLDTLQAYMEKIGTNEEICRAY 431
Query: 502 LRRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAENEGEDSAVLMERLCKYIYAKDRTDR 561
LRRI H Y+KFD A ++ + +S+ LM++LCKYIYAKD TDR
Sbjct: 430 LRRIEHVYFKFDQTAFDEKVDKTKVTSEQ--------------LMDKLCKYIYAKDCTDR 293
Query: 562 IRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQHADPPVQILYNRTMVQLGICAFRQ 621
+RT AILC IY HALH RW++ARDLMLMSHLQDNIQH+D P QILYNRT+VQLG+CAFRQ
Sbjct: 292 LRTRAILCQIYXHALHDRWFKARDLMLMSHLQDNIQHSDVPTQILYNRTLVQLGLCAFRQ 113
Query: 622 GLTKDAHNALLDIQSSGRAK 641
G +DAHNAL+DIQSS RAK
Sbjct: 112 GHVRDAHNALVDIQSSNRAK 53
>05453
Length = 1135
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 100/160 (62%)
Frame = +2
Query: 1 MSRFFTTXXXXXXXXXXXXXXXVTKPVSGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
MSRFF +P N K LS+DEEDT+RVVRS KDKR+++L
Sbjct: 374 MSRFFQAGSDSETESESEEEVQTQRPAVHN--KAAYQLSDDEEDTRRVVRSEKDKRYDDL 547
Query: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKEGVPRFYIRILADLEDYLNEL 120
N+I+T+RN KI+D+ L +FE L K+Y KAK +VD+EG+PRFY+R L +L D++NE
Sbjct: 548 RNIIKTMRNHKKIKDMASVLTDFEGLCKSYDKAKKVVDREGIPRFYLRCLVELLDFVNEC 727
Query: 121 WEDKEGXXXXXXXXXXXLSTLRQKIRKYNRDFESHITNYK 160
WED+E L+TLRQK+RKY RDFE+ + Y+
Sbjct: 728 WEDREWRDTISKNNARGLTTLRQKLRKYCRDFETDLAKYR 847
>00147
Length = 832
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Frame = -3
Query: 138 LSTLRQKIRKYNRDFESHITNYKQNPEQ 165
L+TLRQK+RKY RDFE+ + Y++NP++
Sbjct: 89 LTTLRQKLRKYCRDFETDLAKYRENPDE 6
>28565
Length = 712
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 138 LSTLRQKIRKYNRDFESHITNYK 160
L+TLRQK+RKY RDFE+ + Y+
Sbjct: 118 LTTLRQKLRKYCRDFETDLAKYR 186
>38242
Length = 414
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +3
Query: 481 IERVQRYLEEKGTTEEICQIYLRRILHTYYKFDYKAHQRQLTPPEGSSKSEQDQAENEGE 540
E++ + + G ++E Q ++ + T A Q EG Q QAE +GE
Sbjct: 93 FEKLSQAADTAGDSQEAQQNFMDTLTQTMAGMTQNADGIQEETLEG-----QGQAEGQGE 257
Query: 541 DSAVLMERLCKYIYAKDR----TDRIRTCAILC 569
+ +M+ L + + +K R T+R R C + C
Sbjct: 258 EFMPMMQELMQTLLSKKRPLPLTERDR-CQVPC 353
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|46559406|ref|NP_796300.1| p21-activated kinase 2 [Mus
musculus]
(524 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
14420 333 9e-92
12721 301 6e-82
13212 175 5e-44
18921 167 8e-42
19094 115 1e-40
00300 143 1e-34
28066 129 4e-30
13592 127 1e-29
14646 114 3e-28
01707 115 5e-26
01060 106 3e-23
14126 104 1e-22
09606 100 2e-21
37602 85 8e-21
03240 95 8e-20
15910 93 2e-19
00392 93 3e-19
01718 92 4e-19
30755 91 9e-19
18484 90 2e-18
31885 83 2e-16
06405 82 5e-16
01756 80 2e-15
04852 78 7e-15
02638 78 8e-15
13066 78 1e-14
29581 77 2e-14
21433 74 2e-13
01392 72 8e-13
04591 71 1e-12
01966 71 1e-12
19761 70 2e-12
27546 70 2e-12
21808 70 2e-12
19301 69 3e-12
11780 69 3e-12
09007 67 1e-11
21079 66 1e-11
00715 67 2e-11
12786 66 4e-11
17975 65 5e-11
26560 65 8e-11
07940 64 1e-10
14116 62 4e-10
25019 62 5e-10
26711 61 9e-10
04138 60 2e-09
27405 59 6e-09
07836 57 1e-08
18663 57 2e-08
21210 56 4e-08
07291 56 4e-08
03508 55 7e-08
29011 55 8e-08
28638 55 1e-07
00486 54 2e-07
12672 53 3e-07
14477 51 1e-06
11185 50 2e-06
17253 50 3e-06
20152 49 4e-06
17300 49 5e-06
32000 49 5e-06
28157 49 5e-06
27274 47 2e-05
16708 46 3e-05
20559 46 5e-05
06358 45 5e-05
32957 45 8e-05
01106 44 1e-04
20640 44 1e-04
32691 44 2e-04
00394 44 2e-04
31789 43 4e-04
36481 41 0.001
07833 41 0.001
26009 40 0.002
18996 40 0.003
29590 39 0.004
31489 39 0.006
18481 38 0.008
17516 38 0.010
16350 37 0.013
20513 37 0.017
18401 35 0.076
14104 33 0.22
23319 33 0.23
11404 33 0.27
03294 33 0.29
17637 32 0.51
21800 31 1.0
37063 31 1.1
13305 31 1.2
31120 30 2.3
22005 30 3.1
01970 28 8.0
28068 28 8.9
>14420
Length = 528
Score = 333 bits (854), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 153/175 (87%), Positives = 167/175 (95%)
Frame = +2
Query: 278 KQINLQKQPKKELIINEILVMKELKNPNIVNFLDSYLVGDELFVVMEYLAGGSLTDVVTE 337
K +NL +QPKKELIINEILVM+E +NPNIVN+LDSYLVG+EL+VVME+LAGGSLTDVVTE
Sbjct: 2 KTMNLSQQPKKELIINEILVMRENQNPNIVNYLDSYLVGEELWVVMEFLAGGSLTDVVTE 181
Query: 338 TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQ 397
TCMDE QIAAVCRECLQALEFLH NQVIHRDIKSDN+LLGM+GSVKLTDFGFCAQ++PEQ
Sbjct: 182 TCMDEGQIAAVCRECLQALEFLHENQVIHRDIKSDNILLGMDGSVKLTDFGFCAQLSPEQ 361
Query: 398 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 452
SKRSTMVGTPYWMAPEVVTRK YGP VDIWSLG+M IEM+EGEPPYLNENPLRAL
Sbjct: 362 SKRSTMVGTPYWMAPEVVTRKQYGPTVDIWSLGVMCIEMIEGEPPYLNENPLRAL 526
>12721
Length = 821
Score = 301 bits (770), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 138/265 (52%), Positives = 196/265 (73%)
Frame = +1
Query: 227 MTDEEIMEKLRTIVSIGDPKKKYTRYEKIGQGASGTVFTATDVALGQEVAIKQINLQKQP 286
++ E+ L+ +V+ GDP+ + KIG+G++G V AT G+++A+K+++L+KQ
Sbjct: 28 LSHEQFRAALQMVVTPGDPRTFLDDFMKIGEGSTGIVCIATSRD-GRQMAVKKMDLRKQQ 204
Query: 287 KKELIINEILVMKELKNPNIVNFLDSYLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIA 346
++EL+ NE++VM++ +PNIV +SYLV DEL+VVME++ GG+LTD+VT MDE QIA
Sbjct: 205 RRELLFNEVVVMRDYHHPNIVEMYNSYLVNDELWVVMEFMEGGALTDIVTNNRMDEVQIA 384
Query: 347 AVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGT 406
VCR CL+AL FLHAN VIHRDIKSD++LL +G VKL DFGFCAQ+T + KR ++VGT
Sbjct: 385 TVCRACLKALAFLHANGVIHRDIKSDSILLSHDGKVKLXDFGFCAQVTQDLQKRKSLVGT 564
Query: 407 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP 466
PYWMAPEV++R YGP+VDIWSLGIM +EM++ EPP+ NE PL+A+ I P+L+N
Sbjct: 565 PYWMAPEVISRLPYGPEVDIWSLGIMVMEMIDAEPPFFNEPPLQAMRRIRDMPPPKLRNT 744
Query: 467 EKLSPIFRDFLNRCLEMDVEKRGSA 491
K+SP + F++R L D +R +A
Sbjct: 745 HKISPRLQGFIDRMLVRDPHQRATA 819
>13212
Length = 1067
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 124/205 (60%), Gaps = 9/205 (4%)
Frame = -1
Query: 322 VMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGME 379
V L G+L ++ E M EAQI VC E AL+FLH + VIHRDIK+ NVLL ++
Sbjct: 1049 VFRVLWWGALDSIMVDLEKPMTEAQICYVCHEMCMALDFLHRHHVIHRDIKAGNVLLTID 870
Query: 380 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-----YGPKVDIWSLGIMAI 434
G VKL DFG A+ T Q KR T +GTPYWMAPEVV + Y K DIWSLG+ I
Sbjct: 869 GEVKLADFGVSAKNTQTQQKRDTFIGTPYWMAPEVVLCETLKDTPYDFKADIWSLGVTLI 690
Query: 435 EMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKEL 494
E + EPP +P+R L I + P L+ P+K + +F+DF+ +CL D R +A EL
Sbjct: 689 EFAQIEPPNKEMHPMRVLIKIHKSDPPTLEKPKKWTKLFKDFIAKCLVKDPNLRPTAAEL 510
Query: 495 LQHPFLKLAKPL--SSLTPLILAAK 517
L+HPF+K A +++ LI+ +K
Sbjct: 509 LEHPFMKRATATDKAAICDLIMESK 435
>18921
Length = 697
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 124/198 (62%), Gaps = 2/198 (1%)
Frame = +2
Query: 254 KIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSY 313
K+G+G+ G+VF + GQ +AIKQ+ + ++ II EI +M++ + IV + SY
Sbjct: 50 KLGEGSYGSVFKSLHKETGQVLAIKQVPVDTDLQE--IIKEISIMQQCDSKYIVKYYGSY 223
Query: 314 LVGDELFVVMEYLAGGSLTDV--VTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKS 371
+L++VMEY GS++D+ + + E +IA + L+ L +LH+ + IHRDIK+
Sbjct: 224 FKNTDLWIVMEYCGAGSVSDIMRLRNKTLVEREIATILYYTLKGLXYLHSRRKIHRDIKA 403
Query: 372 DNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 431
N+LL EG KL DFG Q+T +KR+T++GTPYWMAPEV+ Y DIWSLGI
Sbjct: 404 GNILLNNEGHAKLADFGVAGQLTDTMAKRNTVIGTPYWMAPEVIQEIGYDCVADIWSLGI 583
Query: 432 MAIEMVEGEPPYLNENPL 449
A+EM EG+PP + + L
Sbjct: 584 TALEMAEGKPPVMETSIL 637
>19094
Length = 898
Score = 115 bits (289), Expect(2) = 1e-40, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Frame = +1
Query: 329 GSLTDV--VTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTD 386
GS++D+ + + E +IA + L+ L +LH+ + IHRDIK+ N+LL EG KL D
Sbjct: 10 GSVSDIMRLRNKTLVEREIATILYYTLKGL*YLHSRRKIHRDIKAGNILLNNEGHAKLAD 189
Query: 387 FGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG 439
FG Q+T +KR+T++GTPYWMAPEV+ Y DIWSLGI A+EM EG
Sbjct: 190 FGVAGQLTDTMAKRNTVIGTPYWMAPEVIQEIGYDCVADIWSLGITALEMAEG 348
Score = 69.3 bits (168), Expect(2) = 1e-40, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +3
Query: 439 GEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP 498
G+PPY + +P+RA+++I T P + P+K S F DF+++CL + E R +A +LLQH
Sbjct: 345 GKPPYGDIHPMRAIFMIPTKPPPSFRQPDKWSTEFIDFVSKCLVKNPENRATAVDLLQHD 524
Query: 499 FLKLAKPLSSLTPLILAAKE 518
F+K A+ L +I AKE
Sbjct: 525 FIKKAEACEILQAMIREAKE 584
>00300
Length = 2318
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 143/264 (54%), Gaps = 9/264 (3%)
Frame = -1
Query: 248 KYTRYEKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKEL--IINEILVMKELKNPN 305
++ R KIG+G G V+TA +++ G+ +A+K++ Q ++L + +EI + + +++ N
Sbjct: 1655 RWQRGNKIGEGQFGKVYTAVNMSTGELMALKEMKFQPNDLQQLREMCDEIKIFEGIQHEN 1476
Query: 306 IVNFLDSYLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVI 365
+V + + DE+ + MEY G++ + + + E I RE + A+ LH N ++
Sbjct: 1475 LVKYYGVEVHKDEMLMFMEYCDTGTIEEAA-KMGLPEYLIRRYTREIVLAVNHLHENSIV 1299
Query: 366 HRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEVVTRK---A 419
HRDIK N+ L G VKL DFG ++ + + +VGT +MAPEV T+
Sbjct: 1298 HRDIKGANIFLTSNGHVKLGDFGCSVKLKSHTTMPGEFHNLVGTTAYMAPEVFTQNDQGG 1119
Query: 420 YGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSPIFRDFLN 478
YG DIWSLG + IEM G+ P+ + +N + +Y + P + P+ LS + FL+
Sbjct: 1118 YGRAADIWSLGCVVIEMATGKRPWHDLDNNYQIMYKVGIGHKPAV--PDSLSVEGKHFLD 945
Query: 479 RCLEMDVEKRGSAKELLQHPFLKL 502
+ D +R A +LL H F K+
Sbjct: 944 LIMCHDPAQRALASQLLDHTFTKV 873
>28066
Length = 837
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 88/139 (63%), Gaps = 11/139 (7%)
Frame = +2
Query: 71 RPEISPPSDFEHTIHVGFDAVTGEFTGMPEQWARLLQTSNITKLEQKKNPQAVLDVLKFY 130
+P ISPPS+FEHT+HVGFD +TGEFTGMPE WARLLQ++NI+K+EQK+NPQAVLDVL +Y
Sbjct: 371 KPVISPPSNFEHTVHVGFDPLTGEFTGMPESWARLLQSANISKMEQKQNPQAVLDVLNYY 550
Query: 131 DSNTVKQ---KYL-----SFTPPEKDGFPSGTPAL---NTKGSETSAVVTXXXXXXXXAA 179
D+++ ++ KY+ S K AL N E +AV
Sbjct: 551 DTSSKERRESKYMINIKPSSANSSKSNLSEKLSALVIINQNKPEQNAVAALGDGDNNEEP 730
Query: 180 PPVIAPRPDHTKSIYTRSV 198
P IA RPD TKSIYT+ +
Sbjct: 731 RPSIAARPDKTKSIYTKPI 787
>13592
Length = 980
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 143/263 (54%), Gaps = 12/263 (4%)
Frame = +2
Query: 254 KIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKEL--IINEILVMKELKNPNIVNFLD 311
KIGQG G V+TA + G+ +A+K+I +Q + L + E+ +++ +K+ N+V +
Sbjct: 5 KIGQGRFGKVYTAVNNNTGELMAMKEIAIQPGETRALKNVAEELKILEGIKHKNLVRYYG 184
Query: 312 SYLVGDELFVVMEYLAGGSLTDVVTETC-MDEAQIAAVCRECLQALEFLHANQVIHRDIK 370
+ +EL + ME + G+L +V T + EA + L + LH + ++HRDIK
Sbjct: 185 IEVHREELLIFMELCSEGTLESLVELTGGLPEALSRRFTAQLLSGVAELHKHGIVHRDIK 364
Query: 371 SDNVLLGMEGS--VKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEVVTR---KAYGP 422
+ N+ L ++GS +KL DFG +I + + VGT +MAPEV T+ +G
Sbjct: 365 TANIFL-VDGSNSLKLGDFGSAVKIQAHTTVPGELQGYVGTQAYMAPEVFTKTNSDGHGR 541
Query: 423 KVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCL 481
DIWS+G + +EM G+ P+ ++ + ++ + P Q PE LS DF++ CL
Sbjct: 542 LADIWSVGCVVVEMASGKRPWAQFDSNFQIMFKVGMGEKP--QAPESLSQEGHDFIDHCL 715
Query: 482 EMDVEKRGSAKELLQHPFLKLAK 504
+ D ++R SA ELL+ F K +
Sbjct: 716 QHDPKQRLSAIELLEQNFCKSGR 784
>14646
Length = 623
Score = 114 bits (286), Expect(2) = 3e-28, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 85/141 (60%), Gaps = 15/141 (10%)
Frame = +2
Query: 71 RPEISPPSDFEHTIHVGFDAVTGEFTGMPEQWARLLQTSNITKLEQKKNPQAVLDVLKFY 130
+P ISPPS+FEHT+HVGFD TGEFTGMPE WA LLQ++NI+K EQK+NPQAVLDVL +Y
Sbjct: 143 KPVISPPSNFEHTVHVGFDPHTGEFTGMPESWANLLQSANISKTEQKQNPQAVLDVLNYY 322
Query: 131 DSNTVKQ---KYLSFTPP-----EKDGFPSGTPAL------NTKGSETSAVVTXXXXXXX 176
D+++ ++ KY++ P K A+ N +T
Sbjct: 323 DTSSKERRGSKYMTNIKPSSGNSSKSNLSDKVSAMLVLSQQNKSEQQTLLGAGXGEGGRR 502
Query: 177 XAAPPV-IAPRPDHTKSIYTR 196
+P IA RPD TKSIYT+
Sbjct: 503 MKSPHSPIATRPDKTKSIYTK 565
Score = 28.9 bits (63), Expect(2) = 3e-28, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +3
Query: 12 PAPPVRMSSTIFSTGGKDPLSANHSLKPLPSVPEEKK 48
PAPPVR+ S ST LS + KPLP PEEKK
Sbjct: 3 PAPPVRLESKREST-----LSQEY--KPLPREPEEKK 92
>01707
Length = 757
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 119/216 (55%), Gaps = 4/216 (1%)
Frame = +1
Query: 244 DPKKKYTRYEKIGQGASGTVFTATDVALGQEVAIKQ-INLQKQPK-KELIINEILVMKEL 301
D +KY + KIG+G+ G VF + Q VAIK+ + + P K++ + EI ++K+L
Sbjct: 55 DRMEKYEKIGKIGEGSYGVVFKCRNKETSQLVAIKKFVESEDDPLIKKIAMREIRMLKQL 234
Query: 302 KNPNIVNFLDSYLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLH 360
K+PN+V ++ + L +V +Y+ L ++ + E + + + L A+ F H
Sbjct: 235 KHPNLVRLIEVFRRKKRLHLVFDYVDHTLLNELDRYPRGLPEPMVKRIIYQTLLAVNFCH 414
Query: 361 ANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTRKA 419
IHRD+K +N+L+ +G VKL DFGF +T + + V T ++ APE +V
Sbjct: 415 QYNTIHRDVKPENILITRQGQVKLCDFGFARILTGPGDEYTDYVATRWYRAPELLVGDTQ 594
Query: 420 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 455
YGP VD+W++G + E++ G+ + + + L+LI
Sbjct: 595 YGPPVDVWAIGCVFAELLTGQALWPGRSDVDQLHLI 702
>01060
Length = 1800
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 32/283 (11%)
Frame = +1
Query: 250 TRYEKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKK--ELIINEILVMKELKNPNIV 307
T ++KIG+G G V+ A G+++A+K+I L+ I EI +++EL++ NIV
Sbjct: 82 TDFQKIGEGTYGVVYKCRHRATGRKLAMKKIRLRGSEDGVPSSAIREIAMLRELRHTNIV 261
Query: 308 NFLDSYLVGDELFVVMEYLAGG--SLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQV 364
D + + LF+V E+L+ D E +D + + + + + F H ++
Sbjct: 262 CLEDVIMEDERLFLVFEFLSMDLKMYIDKFPEGVVLDRRLVKSYVFQIVTGIXFCHQRRI 441
Query: 365 IHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPK 423
+HRD+K N+L+ G++K+ DFG + V T ++ APE++ + Y
Sbjct: 442 VHRDLKPQNLLINHTGAIKIADFGMARTFALPVRAYTHEVVTLWYRAPEILMGASKYSTP 621
Query: 424 VDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-------------------ATNGTPELQ 464
VD+WS+G + +M+ P + ++ + L+ I A NG L
Sbjct: 622 VDVWSIGTIFADMLIRTPIFKGDSEIDQLFKIFRIIGTPTEQTWPEFHKLPAFNGMFPLW 801
Query: 465 NPEKLSPIFR-------DFLNRCLEMDVEKRGSAKELLQHPFL 500
KLS D + R L+ D +R S K++LQH +
Sbjct: 802 KEGKLSETLTDLDSLGLDLIERTLKCDPAQRISCKKMLQHAYF 930
>14126
Length = 1265
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 147/296 (49%), Gaps = 40/296 (13%)
Frame = +3
Query: 246 KKKYTRYEKIGQGASGTVFTATDVA-LGQEVAIKQINLQKQPKKE--LIINEILVMKELK 302
++KY IG GA GTV+ A D+ G+ VA+K+I L + + I EI ++K+L+
Sbjct: 186 EQKYEEVAVIGNGAYGTVYKARDLRNQGEFVAMKRIRLNNTEEGMPMMAIREISMLKQLE 365
Query: 303 ---NPNIVNFLD--SYLVGDE---LFVVMEYLAGGSLTDVVTETC----MDEAQIAAVCR 350
+PN+V LD + D L +V EY+ T + C + +I +
Sbjct: 366 QYEHPNVVRLLDVSHNTITDREIRLNLVFEYIEHDLATYLAK--CPSPGLGPDRIKDLML 539
Query: 351 ECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 410
+ L ++FLH+N+++HRD+K N+L+ +G +KL DFG A+I +T+V T ++
Sbjct: 540 QLLNGVDFLHSNRIVHRDLKPQNLLISKDGRLKLADFGL-ARIYSFHMALTTVVVTLWYR 716
Query: 411 APEVVTRKAYGPKVDIWSLGIMAIEM---------------------VEGEPPYLNENPL 449
+PEV+ + YG VDIWS G + E+ V G PP +
Sbjct: 717 SPEVLMQAEYGTSVDIWSCGCIFAELFTRRALFKGSSEFDQLKKIFEVIGLPPAGDWPEG 896
Query: 450 RALYLIATNGTP--ELQN--PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 501
+++ + TP LQ PE + P +D + + L +R S++E L HP+L+
Sbjct: 897 VSVHRNSFRPTPPVPLQTLVPE-MDPQAKDLMEKMLVFKSGRRISSRESLLHPYLR 1061
>09606
Length = 1300
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 33/305 (10%)
Frame = -3
Query: 247 KKYTRYEKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI 306
+ + YE++G+G ++ VAI I K+P+ + N + + ++ +PN+
Sbjct: 1115 ENFVLYEELGKGEHSIIYKGRRKGTINFVAIHCIEKCKRPE---VTNTVRMTHDISHPNV 945
Query: 307 VNFLDSYLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVI 365
V F + Y + L++V+E GGSL D++ + + E I + L ++H+ ++
Sbjct: 944 VQFHEWYETSNHLWLVVELCTGGSLADILAQDHHLPETSIRDFGIHLVTGLHYIHSLGIL 765
Query: 366 HRDIKSDNVLLGMEGSVKLTDFGFCA----------------------QITPEQSKRSTM 403
D++ VLL G +K DFG Q E K+
Sbjct: 764 FHDLRPSKVLLDTSGVLKFADFGLSKVEGENLEELFFKFAEAGDQWNIQSAEEMMKQVPT 585
Query: 404 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL 463
G+P +MAPEV D+W+LG + EM G PP+L E Y I +
Sbjct: 584 SGSPTYMAPEVFQGAEPSIMSDLWALGCVFYEMFSGHPPFLGET-----YDITKDKVLNK 420
Query: 464 QNP----------EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLI 513
+ P K SP F + L L+ D +R S L++H F + LSSL
Sbjct: 419 EFPLPKVKGSRLSAKPSPEFLNLLESLLQKDSTRRLSWASLVKHAFWQ--GGLSSLVKEF 246
Query: 514 LAAKE 518
++E
Sbjct: 245 TMSEE 231
>37602
Length = 804
Score = 85.1 bits (209), Expect(3) = 8e-21, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = -1
Query: 306 IVNFLDSYLVGDELFVVMEYLAGGSLTDVVTETC-MDEAQIAAVCRECLQALEFLHANQV 364
V + DSYL ++L++ MEY GGS+ D+ T + E QIA VCRE L+ L +LH
Sbjct: 333 FVGYFDSYLRREKLWIAMEYCGGGSMQDIYHVTGPLTEPQIAFVCRETLKGLHYLHRRGK 154
Query: 365 IHRDIKSDNVLLGMEGSVKLTDF 387
+HRDIK N+LL EG VKL DF
Sbjct: 153 MHRDIKGANILLTEEGDVKLADF 85
Score = 28.1 bits (61), Expect(3) = 8e-21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 379 EGSVKLTDFGFCAQITPEQSKRSTMVGTP 407
+G+ FG AQIT KR + +GTP
Sbjct: 110 KGTSSWRTFGVSAQITATMCKRKSFIGTP 24
Score = 25.4 bits (54), Expect(3) = 8e-21, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 276 AIKQINLQKQPKKELIINEILVMKELKNPNIV 307
A K I L+ +I EIL+MK+ K+PNI
Sbjct: 424 AFKVIKLEPGDDFAIIQQEILMMKDCKHPNIC 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -1
Query: 386 DFGFCAQITPEQSKRSTMVGTPYWMAPE 413
DFG AQIT KR + +GTPYWMA +
Sbjct: 744 DFGVSAQITATMCKRKSFIGTPYWMARK 661
>03240
Length = 1683
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 52/256 (20%)
Frame = -3
Query: 252 YEKI---GQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIIN---EILVMKELKNPN 305
+EKI G GA G V G A+K + K+ + + E ++ E N
Sbjct: 1285 FEKIKTLGVGAFGEVSLCRKNDTGMLYAMKTLRKSDVLKRNQVAHVKAERDILAEADNEW 1106
Query: 306 IVNFLDSYLVGDELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQV 364
+V S+ + L+ VM+Y+ GG L ++ +DE E +QA+E +H
Sbjct: 1105 VVKLYYSFQDHNYLYFVMDYVPGGDLMGLLIRMEILDEPLARFYVAELVQAIESVHRMGF 926
Query: 365 IHRDIKSDNVLLGMEGSVKLTDFGFCAQ-------------------------------- 392
IHRDIK DN+L+ G +KLTDFG C
Sbjct: 925 IHRDIKPDNILIDRNGHIKLTDFGLCTGFRWTHNSKYYQRDGTHARQDSMEVKCQLDEQC 746
Query: 393 ----ITPEQSKR--------STMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEG 439
+ P + +R ++VGTP ++APEV++R Y D WS+G++ EM+ G
Sbjct: 745 QCEILKPLERRRKREQRCLAHSLVGTPNYIAPEVLSRLGGYTSVCDWWSVGVILFEMLVG 566
Query: 440 EPPYLNENPLRALYLI 455
PP+ P Y +
Sbjct: 565 HPPFYANTPAETQYKV 518
>15910
Length = 1361
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Frame = +2
Query: 334 VVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVL---LGMEGSVKLTDFGFC 390
+VT E A + L ++++HAN V+HRD+K +N+L + + +KL DFG
Sbjct: 437 IVTRGQYTEKDAARAISDILHGVQYIHANGVVHRDLKPENLLYECMTDDSKLKLADFGLS 616
Query: 391 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 450
I PE + ST+ GTP + APEV+ Y P VD+WS+G++A ++ G P+ EN
Sbjct: 617 RIIEPE-VQMSTVCGTPGYCAPEVLKGDKYTPSVDMWSVGVIAYILLCGYEPFFAENEFE 793
Query: 451 ALYLIATNGTPEL--QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 501
+Y G + + ++S +D + + L +D +KR +A E L+ P++K
Sbjct: 794 -MYRKIIKGEYKFDEEYWSEISENAKDVVRKLLVIDPKKRLTATEALRLPWVK 949
>00392
Length = 668
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Frame = +3
Query: 297 VMKELKNPNIVNFLDSYLVGDE-----LFVVMEYLAGGSLTDVVTETCMDEAQIAA-VCR 350
++KEL++PNIV F D + + + +V E + G+L + +I CR
Sbjct: 90 MLKELQHPNIVRFFDYWEEHNHRNRKVIILVTELMTSGTLKTYLKRFKKPNVKILKNWCR 269
Query: 351 ECLQALEFLHANQ--VIHRDIKSDNVLL-GMEGSVKLTDFGFCAQITPEQSKRSTMVGTP 407
+ L+ L FLH VIHRD+K DN+ + G GSVK+ D G QS +++GTP
Sbjct: 270 QVLKGLYFLHTRTPPVIHRDLKCDNIFITGPTGSVKIGDLGLAT--LKNQSFAKSVIGTP 443
Query: 408 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNP 466
+MAPE+ + Y VD+++ G+ +EM E PY + +Y T+G PE +
Sbjct: 444 EFMAPEMY-EEHYDEAVDVYAFGMCMLEMASSEYPYSECSNAAQIYKRVTSGVLPEALDK 620
Query: 467 EKLSPIFRDFLNRCL 481
++ I RD ++ C+
Sbjct: 621 VAITEI-RDIIHHCI 662
>01718
Length = 959
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 12/256 (4%)
Frame = +3
Query: 253 EKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDS 312
EKIG G VF T GQ +A+K + + ++ E+ ++ L++ NI+ F+
Sbjct: 165 EKIGAGFFSEVFKVTHRITGQVMALKMNTMTS--NRHNMLREVQLLNRLQHANILRFMGV 338
Query: 313 YLVGDELFVVMEYLAGGSLTDVVTETCMDE----AQIAAVCRECLQALEFLHANQVIHRD 368
+ +L + EY+ G+L ++ + DE Q + + L++LH+ + IHRD
Sbjct: 339 CVHEGQLHALTEYIPSGNLEQLLEKK--DEELPWTQRIQLTLGLARGLDYLHSTRFIHRD 512
Query: 369 IKSDNVLLGMEGS----VKLTDFGFCAQI-TPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 423
+ S N+L+ E + + DFG +I P ++ VG+PYWMAPEV+ Y +
Sbjct: 513 LTSKNILIRREDNHGYHAVIADFGLATKIPDPLDKEKLPTVGSPYWMAPEVLNGHFYNER 692
Query: 424 VDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLN---RC 480
D++S+GI+ E+ P + P + G + E +S D+L +C
Sbjct: 693 ADLFSVGIIMCEITARIPADPDIMP-----RMNNFGVDYVALSEMISYCPLDYLQLAFKC 857
Query: 481 LEMDVEKRGSAKELLQ 496
++D +KR E+++
Sbjct: 858 CQVDPQKRPRGVEIIE 905
>30755
Length = 1137
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Frame = +2
Query: 337 ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPE 396
E E + E + AL +LH+ +I+RD+K +N+LL +G +K+ DFG C +
Sbjct: 14 ERIFTEERTRFYGAEIISALGYLHSQGIIYRDLKLENLLLDKDGHIKVADFGLCKEDITY 193
Query: 397 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA 456
T GTP ++APEV+ YG VD W G++ EM+ G P+ N + LI
Sbjct: 194 GRTTKTFCGTPEYLAPEVLDDNDYGRAVDWWGTGVVMYEMICGRLPFYNRDHDVLFTLIL 373
Query: 457 TNGTPELQNPEKLSPIFRDFLNRCLEMDVEKR-----GSAKELLQHPFL 500
+++ P ++ + L+ L D R KE+ HPF
Sbjct: 374 VE---DVKFPRNITDEAKSLLSGLLAKDPRNRLGGGQDDVKEIQAHPFF 511
>18484
Length = 635
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%)
Frame = +1
Query: 346 AAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVG 405
A E L FLH +I+RD+K DNV+L EG +K+ DFG C + + T G
Sbjct: 52 AFYAAEIAVGLFFLHDQGIIYRDLKLDNVMLDSEGHIKIADFGMCKEGMTGDATTRTFCG 231
Query: 406 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 447
TP ++APE+V + Y VD W+ G++ EM+ G+PP+ E+
Sbjct: 232 TPDYIAPEIVLYQPYSKSVDWWAYGVLLFEMLAGQPPFDGED 357
>31885
Length = 529
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Frame = -2
Query: 297 VMKELKNPNIVNFLDSYLVGDELFVVMEYLAGGSL-TDVVTETCMDEAQIAAVCRECLQA 355
++ L +P +VN ++ ++LF+V++ GG L + E E + +
Sbjct: 513 MLTRLDHPFLVNLWYAFQDEEDLFMVVDLFLGGDLRYHMQQEVSFREDCVKFYLCQLALV 334
Query: 356 LEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 415
L++L + +++HRDIK DN+LL +G +TDF Q+ ++ ST PY MAPEV
Sbjct: 333 LDYLRSQKIVHRDIKPDNILLDEQGHCHVTDFNIATQLEDDELATSTSGTRPY-MAPEVY 157
Query: 416 -----TRKAYGPKVDIWSLGIMAIEMVEGEPPY 443
R+ YG VD WSLG+ E+++ P+
Sbjct: 156 GVAINERRGYGFPVDWWSLGVSLFELLKKRRPF 58
>06405
Length = 1965
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 10/259 (3%)
Frame = +1
Query: 253 EKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDS 312
++G G G V+ A + VA+K + + + E +MKE+K+PN+V L
Sbjct: 277 HRLGGGQYGDVYEAMWKRYNKIVAVKTLKEDTMALNDFL-EEAAIMKEMKHPNLVQLLGV 453
Query: 313 YLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQ---ALEFLHANQVIHRDI 369
++V E++ G+L D + + +E A+ Q + +L IHRD+
Sbjct: 454 CTREPPFYIVTEFMPHGNLLDYLRSSTREENGPTALMYMATQIASGMAYLETKNFIHRDL 633
Query: 370 KSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPY---WMAPEVVTRKAYGPKVDI 426
+ N L+ VK+ DFG + + + +G + W APE + + + DI
Sbjct: 634 AARNCLVADSNMVKVADFGLARLM--KDDTYTAHIGAKFPIKWTAPEGLAFNRFSTRSDI 807
Query: 427 WSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDV 485
W+ G++ E+ G PY L +Y + G ++ P + +C + D
Sbjct: 808 WAFGVLLWELATYGMSPYPGVE-LTEVYHLLERGY-RMERPPGTPADVYILMLKCWQWDP 981
Query: 486 EKRGSAKE---LLQHPFLK 501
+ R + KE LL++ F K
Sbjct: 982 KDRPTFKEIHFLLENMFEK 1038
>01756
Length = 1858
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Frame = -3
Query: 244 DPKKKYTRYEKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELI--INEILVMKEL 301
D KY + KIGQG G VF A Q VA+K++ + + + I + EI +++ L
Sbjct: 1751 DEDAKYEKLAKIGQGTFGEVFKARCKKTKQVVAMKKVLMDNEKEGFPITALREIKILQLL 1572
Query: 302 KNPNIVNFLD---------------SYLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIA 346
+ N+V+ ++ YLV F E+ G L+++ + +I
Sbjct: 1571 NHENVVDLIEICSTKATSANRYKSMFYLV----FEFCEHDLAGLLSNM--SVVFNLPEIK 1410
Query: 347 AVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCA--QITPEQSKRST-M 403
V ++ + L ++H N+++HRD+K+ N+L+ +G +KL DFG + Q R T
Sbjct: 1409 EVMKQLMNGLYYIHRNKILHRDMKAANILITKQGVLKLADFGLARAFSVNLRQPNRYTNR 1230
Query: 404 VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEP 441
V T ++ PE++ + Y +D W G + EM P
Sbjct: 1229 VVTLWYRPPELLLGDRNYSTAIDQWGAGCIMAEMWTRNP 1113
>04852
Length = 1462
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 33/256 (12%)
Frame = +1
Query: 275 VAIKQI-NLQKQPKKELIINEILVMKELK----NPNIVNFLDSYLVGDELFVVMEYLAGG 329
VA+K + ++ +++ + E+ VMK +K + NIVNFL G L+V++E+ G
Sbjct: 28 VAVKMLRDIVTAVEEQDFVQELQVMKAVKKMGSHINIVNFLGCCTQGGPLWVIVEFAKNG 207
Query: 330 SLTDVVTETCMD---------------------------EAQIAAVCRECLQALEFLHAN 362
+L D + E+C D + + + + +EFL +
Sbjct: 208 NLRDFL-ESCRDGINGYGKFVSPQDPGWYTKTPGGHVIRRKNLLSYAFQIARGMEFLASR 384
Query: 363 QVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 422
+ IHRD+ + NVL+ E +K+ DFG ++ KRS WMAPE + Y
Sbjct: 385 KCIHRDLAARNVLVTEEHVLKIADFGL-SRTGDYYKKRSGGRLPVKWMAPEALFDMRYTT 561
Query: 423 KVDIWSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCL 481
K D+WS G++ E+ G PY + P LY + + PE S + RC
Sbjct: 562 KSDVWSFGVVLWEIFSLGGMPYAS-IPNEELYSKLLDDAYRMPRPELASGNLYAIMERCW 738
Query: 482 EMDVEKRGSAKELLQH 497
R +L+ H
Sbjct: 739 LNRPSDRPEFSQLVGH 786
>02638
Length = 1490
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Frame = +1
Query: 400 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE---NPLRALYLIA 456
+ ++GT +MAPEV+ ++YG D+WS+G + IEM PP+ + N L ++ IA
Sbjct: 7 QGQLLGTIAFMAPEVLRGESYGRACDVWSVGCVMIEMCTCRPPWNSHDISNHLALIFKIA 186
Query: 457 TNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 500
++ P PE +SP RD + RCLE D + R SAK+LL HP
Sbjct: 187 SSVDPP-PIPENMSPPVRDLMLRCLEQDSDFRPSAKDLLMHPLF 315
>13066
Length = 551
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Frame = +3
Query: 274 EVAIKQINLQKQPK---KELIINEILVMKELKNPNIVNFLDSYLVGDELFVVMEYLAGGS 330
++A K I+ +K P ++ E+ ++ +L +P I+ + F+ M + G
Sbjct: 57 KLACKIIDKEKAPVDFVEKFFPRELDLLTKLDHPYIIQIHSILQRXPKNFIFMRFAERGD 236
Query: 331 LTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGF 389
L + E + E Q + AL +LH+ V HRD+K +N+LL +VKL DFGF
Sbjct: 237 LLTYIQEVGFVKEKQAKIWFYQMTTALNYLHSYDVAHRDLKCENILLSSHFNVKLADFGF 416
Query: 390 -CAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKV-DIWSLG 430
CA IT E+ T G+ + APE+V Y PKV D WSLG
Sbjct: 417 ACACITESGEKYMSRTYCGSAAYAAPEIVYGAPYAPKVADAWSLG 551
>29581
Length = 1278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 7/168 (4%)
Frame = -2
Query: 301 LKNPNIVNFLDSYLVG---DELFVVMEYLAG--GSLTDVVTETCMDEAQIAAVCRECLQA 355
L++ NIV L +VG D LF+VMEY SL D + E+Q+ + + L+
Sbjct: 1184 LRHQNIVQ-LQEVVVGKSLDSLFLVMEYCEQDLASLLDNMPAP-FSESQVKCIVLQLLKG 1011
Query: 356 LEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 415
L +LH +IHRD+K N+L+ +G VK+ DFG Q + V T ++ APE++
Sbjct: 1010 LRYLHEAFIIHRDLKVSNLLMTDKGCVKIADFGLARNYGKPQKPMTPKVVTLWYRAPELL 831
Query: 416 -TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-TNGTP 461
K + +D+WS G + E++ +P + L+ + LI GTP
Sbjct: 830 FGSKTHSTAIDMWSAGCILGELLGHKPLMPGRSDLQQIELIMELLGTP 687
>21433
Length = 590
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%)
Frame = +2
Query: 354 QALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 413
ALE+ H +VIHRDIK +N+LLG++G +K+ DFG+ + S+R+TM GT ++ PE
Sbjct: 200 SALEYCHYRKVIHRDIKPENLLLGLKGDLKIADFGW--SVHAPSSRRTTMCGTLDYLPPE 373
Query: 414 VVTRKAYGPKVDIWSLGIMAIEMVEGEPP 442
+V K + VD+WSLG++ E + G PP
Sbjct: 374 MVEGKTHDENVDLWSLGVLCYEFLVGTPP 460
>01392
Length = 1806
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 30/210 (14%)
Frame = -1
Query: 342 EAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGS---VKLTDFGFCAQITPEQS 398
E + + V R +AL+FLH+ + HRD+K +N+L VK+ DF + I+ +
Sbjct: 1794 EREASLVVRHIARALDFLHSKGIAHRDLKPENILCEHLDDVVPVKICDFDLASGISCDGD 1615
Query: 399 KRS-----TMVGTPYWMAPEVVTRK-----AYGPKVDIWSLGIMAIEMVEGEPPYLNE-- 446
T VG+ +MAPEVV +Y + D+WSLGI+ M+ G PP+ +
Sbjct: 1614 GTKTPELLTPVGSAEYMAPEVVDAWVGDSFSYDKRCDLWSLGIILYIMLCGYPPFYGQCG 1435
Query: 447 ------------NPLRALYLIATNGTPEL--QNPEKLSPIFRDFLNRCLEMDVEKRGSAK 492
+ L+ +G + Q +S +D + L + KR SA
Sbjct: 1434 EDCGWNRGEACHDCQDMLFNSIQDGHYKFPSQEWTSISSSAKDLIRHLLVREPRKRYSAA 1255
Query: 493 ELLQHPFLKLAKPLSSL-TPLILAAKEAMK 521
++L+HP++ + L TP +L +MK
Sbjct: 1254 DVLKHPWICTPPAATQLATPHVLTRNNSMK 1165
>04591
Length = 1117
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Frame = -2
Query: 292 INEILVMKELKNPNIVNFLD---------------SYLVGDELFVVMEYLAGGSLTDVVT 336
+ EI ++++L++ N+V + YL+ F +Y G L ++
Sbjct: 1077 LREIKILQQLEHENVVQLQEICHTQAGPYNRYKSTFYLI----FEYCDYDLAGLLNNLRV 910
Query: 337 ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPE 396
+ + A + + L L ++H Q++HRDIK+ N+LL +G +KL DFG
Sbjct: 909 KFSL--ADKKNLMSQLLNGLFYIHTKQILHRDIKAANILLTRDGVLKLADFGLSRPWV-- 742
Query: 397 QSKRST-MVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEP 441
+SKR T V T ++ PE++ + YGP++D+W +G + EM +P
Sbjct: 741 KSKRLTNRVVTLWYRPPELLLGEREYGPEIDMWGVGCIMAEMWSRKP 601
>01966
Length = 1735
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 7/235 (2%)
Frame = -1
Query: 270 ALGQEVAIKQINLQKQPKK--ELIINEILVMKELKNPNIVNFLDSYLVGDELFVVMEYLA 327
A G+++A+K+I L+ I EI +++EL++ NIV D + + LF+V E+L+
Sbjct: 1642 ATGRKLAMKKIRLRGSEDGVPSSAIREIAMLRELRHTNIVCLEDVIMEDERLFLVFEFLS 1463
Query: 328 GG--SLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKL 384
D E +D + + + + + F H +++HRD+K N+L+ G++K+
Sbjct: 1462 MDLKMYIDKFPEGVVLDRRLVKSYVFQIVTGINFCHQRRIVHRDLKPQNLLINHTGAIKI 1283
Query: 385 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD--IWSLGIMAIEMVEGEPP 442
DFG + V T ++ APE++ GP+ W+ G + E P
Sbjct: 1282 ADFGMARTFALPVRAYTHEVVTLWYRAPEILM----GPQSTPPXWTCGAL-----EPSSP 1130
Query: 443 YLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 497
+ PL ++ TP+L + + S L + +RG + QH
Sbjct: 1129 ICSSGPL------SSRATPKLTSFLRYSG--------SLALQRNRRGPSFTSCQH 1007
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 26/107 (24%)
Frame = -3
Query: 420 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-------------------ATNGT 460
Y VD+WS+G + +M+ P + ++ + L+ I A NG
Sbjct: 1175 YSTPVDVWSIGTIFADMLIRTPIFKGDSEIDQLFKIFRIIGTPTEQTWPEFHKLPAFNGM 996
Query: 461 PELQNPEKLSPIFR-------DFLNRCLEMDVEKRGSAKELLQHPFL 500
L KLS D + R L+ D +R S K++LQH +
Sbjct: 995 FPLWKEGKLSETLTDLDSLGLDLIERTLKCDPAQRISCKKMLQHAYF 855
>19761
Length = 473
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Frame = -3
Query: 342 EAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSK 399
E I + AL ++H + ++HRD+K N+ + +G V+L D G ++T
Sbjct: 426 ERLIVCWLMQTASALNYMHTHTPVILHRDLKPQNIYVTEKGDVRLGDLGLARKLTGPADF 247
Query: 400 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIATN 458
++ VGT +++PE+++++ Y K DIWSLG + ++ + + + ++ L+
Sbjct: 246 ATSQVGTIMYLSPEILSQQPYNSKSDIWSLGCVFYDITGKK----GSDEMGVMFLLVQVM 79
Query: 459 GTPELQNPEKLSPIFRDFLNRCLEMD 484
G +L P+ S FRD ++R L D
Sbjct: 78 GGRKLPLPDHYSQEFRDTISRMLTKD 1
>27546
Length = 426
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Frame = -1
Query: 266 ATDVALGQEVAIKQINLQKQP---KKELIINEILVMKELKNPNIVNFLDSYLVGDELFVV 322
A + G +A K I+ K P K+ E+ ++ L +PNI+ G ++F+
Sbjct: 423 ADESGHGVNLACKIIDKAKAPIDFVKKFFPRELEILTRLDHPNIIQIHSILQRGPKIFIF 244
Query: 323 MEYLAGGSLTDVVTETC-MDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGS 381
M Y G + + +T +DEAQ + +AL++LH++ + HRD+K +N+LL +
Sbjct: 243 MRYAEKGDMLSHIKKTGPIDEAQTKVWFFQMAKALQYLHSHDIAHRDLKCENILLSKRLN 64
Query: 382 VKLTDFGF 389
VK+ DFGF
Sbjct: 63 VKIADFGF 40
>21808
Length = 1011
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Frame = +1
Query: 275 VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSYLVGDELFVVMEYLAGGSLTDV 334
VAIK + K+ + E +MK+L++P ++ D +F++ E + GSL +
Sbjct: 28 VAIKTLKSGTMDPKDFLA-EAQIMKKLRHPKLIQLYAVCTQDDPIFIITELMKNGSLLEF 204
Query: 335 VTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQ 392
+ + + + + + +L + IHRD+ + N+L+ +VK+ DFG
Sbjct: 205 LQGKGRVLKLPALIDIGAQIACGMAYLESQNYIHRDLAARNILVSDNNTVKIADFGLARV 384
Query: 393 ITPEQSKRSTMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPY 443
I ++ + P W APE + K D+WS GI+ E V G PY
Sbjct: 385 IKEDEYEARVGARFPIKWTAPEAANYNRFTIKSDVWSFGILLTETVTYGRVPY 543
>19301
Length = 712
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +2
Query: 245 PKKKYTRYEKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELKNP 304
P + T E +G GA G VF A +EVA+K++ K+ +I +++L +P
Sbjct: 299 PFESITDLEWLGSGAQGAVFLGKLCA--EEVAVKKVRDIKE-------TDIRNLRKLNHP 451
Query: 305 NIVNFLDSYLVGDELFVVMEYLAGGSLTDVVTETC-MDEAQIAAVCRECLQALEFLHANQ 363
NI++F ++MEY G L +V+ + + A + ++ + +LH+++
Sbjct: 452 NIISFKGVCTQAPCYCIIMEYCPYGQLYEVLRDGKEIPPALVLDWSKQIASGMNYLHSHK 631
Query: 364 VIHRDIKSDNVLLGMEGSVKLTDFG 388
+IHRD+KS NVL+ VK++DFG
Sbjct: 632 IIHRDLKSPNVLVAKNDVVKISDFG 706
>11780
Length = 1713
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
Frame = +3
Query: 253 EKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDS 312
E IG+G G V+ + GQ VAIKQ+ K ++ + E VM L++ N+V +
Sbjct: 615 EAIGKGDFGDVYKG--MYRGQPVAIKQLK-DKDRGEQSFLQEASVMTSLRHDNLVRLI-G 782
Query: 313 YLVGDELFVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQVIHRD 368
++G+ +F+V E++ G+L + + + QI C A+E+L + +++HRD
Sbjct: 783 VVLGETIFLVTEFMGKGNLVEYLRSRGRSVITKKDQINFATDTC-AAMEYLESKRLVHRD 959
Query: 369 IKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPY-WMAPEVV 415
+ + NVL+ +G K++DFG Q T V P W APE +
Sbjct: 960 LAARNVLVHDDGKAKVSDFGLAKFGDFSQ----TSVKFPIKWTAPEAL 1091
>09007
Length = 1440
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Frame = -1
Query: 255 IGQGASGTVFTATDVALGQE---VAIKQINLQKQPKK-ELIINEILVMKELKNPNIVNFL 310
+GQG GTV A A E VA+K ++ K K + + E +M+ L + NIV
Sbjct: 855 LGQGHFGTVRQAIWTAESGEKVQVAVKCLSKDKIHKDGQEFLKETAIMQMLDHENIVRVY 676
Query: 311 DSYL-VGDELFVVMEYLAGGSLTDVVTETCMD-EAQIAAVC---RECLQALEFLHANQVI 365
+ G ++ +V E SL + V E + + +C ++ + +L + +++
Sbjct: 675 GVVMDNGADIMLVTELAPMRSLLECVKEVSARVDFSVPRLCDFSQQVCDGMSYLESKRLV 496
Query: 366 HRDIKSDNVLLGMEGSVKLTDFGFCAQITP----EQSKRSTMVGTPY-WMAPEVVTRKAY 420
HRD+ + N+LL + VK++D G + QS+++ + W APE +
Sbjct: 495 HRDLAARNILLFSKSKVKISDVGVSGALGAGKEYYQSQQTIHLQNAVAWCAPESFRNLCF 316
Query: 421 GPKVDIWSLGIMAIE-MVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNR 479
D+W+ G++ E G P+ N + + + + L+ P+ + + +
Sbjct: 315 SSASDVWAFGVLLWEFFTHGFQPWAGLNGQQIMEAVDAPQSQRLEQPDLCPKEYYAVMLK 136
Query: 480 CLEMDVEKRGSAKELL 495
C E + ++R + +L
Sbjct: 135 CWEQEPQRRPTFSQLF 88
>21079
Length = 878
Score = 66.2 bits (160), Expect(2) = 1e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Frame = +1
Query: 303 NPNIVNFLDSYLVGDELFVVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLH 360
+P ++ D++ + +VME++ G L + V + + E R+ + ++H
Sbjct: 1 HPKLLMLWDAFEAPRTMVLVMEFVGAGELFERVIRDDFVLTERDCVHFVRQICSGVGYMH 180
Query: 361 ANQVIHRDIKSDNVLLGMEGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 418
++H D+K +NVL + S +K+ DFG P S + + GTP ++APEVV
Sbjct: 181 TQSILHLDLKPENVLCVSDNSNQIKIIDFGLARFYKPGDSLQ-VLFGTPEFIAPEVVNYD 357
Query: 419 AYGPKVDIWSLGIMAIEMVEGEPP 442
D+WS+G++ ++ G P
Sbjct: 358 EINFTTDMWSIGVICYILLSGLSP 429
Score = 21.2 bits (43), Expect(2) = 1e-11, Method: Compositional matrix adjust.
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +2
Query: 474 RDFLNRCLEMDVEKRGSAKELLQHPFL 500
+DF+ C + EKR + ++ +H +L
Sbjct: 524 KDFIGNC*SREKEKRMTIEQCDKHSWL 604
>00715
Length = 1788
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Frame = +1
Query: 293 NEILVMK-ELKNPNIVNFLDS---YLVGDELFVVMEYLAGGSLTDVVT--ETCMDEAQIA 346
NE+L + L++ N+V+ L + + D ++ MEY+ +L ++ + +D +
Sbjct: 70 NELLAFRCGLRHVNVVSILGATSLHRFEDGAWLAMEYVGPLNLQTILNDHQQDIDSSMRL 249
Query: 347 AVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITP----------- 395
++ + + L +LH+ ++H D+K N LL + +++ DFG C Q+TP
Sbjct: 250 SLALQMARGLHYLHSINIVHLDLKPANCLLTRDLKLRIADFGCCHQLTPTGLDMGEREGG 429
Query: 396 -----------EQSKRSTMVGTPYWMAPEVVTRKAYGPKV--DIWSLGIMAIEMVEGEPP 442
+ + ++ + GT + APE++ K P V D++SLGI +M + P
Sbjct: 430 MAGNELELTPVQGAWKNELAGTLAYRAPELL--KGLQPSVRSDVYSLGITLWQMCTRQGP 603
Query: 443 YLNENPLRALYLIATNGT----PELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 496
Y +Y + + P + +FRD +C VE R ++ +++
Sbjct: 604 YEGVPAHAVVYQVVSKDLRPCPPPSTEDDPFEVMFRDLYTQCWARRVEDRPTSLDVVH 777
>12786
Length = 460
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 22/129 (17%)
Frame = -3
Query: 337 ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPE 396
E +D I RE L+A++ LH VIH D+K N +L + G++KL DFG + +
Sbjct: 428 EQGLDRMMIKFYWREMLRAVKALHNEGVIHSDLKPANFML-VAGNLKLIDFGIANTLQQD 252
Query: 397 QSK--RSTMVGTPYWMAPEVV------------------TRKAY--GPKVDIWSLGIMAI 434
++ + + VGTP +M+PE + T+ Y G + D+WSLG +
Sbjct: 251 KTSVLKDSRVGTPSYMSPEAIMAACDDSADDSMEEDGHRTKPKYKVGVRSDVWSLGCILY 72
Query: 435 EMVEGEPPY 443
MV G P+
Sbjct: 71 NMVYGRTPF 45
>17975
Length = 449
Score = 65.5 bits (158), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Frame = +3
Query: 266 ATDVALGQEVAIKQINLQK--QPKKELIINEILVMKELKNPNIVNFLDSYLVGDELFVVM 323
A V G++VA+K I+ K + + + E+ MK +++PN+V + +L++++
Sbjct: 24 ARHVFTGEKVAVKVIDKTKLDEVSRSHLFQEVRCMKLVQHPNVVRLYEVIDTQTKLYLIL 203
Query: 324 EYLAGGSLTDVVTETC--MDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGME-G 380
E GG + D + ++E R+ ++A+ + H V+HRD+K +NV+ + G
Sbjct: 204 ELGDGGDMYDYIMRHSGGLEEKLAKRYFRQIVEAISYCHKLHVVHRDLKPENVVFFEKPG 383
Query: 381 SVKLTDFGF 389
VKLTDFGF
Sbjct: 384 LVKLTDFGF 410
>26560
Length = 398
Score = 64.7 bits (156), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = -1
Query: 342 EAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRS 401
E ++ E + LE +H+ V++RD+K N+LL G V+++D G + ++ S
Sbjct: 359 EKEVRFYAAEVMLGLEHMHSRFVVYRDLKPANILLDENGHVRISDLGLACDFSKKRPHAS 180
Query: 402 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 447
VGT +MAPEV+ + ++Y D +S G M ++++G P+ N
Sbjct: 179 --VGTHGYMAPEVLMKGQSYDSSADWFSFGCMLYKLLKGHSPFRQHN 45
>07940
Length = 1336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = -3
Query: 354 QALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGT--PYWMA 411
+ +E+L + Q IHRD+ + NVL+ E +K+ DFG + R T G WMA
Sbjct: 314 RGMEYLASKQCIHRDLAARNVLVAEEYVLKIADFGLTRNLQQFDYYRKTTDGRLPVKWMA 135
Query: 412 PEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPY 443
PE + + Y K D+WS G++ E+ G PY
Sbjct: 134 PEALFDRKYTSKSDVWSYGVLLWEIFTLGGNPY 36
>14116
Length = 1017
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 15/224 (6%)
Frame = -1
Query: 229 DEEIMEKLRTIVSIGDPKKKYTRYEKIGQGASGTV----FTATDVALGQEVAIKQINLQK 284
DE++M KL S+ ++ T E+IG+G G V T + VA+K ++
Sbjct: 687 DEDMM-KLIENESLLIDREFLTMGEEIGKGNFGCVKRGFLTLPEQKGDILVAVKTLHNNN 511
Query: 285 QPKKEL--IINEILVMKELKNPNIVNFLDSYLVGDEL-FVVMEYLAGGSLTDVVTETCMD 341
+ EL + E L+MK+ + N++ + L D++ VV+ ++ G L + + D
Sbjct: 510 PREIELQSFLQEALIMKDFHHSNVLTLIGICLNLDDMPLVVLPFMKHGDLLTYIRD---D 340
Query: 342 EAQ-----IAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPE 396
+ Q + + + +++L + +HRD+ + N +L + VK+ DFG I +
Sbjct: 339 QHQPTIKDLIMYGVDIARGMDYLAGLKFVHRDLAARNCMLDEDFHVKVADFGLARDIYEK 160
Query: 397 Q--SKRSTMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMV 437
+ S + P WMA E + + Y K D+WS G++ E++
Sbjct: 159 EYYSSENKKAKLPVKWMALESLEKGNYDSKTDVWSYGVVLWELL 28
>25019
Length = 730
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Frame = +3
Query: 371 SDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG 430
++NVLL +G VKLTDFG C + T GT +MAPE++TR +G VD WSLG
Sbjct: 258 AENVLLDKDGHVKLTDFGLCKEAITGTRVTHTFCGTIEYMAPEILTRTGHGKAVDWWSLG 437
>26711
Length = 405
Score = 61.2 bits (147), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Frame = -2
Query: 347 AVCRECLQALEFLHANQVIHRDIKSDNVLLGME--GSVKLTDFGFCAQITPEQSKRSTMV 404
V ++ L L+ +HA V+H D+K N+LL + SV+L DFG ++ P Q
Sbjct: 404 GVVKQVLDILQHVHAQGVVHMDLKPSNLLLSGDKLDSVQLIDFGLARKLYPPQETFLNH- 228
Query: 405 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 452
GTP + +PE + K D+W +G++A ++ G+ P+ ++ +L
Sbjct: 227 GTPGFTSPEALDVKPISTASDVWGVGVLAYILLSGQSPFQADSATESL 84
>04138
Length = 800
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 35/189 (18%)
Frame = +1
Query: 347 AVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCA--QITPEQSKRST-M 403
++C + L ++H N+++HRD+K+ N+L+ +G +KL DFG + Q R T
Sbjct: 25 SIC*AADERLYYIHRNKILHRDMKAANILITKQGVLKLADFGLARAFSVNLRQPNRYTNR 204
Query: 404 VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPY---LNENPLRALYLIATNG 459
V T ++ PE++ + Y +D W G + EM P +N L + + +
Sbjct: 205 VVTLWYRPPELLLGDRNYSTAIDQWGAGCIMAEMWTRNPIMQGTTEQNQLTLITQLCGSI 384
Query: 460 TPEL---------------------QN--PEKLSPIFR-----DFLNRCLEMDVEKRGSA 491
TPE+ +N ++ + I + D R L+MD +R SA
Sbjct: 385 TPEVWPGVTQLSMYHQIKGALAAGRKNIIRDRFARILKDPYGLDLFERLLKMDPSQRISA 564
Query: 492 KELLQHPFL 500
E L H F
Sbjct: 565 DEALNHDFF 591
>27405
Length = 532
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Frame = -3
Query: 261 GTVFTATDVALGQEVAIKQIN---LQKQPKKELIINEILVMKELK----NPNIVNFLDSY 313
G V+ G+ A+K ++ ++ + + L +NE +++ + +P IV ++
Sbjct: 524 GEVYGCRKADTGKMYAMKCLDKKRIKMKGGETLALNERIMLSLVSTGEGSPFIVCMTYAF 345
Query: 314 LVGDELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSD 372
++L +++ + GG L +++ E ++ E + LE +H+ V++RD+K
Sbjct: 344 QTPEKLCFILDLMNGGDLHYHLSQHGVFTEKEVRFYAAEVMLGLEHMHSRFVVYRDLKPA 165
Query: 373 NVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 427
N+LL G V+++D G + ++ S VGT +MAPEV+ + +AY D W
Sbjct: 164 NILLDENGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLMKGQAYDSSAD-W 6
>07836
Length = 1478
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Frame = -1
Query: 272 GQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSYLVGD----ELFVVMEYLA 327
G+ VA+K I + E+ L++ NI+ F+ + + G +LF++ +Y
Sbjct: 1478 GENVAVK-IFFTTEEASWFRETELYQTVLLRHENILGFIAADIKGTGSWTQLFLITDYHE 1302
Query: 328 GGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN--------QVIHRDIKSDNVLLGME 379
GSL D + +D +++ A+ + L LH + HRDIKS N+L+
Sbjct: 1301 NGSLHDYLLSRVLDSSEMLALAHSAICGLAHLHIEIFGTRGKPAIAHRDIKSKNILVKKN 1122
Query: 380 GSVKLTDFGFCAQITPEQSKRSTM----VGTPYWMAPEVV 415
G+ + D G + E ++ GT +MAPEV+
Sbjct: 1121 GTCCIADLGLAVRYISESNEVDVAPNPRQGTKRYMAPEVL 1002
>18663
Length = 600
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Frame = +2
Query: 401 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY----LNENPLRAL--YL 454
ST GTP ++APE++ + YG VD W+LG++ EM+ G P+ +ENP + YL
Sbjct: 2 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDIAGASENPDQNTEDYL 181
Query: 455 IATNGTPELQNPEKLS----PIFRDFLNR--CLEMDVEKRGSAKELLQHPFLKL 502
++ P LS + + FLN+ + + + +++ HPF K+
Sbjct: 182 FQVILEKTIRIPRSLSVKAASVLKGFLNKNPADRLGCHRESAFMDIVNHPFFKV 343
>21210
Length = 518
Score = 55.8 bits (133), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Frame = +3
Query: 407 PYWMAPEVVTRKA----YGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTP 461
PY MAPE + +A Y + D+WSLGI +E+ G PY + L + P
Sbjct: 15 PY-MAPERIDPRASSHGYDVRSDVWSLGITLMELATGRFPYRKWVSIFDQLQQVVRGVAP 191
Query: 462 ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 502
L + S F +F+N+CL D ++R +LL HPF++L
Sbjct: 192 CLPHDGAFSHDFVNFVNKCLTKDEKQRPKYNKLLAHPFVRL 314
>07291
Length = 833
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 344 QIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQ---SKR 400
Q+ R+ + +L +V+HR++ + N ++ +G ++L+D+G + P+ +
Sbjct: 52 QLLDFGRQIADGMAYLQEVKVVHRNLAARNCIVTEDGRLQLSDYGVTGSLFPQSYYTADD 231
Query: 401 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV-EGEPPY 443
S WMAPE + + K D+W+ G++ E++ G PY
Sbjct: 232 SPARDLVKWMAPETIDNFHFSSKSDVWAFGVVLWELLTRGITPY 363
>03508
Length = 1463
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 342 EAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEG-SVKLTDFGFCAQITPEQSKR 400
+ I E ++AL+F H+ ++HRD+K NV++ E ++L D+G A+ +
Sbjct: 868 DYDIRFYLYELMKALDFCHSMGIMHRDVKPHNVMIDHENKKLRLIDWGL-AEFYHPGMEY 1044
Query: 401 STMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYL 444
+ V + Y+ PE++ + Y +D+WSLG M M+ + P L
Sbjct: 1045NVRVASRYFKGPELLLDYQMYDYSLDMWSLGCMFASMIFRKEPLL 1179
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 464 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 500
+N +SP DFL++ L D +R +A+E + HP+
Sbjct: 1343 ENQHLISPEALDFLDKLLRYDHNERLTAREAMDHPYF 1453
>29011
Length = 374
Score = 55.1 bits (131), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Frame = +2
Query: 460 TPELQNPEKLSPI-----FRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLIL 514
+P ++P+ L I F+ FL++CL+++VE R SA +LL HPFL A L +L PLI
Sbjct: 38 SPLTEDPKSLHGIQRRLIFKTFLDKCLQVEVESRSSAVDLLTHPFLTKALELRTLGPLIR 217
Query: 515 AAKEAM 520
AAK +
Sbjct: 218 AAKREL 235
Score = 42.0 bits (97), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1
Query: 443 YLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNR 479
YL+E PLRALYLIA++G PE+ + + SP +DF +
Sbjct: 1 YLHEAPLRALYLIASHGRPEITSWDSTSPDLQDFFRQ 111
>28638
Length = 1458
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = -1
Query: 355 ALEFLHANQ--VIHRDIKSDNVLLG--MEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 410
AL FL + +IH D+K +N+LL ++K+ DFG Q+ + + + ++
Sbjct: 801 ALLFLATPEMNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYR 631
Query: 411 APEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 442
+PEV+ Y +D+WSLG + +EM GEPP
Sbjct: 630 SPEVLLGVPYDLAIDMWSLGCILVEMHTGEPP 535
>00486
Length = 797
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -2
Query: 402 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 447
T GT +MAPE++TR +G VD WSLG + +M+ G PP+ EN
Sbjct: 781 TFCGTIEYMAPEILTRTGHGKAVDWWSLGALMYDMLTGSPPFTAEN 644
>12672
Length = 773
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Frame = +3
Query: 348 VCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKR----STM 403
+ + +++L+ N +HRDIK+ N+LL E + K+ DF + K S +
Sbjct: 6 IVKGTASGIQYLNDNGHVHRDIKTANILLDSEYTAKVGDFATVVSAPSGEGKTVQNASVV 185
Query: 404 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL 463
+GT ++APE + K+D +S G++ +E++ G + ++ R ++++ +
Sbjct: 186 IGTAAYLAPEAIHFDV-STKLDSYSFGVVLLEVITG---LVAQDYSREERTLSSHIMENV 353
Query: 464 QNPEKLSPI---------------FRDFLNRCLEMDVEKRGSAKEL 494
+ PE++ D RCL + ++R + K++
Sbjct: 354 EEPEEIHDFVDQSAGTWPDGAVDKLYDISMRCLNLSKKQRPNVKDI 491
>14477
Length = 493
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Frame = -1
Query: 254 KIGQGASGTVFTATDVALGQEVAI-----KQINLQKQPKKELIINEILVMKELKNPNIVN 308
K+G G G+V +E+ + K +L + ELI E VMK++ + +IV
Sbjct: 469 KLGAGNFGSVMKGVCRLDDREIPVAIKVLKNADLDPSVQSELI-KEAEVMKKMDHMHIVR 293
Query: 309 FLDSYLVGDELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHR 367
+ G+ + +V+E G L + + + I + + Q +E+L AN+ +HR
Sbjct: 292 LI-GLCEGETMMLVLELAKLGPLNKFLPKNKHLPLWNILELMWQVSQGMEYLEANKFVHR 116
Query: 368 DIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 413
D+ + N+LL E K++DFG ++ E + Y+MA E
Sbjct: 115 DLAARNILLCDEHFAKISDFGMSKTLSRENN---------YYMAQE 5
>11185
Length = 473
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 62/169 (36%), Gaps = 22/169 (13%)
Frame = +1
Query: 353 LQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFGFCA--------------------- 391
+ L ++H+ ++ D++ VLL G +K DFG
Sbjct: 31 VTGLHYIHSLGILFHDLRPSKVLLDTSGVLKFADFGLSKVEGENLEELFFKFAEAGDQWN 210
Query: 392 -QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 450
Q E K+ G+P +MAPEV D+W+LG + EM G L+ P
Sbjct: 211 IQSAEEMMKQVPTSGSPTYMAPEVFQGAEPSIMSDLWALGCVFYEMFSGS--RLSAKP-- 378
Query: 451 ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPF 499
SP F + L L+ D +R S L++H F
Sbjct: 379 -------------------SPEFLNLLESLLQKDSTRRLSWASLVKHAF 468
>17253
Length = 483
Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Frame = -1
Query: 275 VAIKQIN-LQKQPKKELIINEILVMKEL-KNPNIVNFLDSYLVGDELFVVMEYLAGGSLT 332
VA+K N +K + E+ +M++L ++PN+V+F+ + D ++ME+ G L
Sbjct: 459 VAVKTHNEAATDAEKSEFLRELSIMRKLPRHPNVVSFMGCCTMSDPALILMEFCCHGDLL 280
Query: 333 DVVTETCMDEAQIAAVCRECLQALEF----LHA---------NQVIHRDIKSDNVLLGME 379
+ + D L A +F LH N+++HRD+ + NVL+
Sbjct: 279 SFLRKRRPDRTVFLTSTANDLTARDFFSFALHVARGMAHVANNKIVHRDVAARNVLISER 100
Query: 380 GSVKLTDFGFCAQI 393
K++DFG ++
Sbjct: 99 NVCKVSDFGLSRRV 58
>20152
Length = 445
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +1
Query: 412 PEVVTRKAY-GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 470
PE++ +Y P VD+WSLG++ +V GE P+ N L +I Q P +S
Sbjct: 1 PEILLGDSYDAPAVDVWSLGVILYMLVVGEAPFQEANDSETLTMIMDC---RYQIPPHIS 171
Query: 471 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK--PLSSLTPLI 513
+D + + L+ + R S +L HP+L P ++ PLI
Sbjct: 172 HKCQDLIEKMLQREPVDRASLPHILAHPWLNDGDLTPTTAYLPLI 306
>17300
Length = 480
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +1
Query: 365 IHRDIKSDNVLLGMEGSVKLTDFGFCAQI---TPEQSKRSTMVGTPY-WMAPEVVTRKAY 420
+HRD+ + N+L+ K+ DFG +I T E + + P W APE + + +
Sbjct: 40 VHRDLAARNILVNEILVCKVADFGLSREIESDTTEGAYTTKGGKIPVRWTAPEAIAYRKF 219
Query: 421 GPKVDIWSLGIMAIE-MVEGEPPYLN 445
D+WS G++ E M GE PY N
Sbjct: 220 TSASDVWSFGVVMWEVMSYGERPYWN 297
>32000
Length = 644
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 26/156 (16%)
Frame = -1
Query: 378 MEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEM 436
M +K+ DFG + V T ++ APE++ + Y VDIWSLG + +EM
Sbjct: 584 MTAKMKIADFGLARVFGLPVRTYTHEVITLWYRAPEILLGCRFYSVPVDIWSLGCIFVEM 405
Query: 437 VEGEPPYLNENPLRALY-LIATNGTPE---------------------LQNPE---KLSP 471
+ + ++ + LY + T GTP+ L+N E LS
Sbjct: 404 MTRRALFPGDSEIDQLYRIFRTLGTPDEKVWPGVSKLPDYKPTFPKWPLKNLETVVSLSK 225
Query: 472 IFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLS 507
+ D L R L + +R SA+ ++HP+ K ++
Sbjct: 224 VGLDLLKRMLTYNPNRRISARSAMRHPYFNDMKRMT 117
>28157
Length = 400
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Frame = +3
Query: 273 QEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSYLVGDELFVVMEYLAGGSLT 332
++VA+K+I + + +K+ + E+ + + +PNIV + + +VMEY GGSL
Sbjct: 3 KDVAVKRI--ESEQEKKSFMQELKQLSRVSHPNIVCLYGA-CRDHPVCLVMEYAEGGSLY 173
Query: 333 DVVTETCMDEAQIAAVCR----ECLQALEFLHANQ---VIHRDIKSDNVLLGMEGS-VKL 384
+V+ + AA +C +E+LH + +IHRD+K N+LL G+ +K+
Sbjct: 174 NVLHGSGPQPQYTAAHAMNWLLQCALGVEYLHGMKPKALIHRDLKPPNLLLIQCGTKLKI 353
Query: 385 TDFGFCAQI 393
DFG I
Sbjct: 354 CDFGTACDI 380
>27274
Length = 396
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Frame = -1
Query: 413 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTP-ELQ 464
E++ + +GP VD+WSLGI+ E++ G P+ E R A+Y G+ ++
Sbjct: 375 ELLRGQQHGPTVDMWSLGILLHELLSGHVPFEPERGSRQMARNMMAVYAQIIRGSSRDVC 196
Query: 465 NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 500
+ LS DFL R ++++ KR ++++ HP++
Sbjct: 195 DGLALSTHGADFLRRLVQLEDTKRLTSQQAFSHPWI 88
>16708
Length = 1397
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = -1
Query: 343 AQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGSVKLTDFG 388
A + + + + ALE +H V+H D+K+DNVL+ G+ KLTD+G
Sbjct: 1094 AMVCCIAGQXVCALEHIHELGVVHMDVKADNVLVDAHGNCKLTDYG 957
>20559
Length = 430
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = -2
Query: 247 KKYTRYEKIGQGASGTVFTATDVALGQEVAIKQINLQKQ----PKKELIINEILVMKELK 302
+KY + EKIG+G GTVF A + + VA+K++ L P L EI ++KELK
Sbjct: 375 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL--REICLLKELK 202
Query: 303 NPNIVNFLD 311
+ NIV D
Sbjct: 201 HRNIVRLHD 175
>06358
Length = 1517
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 46/299 (15%)
Frame = +3
Query: 249 YTRYEKIGQGASGTVFTATDVALGQEVAI-----KQINLQKQPKKELIINEILV----MK 299
Y + G G VF A+ + +E ++ K ++ + +E I+ + V +
Sbjct: 12 YNQVASAGPGLLWKVFAASKKSTKEEASVFVFEKKSVDRYSRRDREAIVEVLRVGVQQLT 191
Query: 300 ELKNPNIVNFLDSYLVGDELFV-----VMEYLAG--GSLTDVVT------ETCMDEAQIA 346
+L++P I+ ++ E V LA G L+ + T + + + +I
Sbjct: 192 KLRHPKILAVINPLEESRETLAFATEPVFASLANVLGDLSSIXTVPKELQDYQLYDVEIK 371
Query: 347 AVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSK------ 399
+ +AL FLH + +++HR++ + ++L GS KL + FC + + QS
Sbjct: 372 HGLLQVTEALGFLHNDAKMMHRNVCPEAIMLTKLGSWKLAGYEFCVRSSDPQSTDPSYPF 551
Query: 400 ---RSTM--VGTPY--WMAPEVVTRKAYGPKVDIWSLGIMAIEMV-EGEPPYLNENPLRA 451
RS + V P+ +MAPE V G D++SLG++ + +G+P + L A
Sbjct: 552 YEWRSDIAPVTQPHLDFMAPEYVLTMQCGTGSDMFSLGLLVYSVFAKGKPLFECNGELSA 731
Query: 452 LYLIATNGTPELQN---------PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 501
+ EL++ PE L RD + L ++ R A +L + PF +
Sbjct: 732 F----KSNAEELRHMRVSLLGVVPEDL----RDHVKLLLNIEPAVRPDAAQLSKVPFFE 884
>32957
Length = 645
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 387 FGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 437
F C + + +++ T GT +MAPEV RK YG +VD W LGI+ E++
Sbjct: 3 FALCVEKSGGRTR--TFCGTREYMAPEVHERKEYGKEVDWWGLGILLHELL 149
>01106
Length = 878
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 16/148 (10%)
Frame = +3
Query: 248 KYTRYEKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI- 306
+Y K+G G TV+ D+ + VA+K + Q E ++E+ ++K ++ ++
Sbjct: 321 RYHVIRKLGWGHFSTVWLCWDLTCKRFVALKVVK-SAQHYTETALDEVKLLKCVRESDVA 497
Query: 307 -------VNFLDSYLV----GDELFVVMEYLAGGSLTDVVTETCMDE---AQIAAVCREC 352
V LD + + G + +V E L G +L ++ + + + R+
Sbjct: 498 DPARAKCVQLLDDFKISGVNGTHVAMVFEVL-GYNLLKLIIRSNYQGIPIHNVKLIIRQV 674
Query: 353 LQALEFLHAN-QVIHRDIKSDNVLLGME 379
L+ L ++HA ++IH DIK +N+L+ ++
Sbjct: 675 LEGLSYMHAKCRIIHTDIKPENILICVD 758
>20640
Length = 1492
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Frame = +1
Query: 365 IHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKR-STMVGTPY-WMAPEVVTRKAYGP 422
+HRD+ + N L+G + VK++DFG + R S P WM E + +
Sbjct: 10 VHRDLATRNCLVGHDLVVKISDFGLARSVHSVDYYRGSEHDAIPIRWMPLEAILYNKFST 189
Query: 423 KVDIWSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCL 481
+ D+WS G++ E+ PY + + L PE+ P + + +C
Sbjct: 190 QSDVWSFGVVLWEIFAFALQPYYGLTHEEVVRFVKEGKV--LACPERTPPPMYELMKQCW 363
Query: 482 E 482
Sbjct: 364 H 366
>32691
Length = 295
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +1
Query: 468 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAKE 518
K S F DF+++CL + E R +A +LLQH F+K A+ L +I AKE
Sbjct: 82 KWSTEFIDFVSKCLVKNPENRATAVDLLQHDFIKKAEACEILQAMIREAKE 234
>00394
Length = 548
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Frame = -2
Query: 245 PKKKYTRYEK-IGQGASGTVFTATDVALGQEVAIKQINLQKQPK--KELIINEILVMKEL 301
P ++ +++K IG+G+ TV+ D LG VA ++ +K K ++ E ++KEL
Sbjct: 307 PDNRFLKFDKEIGRGSFKTVYKGLDTELGVAVAWCELQDKKWNKAERQRFKEEAEMLKEL 128
Query: 302 KNPNIVNFLDSYLVGDE-----LFVVMEYLAGGSL 331
++PNIV F D + + + +V E + G+L
Sbjct: 127 QHPNIVRFFDYWEEHNHRNRKVIILVTELMTSGTL 23
>31789
Length = 676
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Frame = +2
Query: 245 PKKKYTRYE-KIGQGASGTVFTATDVALGQEVAIKQINLQKQPK--KELIINEILVMKEL 301
P ++ +++ +IG+G+ TV+ D LG VA ++ +K K ++ E ++KEL
Sbjct: 311 PDNRFLKFDVEIGRGSFKTVYKGLDTELGVAVAWCELQDKKWNKTERQRFKEEAEMLKEL 490
Query: 302 KNPNIVNFLDSYLVGDE-----LFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQA 355
++PNIV F D + + + +V E + G+L + ++ + CR+ L+
Sbjct: 491 QHPNIVRFFDYWEEHNHRNRKVIILVTELMTSGTLKTYLKRFKKINLKVLKNWCRQILKG 670
Query: 356 L 356
L
Sbjct: 671 L 673
>36481
Length = 806
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Frame = +2
Query: 256 GQGASGTVFTATDVALGQEVAIKQI-NLQK-QPKKELIINEILVMKELKNPN----IVNF 309
G+G G V D+ G ++A+K I N+ K + +L IN + ++E K+P+ V
Sbjct: 389 GEGTFGKVVQCKDLLKGDDIALKIIKNVDKYREAAKLEINVLEKLRE-KDPHAKHMCVQM 565
Query: 310 LDSYLVGDELFVVMEYLAGGSLTDVVTETCMDEA---QIAAVCRECLQALEFLHANQVIH 366
LD + + + L G S+ D + + Q+ + + A+ FLH NQ+ H
Sbjct: 566 LDWFDYHGHVCISFHML-GLSVFDFLKDNSYGAYPIEQVRHISYQLCYAVNFLHENQLTH 742
Query: 367 RDIKSDNVLL 376
D+K +N+L
Sbjct: 743 TDLKPENILF 772
>07833
Length = 1504
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Frame = -3
Query: 298 MKELKNPNIVNFLDSYLVGDELFVVMEYLAGGSLTDVV---TETCMDEAQIAAVCRECLQ 354
++ +PN++ L L ++ +++ GSL + + + +D+ Q + +
Sbjct: 1457 LRIFNHPNVLPVLACCNQPPNLVLISQFMPFGSLYNTLHGESGIVVDQNQSLRFAMDIAR 1278
Query: 355 ALEFLHANQ--VIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 412
+EFLH+ + + + + S +V++ + + ++ +C E+ K V +P WMAP
Sbjct: 1277 GMEFLHSMEPTIPNFLLTSKHVMIDEDLTARINMADYCFSFH-EKGK----VYSPAWMAP 1113
Query: 413 EVVTRK---AYGPKVDIWSLGIMAIEMVEGEPPY 443
E + R+ D+WS I+ E+ E P+
Sbjct: 1112 EALQRRPDDINTRAADMWSFAILMWELETREVPF 1011
>26009
Length = 886
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 328 GGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL 376
G LT + +V ++ + AL+F+H+ Q++HRDIK +NVL+
Sbjct: 666 GTCLTPSRRNKACGSREAKSVMKQLVSALDFMHSKQLVHRDIKPENVLI 812
>18996
Length = 491
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Frame = +2
Query: 365 IHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQ------SKRSTMVGTPYWMAPEVVTRK 418
IHRD+ + N+L+ VK++DFG AQ S+R + W +PE +
Sbjct: 2 IHRDLAARNILVD-RSCVKISDFGL-AQFANADGYYYGISQRDIPIK---WYSPEAIETC 166
Query: 419 AYGPKVDIWSLGIMAIEMV-EGEPPYL 444
+ D+WS G+ EM GE P L
Sbjct: 167 KFSSYSDVWSYGVTLFEMFSRGEIPNL 247
>29590
Length = 320
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +3
Query: 386 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 444
D GF + R ++GTP ++APEV+ + + D+WSLG+++ M+ P++
Sbjct: 6 DLGFACLTNTGEDIRD-IIGTPDYVAPEVLDYEPLSIQTDMWSLGVLSYVMLTACSPFV 179
>31489
Length = 329
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +3
Query: 295 ILVMKELKNPNIVNFL------DSYLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV 348
I ++K K+ NI++ DSY ++ VV + + + ++ + E I
Sbjct: 3 IKILKHFKHDNIISIREILKPKDSYHDFKDIHVVFDLMESDLHRIIYSDQPLTEEHIRYF 182
Query: 349 CRECLQALEFLHANQVIHRDIKSDNVL 375
+ L+ L+++H+ V+HRD+K N+L
Sbjct: 183 LYQILRGLKYIHSANVVHRDLKPSNLL 263
>18481
Length = 437
Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = -1
Query: 321 VVMEYLAGGSLTD--VVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM 378
+VME L G SL + V+ + I V + L LEF+H IHRD+K DN L+G+
Sbjct: 266 LVMELL-GPSLEELFVICKRRFTLKTILMVSDQLLSRLEFIHQKCFIHRDLKPDNFLMGL 90
Query: 379 E---GSVKLTDFGFCAQITPEQ 397
+ + DFG + Q
Sbjct: 89 GRHCHRLYIIDFGLSKRYKDTQ 24
>17516
Length = 453
Score = 38.1 bits (87), Expect = 0.010, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -3
Query: 402 TMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGE 440
T+ GTP +MAPEV+ +K Y K D++SL I+ E+ G+
Sbjct: 442 TLAGTPVYMAPEVLLQKGQYDMKADVYSLAIILWELWYGQ 323
>16350
Length = 1108
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 473 FRDFLNRCLEMDVEKRGSAKELLQHPFLKL 502
F DFL LE D E+R +A + LQHP+LKL
Sbjct: 756 FADFLAPMLEFDPEQRATAAQSLQHPWLKL 845
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 404 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 446
+ T + EV+ YG DIWS MA E+ G+ YL E
Sbjct: 413 IQTRQYRCLEVLIGAGYGTPADIWSTACMAFELATGD--YLFE 535
>20513
Length = 405
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -1
Query: 473 FRDFLNRCLEMDVEKRGSAKELLQHPFLKL-AKPL-SSLTPLILAAKEAMKSNR 524
F DFL LE D E+R +A + LQHP+LKL A P S LI KE+M R
Sbjct: 288 FADFLAPMLEFDPEQRATAAQSLQHPWLKLDA*PEPSGSQQLICLFKESMIGQR 127
>18401
Length = 463
Score = 35.0 bits (79), Expect = 0.076, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 42/142 (29%)
Frame = -3
Query: 401 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG----------EPPYLNENPLR 450
ST+V T ++ APEV+ + D+WS+G + E+ G E + E L
Sbjct: 458 STIVSTRHYRAPEVILELGWSHPCDVWSVGCIMFELYTGYTLFQTHDNKEHLAMMERILG 279
Query: 451 AL-YLIATNGTPE-------LQNPEKLS----------PIFR--------------DFLN 478
+L Y +A + L PE+ S P+ R D +
Sbjct: 278 SLPYRMAKKTKKQKYFHHGRLDVPERSSMARYVRENTKPLLRYVKDRENKDHQQLFDLMK 99
Query: 479 RCLEMDVEKRGSAKELLQHPFL 500
+ L + R S + LQHPF
Sbjct: 98 KLLAYEASSRYSLLQALQHPFF 33
>14104
Length = 573
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 470 SPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 502
+P F+ CL+MD +R + +LLQHP++ L
Sbjct: 91 APQAMSFMQSCLKMDPAERLTCHQLLQHPYMDL 189
>23319
Length = 2235
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 29/124 (23%)
Frame = +3
Query: 412 PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL----NENPLRALYLIATNGTP-ELQNP 466
P+V K Y +D+WS G + E+ P +++ L+ ++ + GTP E Q P
Sbjct: 3 PDVYXAKMYSTSIDMWSAGCIFAELANAGRPLFPGNDDDDQLKRIFKLL--GTPTEDQWP 176
Query: 467 -------EKLSPIF-----------------RDFLNRCLEMDVEKRGSAKELLQHPFLKL 502
++ P++ RD L L R SA E LQHP+
Sbjct: 177 GMTQLPNYRMFPMYHVTTTWQQVVPKLNSKGRDLLQCLLVCCPSDRMSADEALQHPYFAD 356
Query: 503 AKPL 506
PL
Sbjct: 357 LPPL 368
>11404
Length = 563
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Frame = +1
Query: 251 RYE---KIGQGASGTVFTATDVALGQEVAIKQINLQK----QPKKELIINEILVMKELKN 303
RYE IG+G+ G V A D ++VAIK I +K Q + E+ + E++ + N
Sbjct: 142 RYEIDSLIGKGSFGQVVKAYDHTDNEQVAIKIIKNKKPFLNQAQIEVKLLEMMNRHDTDN 321
Query: 304 P-NIVNFLDSYLVGDELFVVMEYLAGGSLTDVVTETCMDEAQI---AAVCRECLQALEFL 359
IV ++ L +V E L+ +L D++ T + ++ AL FL
Sbjct: 322 KYYIVRLKRHFMFRSHLCLVFELLS-YNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFL 498
Query: 360 HA--NQVIHRDIKSDNVLL 376
+IH D+K +N+LL
Sbjct: 499 ATPEMSIIHCDLKPENILL 555
>03294
Length = 1684
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 26/103 (25%)
Frame = -1
Query: 424 VDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-------------------ATNGTPELQ 464
VD+WS+G + +M+ P + ++ + L+ I A NG L
Sbjct: 1672 VDVWSIGTIFADMLIRTPIFKGDSEIDQLFKIFRIIGTPTEQTWPEFHKLPAFNGMFPLW 1493
Query: 465 NPEKLSPIFR-------DFLNRCLEMDVEKRGSAKELLQHPFL 500
KLS D + R L+ D +R S K++LQH +
Sbjct: 1492 KEGKLSETLTDLDSLGLDLIERTLKCDPAQRISCKKMLQHAYF 1364
>17637
Length = 447
Score = 32.3 bits (72), Expect = 0.51, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 409 WMAPEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPYLNENP 448
W++ E + + Y D+WS G++ EM G+ PY +P
Sbjct: 115 WLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEIDP 237
>21800
Length = 855
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Frame = +2
Query: 285 QPKKELIINEILVMKELKNPN--------IVNFLDSYLV----GDELFVVMEYLAGGSLT 332
Q E ++EI ++K ++N + V LD + + G + +V E L L
Sbjct: 416 QHYTETALDEIKLLKCVRNSDETDPAREKSVQLLDDFKISGVNGTHVCMVFEVLGYNLLK 595
Query: 333 DVVTETCMD--EAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGME 379
++ + + R+ L+ L +LHA +IH DIK +N+L+ ++
Sbjct: 596 LIIRSNYQGIPVHNVKLIIRQVLEGLNYLHAKCNIIHTDIKPENILICVD 745
>37063
Length = 455
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 13/64 (20%)
Frame = -2
Query: 382 VKLTDFGFCAQI--------TPEQSKRSTMVGTPYWMAPEVV-----TRKAYGPKVDIWS 428
+K+ DF + I TPE T VG+ +MAPEVV +Y + D+WS
Sbjct: 406 LKICDFDLASGINCDGDGTKTPELL---TPVGSAEYMAPEVVDAWVGESFSYDKRCDMWS 236
Query: 429 LGIM 432
LGI+
Sbjct: 235 LGII 224
>13305
Length = 549
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 409 WMAPEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPY 443
WMA E + Y + D+WS G++ E+ G PY
Sbjct: 23 WMAVESLFNNTYTTQSDVWSFGVVLWEIFTLGGTPY 130
>31120
Length = 439
Score = 30.0 bits (66), Expect = 2.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 413 EVVTRKAYGPKV-DIWSLGIMAIEMVEGEPPYLNEN 447
EVV Y PK+ D WSLG++ M+ G+ P+ + N
Sbjct: 1 EVVCGVPYDPKMADAWSLGVILFIMLNGKMPFDDSN 108
>22005
Length = 873
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 87/244 (35%), Gaps = 61/244 (25%)
Frame = +1
Query: 255 IGQGASGTV----FTATDVALGQEVAIKQ-----INLQKQPKKEL---IINEILVMKELK 302
IGQGA G V F +G+ + K+ L++ ++L E +M +
Sbjct: 7 IGQGAFGRVSKLKFLGLASLVGELIPEKRP*LL*KMLKEDASEDLQSDFEREASLMADFD 186
Query: 303 NPNIVNFLDSYLVGDELFVVMEYLAGGSLTD----------------------------- 333
+PNIV L +G + ++ E+++ G L D
Sbjct: 187 HPNIVKLLGVCAIGKPMCLLFEFMSKGDLNDFLRLCSPENYNLPVSRSQNLVVDLEDGLR 366
Query: 334 --VVTETCMDEAQIAAVCRECLQALE----------------FLHANQVIHRDIKSDNVL 375
V E C + Q R+C L +L +HRD+ + +
Sbjct: 367 VEVEAEECEKDTQSED--RDCSGMLXTKDQLYISQQISAGMAYLAQKDYVHRDL-ATRTV 537
Query: 376 LGMEGSVKLTDFGFCAQI-TPEQSKRSTMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMA 433
++DFG + + + + S P WM E + + + D+WS G++
Sbjct: 538 XSRTT*S*ISDFGLARSVHSVDYYRGSEQDAIPIRWMPLEAILYSKFSTQSDVWSFGVVL 717
Query: 434 IEMV 437
E++
Sbjct: 718 WEIL 729
>01970
Length = 2861
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -1
Query: 366 HRDIKSDNVLLGMEGSVKLTDFGF-CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 424
+RD +D V + ++K + G CA ITP++ + W++P R G V
Sbjct: 2735 YRDQTNDQVTIDSAEAIKKYNVGIKCATITPDEERVEEFKLKKMWLSPNGTIRNILGGTV 2556
>28068
Length = 450
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 1 MSDNGELEDKPPAPPVRMSSTIFSTGG 27
+S++GE KPPAPPVR++ST G
Sbjct: 289 LSEDGE---KPPAPPVRLASTRMVNQG 218
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|165377181|ref|NP_598912.3| tyrosyl-tRNA synthetase
[Mus musculus]
(528 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
32464 333 1e-91
17358 171 3e-57
12674 171 9e-43
33013 122 3e-28
36599 39 0.004
18275 39 0.005
00180 28 9.5
>32464
Length = 634
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 174/209 (83%)
Frame = +2
Query: 64 KAGCEVTILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEKLKFIKGTDY 123
+AGCEVT+LFADLHAYLDNMKAPW+LLE R YYE VIKAML SI VPL+KL F+KGTDY
Sbjct: 2 RAGCEVTVLFADLHAYLDNMKAPWQLLEQRVKYYECVIKAMLRSINVPLDKLHFVKGTDY 181
Query: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 183
QLS EYT DVYRLS++VT+HDAKKAGAEVVKQV HPLLSGL+YPGLQALDEEYLKVDAQF
Sbjct: 182 QLSNEYTRDVYRLSTMVTKHDAKKAGAEVVKQVSHPLLSGLIYPGLQALDEEYLKVDAQF 361
Query: 184 GGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMXXXXXXXKIXXXXXXXXXXX 243
GGVDQRKIFTFAEKY+ +GYSKR+HLMNPMVPGLTGSKM KI
Sbjct: 362 GGVDQRKIFTFAEKYMTRMGYSKRIHLMNPMVPGLTGSKMSSSEEDSKIDLLDSPXQLKK 541
Query: 244 XXXXAFCEPGNVENNGVLSFIKHVLFPLK 272
A CEPGNVE+NGVLSF KHVLFPL+
Sbjct: 542 KLSNAXCEPGNVEDNGVLSFCKHVLFPLR 628
>17358
Length = 635
Score = 171 bits (434), Expect(2) = 3e-57, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 101/122 (82%)
Frame = +2
Query: 361 EEVIPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLV 420
+EV P+RLD+RVGKI SV+KHP+ADSLY+E +D+GE RTV+SGL VP EELQDRL
Sbjct: 272 DEVSPARLDLRVGKITSVKKHPEADSLYIESVDLGEESERTVISGLAGLVPMEELQDRLG 451
Query: 421 VVLCNLKPQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERVFVQGYEKGQPDEE 480
V LCNLKP KMRG++S GML+CASV+ R VEPL+PP GS+PG+RVFV+GYEKG PDE+
Sbjct: 452 VFLCNLKPVKMRGIESCGMLMCASVDD-PRAVEPLNPPEGSSPGDRVFVEGYEKGTPDEK 628
Query: 481 LK 482
L
Sbjct: 629 LN 634
Score = 69.3 bits (168), Expect(2) = 3e-57, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +3
Query: 273 SEFVILRDEKWGGNKTYTVYLELEKDFAAEVVHPGDLKNSVEVALNKLLDPIREKFNTPA 332
+ F + R + GG+ + Y ELEK FA +HP DLK++VE LN LL P+RE+F++P
Sbjct: 9 NHFTVKRSPENGGDIRFNSYDELEKAFANMELHPADLKSAVEAYLNCLLKPVREQFDSPD 188
Query: 333 LKKLASAAYPDPSKQKP 349
+K L S AYP K+KP
Sbjct: 189 MKTLVSKAYP-VQKKKP 236
>12674
Length = 829
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 120/175 (68%), Gaps = 1/175 (0%)
Frame = -2
Query: 355 AKNSEPEEVIPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEE 414
A +EPE++ SRLD R+GKI +VEKHPDAD+LYVE +D+GE +PRT+VSGLV +P E+
Sbjct: 630 AGAAEPEKMDVSRLDFRIGKITAVEKHPDADTLYVETVDLGEEKPRTIVSGLVNHIPIEQ 451
Query: 415 LQDRLVVVLCNLKPQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERVFVQGYEK 474
+Q+RL V +CNLK KMRGV S+GM++CA E +VE L+PP G PG+R+ GY
Sbjct: 450 MQNRLAVFMCNLKASKMRGVSSEGMIMCAKNE----KVEILEPPPGVVPGDRITFDGY-P 286
Query: 475 GQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTK-LGFVSCKSLKGGNIS 528
G PD++L PKKKV+E L+ D + + E +A +K F + G V +L IS
Sbjct: 285 GTPDKQLNPKKKVWETLKPDIRTNGERVATFKGAPFKVEGKGIVKAPTLTNAEIS 121
>33013
Length = 277
Score = 122 bits (307), Expect = 3e-28, Method: Composition-based stats.
Identities = 56/84 (66%), Positives = 69/84 (82%)
Frame = -1
Query: 361 EEVIPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLV 420
+E P RLDIRVGK++ V +HPDAD+LYV KID+ EA+PRT++SGLV+FV EEL RLV
Sbjct: 274 DEDAPHRLDIRVGKVIEVARHPDADTLYVLKIDLAEAQPRTIISGLVKFVTVEELDQRLV 95
Query: 421 VVLCNLKPQKMRGVDSQGMLLCAS 444
VLCNLKP KMRG+ S+GM+LC S
Sbjct: 94 AVLCNLKPSKMRGIMSEGMVLCTS 23
>36599
Length = 197
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = -3
Query: 440 LLCASVEGVSRQVEPLDPPAGSAPGERVFVQGYEKGQPDEELKPKKK 486
++CA E +VE L+PP G PG+R+ GY G PD++L PK+K
Sbjct: 159 VMCAKNE----KVEILEPPPGVVPGDRITFDGYP-GTPDKQLNPKRK 34
>18275
Length = 476
Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2
Query: 355 AKNSEPEEVIPSRLDIRVGKILSVEKHPD 383
A +EPE++ SRLD R+GKI +VEKHPD
Sbjct: 389 AGAAEPEKMDVSRLDFRIGKITAVEKHPD 475
>00180
Length = 1085
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 321 LDPIREKFNTPALKKLASAAYPDPSKQKPPAKGPAKNSEPEEVI--PSRLDIRVGKILSV 378
LDPIR NTP +KK A P S + PP +GP PE P + +G L++
Sbjct: 874 LDPIR---NTPMVKK--GAPNPPASYKNPPKRGPTTYPRPENTSKEPKTMATELGNSLAI 1038
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6680716|ref|NP_031502.1| ADP-ribosylation factor 1
[Mus musculus]
(181 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09827 330 2e-91
08153 312 5e-86
10862 176 5e-45
33605 106 1e-27
32860 103 1e-24
11378 105 8e-24
18208 99 1e-21
06991 74 5e-14
19506 71 3e-13
18949 69 1e-12
15662 66 7e-12
11965 48 2e-06
34468 47 4e-06
29196 42 1e-04
14775 42 2e-04
13750 41 2e-04
08428 40 6e-04
19006 38 0.002
33374 37 0.004
35581 36 0.009
33380 36 0.009
20877 36 0.010
33794 35 0.022
07465 35 0.022
26083 35 0.024
11728 33 0.061
13901 33 0.066
26536 33 0.072
17511 33 0.081
05468 31 0.36
01972 27 3.7
22540 27 4.1
34359 27 4.7
18743 26 7.3
>09827
Length = 1201
Score = 330 bits (847), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/184 (86%), Positives = 169/184 (91%), Gaps = 3/184 (1%)
Frame = -3
Query: 1 MGNIFANLFKGL---FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 57
MGN F +F GL FGKK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct: 1172 MGNAFQKIFSGLSFMFGKKDMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 993
Query: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR 117
YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSND+ERV EAREEL RML EDELR
Sbjct: 992 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERVQEAREELTRMLNEDELR 813
Query: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 177
DAVLLVFANKQDLP+AM AEIT+KLGLH LR+R WYIQ+TCAT+GDGLYEGLDWLSNQL
Sbjct: 812 DAVLLVFANKQDLPHAMATAEITEKLGLHGLRNRTWYIQSTCATTGDGLYEGLDWLSNQL 633
Query: 178 RNQK 181
+N K
Sbjct: 632 KNNK 621
>08153
Length = 1703
Score = 312 bits (799), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 146/176 (82%), Positives = 164/176 (93%)
Frame = +1
Query: 5 FANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64
F +LFK LFGKKE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 46 FVSLFKNLFGKKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 225
Query: 65 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVF 124
VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+NEA+EEL RML ED+LRDA++LVF
Sbjct: 226 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERINEAKEELARMLNEDDLRDAIILVF 405
Query: 125 ANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 180
ANKQDLPNA +A+E+T LGL +L+ R WY+QATCATSGDG+YEGL+WLS L+++
Sbjct: 406 ANKQDLPNAYSASEVTAHLGLANLKGRKWYMQATCATSGDGMYEGLEWLSTTLKHK 573
>10862
Length = 2896
Score = 176 bits (446), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 97/125 (77%)
Frame = -3
Query: 51 FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRM 110
+ + F VWDVGGQDKIRPLWRHY+ TQGLIFVVD DR+R++EAR+EL R+
Sbjct: 2516 IQCRNCQLQECQFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRI 2337
Query: 111 LAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGL 170
+ + E+RDA++L+FANKQDLP+AM EI +KLGL LR RNWY+Q +CAT+GDGL EGL
Sbjct: 2336 INDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRLRDRNWYVQPSCATTGDGLCEGL 2157
Query: 171 DWLSN 175
WL++
Sbjct: 2156 TWLTS 2142
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -1
Query: 8 LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
L +FG KEMRILM+GLDAAGKTT+LYK+KLG+ VT IPT+GFNVETV +KN++
Sbjct: 2644 LLSKIFGNKEMRILMLGLDAAGKTTLLYKMKLGQSVTXIPTVGFNVETVSFKNVN 2480
>33605
Length = 888
Score = 106 bits (264), Expect(2) = 1e-27, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%)
Frame = +1
Query: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74
+KE+R+LM+GLD AGKTTIL K +I T PT+GFN++T+E++ VWDVGGQ +
Sbjct: 490 EKEVRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNVWDVGGQQSL 669
Query: 75 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREE 106
R WR+YF++T GL++VVDS DR R+ + + +
Sbjct: 670 RSYWRNYFESTDGLVWVVDSADRMRIADCKRD 765
Score = 33.1 bits (74), Expect(2) = 1e-27, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 107 LMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHS 147
L +L E+ L A LLVFAN + P A+ + EI + L S
Sbjct: 765 LQGLLVEERLAGATLLVFANSRTCPGALXSQEIQQAMDLDS 887
>32860
Length = 330
Score = 103 bits (258), Expect(2) = 1e-24, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 65/89 (73%)
Frame = +2
Query: 78 WRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAA 137
W Y+ N++ +I V+DS DRER++ +EEL RMLA +ELR A LLVFANKQD+ M+AA
Sbjct: 8 WNTYYSNSEFIIMVIDSTDRERLSITKEELCRMLATEELRXAALLVFANKQDIKGCMSAA 187
Query: 138 EITDKLGLHSLRHRNWYIQATCATSGDGL 166
EI+ +L L S++ W+IQA C +G+G+
Sbjct: 188 EISXQLNLTSVKDHVWHIQACCGLTGEGV 274
Score = 25.4 bits (54), Expect(2) = 1e-24, Method: Compositional matrix adjust.
Identities = 7/16 (43%), Positives = 14/16 (87%)
Frame = +1
Query: 165 GLYEGLDWLSNQLRNQ 180
GLY+GL+W+++ +R +
Sbjct: 271 GLYQGLEWITSHIRRR 318
>11378
Length = 1688
Score = 105 bits (263), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 88/140 (62%)
Frame = +3
Query: 9 FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
F GL+ KK +++ +GLD AGKTT+L+ LK ++ +PT+ E + + FT +D+
Sbjct: 300 FLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDKMAQHVPTLHPTSEELSMGGMRFTTFDL 476
Query: 69 GGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQ 128
GG + R +W+ YF G++F+VD +DRER+ EA+ EL ++ ++++ +A +LV NK
Sbjct: 477 GGHRQARRVWKDYFPAVDGIVFLVDVHDRERLVEAKAELDSLMTDEQVANAPILVLGNKI 656
Query: 129 DLPNAMNAAEITDKLGLHSL 148
D P A + EI GL+SL
Sbjct: 657 DKPGAASEEEIRHWFGLNSL 716
>18208
Length = 458
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 64/88 (72%)
Frame = -1
Query: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
+E+RIL++GLD AGKTT+L +L + PT GFN+++V+ K VWD+GGQ +IR
Sbjct: 305 RELRILLLGLDNAGKTTLLKQLASEDPSHITPTQGFNIKSVQSKGFKLNVWDIGGQRRIR 126
Query: 76 PLWRHYFQNTQGLIFVVDSNDRERVNEA 103
P W++YF+NT LI+V+DS+D +R+ E
Sbjct: 125 PYWKNYFENTDLLIYVIDSSDTKRMEET 42
>06991
Length = 1860
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = -2
Query: 111 LAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGL 170
L EDEL+ ++L+VFANKQD+ AM E+ + LGL L++R + I T A G+GL E +
Sbjct: 1859 LEEDELKKSILMVFANKQDIEGAMTVTEVANSLGLPGLKNRKYQIFKTSAVKGEGLDEAM 1680
Query: 171 DWLSNQL 177
+WLSN L
Sbjct: 1679 EWLSNSL 1659
>19506
Length = 421
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -3
Query: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
MG+ LF+ +K + ++ GLDAAGKTT+LY LKLGE+VTTIPTIGFNVET++
Sbjct: 173 MGSALCTLFR----QKPVTVIYFGLDAAGKTTLLYNLKLGEVVTTIPTIGFNVETLDMNR 6
Query: 61 I 61
+
Sbjct: 5 V 3
>18949
Length = 414
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +3
Query: 47 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREE 106
PT E + ++FT +D+GG + R +W+ YF G++F+VD +D ER+ EA+ E
Sbjct: 15 PTGLPTSEELSMGGMTFTTFDLGGHRQARRVWKDYFPAVDGIVFIVDVHDTERITEAKAE 194
Query: 107 LMRMLAEDELRDAVLLVFANKQD 129
L +L +D++ D +LV NK D
Sbjct: 195 LDSLLRDDQIADIPVLVLGNKMD 263
>15662
Length = 455
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +2
Query: 73 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 132
+ R +W+ YF G++F+VD +DRER EA+ EL ++ ++++ +A +LV NK D P
Sbjct: 2 QARRVWKDYFPAVDGIVFLVDVHDRERFVEAKAELDSLMTDEQVANAPILVLGNKIDKPG 181
Query: 133 AMNAAEITDKLGLHSL 148
A + EI GLHSL
Sbjct: 182 AASEDEIRHWFGLHSL 229
>11965
Length = 3256
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Frame = +1
Query: 44 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEA 103
T + T G +KN++F ++DVGGQ R W H F++ +IF V ++ ++V
Sbjct: 133 TRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHE 312
Query: 104 REELMRMLAEDELRDAV----------LLVFANKQDL 130
E RM +L D++ +++F NK+DL
Sbjct: 313 DETTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDL 423
>34468
Length = 1502
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Frame = +1
Query: 19 RILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVE----TVEYKNISFTVWDVGGQDK 73
+I+++G GKT + Y+ LG+ T TIG + V+ +++ +WD GQ++
Sbjct: 499 KIIVIGDSNVGKTCLTYRFCLGKFPDKTEATIGVDFREKSIQVDSEHLKLQLWDTAGQER 678
Query: 74 IR-PLWRHYFQNTQGLIFVVD 93
R + +HY++N ++FV D
Sbjct: 679 FRKSMVQHYYRNVHAVVFVYD 741
>29196
Length = 431
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = -2
Query: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRD 118
KN++F ++DVGGQ R W H F++ +IF V ++ ++V E RM +L D
Sbjct: 229 KNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFD 50
Query: 119 AVL 121
++
Sbjct: 49 SIC 41
>14775
Length = 380
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = -2
Query: 30 KTTILYKLKLGEIV-TTIPTIG-----FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQ 83
KT +L + + G + T+PTI FN + N+ +T+WD GG + R LW +F+
Sbjct: 379 KTCLLRRYQKGFFMDRTMPTIAVLCSEFNESRTDPLNVRYTLWDTGGAETYRSLWVSHFR 200
Query: 84 NTQGLIFVVD 93
Q + V D
Sbjct: 199 GAQVALLVYD 170
>13750
Length = 503
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = -2
Query: 30 KTTILYKLKLGEIV-TTIPTIG-----FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQ 83
KT +L + + G + T+PTI FN + N+ +T+WD GG + R LW +F+
Sbjct: 502 KTCLLRRYQKGFFMDRTMPTIAVLCSEFNESRTDPLNVRYTLWDTGGAETYRSLWVSHFR 323
Query: 84 NTQGLIFVVD 93
Q + V D
Sbjct: 322 GAQVALLVYD 293
>08428
Length = 1109
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Frame = -3
Query: 16 KEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYKNISFTVWDVGG 70
+++++ ++G GK++I+ + G + TIG + + V+ F +WD G
Sbjct: 1074 RDVKVCLLGDSGVGKSSIVLRFVTGSYRPSQESTIGASFMSKSLVVDGAGYRFQIWDTAG 895
Query: 71 QDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDL 130
Q+K R L Y++ + V D R R ++ + ++ L + VL + NK DL
Sbjct: 894 QEKFRALAPMYYRGAAAAVIVYDVT-RPRTFKSVKSWIQELRSFGPPNIVLAIAGNKCDL 718
>19006
Length = 568
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Frame = -2
Query: 14 GKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVG 69
G + ++++VG A GKT +L + +PT+ N V+ K + +WD
Sbjct: 447 GCHKEKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTA 268
Query: 70 GQ---DKIRPLWRHYFQNTQGLI--FVVDSNDR-ERVNEAREELMRMLAEDELRDAVLLV 123
GQ D++RPL + +T ++ F +DS D E + E +R + +++
Sbjct: 267 GQEDYDRLRPL---SYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCP----NVPIIL 109
Query: 124 FANKQDLPNAMNAAEITDKLGLHSLR 149
NK+DL N N K+ +R
Sbjct: 108 VGNKKDLRNDENTKRELMKMKQEPVR 31
>33374
Length = 489
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAR---EELMRMLAEDELR 117
+ F +WD GQ++ L Y++ Q I V D +++ A+ +EL R +
Sbjct: 175 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASP---- 342
Query: 118 DAVLLVFANKQDLPN 132
+ V+ + NK DL N
Sbjct: 343 NIVIALAGNKADLAN 387
>35581
Length = 364
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +2
Query: 18 MRILMVGLDAAGKTTILYKLK----LGEIVTTIPTIGFNVETVEYKN---ISFTVWDVGG 70
+ +++G GKT +L +L L +T++ T + TV + S +WD G
Sbjct: 47 FKCVLLGDAGVGKTCLLNRLATDKFLDSPLTSLTTASL-LTTVTLTSGVMASVDLWDTAG 223
Query: 71 QDKIRPLWRHYFQNTQGLIFVVDSNDRERVNE 102
Q++ R L Y+++T+ ++ V D+ + ++ +
Sbjct: 224 QERYRSLTSSYYRDTKAVLIVYDAEHKLKLTD 319
>33380
Length = 282
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +3
Query: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRD 118
K + +WD GQ++ R + Y++ G I + D + E N A ++ + +
Sbjct: 54 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFN-AVQDWCTQIKTYSWDN 230
Query: 119 AVLLVFANKQDLPN 132
A +++ NK DL +
Sbjct: 231 AQVVLVGNKCDLED 272
>20877
Length = 381
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -1
Query: 164 DGLYEGLDWLSNQLRN 179
DGLYEGLDWLSNQL+N
Sbjct: 381 DGLYEGLDWLSNQLKN 334
>33794
Length = 779
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 48 TIGFNVETV--EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 97
T+ + T+ E K + +WD GQ + + R Y + QG+I V D ++
Sbjct: 695 TVAYKTTTILLEGKRVKLQIWDTSGQGRFCTIIRSYSRGAQGIILVYDITNK 540
>07465
Length = 1103
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Frame = +3
Query: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRD 118
+++ +WD GQ++ + + Y++ Q + + DR+ EA E R + EDE+ +
Sbjct: 339 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTVDRDSF-EALETWKRKV-EDEVGE 512
Query: 119 AVLLVFANKQDL 130
+++ NK DL
Sbjct: 513 IGMVIVQNKIDL 548
>26083
Length = 432
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Frame = +1
Query: 10 KGLFGK--KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVET----VEYKNIS 62
G FG ++ +++ +G + GKT+++ + T TIG + + +E + I
Sbjct: 49 SGEFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIR 228
Query: 63 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLL 122
+WD GQ++ R L Y +++ + V D + ++ + + + E D +++
Sbjct: 229 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTSKWIDDVRTE-RGSDVIIM 405
Query: 123 VFANK 127
+ NK
Sbjct: 406 LVGNK 420
>11728
Length = 635
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = -1
Query: 12 LFGKKEMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVET---VEYKNISFTVWD 67
F + ++ ++VG A GKT +L IPT+ N V+ K I+ +WD
Sbjct: 506 FFNMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPINLGLWD 327
Query: 68 VGGQ---DKIRPL 77
GQ D++RPL
Sbjct: 326 TAGQEDYDRLRPL 288
>13901
Length = 962
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Frame = -3
Query: 18 MRILMVGLDAAGKTTIL-----------YKLKLGEIVTTIPTIGFNVETVEYK---NISF 63
+++++G GKT+ + YK+ +G + F ++ + + NI
Sbjct: 285 FKVIIIGDPTVGKTSFVQRYVNDSFRRDYKMTIG--------VDFALKVIRWSDKCNIKL 130
Query: 64 TVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93
+WD+ GQ++ + R Y+++ I + D
Sbjct: 129 QLWDIAGQERFTSMTRVYYKDAHACIVMFD 40
>26536
Length = 829
Score = 33.1 bits (74), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Frame = +2
Query: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLA--EDEL 116
+ +S+T D GQ++ + HY ++ G I V D EA E + R L +DE
Sbjct: 122 RRVSWTFLDTAGQEEYSSMREHYTRSGDGFIVVYSVTDVTSFQEA-EAVFRWLTRFQDET 298
Query: 117 RDAVLLVFANKQDLPNAMNAA-----EITDKLGLHSLRHRNWYIQATCATSGDG---LYE 168
+L NK DL + ++ D+LG+ Y + T A +GD +Y
Sbjct: 299 SIHAVLC-GNKTDLTSDRKVTPEEGRKMADRLGM-------LYFE-TSAKTGDNVSQVYH 451
Query: 169 GL 170
GL
Sbjct: 452 GL 457
>17511
Length = 483
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Frame = -3
Query: 18 MRILMVGLDAAGKTTIL-----------YKLKLGEIVTTIPTIGFNVETVEYKNISFTVW 66
++++++G GKT+++ YK +G T + V+ + ++ +W
Sbjct: 364 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 203
Query: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERVNEAREELMRMLAEDELRDAVLLV 123
D GQ++ + L +++ + V D N ++ R+E + + + + +V
Sbjct: 202 DTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFRSLDSWRDEFLIQASPRDPENFPFVV 23
Query: 124 FANKQDL 130
NK DL
Sbjct: 22 IGNKIDL 2
>05468
Length = 1558
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Frame = -3
Query: 15 KKE--MRILMVGLDAAGKTTIL-----------YKLKLGEIVTTIPTIGFNVETVEYKNI 61
KKE +IL++G GKT+I+ Y+ +G + + + ++ +T+ I
Sbjct: 1553 KKEHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG-VDFALKVLNWDADTL----I 1389
Query: 62 SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93
+WD+ GQ++ + R Y++ G V D
Sbjct: 1388 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFD 1293
>01972
Length = 2359
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 46 IPTIGFNVETVEYKN----ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 97
+ T+G V + + + F VWD GQ+K L Y+ Q + + D R
Sbjct: 390 VATLGVEVHPLLFHTSRGKLKFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSR 557
>22540
Length = 337
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 166 LYEGLDWLSNQL 177
LYEGLDWLSN+L
Sbjct: 2 LYEGLDWLSNEL 37
>34359
Length = 1042
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 21/130 (16%)
Frame = +3
Query: 46 IPTIGFNVETVEYKN----ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR---E 98
+ T+G V +++ + F VWD GQ+K L Y+ I + D R +
Sbjct: 138 VATLGVEVHPLQFNTSRGLLRFNVWDTAGQEKFGGLRDGYYIQGTCAIIMFDVTSRVTYK 317
Query: 99 RVNEAREELMRML-------------AEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 145
V +L+R+ +D A +VF K+ + T L
Sbjct: 318 NVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKAIVFHRKRTCSTTTSVPRATTTLRS 497
Query: 146 HSLRHR-NWY 154
S R +W+
Sbjct: 498 RSCGWRASWW 527
>18743
Length = 465
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = +2
Query: 20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV------ETVEYKNISF 63
I MVGL A GKT I KL I T FNV T YKN +F
Sbjct: 131 IAMVGLPARGKTYISKKLTRYLNWIGISTRAFNVGEYRRAATNSYKNHNF 280
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6680724|ref|NP_031507.1| ADP-ribosylation factor 6
[Mus musculus]
(175 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10862 246 2e-91
09827 264 1e-71
08153 257 2e-69
33605 104 3e-26
11378 100 6e-22
18208 97 3e-21
32860 87 2e-19
19506 69 7e-13
15973 64 4e-11
18949 62 9e-11
15662 60 6e-10
06991 56 8e-09
11965 51 3e-07
34468 46 7e-06
33374 45 2e-05
33380 43 7e-05
07465 42 1e-04
08428 41 2e-04
29196 39 8e-04
26083 39 0.001
14775 39 0.001
13750 39 0.001
33794 38 0.003
35581 37 0.003
17511 35 0.018
13901 34 0.025
19006 34 0.027
01972 34 0.036
27191 33 0.061
05468 32 0.13
34359 32 0.13
10402 30 0.61
22781 29 1.2
26536 28 1.7
25960 28 2.3
11257 28 2.8
18743 27 4.0
18169 26 7.1
20544 26 7.9
>10862
Length = 2896
Score = 246 bits (627), Expect(2) = 2e-91, Method: Compositional matrix adjust.
Identities = 113/121 (93%), Positives = 118/121 (97%)
Frame = -3
Query: 55 KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRD 114
+ +FNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRD
Sbjct: 2492 QECQFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRD 2313
Query: 115 AIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 174
AIILIFANKQDLPDAMKPHEIQEKLGLTR+RDRNWYVQPSCAT+GDGL EGLTWLTSN+K
Sbjct: 2312 AIILIFANKQDLPDAMKPHEIQEKLGLTRLRDRNWYVQPSCATTGDGLCEGLTWLTSNHK 2133
Query: 175 S 175
S
Sbjct: 2132 S 2130
Score = 107 bits (266), Expect(2) = 2e-91, Method: Compositional matrix adjust.
Identities = 51/57 (89%), Positives = 56/57 (98%)
Frame = -1
Query: 1 MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNV 57
MGK+LSKIFGNKEMRILMLGLDAAGKTT+LYK+KLGQSVT IPTVGFNVETV++KNV
Sbjct: 2653 MGKLLSKIFGNKEMRILMLGLDAAGKTTLLYKMKLGQSVTXIPTVGFNVETVSFKNV 2483
>09827
Length = 1201
Score = 264 bits (675), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 120/171 (70%), Positives = 146/171 (85%)
Frame = -3
Query: 5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDV 64
LS +FG K+MRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDV
Sbjct: 1139 LSFMFGKKDMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 960
Query: 65 GGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQ 124
GGQDKIRPLWRHY+ TQGLIFVVD D++R+ EAR+EL R++N+ E+RDA++L+FANKQ
Sbjct: 959 GGQDKIRPLWRHYFQNTQGLIFVVDSNDKERVQEAREELTRMLNEDELRDAVLLVFANKQ 780
Query: 125 DLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175
DLP AM EI EKLGL +R+R WY+Q +CAT+GDGLYEGL WL++ K+
Sbjct: 779 DLPHAMATAEITEKLGLHGLRNRTWYIQSTCATTGDGLYEGLDWLSNQLKN 627
>08153
Length = 1703
Score = 257 bits (656), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 142/171 (83%)
Frame = +1
Query: 4 VLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWD 63
+ +FG KE+RILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWD
Sbjct: 55 LFKNLFGKKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 234
Query: 64 VGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANK 123
VGGQDKIRPLWRHY+ TQGLIFVVD DR+RI+EA++EL R++N+ ++RDAIIL+FANK
Sbjct: 235 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERINEAKEELARMLNEDDLRDAIILVFANK 414
Query: 124 QDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 174
QDLP+A E+ LGL ++ R WY+Q +CATSGDG+YEGL WL++ K
Sbjct: 415 QDLPNAYSASEVTAHLGLANLKGRKWYMQATCATSGDGMYEGLEWLSTTLK 567
>33605
Length = 888
Score = 104 bits (260), Expect(2) = 3e-26, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Frame = +1
Query: 12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVETVTYKNVKFNVWDVGGQDKI 70
KE+R+LMLGLD AGKTTIL K G+ + TI PT+GFN++T+ ++ K NVWDVGGQ +
Sbjct: 493 KEVRLLMLGLDNAGKTTILKKFN-GEDIDTISPTLGFNIKTLEHRGFKLNVWDVGGQQSL 669
Query: 71 RPLWRHYYTGTQGLIFVVDCADRDRIDEARQE 102
R WR+Y+ T GL++VVD ADR RI + +++
Sbjct: 670 RSYWRNYFESTDGLVWVVDSADRMRIADCKRD 765
Score = 30.0 bits (66), Expect(2) = 3e-26, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 103 LHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGL 141
L ++ + + A +L+FAN + P A+ EIQ+ + L
Sbjct: 765 LQGLLVEERLAGATLLVFANSRTCPGALXSQEIQQAMDL 881
>11378
Length = 1688
Score = 99.8 bits (247), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 79/133 (59%)
Frame = +3
Query: 12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIR 71
K +++ LGLD AGKTT+L+ LK + +PT+ E ++ ++F +D+GG + R
Sbjct: 318 KSGKLVFLGLDNAGKTTLLHMLKDDKMAQHVPTLHPTSEELSMGGMRFTTFDLGGHRQAR 497
Query: 72 PLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMK 131
+W+ Y+ G++F+VD DR+R+ EA+ EL ++ D ++ +A IL+ NK D P A
Sbjct: 498 RVWKDYFPAVDGIVFLVDVHDRERLVEAKAELDSLMTDEQVANAPILVLGNKIDKPGAAS 677
Query: 132 PHEIQEKLGLTRI 144
EI+ GL +
Sbjct: 678 EEEIRHWFGLNSL 716
>18208
Length = 458
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%)
Frame = -1
Query: 11 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 70
++E+RIL+LGLD AGKTT+L +L PT GFN+++V K K NVWD+GGQ +I
Sbjct: 308 DRELRILLLGLDNAGKTTLLKQLASEDPSHITPTQGFNIKSVQSKGFKLNVWDIGGQRRI 129
Query: 71 RPLWRHYYTGTQGLIFVVDCADRDRIDEA 99
RP W++Y+ T LI+V+D +D R++E
Sbjct: 128 RPYWKNYFENTDLLIYVIDSSDTKRMEET 42
>32860
Length = 330
Score = 87.0 bits (214), Expect(2) = 2e-19, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%)
Frame = +2
Query: 74 WRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPH 133
W YY+ ++ +I V+D DR+R+ ++EL R++ E+R A +L+FANKQD+ M
Sbjct: 8 WNTYYSNSEFIIMVIDSTDRERLSITKEELCRMLATEELRXAALLVFANKQDIKGCMSAA 187
Query: 134 EIQEKLGLTRIRDRNWYVQPSCATSGDGL 162
EI +L LT ++D W++Q C +G+G+
Sbjct: 188 EISXQLNLTSVKDHVWHIQACCGLTGEGV 274
Score = 24.6 bits (52), Expect(2) = 2e-19, Method: Compositional matrix adjust.
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 161 GLYEGLTWLTSNYK 174
GLY+GL W+TS+ +
Sbjct: 271 GLYQGLEWITSHIR 312
>19506
Length = 421
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = -3
Query: 1 MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETV 52
MG L +F K + ++ GLDAAGKTT+LY LKLG+ VTTIPT+GFNVET+
Sbjct: 173 MGSALCTLFRQKPVTVIYFGLDAAGKTTLLYNLKLGEVVTTIPTIGFNVETL 18
>15973
Length = 493
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%)
Frame = -1
Query: 77 YYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQ 136
Y G ++++VD AD+D+++ +R ELH +++ +++ +L+ NK+DLP A+ E+
Sbjct: 487 YCRGVNAIVYMVDAADQDKLEASRNELHNLLDKPQLQGVPVLVLGNKRDLPGALDEKELI 308
Query: 137 EKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175
+++ L+ I+DR + + L WL + KS
Sbjct: 307 DRMNLSAIQDREICCYSISCKEKENIDITLQWLIQHSKS 191
>18949
Length = 414
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +3
Query: 43 PTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQE 102
PT E ++ + F +D+GG + R +W+ Y+ G++F+VD D +RI EA+ E
Sbjct: 15 PTGLPTSEELSMGGMTFTTFDLGGHRQARRVWKDYFPAVDGIVFIVDVHDTERITEAKAE 194
Query: 103 LHRIINDREMRDAIILIFANKQD 125
L ++ D ++ D +L+ NK D
Sbjct: 195 LDSLLRDDQIADIPVLVLGNKMD 263
>15662
Length = 455
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +2
Query: 69 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 128
+ R +W+ Y+ G++F+VD DR+R EA+ EL ++ D ++ +A IL+ NK D P
Sbjct: 2 QARRVWKDYFPAVDGIVFLVDVHDRERFVEAKAELDSLMTDEQVANAPILVLGNKIDKPG 181
Query: 129 AMKPHEIQEKLGL 141
A EI+ GL
Sbjct: 182 AASEDEIRHWFGL 220
>06991
Length = 1860
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 43/66 (65%)
Frame = -2
Query: 107 INDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGL 166
+ + E++ +I+++FANKQD+ AM E+ LGL +++R + + + A G+GL E +
Sbjct: 1859 LEEDELKKSILMVFANKQDIEGAMTVTEVANSLGLPGLKNRKYQIFKTSAVKGEGLDEAM 1680
Query: 167 TWLTSN 172
WL+++
Sbjct: 1679 EWLSNS 1662
>11965
Length = 3256
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +1
Query: 40 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRD----- 94
T + T G ++KN+ F ++DVGGQ R W H + +IF V ++ D
Sbjct: 133 TRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHE 312
Query: 95 -----RIDEARQELHRIINDREMRDAIILIFANKQDL 126
R+ E+ + I N++ D I++F NK+DL
Sbjct: 313 DETTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDL 423
>34468
Length = 1502
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +1
Query: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVE----TVTYKNV 57
KV+ K + +I+++G GKT + Y+ LG+ T T+G + V +++
Sbjct: 463 KVVEKQTQRRIFKIIVIGDSNVGKTCLTYRFCLGKFPDKTEATIGVDFREKSIQVDSEHL 642
Query: 58 KFNVWDVGGQDKIR-PLWRHYYTGTQGLIFVVD 89
K +WD GQ++ R + +HYY ++FV D
Sbjct: 643 KLQLWDTAGQERFRKSMVQHYYRNVHAVVFVYD 741
>33374
Length = 489
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 57 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEAR---QELHRIINDREMR 113
VKF +WD GQ++ L YY G Q I V D ++D A+ +EL R +
Sbjct: 175 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQR----QASP 342
Query: 114 DAIILIFANKQDLPD 128
+ +I + NK DL +
Sbjct: 343 NIVIALAGNKADLAN 387
>33380
Length = 282
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +3
Query: 55 KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRD 114
K VK +WD GQ++ R + YY G G I + D + + + A Q+ I +
Sbjct: 54 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFN-AVQDWCTQIKTYSWDN 230
Query: 115 AIILIFANKQDLPD 128
A +++ NK DL D
Sbjct: 231 AQVVLVGNKCDLED 272
>07465
Length = 1103
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 55 KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRD 114
++V+ +WD GQ++ + + YY G Q + DRD EA + R + D E+ +
Sbjct: 339 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTVDRDSF-EALETWKRKVED-EVGE 512
Query: 115 AIILIFANKQDLPD--AMKPHEIQEKLGLTRIR 145
++I NK DL D ++P E + R+R
Sbjct: 513 IGMVIVQNKIDLIDDAVVRPEEAENLAKKLRLR 611
>08428
Length = 1109
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = -3
Query: 12 KEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVET----VTYKNVKFNVWDVGG 66
+++++ +LG GK++I+ + G + T+G + + V +F +WD G
Sbjct: 1074 RDVKVCLLGDSGVGKSSIVLRFVTGSYRPSQESTIGASFMSKSLVVDGAGYRFQIWDTAG 895
Query: 67 QDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDL 126
Q+K R L YY G + V D R R ++ + + + + ++ I NK DL
Sbjct: 894 QEKFRALAPMYYRGAAAAVIVYDVT-RPRTFKSVKSWIQELRSFGPPNIVLAIAGNKCDL 718
Query: 127 PD 128
+
Sbjct: 717 EE 712
>29196
Length = 431
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Frame = -2
Query: 55 KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRD----------RIDEARQELH 104
KN+ F ++DVGGQ R W H + +IF V ++ D R+ E+ +
Sbjct: 229 KNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFD 50
Query: 105 RIINDREMRDAIILIF 120
I N++ D I++F
Sbjct: 49 SICNNKWFTDTSIILF 2
>26083
Length = 432
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Frame = +1
Query: 9 FGN--KEMRILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVETVTY----KNVKFNV 61
FGN ++ +++ LG + GKT+++ + T T+G + + T + ++ +
Sbjct: 58 FGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQL 237
Query: 62 WDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFA 121
WD GQ++ R L Y + + V D + + + + + + +R D II++
Sbjct: 238 WDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTSKWIDDVRTERG-SDVIIMLVG 414
Query: 122 NK 123
NK
Sbjct: 415 NK 420
>14775
Length = 380
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = -2
Query: 26 KTTILYKLKLGQSV-TTIPTVG-----FNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYT 79
KT +L + + G + T+PT+ FN NV++ +WD GG + R LW ++
Sbjct: 379 KTCLLRRYQKGFFMDRTMPTIAVLCSEFNESRTDPLNVRYTLWDTGGAETYRSLWVSHFR 200
Query: 80 GTQGLIFVVD 89
G Q + V D
Sbjct: 199 GAQVALLVYD 170
>13750
Length = 503
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = -2
Query: 41 TIPTVG-----FNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVD 89
T+PT+ FN NV++ +WD GG + R LW ++ G Q + V D
Sbjct: 454 TMPTIAVLCSEFNESRTDPLNVRYTLWDTGGAETYRSLWVSHFRGAQVALLVYD 293
>33794
Length = 779
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 42 IPTVGFNVETVTY--KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRID 97
+ TV + T+ K VK +WD GQ + + R Y G QG+I V D ++ D
Sbjct: 701 LQTVAYKTTTILLEGKRVKLQIWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFD 528
>35581
Length = 364
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +2
Query: 14 MRILMLGLDAAGKTTILYKLK----LGQSVTTIPTVGFNVETVTYKN---VKFNVWDVGG 66
+ ++LG GKT +L +L L +T++ T + TVT + ++WD G
Sbjct: 47 FKCVLLGDAGVGKTCLLNRLATDKFLDSPLTSLTTASL-LTTVTLTSGVMASVDLWDTAG 223
Query: 67 QDKIRPLWRHYYTGTQGLIFVVD 89
Q++ R L YY T+ ++ V D
Sbjct: 224 QERYRSLTSSYYRDTKAVLIVYD 292
>17511
Length = 483
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Frame = -3
Query: 14 MRILMLGLDAAGKTTIL-----------YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 62
+++++LG GKT+++ YK +G T + V + V +W
Sbjct: 364 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 203
Query: 63 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRD---RIDEARQELHRIINDREMRDAIILI 119
D GQ++ + L +Y G + V D + +D R E + R+ + ++
Sbjct: 202 DTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFRSLDSWRDEFLIQASPRDPENFPFVV 23
Query: 120 FANKQDL 126
NK DL
Sbjct: 22 IGNKIDL 2
>13901
Length = 962
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Frame = -3
Query: 14 MRILMLGLDAAGKTTIL-----------YKLKLGQSVTTIPTVGFNVETVTYK---NVKF 59
+++++G GKT+ + YK+ +G V F ++ + + N+K
Sbjct: 285 FKVIIIGDPTVGKTSFVQRYVNDSFRRDYKMTIG--------VDFALKVIRWSDKCNIKL 130
Query: 60 NVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEA 99
+WD+ GQ++ + R YY I + D ++ A
Sbjct: 129 QLWDIAGQERFTSMTRVYYKDAHACIVMFDLTQKNTYQNA 10
>19006
Length = 568
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = -2
Query: 5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVET---VTYKNVKFN 60
+S G + +++++G A GKT +L Q +PTV N V K V+
Sbjct: 462 ISSTNGCHKEKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELA 283
Query: 61 VWDVGGQ---DKIRPLWRHYYTGTQGLIFVVDCAD 92
+WD GQ D++RPL + T + F +D D
Sbjct: 282 LWDTAGQEDYDRLRPL-SYPDTDVILMCFSIDSPD 181
>01972
Length = 2359
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +3
Query: 42 IPTVGFNVETVTYKN----VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADR---D 94
+ T+G V + + +KFNVWD GQ+K L YY Q + + D R
Sbjct: 390 VATLGVEVHPLLFHTSRGKLKFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYK 569
Query: 95 RIDEARQELHRIINDREMRDAIILIFANKQDLPD 128
+ ++L R+ + I++ NK D+ D
Sbjct: 570 NVPNWHRDLVRVC-----ENIPIVLCGNKVDIKD 656
>27191
Length = 443
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1
Query: 32 KLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCA 91
K G T GF ++TV +++ ++WD+ G ++ + YTG+ + V D +
Sbjct: 34 KFNQGYQPTVGVDYGFKIQTVNGVDMRVHMWDLSGSNEYLDVRNELYTGSDAIFIVFDVS 213
Query: 92 DR---DRIDEARQELHRI 106
+ + +D +E++R
Sbjct: 214 NTPSFEALDSWLREINRF 267
>05468
Length = 1558
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Frame = -3
Query: 15 RILMLGLDAAGKTTILYKLK---LGQSVTTIPTVGFNVETVTYKN---VKFNVWDVGGQD 68
+IL++G GKT+I+ + Q V F ++ + + ++ +WD+ GQ+
Sbjct: 1535 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDADTLIRLQLWDIAGQE 1356
Query: 69 KIRPLWRHYYTGTQGLIFVVD---CADRDRIDEARQELHRIINDREMRDAIILIFANKQD 125
+ + R YY G V D + D + + + +L + + ++ ANK D
Sbjct: 1355 RFGNMTRVYYKEAVGAFVVFDVTRASTFDAVTKWKNDLDSKVQLADGSPVPCVLLANKCD 1176
>34359
Length = 1042
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = +3
Query: 42 IPTVGFNVETVTYKN----VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADR---D 94
+ T+G V + + ++FNVWD GQ+K L YY I + D R
Sbjct: 138 VATLGVEVHPLQFNTSRGLLRFNVWDTAGQEKFGGLRDGYYIQGTCAIIMFDVTSRVTYK 317
Query: 95 RIDEARQELHRIINDREMRDAIILIFANKQDLPD 128
+ ++L R+ + I++ NK D+ D
Sbjct: 318 NVPNWHRDLVRVCE-----NIPIVLCGNKVDIKD 404
>10402
Length = 2765
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 52 VTYKNVKFNVWDVGGQDKIRPL--WRHYYTGTQGLIFVVDCADRD 94
+ Y ++ NVW VGG+ K+ L W +T GL V C +
Sbjct: 393 ILYCHLTCNVWSVGGRVKVSLLAHWEPLWTSAHGLHSVXMCVTLN 527
>22781
Length = 1750
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 113 RDAIILIFANKQDLPDAMKPHEIQEKLG 140
+D I+ F K+ PD +KPH Q G
Sbjct: 1550 KDDIVFTFYKKRCCPDTLKPHPKQTVFG 1467
>26536
Length = 829
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Frame = +2
Query: 55 KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRD 114
+ V + D GQ++ + HY G I V D EA + ++
Sbjct: 122 RRVSWTFLDTAGQEEYSSMREHYTRSGDGFIVVYSVTDVTSFQEAEAVFRWLTRFQDETS 301
Query: 115 AIILIFANKQDLPDAMK--PHE---IQEKLGL 141
++ NK DL K P E + ++LG+
Sbjct: 302 IHAVLCGNKTDLTSDRKVTPEEGRKMADRLGM 397
>25960
Length = 420
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 86 FVVDCADRDRIDEARQELHRIINDR 110
F VD ++D +DE LHR+++DR
Sbjct: 337 FPVDSQEKDGVDELEDVLHRLVHDR 263
>11257
Length = 1102
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Frame = -2
Query: 39 VTTIPTVGFNVETVTYKNV-------KFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCA 91
+ +P++ + V +K+V +WD GQ++ + L +Y GT +
Sbjct: 1101 TSLMPSLPHDRRGVPHKDVVVDGETFTMQIWDTAGQERYKSLRTPFYRGTDCCLLTFSVD 922
Query: 92 DRDRIDEARQELHRIINDREMRDAI---ILIFANKQDL 126
+ + +N +++D+ +I NK D+
Sbjct: 921 NLKSLQSLSDWYDEFVNYADIQDSASFPFVIIGNKADI 808
>18743
Length = 465
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +2
Query: 16 ILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV------ETVTYKNVKF 59
I M+GL A GKT I KL + I T FNV T +YKN F
Sbjct: 131 IAMVGLPARGKTYISKKLTRYLNWIGISTRAFNVGEYRRAATNSYKNHNF 280
>18169
Length = 1219
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 79 TGTQGLIFVVDCADRDRIDEA 99
T T G++FV++C DR R A
Sbjct: 920 TTTPGIVFVMECLDRTRTASA 982
>20544
Length = 1132
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2
Query: 119 IFANKQDLPDAMKPHEIQEKLGL 141
IF K D+ D M PHEI EKL L
Sbjct: 323 IFKRKVDIHD-MSPHEIXEKLYL 388
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|170172560|ref|NP_035958.3| heparan sulfate
2-O-sulfotransferase 1 [Mus musculus]
(356 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11655 331 3e-91
14674 150 6e-37
18246 117 7e-27
34010 32 0.37
>11655
Length = 826
Score = 331 bits (848), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 145/227 (63%), Positives = 180/227 (79%)
Frame = -2
Query: 83 KTASTSFTNIAYDLCAKNRYHVLHINTTKNNPVMSLQDQVRFVKNITTWNEMKPGFYHGH 142
+T STSF I YDLC N++HVLH+N TKN ++SL DQ+RF+ NI++WNE KP FYHGH
Sbjct: 723 ETGSTSFAGIVYDLCQHNKFHVLHMNVTKNAKLLSLADQMRFITNISSWNEKKPAFYHGH 544
Query: 143 ISYLDFAKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECV 202
++++DF KFGV+K PIYIN+IRDPIER+VSYYYFLR+GDD+RP +RRK GD +TFDECV
Sbjct: 543 LAFIDFNKFGVQKPPIYINMIRDPIERMVSYYYFLRYGDDFRPHAKRRKAGDHETFDECV 364
Query: 203 AEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMDQAKSNLINEYFLVGVTEELEDFIM 262
G C PE LW+QIPFFCGH ECW GS+WA++QAK N+++ Y LVGVTEEL DFI
Sbjct: 363 ERGREHCDPENLWMQIPFFCGHIEECWVPGSQWALEQAKQNVLHNYLLVGVTEELADFIA 184
Query: 263 LLEAALPRFFRGATDLYRTGKKSHLRKTTEKKLPTKQTIAKLQQSDI 309
+LEA LPRFF+GA L+ G+KSHLRKT +K P + TI KL QS+I
Sbjct: 183 VLEATLPRFFKGAMQLFNNGRKSHLRKTLKKYPPEQATIDKLHQSNI 43
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = -3
Query: 56 RH-TMDGPRQDATLDEEEDIIIIYNRVPKTAS----TSFTNIA 93
RH T G QD ++D+I+IYNRVPK A+ SFT A
Sbjct: 806 RHLTSAGAEQDFLDSSQDDVIVIYNRVPKQAARHLPVSFTTYA 678
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 286 HLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALE 322
H R T + + P+ WKMENEFY+F L+
Sbjct: 101 H*RNTLQNRPPS----TNFTNPTFWKMENEFYDFVLD 3
>14674
Length = 992
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 79/105 (75%)
Frame = +2
Query: 191 KQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMDQAKSNLINEYFL 250
K GD +TFDECV G C PE LW+QIPFFCGH ECW GS+WA++QAK N+++ Y L
Sbjct: 176 KAGDHETFDECVERGREHCDPENLWMQIPFFCGHIEECWVPGSQWALEQAKQNVLHNYLL 355
Query: 251 VGVTEELEDFIMLLEAALPRFFRGATDLYRTGKKSHLRKTTEKKL 295
VGVTEEL DFI +LEA LPRFF+GA L+ G+KSHLRKT + L
Sbjct: 356 VGVTEELADFIAVLEATLPRFFKGAMQLFNNGRKSHLRKTLKNTL 490
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Frame = +1
Query: 152 GVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTF-DECVA-----EG 205
+ PIYIN+IRDPIER+VSYYYFLR+GDD+RP +RK + C A
Sbjct: 58 ACRSPPIYINMIRDPIERMVSYYYFLRYGDDFRPQR*KRKSWRSRDV*RVCGAWS*ALRS 237
Query: 206 GSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMDQAKSNLINEYFLVGVTEELEDFIMLLE 265
G + L + G +VG R + + + L G +
Sbjct: 238 GEPVDADSFLLWP--YRGVLGARQSVGIRTSQAECAAQLS----ACGRH*GIGRLHCCPG 399
Query: 266 AALPRFFRGATDLYRTGKKSHLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQ 325
+ G + K K TE+ P + TI KL QS+IWKMENEFY+F L+ F
Sbjct: 400 SHFASLL*GGHATLQ*WPKVPPEKDTEEYPPEQATIDKLHQSNIWKMENEFYDFVLDHFH 579
Query: 326 FIRAHAVREKDGDLYILAQNFFYEKIYP 353
+I+ DG+ F YEKI P
Sbjct: 580 YIKQRTFDVIDGEYLEKGHRFQYEKIRP 663
>18246
Length = 465
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Frame = -3
Query: 231 VGSR--WAMDQAKSNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATDLYRTGKKSHLR 288
+G+R + QAK NL+NEYFLVGVTE++ +F+ LLE +LPR F+G + Y+ KSHLR
Sbjct: 463 LGTRQ*LGLKQAKRNLVNEYFLVGVTEQMFEFVDLLERSLPRIFQGFREHYQNSNKSHLR 284
Query: 289 KTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQFIRAHAVREKDGDLYILAQNFFY 348
T+ K P++ T+ +Q+S IW+MEN+ Y+FALEQF+F + ++ + L Q F Y
Sbjct: 283 VTSSKIAPSESTVQTIQRSKIWQMENDLYKFALEQFEFTKKKLMQPDNKHL----QQFMY 116
Query: 349 EKIYP 353
EK+ P
Sbjct: 115 EKVRP 101
>34010
Length = 832
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 284 KSHLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQFIRAHAVREKDGDLYILA 343
+ H R+ ++ + T+ +L +D+WK E + LE +QF R AV E +++A
Sbjct: 207 RKHYRQEEVREKLIQLTLERLDMTDLWKDRWEHLQLILEVYQFARDAAVAEA----WLVA 374
Query: 344 QNFFY 348
Q ++
Sbjct: 375 QEQYF 389
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|45592934|ref|NP_033033.1| RAS-related C3 botulinum
substrate 1 [Mus musculus]
(192 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11728 328 8e-91
19656 222 7e-59
19006 185 1e-47
31291 169 5e-43
17872 137 4e-33
10708 95 1e-20
08428 78 2e-15
17511 70 4e-13
00858 69 1e-12
01972 57 2e-12
34468 67 4e-12
26083 65 2e-11
07580 64 3e-11
14456 63 6e-11
09700 62 2e-10
07465 58 3e-09
13750 57 6e-09
32770 56 9e-09
34359 56 1e-08
33374 55 1e-08
30760 55 2e-08
11257 53 6e-08
35581 52 2e-07
13901 52 2e-07
36757 50 5e-07
27191 50 5e-07
33794 50 7e-07
26536 49 9e-07
33380 49 1e-06
36482 46 7e-06
05468 44 3e-05
01398 43 9e-05
00552 40 4e-04
09204 40 4e-04
06994 30 0.43
14775 30 0.47
14139 27 6.3
23830 27 6.7
>11728
Length = 635
Score = 328 bits (841), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 154/165 (93%), Positives = 161/165 (97%)
Frame = -1
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVD KP+NLGLWDTAG
Sbjct: 497 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPINLGLWDTAG 318
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR 120
QEDYDRLRPLSYPQTDVFLICFSL+SPASFENV+AKWYPEV HHCPNTPIILVGTKLDLR
Sbjct: 317 QEDYDRLRPLSYPQTDVFLICFSLISPASFENVKAKWYPEVSHHCPNTPIILVGTKLDLR 138
Query: 121 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGL 165
+DK+TIEKLKEKKL PITYPQGLAMAK+IGA KYLECSALTQ+GL
Sbjct: 137 EDKETIEKLKEKKLAPITYPQGLAMAKDIGAGKYLECSALTQKGL 3
>19656
Length = 428
Score = 222 bits (566), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = +3
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG+PVNLGLWDTAG
Sbjct: 105 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPVNLGLWDTAG 284
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNT 108
QEDYDRLRPLSYPQTDVFL+CFS+ SPASFEN+RAKWYPEV HHCP T
Sbjct: 285 QEDYDRLRPLSYPQTDVFLLCFSVASPASFENIRAKWYPEVNHHCPGT 428
>19006
Length = 568
Score = 185 bits (469), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 105/144 (72%)
Frame = -2
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 64
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VD K V L LWDTAGQEDY
Sbjct: 432 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 253
Query: 65 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 124
DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEVRH CPN PIILVG K DLR+D++
Sbjct: 252 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKKDLRNDEN 73
Query: 125 TIEKLKEKKLTPITYPQGLAMAKE 148
T +L + K P+ + +E
Sbjct: 72 TKRELMKMKQEPVRLDRRARHVRE 1
>31291
Length = 446
Score = 169 bits (429), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 94/122 (77%)
Frame = -1
Query: 53 LGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIIL 112
L LWDTAGQEDYDRLRPL+YP TDVF++ FSL+S AS +NV+ KWYPE+RHH P+ PI+L
Sbjct: 446 LQLWDTAGQEDYDRLRPLAYPNTDVFMLXFSLMSEASMKNVKVKWYPEIRHHDPHVPIVL 267
Query: 113 VGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEA 172
VGTKLDLR DK+ + KL+ + P++ QG +AK I A +Y ECS+ TQ LKT F+E
Sbjct: 266 VGTKLDLRQDKEAVRKLRSSRQDPVSSNQGNDLAKAIKAKRYFECSSKTQENLKTAFEET 87
Query: 173 IR 174
+R
Sbjct: 86 VR 81
>17872
Length = 700
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 86/115 (74%)
Frame = -1
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR 120
Q+D+D LRPL YP+T+VFL+CFS+VSP SF NV KW PE+R+HCP P+++VGT+ DLR
Sbjct: 700 QDDFDSLRPLCYPETNVFLLCFSVVSPTSFHNVMEKWVPELRYHCPGAPLVVVGTQSDLR 521
Query: 121 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRA 175
+D + +L + K P++ + + MA ++GA +Y+ECSALTQ+ LK VFD I A
Sbjct: 520 NDVKVLIELAKYKEKPVSEEEAVKMADQLGA-QYVECSALTQKNLKEVFDTGILA 359
>10708
Length = 2775
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Frame = -3
Query: 75 TDVFLICFS-LVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKK 133
T + +C S L + ++ KW PEVRH CPN PIILVG K DLR+D++T +L + K
Sbjct: 2653 TQMSSLCASPLTALTAWRTSLKKWTPEVRHFCPNVPIILVGNKKDLRNDENTKRELMKMK 2474
Query: 134 LTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRA 175
P+ +G AM+++I A YLECSA T+ G++ VF+ A RA
Sbjct: 2473 QEPVRLDEGRAMSEKINAYSYLECSAKTKEGVREVFETATRA 2348
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = -2
Query: 51 VNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 96
V L LWDTAGQEDYDRLRPLSYP TDV L+CFS+ SP S EN+ K
Sbjct: 2723 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK 2586
>08428
Length = 1109
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Frame = -3
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNLGLWDTA 59
M+ +K ++GD VGK+ +++ + T ++ T+ ++ S +++VDG +WDTA
Sbjct: 1077 MRDVKVCLLGDSGVGKSSIVLRFVTGSYRPSQESTIGASFMSKSLVVDGAGYRFQIWDTA 898
Query: 60 GQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHC-PNTPIILVGTKLD 118
GQE + L P+ Y +I + + P +F++V++ W E+R PN + + G K D
Sbjct: 897 GQEKFRALAPMYYRGAAAAVIVYDVTRPRTFKSVKS-WIQELRSFGPPNIVLAIAGNKCD 721
Query: 119 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR 174
L + ++ +EK ++ A I A+ + E SA+T ++ +F E R
Sbjct: 720 LEELREVVEKDAQE------------YASSISAI-FGETSAMTAVNVEEMFTELAR 592
>17511
Length = 483
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = -3
Query: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQE 62
+K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTAGQE
Sbjct: 364 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 185
Query: 63 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCP-----NTPIILVGTKL 117
+ L Y D ++ F + P +F ++ + W E N P +++G K+
Sbjct: 184 RFQSLGVAFYRGADCCVLVFDVTMPNTFRSLDS-WRDEFLIQASPRDPENFPFVVIGNKI 8
Query: 118 DL 119
DL
Sbjct: 7 DL 2
>00858
Length = 1658
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
Frame = -2
Query: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQT 75
K+ L I N F EY PT D+ V++DG+ L + DTAGQE+ +R
Sbjct: 1552 KSALTIQLXQNHFVEEYDPTXEDSXRKQVVIDGETCLLDILDTAGQEEXSAMRDQCMRTG 1373
Query: 76 DVFLICFSLVSPASFENVRAKWYPEVRH--HCPNTPIILVGTKLDLRDDKDTIEKLKEKK 133
+ FL F++ + SFE++ ++ +++ P++LVG K+DL
Sbjct: 1372 EGFLCVFAVXNLKSFEDIN-QYREQIKRVKDADEVPMVLVGNKVDL-------------P 1235
Query: 134 LTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR 174
+ + QG MA E+ + Y+E SA T++G+ F +R
Sbjct: 1234 IRNVEQRQGKHMA-ELYHIPYVETSAKTRQGVDDAFYTLVR 1115
>01972
Length = 2359
Score = 56.6 bits (135), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 51 VNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPI 110
+ +WDTAGQE + LR Y Q +I F + S +++NV W+ ++ C N PI
Sbjct: 447 LKFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNV-PNWHRDLVRVCENIPI 623
Query: 111 ILVGTKLDLRDDK 123
+L G K+D++D K
Sbjct: 624 VLCGNKVDIKDRK 662
Score = 31.2 bits (69), Expect(2) = 2e-12, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 3 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIP 34
K V+VGDG VGKT + + T F +P
Sbjct: 301 TFKLVLVGDGGVGKTTFVKRHVTGEFEKNMLP 396
>34468
Length = 1502
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Frame = +1
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQED 63
K +V+GD VGKTCL + FP + T+ D ++ VD + + L LWDTAGQE
Sbjct: 499 KIIVIGDSNVGKTCLTYRFCLGKFPDKTEATIGVDFREKSIQVDSEHLKLQLWDTAGQER 678
Query: 64 YDR-LRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH--CPNTPIILVGTKLDL 119
+ + + Y + + + +SFEN+ A W E H P ILVG K D+
Sbjct: 679 FRKSMVQHYYRNVHAVVFVYDMTKMSSFENMPA-WIEECDRHNLTKYIPRILVGNKCDV 852
>26083
Length = 432
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Frame = +1
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTA 59
++ K V +G+ +VGKT L+ + ++F Y T+ D S + ++ + + L LWDTA
Sbjct: 70 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 249
Query: 60 GQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR-HHCPNTPIILVGTK 116
GQE + L P + V ++ + + + SF +KW +VR + I+LVG K
Sbjct: 250 GQERFRSLIPSYIRDSSVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNK 420
>07580
Length = 921
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Frame = +3
Query: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYP 73
+ K L S F +Y PT+ D+Y V VDG+ L + DTAG E + +R L
Sbjct: 93 LAKVL*LYSLCKGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMK 272
Query: 74 QTDVFLICFSLVSPASFENVRAKWYPEVR-HHCPNTPIILVGTKLDLRDDKDTIEKLKEK 132
FL+ +S+ + ++F +++ +R + P++LVG K DL D++
Sbjct: 273 NGQGFLLAYSITAQSTFNDLQELREQILRVKDTDDVPMLLVGNKCDLEDER--------- 425
Query: 133 KLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR 174
+ QG +A+ + +LE SA + + +F + +R
Sbjct: 426 ---VVGKDQGQGLARSF-SCAFLETSAKARINVNEIFMDLVR 539
>14456
Length = 1867
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Frame = -1
Query: 12 GAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPL 70
G VGK+ L+ + +N F + T+ + + +V+VD + + +WDTAGQE + LR
Sbjct: 1114 GGVGKSSLMNRFVSNKFDAQSFHTIGVEFLNKDVVVDDETYTMQIWDTAGQERFKSLRTP 935
Query: 71 SYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCP-----NTPIILVGTKLDLRDDKDT 125
Y D L+ FS+ S SF N+ + W E ++ P +++G K+D+ + T
Sbjct: 934 FYRGADCCLLTFSVDSMQSFRNL-SMWRKEFLYYADIQDGVTFPFVVLGNKIDVEGRQVT 758
Query: 126 IEKLK 130
E+ +
Sbjct: 757 NEEAR 743
>09700
Length = 1855
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = -1
Query: 103 HHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQ 162
++ P TP++LVGT+ DLR+D + +L + K P++ +A ++GA Y+ECSALTQ
Sbjct: 1831 NNSPRTPLVLVGTQSDLRNDVKVLIELAKYKEKPVSEDDASKLAHQLGA-SYVECSALTQ 1655
Query: 163 RGLKTVFDEAI 173
+ LK +FD I
Sbjct: 1654 KNLKEMFDSCI 1622
>07465
Length = 1103
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +3
Query: 17 TCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQT 75
+ ++ Y F +Y T+ D + V G+ V L LWDTAGQE++D + Y
Sbjct: 240 SSMIQRYCKGIFTKDYKKTIGVDFLERQIEVGGEDVRLMLWDTAGQEEFDAITKAYYRGA 419
Query: 76 DVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDD 122
++ FS V SFE + W +V +++V K+DL DD
Sbjct: 420 QACVLAFSTVDRDSFEALET-WKRKVEDEVGEIGMVIVQNKIDLIDD 557
>13750
Length = 503
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 2/158 (1%)
Frame = -2
Query: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNL--GLWDTAGQEDYDRLRPLSYP 73
KTCLL Y F +PT+ S P+N+ LWDT G E Y L +
Sbjct: 502 KTCLLRRYQKGFFMDRTMPTIAVLCSEFNESRTDPLNVRYTLWDTGGAETYRSLWVSHFR 323
Query: 74 QTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKK 133
V L+ + + SF W + + P +I VG+K DL +++
Sbjct: 322 GAQVALLVYDVTCEWSFLTATTVWRKALMKNIPEAQVIFVGSKTDLEENR---------- 173
Query: 134 LTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDE 171
I+ +G A A + G + E S++T + + VF E
Sbjct: 172 --VISTERGQAFATQCG-YTFFETSSVTGKNVDAVFWE 68
>32770
Length = 387
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Frame = +2
Query: 99 PEVRHHCPNTPIILVGTKLDLRD-----DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVK 153
PE+R + P TP ILVGT+ DLR KD + K KKL A+++GA+
Sbjct: 2 PELRDYRPGTPFILVGTQADLRHHSQPASKDMVPAHKGKKL-----------ARKVGALG 148
Query: 154 YLECSALTQRGLKTVFDEAI 173
Y ECSAL GL VF + +
Sbjct: 149 YFECSALIGSGLDRVFRQVV 208
>34359
Length = 1042
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 51 VNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPI 110
+ +WDTAGQE + LR Y Q +I F + S +++NV W+ ++ C N PI
Sbjct: 195 LRFNVWDTAGQEKFGGLRDGYYIQGTCAIIMFDVTSRVTYKNV-PNWHRDLVRVCENIPI 371
Query: 111 ILVGTKLDLRDDK 123
+L G K+D++D K
Sbjct: 372 VLCGNKVDIKDRK 410
>33374
Length = 489
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Frame = +1
Query: 29 PGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPA 88
PGEY + F + V +D V +WDTAGQE Y L P+ Y ++ + + +
Sbjct: 115 PGEYDWSCF--LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQD 288
Query: 89 SFENVRAK-WYPEV-RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMA 146
+F RAK W E+ R PN I L G K DL + + + + + A A
Sbjct: 289 TFG--RAKTWVKELQRQASPNIVIALAGNKADLANKR------------MVEFEEAQAYA 426
Query: 147 KEIGAVKYLECSALTQRGLKTV 168
+E ++ ++E SA T + +
Sbjct: 427 EE-NSLLFMETSAKTAMNVNDI 489
>30760
Length = 596
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Frame = -1
Query: 5 KCVVVGDGAVGKT--CLLISYTTNAFPGEYIPTVFDNYSANVMV------DGK-PVNLGL 55
KC+V GD VGK+ C + + FP Y T V+V D + V L L
Sbjct: 524 KCIVTGDSGVGKSSICQVFHSDSAHFPKNYSMTT----GVEVLVKLVNIPDSRDQVELYL 357
Query: 56 WDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNT--PIILV 113
+D+AG+E + + Q V ++ + + SF +W VR PNT P +LV
Sbjct: 356 FDSAGKEIFSENVTKFWDQPSVVMVVYDVTDETSFSGC-VRWLERVRAAKPNTVIPGVLV 180
Query: 114 GTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 169
K DL + + ++ +G +A+ G ++Y ECSA + T F
Sbjct: 179 ANKTDLDERR------------RVSRKEGKDLAQSHG-LEYFECSAKEMQNTDTPF 51
>11257
Length = 1102
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Frame = -2
Query: 43 NVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR 102
+V+VDG+ + +WDTAGQE Y LR Y TD L+ FS+ + S +++ + WY E
Sbjct: 1050 DVVVDGETFTMQIWDTAGQERYKSLRTPFYRGTDCCLLTFSVDNLKSLQSL-SDWYDEFV 874
Query: 103 HHC-----PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLEC 157
++ + P +++G K D+ + + ++ + G + Y E
Sbjct: 873 NYADIQDSASFPFVIIGNKADIEERE-------------VSSEDAYNWCRTHGNLPYFET 733
Query: 158 SALTQRGLKTVFDEAIR 174
SA ++ F +R
Sbjct: 732 SAKDSLNVQQAFLAVVR 682
>35581
Length = 364
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIP--TVFDNYSANVMVDGKPVNLGLWDTAGQ 61
KCV++GD VGKTCLL T+ F + T + + G ++ LWDTAGQ
Sbjct: 47 FKCVLLGDAGVGKTCLLNRLATDKFLDSPLTSLTTASLLTTVTLTSGVMASVDLWDTAGQ 226
Query: 62 EDYDRLRPLSYPQTDVFLICF 82
E Y L Y T LI +
Sbjct: 227 ERYRSLTSSYYRDTKAVLIVY 289
>13901
Length = 962
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = -3
Query: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM--VDGKPVNLGLWDTAGQ 61
K +++GD VGKT + Y ++F +Y T+ +++ V+ D + L LWD AGQ
Sbjct: 285 FKVIIIGDPTVGKTSFVQRYVNDSFRRDYKMTIGVDFALKVIRWSDKCNIKLQLWDIAGQ 106
Query: 62 EDYDRLRPLSYPQTDVFLICFSLVSPASFEN 92
E + + + Y ++ F L +++N
Sbjct: 105 ERFTSMTRVYYKDAHACIVMFDLTQKNTYQN 13
>36757
Length = 359
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 152 VKYLECSALTQRGLKTVFDEAIRA 175
VKYLECSALTQ+GLKTVFDEAIRA
Sbjct: 2 VKYLECSALTQKGLKTVFDEAIRA 73
>27191
Length = 443
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPVNLGLWDTAGQEDYDRLRPLSYPQ 74
KTCL+ + + F Y PTV +Y + V+G + + +WD +G +Y +R Y
Sbjct: 1 KTCLIKHFCESKFNQGYQPTVGVDYGFKIQTVNGVDMRVHMWDLSGSNEYLDVRNELYTG 180
Query: 75 TDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPI-ILVGTKL 117
+D I F + + SFE + + W E+ +P+ ++VG ++
Sbjct: 181 SDAIFIVFDVSNTPSFEALDS-WLREINRFATGSPLNVIVGNRV 309
>33794
Length = 779
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -1
Query: 41 SANVMVDGKPVNLGLWDTAGQEDY-DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYP 99
+ ++++GK V L +WDT+GQ + +R S + L+ + + + SF+ + +W
Sbjct: 680 TTTILLEGKRVKLQIWDTSGQGRFCTIIRSYSRGAQGIILV-YDITNKWSFDGI-DRWLK 507
Query: 100 EVRHHCPNTPIILVGTKLDLRDDKDTIEKLKE 131
EV H P P +LVG +L L + K E
Sbjct: 506 EVEEHAPGIPKVLVGNRLHLAYKRQVAAKQAE 411
>26536
Length = 829
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Frame = +2
Query: 45 MVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRA--KWYPEVR 102
M+ + V+ DTAGQE+Y +R D F++ +S+ SF+ A +W +
Sbjct: 110 MMMERRVSWTFLDTAGQEEYSSMREHYTRSGDGFIVVYSVTDVTSFQEAEAVFRWLTRFQ 289
Query: 103 HHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQ 162
+ +L G K DL D +K+TP +G MA +G + Y E SA T
Sbjct: 290 DET-SIHAVLCGNKTDLTSD---------RKVTP---EEGRKMADRLGML-YFETSAKTG 427
Query: 163 RGLKTVFDEAIRA 175
+ V+ +R+
Sbjct: 428 DNVSQVYHGLLRS 466
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP 50
K V++G G VGK+ L I +T + F Y PT+ D+Y + V G+P
Sbjct: 491 KIVMLGSGGVGKSSLTIRFTQDTFLDVYDPTIEDSYRKMIQVSGQP 628
>33380
Length = 282
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 44 VMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR- 102
V K V L +WDTAGQE Y + Y F++ + + + SF V+ W +++
Sbjct: 39 VFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFNAVQ-DWCTQIKT 215
Query: 103 HHCPNTPIILVGTKLDLRDDK 123
+ N ++LVG K DL D++
Sbjct: 216 YSWDNAQVVLVGNKCDLEDER 278
>36482
Length = 686
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Frame = +2
Query: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVF 78
L + + T F GEY PT+ Y + +++ V L + DTAGQ Y + D F
Sbjct: 2 LTVRFLTRRFIGEYCPTLESVYKYHTVIEDDDVRLEILDTAGQGTYPWKEGYALW-ADCF 178
Query: 79 LICFSLVSPASFEN-VRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPI 137
+ +S+ S+E V+ K E + +L K DL D+ +
Sbjct: 179 VFVYSINDRQSYEELVQVKRQVESVRKSTSLTAVLAANKTDLLHDR------------QV 322
Query: 138 TYPQGLAMAKEIGAVKYLECSA 159
T +G +A+EIG Y E SA
Sbjct: 323 TQKEGEDLAEEIGCRLY-EVSA 385
>05468
Length = 1558
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = -3
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKP-VNLGLWDTAGQE 62
K +V+G+ GKT ++ Y F Y T+ +++ V+ D + L LWD AGQE
Sbjct: 1535 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDADTLIRLQLWDIAGQE 1356
Query: 63 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKW 97
+ + + Y + + F + ++F+ V KW
Sbjct: 1355 RFGNMTRVYYKEAVGAFVVFDVTRASTFDAV-TKW 1254
>01398
Length = 1421
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Frame = -2
Query: 65 DRLRPL--SYPQTDV-FLICFSLVSPASFENVRAKWYPEVRHHC-PNTPIILV-GTKLDL 119
+R R + SY + V +I + + ++FEN++ +WY E R+H P+ I LV G K D
Sbjct: 1417 ERFRSITRSYYRNSVGVIIVYDITKRSTFENLK-QWYEEARNHIEPHKAIFLVLGHKSDR 1241
Query: 120 RDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 169
D + +T +G A E+ +K+ E SA + ++ VF
Sbjct: 1240 EDAR------------QVTAREGRRFA-EMHGLKFFETSAKSGHNIEDVF 1130
>00552
Length = 455
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = -3
Query: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH 104
G+WDTAGQE Y LR Y TD L+ FS+ + S +++ + WY E ++
Sbjct: 150 GIWDTAGQERYKSLRTPFYRGTDCCLLTFSVDNLKSLQSL-SDWYDEFVNY 1
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNL 53
+K V++GDG VGK+ L+ + +N F + T+ + + +V+VDG+ +
Sbjct: 443 LKVVLLGDGGVGKSSLMNRFVSNKFDAQSFHTIGVEFLTKDVVVDGETFTM 291
>09204
Length = 1051
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Frame = -3
Query: 64 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 123
Y+ + + Y ++CF L +SF+ +R W E+R H + + GTK DL D
Sbjct: 1046 YEAMSRIYYRGAKAAILCFDLTDKSSFDRIRF-WIGELRQHEEECKLYICGTKFDLVHDD 870
Query: 124 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 169
E++ P + + LA + + E S++T ++ +F
Sbjct: 869 ------PERRAVPRSVAKALA---DDCMAEIYETSSMTGDNIEKLF 759
>06994
Length = 429
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 31 EYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
+Y PT+ D+Y V VDG+ L + DTAG
Sbjct: 139 KYDPTIEDSYRKQVEVDGQQCMLEILDTAG 228
>14775
Length = 380
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = -2
Query: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNL--GLWDTAGQEDYDRLRPLSYP 73
KTCLL Y F +PT+ S P+N+ LWDT G E Y L +
Sbjct: 379 KTCLLRRYQKGFFMDRTMPTIAVLCSEFNESRTDPLNVRYTLWDTGGAETYRSLWVSHFR 200
Query: 74 QTDVFLICF 82
V L+ +
Sbjct: 199 GAQVALLVY 173
>14139
Length = 472
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +3
Query: 69 PLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEK 128
PLS P T + L+C + + K Y H N+ I L K+DL +E
Sbjct: 228 PLSXPLTQILLVC------NIAQXIHTKLYAVSESHIHNSYIDLPTPKIDLVYSTQ*VES 389
Query: 129 LKEKKLT 135
+ K T
Sbjct: 390 IXSKTYT 410
>23830
Length = 429
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = -1
Query: 77 VFLICFSLV----SPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEK 132
V L C+++ S + ++ W+ HC ++P L TKLD R +K +K K K
Sbjct: 426 VNLTCYNIFNVQSSVXTIQSWAKLWHYXHSLHCTHSPCSLFHTKLD-RQNKHQTKKQKPK 250
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6755382|ref|NP_035434.1| RuvB-like protein 2 [Mus
musculus]
(463 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01279 200 1e-90
23413 322 2e-88
39786 70 2e-26
14389 103 2e-22
23766 33 0.33
19129 31 1.1
17843 31 1.3
07243 30 1.5
20339 29 3.8
13144 28 7.5
>01279
Length = 2183
Score = 200 bits (509), Expect(3) = 1e-90, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 154/226 (68%), Gaps = 8/226 (3%)
Frame = -2
Query: 234 KRKEVVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAKVAEWREE 286
++KEV+ V+LH++DV N+R QG L EI ++R++IN V ++ ++
Sbjct: 1417 QKKEVIQDVTLHDLDVANARPQGGQDIMSMMGQLMKPKKTEITDKLRKEINKVVNKYIDQ 1238
Query: 287 GKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGT-SYQSPHG 345
G AE++PGVLFIDEVHMLDIE F++L+RALES +AP++I ATNRG I+GT SPHG
Sbjct: 1237 GIAELVPGVLFIDEVHMLDIECFTYLHRALESTIAPIVIFATNRGKCTIKGTEDIISPHG 1058
Query: 346 IPIDLLDRLLIVSTSPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQL 405
+P+DLLDR++IV T PYS+++ QIL+IR + E++++ E++ L IG+ T+LRYA+QL
Sbjct: 1057 MPMDLLDRVMIVRTLPYSQEEMTQILQIRSQTENIQVEEESIQHLGNIGVRTTLRYAVQL 878
Query: 406 ITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFL 451
+T S++ R V ++I+ + LF D S + ++E +D +L
Sbjct: 877 LTPGSILARINGKDNVGKEEIEEIDKLFFDAKASAKILQEQEDKYL 740
Score = 145 bits (367), Expect(3) = 1e-90, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 5/201 (2%)
Frame = -3
Query: 41 QASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPF 100
Q+S G+VGQ AR AAGVV+E+I+ K+AGRAVL+AG PGTGKTAIA+ +AQ LG PF
Sbjct: 2004 QSSAGLVGQEGAREAAGVVVELIKTKKMAGRAVLLAGPPGTGKTAIALAIAQELGNKVPF 1825
Query: 101 TAIAGSEIFSLEMSKTEALTQAFRRSIGVRXXXXXXX---XXXXXXXXXXDRPATGTGSK 157
+ GSE++S E+ KTE L + FRR+IG+R + P G G
Sbjct: 1824 CPMVGSEVYSSEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPVETENPMGGYGKT 1645
Query: 158 VGKLT--LKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDY 215
V + LKT + L + ESL K+KV+ GDVI I+ +G + + GRS + A ++
Sbjct: 1644 VSHVVIGLKTAKGTKQLKLDPSIYESLQKEKVEVGDVIYIEANSGAVKRQGRSDSYATEF 1465
Query: 216 DAMGSQTKFVQCPDGELQKRK 236
D + +V P G++ KRK
Sbjct: 1464 DLEAEE--YVPLPKGDVHKRK 1408
Score = 27.3 bits (59), Expect(3) = 1e-90, Method: Compositional matrix adjust.
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -1
Query: 18 RIERIGAHSHIRGLGL 33
+ +RI +HSH++GLGL
Sbjct: 2072 KAQRIASHSHVKGLGL 2025
>23413
Length = 2343
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 150/182 (82%), Positives = 170/182 (93%), Gaps = 1/182 (0%)
Frame = -3
Query: 283 WREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQS 342
WREEGKAEI+PGVLFIDEVHMLDIE FSFLNRALE+DMAPVLIMATNRGITRIRGT Y S
Sbjct: 2341 WREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALETDMAPVLIMATNRGITRIRGTHYMS 2162
Query: 343 PHGIPIDLLDRLLIVSTSPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYA 402
PHG+PIDLLDRLLI+ST+PY EK+ KQIL+IRCEEEDVEMS+DA TVLT+IG+E SLRY+
Sbjct: 2161 PHGVPIDLLDRLLIISTTPYDEKEIKQILKIRCEEEDVEMSDDALTVLTKIGVEASLRYS 1982
Query: 403 IQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELKG-ETMD 461
IQLITAA+LVCRKRKGTEV+++DIKRVYSLFLDESRSTQ++ EYQ AF+FNE+K E M+
Sbjct: 1981 IQLITAANLVCRKRKGTEVEMEDIKRVYSLFLDESRSTQFLTEYQQAFMFNEVKDQEQME 1802
Query: 462 TS 463
TS
Sbjct: 1801 TS 1796
>39786
Length = 467
Score = 70.5 bits (171), Expect(2) = 2e-26, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = +3
Query: 9 KVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQ 49
K E+RD+TRIERIGAHSHIRGLGLDD LE R SQGMVGQ
Sbjct: 147 KKYEVRDITRIERIGAHSHIRGLGLDDVLEARAVSQGMVGQ 269
Score = 66.6 bits (161), Expect(2) = 2e-26, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
Frame = +1
Query: 52 ARRAAGVVLEMIREGKIAGRAVLIAGQPGT---GKTAIAMGMAQALGPDTPFTAIAGSEI 108
ARRAAGVV++M+REGK R L + K IA+GMAQALG +TPFT+++GSEI
Sbjct: 277 ARRAAGVVVQMVREGK--NRRTLHSTSRRAEYRKKLPIAVGMAQALGTETPFTSMSGSEI 450
Query: 109 FSLEM 113
+SLEM
Sbjct: 451 YSLEM 465
>14389
Length = 790
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
Frame = +3
Query: 81 TGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRXXXXXXX--- 137
TGKTAIA+ +AQ LG PF + GSE+FS E+ KTE L + FRRSIG+R
Sbjct: 3 TGKTAIALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEG 182
Query: 138 XXXXXXXXXXDRPATGTGSKVGKLT--LKTTEMETIYDLGTKMIESLTKDKVQAGDVITI 195
+ P G G + + LKT + L + ++L K+KV+ GDVI I
Sbjct: 183 EVTELTPVETENPMGGYGKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYI 362
Query: 196 DKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSL 244
+ +G + + GRS T A ++D + +V P G++ K+KEV+ V+L
Sbjct: 363 EANSGAVKRQGRSDTFATEFDLETEE--YVPLPKGDVHKKKEVIQDVTL 503
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%)
Frame = +3
Query: 362 YSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEV 421
YS D +QI+++R + E +++ E+A++ L+ IG ++LRYA+QL+T A +C+ +
Sbjct: 507 YSTSDMEQIIKLRAQTEGLQLEENAFSRLSEIGTSSTLRYAVQLLTPAYQMCKVNGRNLI 686
Query: 422 QVDDIKRVYSLFLDESRSTQYMKEYQD 448
DDI V+SLFLD RS++++ E +
Sbjct: 687 SKDDIDDVHSLFLDAKRSSKHLSEKNN 767
>23766
Length = 1463
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 64 REGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIF 109
R+G A + V++ G PGTGKT +A +A F + GSE+
Sbjct: 136 RDGNQAPKGVILYGPPGTGKTLLAKAVANQTS--ATFLRVVGSELI 267
>19129
Length = 1020
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 71 RAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEI 108
+ VL+ G PGTGKT +A +A + F ++GSE+
Sbjct: 592 KGVLLYGPPGTGKTLLARAVAHHT--ECTFIRVSGSEL 699
>17843
Length = 772
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 70 GRAVLIAGQPGTGKTAIAMGMAQAL 94
R +L+ G PGTGKT + +A L
Sbjct: 184 NRVILLHGPPGTGKTTLCKALAHKL 258
>07243
Length = 1112
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 62 MIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEI 108
+R G + L+ G PGTGKT +A +A L D F + S I
Sbjct: 283 FLRVGITPPKGCLLYGPPGTGKTLLARAVASQL--DANFLKVVSSAI 417
>20339
Length = 470
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 155 GSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRA 212
G + G L+LKT + DL K+IESL D I++ K+ K+ F R+
Sbjct: 281 GFQKGALSLKTATQSAVLDLLKKLIESLLVCSEFCFDFFVIEQ---KLQKIPSXFKRS 445
>13144
Length = 457
Score = 28.1 bits (61), Expect = 7.5, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +1
Query: 154 TGSKVGKLTLKTTEMETIYDLGTKMIESLTK 184
+GS++GK+ ++ ++ E + GTK++E +
Sbjct: 283 SGSQIGKINIRASQQEEFFAHGTKLLEPFEQ 375
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|70794809|ref|NP_001020566.1| Rous sarcoma oncogene
isoform 2 [Mus musculus]
(535 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
21808 327 8e-90
06405 303 2e-82
11780 204 1e-71
09007 151 6e-37
04852 150 2e-36
17300 127 2e-34
07291 130 2e-30
14116 127 2e-29
20640 125 4e-29
07940 116 3e-26
18996 100 2e-21
08294 100 2e-21
14477 94 1e-19
13592 92 4e-19
17637 92 7e-19
01718 88 9e-18
01756 86 3e-17
19301 86 5e-17
00715 84 2e-16
22005 84 2e-16
13305 77 2e-14
17253 76 3e-14
07833 75 6e-14
12721 74 1e-13
18921 72 8e-13
01060 70 2e-12
00300 70 2e-12
29581 69 4e-12
01707 66 4e-11
04591 65 8e-11
27546 64 1e-10
14126 64 1e-10
14420 62 5e-10
31885 60 2e-09
01966 59 5e-09
03240 59 7e-09
09606 59 7e-09
13066 58 8e-09
18484 58 9e-09
07836 58 1e-08
13212 57 2e-08
25550 56 3e-08
12672 56 3e-08
28157 55 6e-08
04138 54 1e-07
11228 52 6e-07
19761 51 9e-07
21079 50 3e-06
14257 50 3e-06
21210 49 5e-06
30755 49 5e-06
06462 48 1e-05
19094 47 2e-05
29243 47 2e-05
26560 46 3e-05
12324 46 3e-05
37602 46 4e-05
15910 45 5e-05
11185 45 7e-05
32264 44 2e-04
16708 41 0.001
27405 41 0.001
29687 41 0.001
16716 41 0.001
05206 40 0.002
32000 40 0.002
35671 40 0.002
18881 40 0.002
26711 40 0.002
18481 39 0.004
12786 39 0.004
28638 39 0.005
38046 39 0.007
28095 37 0.014
29636 37 0.014
07933 37 0.014
21433 36 0.030
01392 36 0.033
13641 36 0.034
36481 36 0.035
01494 36 0.036
30740 36 0.037
17286 36 0.048
17516 35 0.051
20152 34 0.14
13664 34 0.19
37260 32 0.43
27287 32 0.58
29360 32 0.73
02638 30 2.0
23319 30 2.9
32357 30 3.2
15741 29 4.9
30231 29 5.9
28929 28 7.2
>21808
Length = 1011
Score = 327 bits (838), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 155/225 (68%), Positives = 183/225 (81%), Gaps = 1/225 (0%)
Frame = +1
Query: 286 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMN 344
G WN TT VAIKTLK GTM P+ FL EAQ+MKKLRH KL+QLYAV + ++PI+I+TE M
Sbjct: 4 GLWNNTTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTQDDPIFIITELMK 183
Query: 345 KGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 404
GSLL+FL+G+ G+ L+LP L+D+ AQIA GMAY+E NY+HRDL A NILV +N K+
Sbjct: 184 NGSLLEFLQGK-GRVLKLPALIDIGAQIACGMAYLESQNYIHRDLAARNILVSDNNTVKI 360
Query: 405 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
ADFGLAR+I+++EY AR GA+FPIKWTAPEAA Y RFTIKSDVWSFGILLTE T GRVP
Sbjct: 361 ADFGLARVIKEDEYEARVGARFPIKWTAPEAANYNRFTIKSDVWSFGILLTETVTYGRVP 540
Query: 465 YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERP 509
YPGM N EVL QVE GYRMPCPP CP+ L+D+M +CWRKE ERP
Sbjct: 541 YPGMTNAEVLHQVEHGYRMPCPPGCPKPLYDIMLECWRKEEMERP 675
>06405
Length = 1965
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/350 (46%), Positives = 226/350 (64%), Gaps = 5/350 (1%)
Frame = +1
Query: 178 ESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD 237
ESE++ G +SV F+ V HY+I + D G ++T +FN+L +LV ++S HAD
Sbjct: 1 ESESSPGQRSISVR-FEG----RVYHYRITE-DDGKVFVTQEHRFNTLAELVHHHSIHAD 162
Query: 238 GLCHRLTTVCPT-SKPQTQGLAK--DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR- 293
GL L P KP G++ D WEI R + ++ +LG G +G+V+ W +
Sbjct: 163 GLVTTLLYPAPKRQKPTVFGVSPEPDRWEIERTEIAMKHRLGGGQYGDVYEAMWKRYNKI 342
Query: 294 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFL 352
VA+KTLK TM+ FL+EA +MK+++H LVQL V + EP YIVTE+M G+LLD+L
Sbjct: 343 VAVKTLKEDTMALNDFLEEAAIMKEMKHPNLVQLLGVCTREPPFYIVTEFMPHGNLLDYL 522
Query: 353 KGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 412
+ T + L+ M+ QIASGMAY+E N++HRDL A N LV ++ + KVADFGLARL
Sbjct: 523 RSSTREENGPTALMYMATQIASGMAYLETKNFIHRDLAARNCLVADSNMVKVADFGLARL 702
Query: 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 472
++D+ YTA GAKFPIKWTAPE + RF+ +SD+W+FG+LL EL T G PYPG+ E
Sbjct: 703 MKDDTYTAHIGAKFPIKWTAPEGLAFNRFSTRSDIWAFGVLLWELATYGMSPYPGVELTE 882
Query: 473 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522
V +ERGYRM PP P ++ LM +CW+ +P++RPTF+ + LE+ F
Sbjct: 883 VYHLLERGYRMERPPGTPADVYILMLKCWQWDPKDRPTFKEIHFLLENMF 1032
>11780
Length = 1713
Score = 204 bits (519), Expect(2) = 1e-71, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 183/347 (52%), Gaps = 15/347 (4%)
Frame = +3
Query: 104 FKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD--SIQAEEWYFGKITRRESE 161
F+KG+ L I T W S G+ G IP+NYV P ++ A W+ GKITR+++E
Sbjct: 111 FQKGDLLVIRRATSDRMWYKACDSNGREGMIPANYVQPRKVVTLHAMPWFHGKITRQQAE 290
Query: 162 RLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR------KLDSGGFY 215
LL E+ G FL+RES G Y L V V+HY+I +D GF
Sbjct: 291 ELLKPRED--GLFLIRESSNYPGDYTLCVCHLGK-----VEHYRILYRENQLTIDEEGF- 446
Query: 216 ITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKP-------QTQGLAKDAWEIPRES 268
F +L +LV +Y ADGLC +LT P +K Q W I +
Sbjct: 447 ------FRNLDELVKHYLADADGLCTQLTR--PVTKQGGNFGTVSLQEFKSGGWVIAXQD 602
Query: 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 328
L + +G+G FG+V+ G + G VAIK LK ++FLQEA VM LRH+ LV+L
Sbjct: 603 LEIGEAIGKGDFGDVYKGMYRGQP-VAIKQLKDKDRGEQSFLQEASVMTSLRHDNLVRLI 779
Query: 329 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 388
VV E I++VTE+M KG+L+++L+ + ++ + + M Y+E VHRD
Sbjct: 780 GVVLGETIFLVTEFMGKGNLVEYLRSRGRSVITKKDQINFATDTCAAMEYLESKRLVHRD 959
Query: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 435
L A N+LV ++ KV+DFGLA+ + ++ KFPIKWTAPEA
Sbjct: 960 LAARNVLVHDDGKAKVSDFGLAKFGD----FSQTSVKFPIKWTAPEA 1088
Score = 85.1 bits (209), Expect(2) = 1e-71, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = +1
Query: 440 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 499
+FT KSD+WSFGILL E+ + GRVPYP + +V+ VERGYRM P CP ++ +M Q
Sbjct: 1102 KFTSKSDMWSFGILLWEIYSFGRVPYPRIPLTDVVMHVERGYRMEAPEGCPPEIYSIMKQ 1281
Query: 500 CWRKEPEERPTFEYLQAFLED 520
W +P ERPTF+ + A L +
Sbjct: 1282 AWELDPNERPTFKSVLARLNN 1344
>09007
Length = 1440
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 150/283 (53%), Gaps = 15/283 (5%)
Frame = -1
Query: 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTT----RVAIKTLKPGTMSPEA--FLQEAQVMK 317
I ++ + L LGQG FG V W + +VA+K L + + FL+E +M+
Sbjct: 888 ISKDCVALSKSLGQGHFGTVRQAIWTAESGEKVQVAVKCLSKDKIHKDGQEFLKETAIMQ 709
Query: 318 KLRHEKLVQLYAVVSEE--PIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIAS 374
L HE +V++Y VV + I +VTE SLL+ +K + + +P+L D S Q+
Sbjct: 708 MLDHENIVRVYGVVMDNGADIMLVTELAPMRSLLECVKEVSARVDFSVPRLCDFSQQVCD 529
Query: 375 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGA---KFPIKW 430
GM+Y+E VHRDL A NIL+ K++D G++ L EY Q + + W
Sbjct: 528 GMSYLESKRLVHRDLAARNILLFSKSKVKISDVGVSGALGAGKEYYQSQQTIHLQNAVAW 349
Query: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RGYRMPCPPE 488
APE+ F+ SDVW+FG+LL E T G P+ G+ +++++ V+ + R+ P
Sbjct: 348 CAPESFRNLCFSSASDVWAFGVLLWEFFTHGFQPWAGLNGQQIMEAVDAPQSQRLEQPDL 169
Query: 489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 531
CP+ + +M +CW +EP+ RPTF Q FL T PQ +P
Sbjct: 168 CPKEYYAVMLKCWEQEPQRRPTFS--QLFL------TLPQIRP 64
>04852
Length = 1462
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 135/263 (51%), Gaps = 31/263 (11%)
Frame = +1
Query: 294 VAIKTLKPGTMSPEA--FLQEAQVMKKLR----HEKLVQLYAVVSEE-PIYIVTEYMNKG 346
VA+K L+ + E F+QE QVMK ++ H +V ++ P++++ E+ G
Sbjct: 28 VAVKMLRDIVTAVEEQDFVQELQVMKAVKKMGSHINIVNFLGCCTQGGPLWVIVEFAKNG 207
Query: 347 SLLDFL-----------------------KGETGKYLRLPQLVDMSAQIASGMAYVERMN 383
+L DFL K G +R L+ + QIA GM ++
Sbjct: 208 NLRDFLESCRDGINGYGKFVSPQDPGWYTKTPGGHVIRRKNLLSYAFQIARGMEFLASRK 387
Query: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
+HRDL A N+LV E V K+ADFGL+R + Y R G + P+KW APEA R+T
Sbjct: 388 CIHRDLAARNVLVTEEHVLKIADFGLSR--TGDYYKKRSGGRLPVKWMAPEALFDMRYTT 561
Query: 444 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWR 502
KSDVWSFG++L E+ + G +PY + N E+ + ++ YRMP P +L+ +M +CW
Sbjct: 562 KSDVWSFGVVLWEIFSLGGMPYASIPNEELYSKLLDDAYRMPRPELASGNLYAIMERCWL 741
Query: 503 KEPEERPTFEYLQAFLEDYFTST 525
P +RP F L ++ ++
Sbjct: 742 NRPSDRPEFSQLVGHIDRLLMTS 810
>17300
Length = 480
Score = 127 bits (320), Expect(2) = 2e-34, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 4/117 (3%)
Frame = +1
Query: 372 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFP 427
I+SGM + M YVHRDL A NILV E LVCKVADFGL+R IE + YT + G K P
Sbjct: 1 ISSGMGXLADMGYVHRDLAARNILVNEILVCKVADFGLSREIESDTTEGAYTTK-GGKIP 177
Query: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 484
++WTAPEA Y +FT SDVWSFG+++ E+ + G PY N++V+ VE+GYR+P
Sbjct: 178 VRWTAPEAIAYRKFTSASDVWSFGVVMWEVMSYGERPYWNWSNQDVIKAVEKGYRLP 348
Score = 36.6 bits (83), Expect(2) = 2e-34, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 485 CPP-ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526
CP +CPE+LH LM W+KE RP + L+ + E
Sbjct: 344 CPSMDCPEALHQLMLDAWQKERSHRPKMSMVVKTLDKLIRAPE 472
>07291
Length = 833
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Frame = +1
Query: 357 GKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIED 415
K L + QL+D QIA GMAY++ + VHR+L A N +V E+ +++D+G+ L
Sbjct: 31 SKMLTVVQLLDFGRQIADGMAYLQEVKVVHRNLAARNCIVTEDGRLQLSDYGVTGSLFPQ 210
Query: 416 NEYTARQG-AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474
+ YTA A+ +KW APE F+ KSDVW+FG++L EL T+G PYP + N +L
Sbjct: 211 SYYTADDSPARDLVKWMAPETIDNFHFSSKSDVWAFGVVLWELLTRGITPYPDVENSSLL 390
Query: 475 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521
++ G+RM P + PE ++++M CW + PE+RP F L L+ +
Sbjct: 391 PYLKEGHRMKKPKQSPEPVYEMMTACWNESPEQRPDFAELNDQLKTF 531
>14116
Length = 1017
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 119/216 (55%), Gaps = 13/216 (6%)
Frame = -1
Query: 264 IPRESLRLEVKLGQGCFGEVWMGTWN-----GTTRVAIKTL---KPGTMSPEAFLQEAQV 315
I RE L + ++G+G FG V G G VA+KTL P + ++FLQEA +
Sbjct: 645 IDREFLTMGEEIGKGNFGCVKRGFLTLPEQKGDILVAVKTLHNNNPREIELQSFLQEALI 466
Query: 316 MKKLRHEKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI 372
MK H ++ L + + + P+ +V +M G LL +++ + + + L+ I
Sbjct: 465 MKDFHHSNVLTLIGICLNLDDMPL-VVLPFMKHGDLLTYIRDDQHQP-TIKDLIMYGVDI 292
Query: 373 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG--AKFPIKW 430
A GM Y+ + +VHRDL A N ++ E+ KVADFGLAR I + EY + + AK P+KW
Sbjct: 291 ARGMDYLAGLKFVHRDLAARNCMLDEDFHVKVADFGLARDIYEKEYYSSENKKAKLPVKW 112
Query: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 466
A E+ G + K+DVWS+G++L EL T+G P
Sbjct: 111 MALESLEKGNYDSKTDVWSYGVVLWELLTRGSDALP 4
>20640
Length = 1492
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
Frame = +1
Query: 384 YVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGRFT 442
YVHRDL N LVG +LV K++DFGLAR + + Y + PI+W EA LY +F+
Sbjct: 7 YVHRDLATRNCLVGHDLVVKISDFGLARSVHSVDYYRGSEHDAIPIRWMPLEAILYNKFS 186
Query: 443 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 502
+SDVWSFG++L E+ PY G+ + EV+ V+ G + CP P +++LM QCW
Sbjct: 187 TQSDVWSFGVVLWEIFAFALQPYYGLTHEEVVRFVKEGKVLACPERTPPPMYELMKQCWH 366
Query: 503 KEPEERPTFEYLQAFLEDYFTSTE 526
+ P RP+F L LE+ + E
Sbjct: 367 RRPATRPSFHTLHKTLENMHSKYE 438
>07940
Length = 1336
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 70/277 (25%)
Frame = -3
Query: 262 WEIPRESLRLEVKLGQGCFGEVW----MGTW--NGTTRVAIKTLKPGTMSPEA--FLQEA 313
WE PRE L L +LG+G FG V MG + N + VA+K LK E ++E
Sbjct: 857 WEFPRERLVLGDRLGEGAFGLVMKGEAMGIFKDNNSVTVAVKMLKEDATDREMMDLIREM 678
Query: 314 QVMKKL-RHEKLVQLYAVVSEE-PIYIVTEYM---------------------------- 343
++MK + +H+ ++ L ++ +Y++ E+
Sbjct: 677 EMMKVIGKHKNIINLLGCCTQRGALYVIVEFAPHGNLRDFLKSHRPHGTSYSCIADYEQP 498
Query: 344 ------------------NKGSLLDFLKG------ETG-------KYLRLPQLVDMSAQI 372
+G+ L F+ G TG K L L+ + Q+
Sbjct: 497 VITSSSSSFSHPNSASSSAQGTSLGFIPGTSTVSFSTGSHRQDMLKMLTPKDLISYAYQV 318
Query: 373 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWT 431
A GM Y+ +HRDL A N+LV E V K+ADFGL R ++ +Y + + P+KW
Sbjct: 317 ARGMEYLASKQCIHRDLAARNVLVAEEYVLKIADFGLTRNLQQFDYYRKTTDGRLPVKWM 138
Query: 432 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468
APEA ++T KSDVWS+G+LL E+ T G PYP +
Sbjct: 137 APEALFDRKYTSKSDVWSYGVLLWEIFTLGGNPYPSV 27
>18996
Length = 491
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 6/136 (4%)
Frame = +2
Query: 385 VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTI 443
+HRDL A NILV + V K++DFGLA+ D Y PIKW +PEA +F+
Sbjct: 2 IHRDLAARNILVDRSCV-KISDFGLAQFANADGYYYGISQRDIPIKWYSPEAIETCKFSS 178
Query: 444 KSDVWSFGILLTELTTKGRVP--YPG--MVNREVLDQVERGYRMPCPPECPESLH-DLMC 498
SDVWS+G+ L E+ ++G +P PG + E L+++ +G R+P P C + ++ +LM
Sbjct: 179 YSDVWSYGVTLFEMFSRGEIPNLLPGHDLTQEEFLNRLRKGERLPKPELCSDFVYSELMR 358
Query: 499 QCWRKEPEERPTFEYL 514
CW + P+ RPTF +
Sbjct: 359 PCWHEMPKSRPTFHQI 406
>08294
Length = 1849
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Frame = +2
Query: 323 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFL----------KGETGKYLRLPQLVDMSAQ 371
+V V E EP +++TEY + G L FL +G L L Q + M Q
Sbjct: 890 NIVHFMGVCREAEPHFLITEYCDWGDLKQFLLATRNDNGRGRGTRVPALALSQKLGMGQQ 1069
Query: 372 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 431
+A+GM + VH DL A N+L+ + KVA L+ + +EY P++W
Sbjct: 1070 VAAGMEALSNQGLVHGDLAARNVLLTSRMQLKVARPALSGDVYASEYYPLHQRLVPLRWL 1249
Query: 432 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 491
PE L T DVW+FG+ L E+ +PY M + EVL ++ P+ P
Sbjct: 1250 PPEGVLEDSATTCGDVWAFGVFLWEVLQLADLPYRLMSDEEVLRSLQHSQAALDSPDAPP 1429
Query: 492 SLHDLMCQCWRKEPEERPTFEYLQAFL 518
+L L+ +C ++P +RP F + + L
Sbjct: 1430 ALLSLLQRCTAQQPSQRPPFSEICSVL 1510
>14477
Length = 493
Score = 94.0 bits (232), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 8/160 (5%)
Frame = -1
Query: 272 EVKLGQGCFGEVWMGTWNGTTR---VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLV 325
E+KLG G FG V G R VAIK LK + P ++EA+VMKK+ H +V
Sbjct: 475 ELKLGAGNFGSVMKGVCRLDDREIPVAIKVLKNADLDPSVQSELIKEAEVMKKMDHMHIV 296
Query: 326 QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 385
+L + E + +V E G L FL K+L L ++++ Q++ GM Y+E +V
Sbjct: 295 RLIGLCEGETMMLVLELAKLGPLNKFLP--KNKHLPLWNILELMWQVSQGMEYLEANKFV 122
Query: 386 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQG 423
HRDL A NIL+ + K++DFG+++ + E+N Y A++
Sbjct: 121 HRDLAARNILLCDEHFAKISDFGMSKTLSRENNYYMAQEA 2
>13592
Length = 980
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 135/257 (52%), Gaps = 21/257 (8%)
Frame = +2
Query: 273 VKLGQGCFGEVWMGTWNGTTRV-AIK--TLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLY 328
+K+GQG FG+V+ N T + A+K ++PG T + + +E ++++ ++H+ LV+ Y
Sbjct: 2 IKIGQGRFGKVYTAVNNNTGELMAMKEIAIQPGETRALKNVAEELKILEGIKHKNLVRYY 181
Query: 329 AV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD--MSAQIASGMAYVERMNYV 385
+ V E + I E ++G+L ++ G LP+ + +AQ+ SG+A + + V
Sbjct: 182 GIEVHREELLIFMELCSEGTLESLVELTGG----LPEALSRRFTAQLLSGVAELHKHGIV 349
Query: 386 HRDLRAANI-LVGENLVCKVADFGLARLIEDNE--------YTARQGAKFPIKWTAPEAA 436
HRD++ ANI LV + K+ DFG A I+ + Y Q P +T +
Sbjct: 350 HRDIKTANIFLVDGSNSLKLGDFGSAVKIQAHTTVPGELQGYVGTQAYMAPEVFTKTNSD 529
Query: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECPESL-- 493
+GR +D+WS G ++ E+ + G+ P+ N +++ +V G + P+ PESL
Sbjct: 530 GHGRL---ADIWSVGCVVVEMAS-GKRPWAQFDSNFQIMFKVGMGEK----PQAPESLSQ 685
Query: 494 --HDLMCQCWRKEPEER 508
HD + C + +P++R
Sbjct: 686 EGHDFIDHCLQHDPKQR 736
>17637
Length = 447
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Frame = +1
Query: 393 NILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFG 451
N ++ + L K+ D L+R + +Y ++ PIKW + EA + SDVWSFG
Sbjct: 1 NCVIDDQLRVKLTDSALSRDLFSGDYNCLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFG 180
Query: 452 ILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 511
+L+ E+ T G++PY + E+ ++ GYR+ P CP+ L +M CW P ERP+F
Sbjct: 181 VLMWEMCTLGKLPYAEIDPYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSF 360
Query: 512 EYLQAFLEDYFT 523
LQ L ++ T
Sbjct: 361 SQLQICLSEFHT 396
>01718
Length = 959
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 14/265 (5%)
Frame = +3
Query: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 332
K+G G F EV+ T T +V + T + L+E Q++ +L+H +++ V V
Sbjct: 168 KIGAGFFSEVFKVTHRITGQVMALKMNTMTSNRHNMLREVQLLNRLQHANILRFMGVCVH 347
Query: 333 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAA 392
E ++ +TEY+ G+L L+ + + L Q + ++ +A G+ Y+ ++HRDL +
Sbjct: 348 EGQLHALTEYIPSGNLEQLLE-KKDEELPWTQRIQLTLGLARGLDYLHSTRFIHRDLTSK 524
Query: 393 NILV----GENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRF-TIK 444
NIL+ +ADFGLA I D E G+ + W APE L G F +
Sbjct: 525 NILIRREDNHGYHAVIADFGLATKIPDPLDKEKLPTVGSPY---WMAPE-VLNGHFYNER 692
Query: 445 SDVWSFGILLTELTTKGRVP-----YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 499
+D++S GI++ E+T R+P P M N V D V + CP L +
Sbjct: 693 ADLFSVGIIMCEIT--ARIPADPDIMPRMNNFGV-DYVALSEMI---SYCPLDYLQLAFK 854
Query: 500 CWRKEPEERPTFEYLQAFLEDYFTS 524
C + +P++RP + +LE F +
Sbjct: 855 CCQVDPQKRPRGVEIIEWLEKIFKN 929
>01756
Length = 1858
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Frame = -3
Query: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS------PEAFLQEAQVMKKLRHEKLVQL 327
K+GQG FGEV+ T +V +K M P L+E ++++ L HE +V L
Sbjct: 1721 KIGQGTFGEVFKARCKKTKQVV--AMKKVLMDNEKEGFPITALREIKILQLLNHENVVDL 1548
Query: 328 YAVVSEEP---------IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY 378
+ S + Y+V E+ L L LP++ ++ Q+ +G+ Y
Sbjct: 1547 IEICSTKATSANRYKSMFYLVFEFCEHD--LAGLLSNMSVVFNLPEIKEVMKQLMNGLYY 1374
Query: 379 VERMNYVHRDLRAANILVGENLVCKVADFGLAR-----LIEDNEYTARQGAKFPIKWTAP 433
+ R +HRD++AANIL+ + V K+ADFGLAR L + N YT R W P
Sbjct: 1373 IHRNKILHRDMKAANILITKQGVLKLADFGLARAFSVNLRQPNRYTNR----VVTLWYRP 1206
Query: 434 EAALYG--RFTIKSDVWSFGILLTELTTKGRV 463
L G ++ D W G ++ E+ T+ +
Sbjct: 1205 PELLLGDRNYSTAIDQWGAGCIMAEMWTRNPI 1110
>19301
Length = 712
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Frame = +2
Query: 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV--M 316
+D WEIP ES+ LG G G V++G VA+K ++ ++E + +
Sbjct: 281 QDDWEIPFESITDLEWLGSGAQGAVFLGKLCAE-EVAVKKVRD--------IKETDIRNL 433
Query: 317 KKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 375
+KL H ++ V ++ P Y I+ EY G L + L+ GK + ++D S QIASG
Sbjct: 434 RKLNHPNIISFKGVCTQAPCYCIIMEYCPYGQLYEVLR--DGKEIPPALVLDWSKQIASG 607
Query: 376 MAYVERMNYVHRDLRAANILVGENLVCKVADFG 408
M Y+ +HRDL++ N+LV +N V K++DFG
Sbjct: 608 MNYLHSHKIIHRDLKSPNVLVAKNDVVKISDFG 706
>00715
Length = 1788
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 39/256 (15%)
Frame = +1
Query: 294 VAIKTLKPGTMSPEAFLQE-----AQVMKKLRHEKLVQLYAVVS----EEPIYIVTEY-- 342
VA+K + +P A Q LRH +V + S E+ ++ EY
Sbjct: 7 VAVKIYHKRSSNPRALRQSYSNELLAFRCGLRHVNVVSILGATSLHRFEDGAWLAMEYVG 186
Query: 343 -MNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLV 401
+N ++L+ + + +RL ++ Q+A G+ Y+ +N VH DL+ AN L+ +L
Sbjct: 187 PLNLQTILNDHQQDIDSSMRL----SLALQMARGLHYLHSINIVHLDLKPANCLLTRDLK 354
Query: 402 CKVADFGLARLI----------------EDNEYTARQGA-----KFPIKWTAPEAALYGR 440
++ADFG + + E T QGA + + APE +
Sbjct: 355 LRIADFGCCHQLTPTGLDMGEREGGMAGNELELTPVQGAWKNELAGTLAYRAPELLKGLQ 534
Query: 441 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES------LH 494
+++SDV+S GI L ++ T+ + PY G+ V+ QV PCPP E
Sbjct: 535 PSVRSDVYSLGITLWQMCTR-QGPYEGVPAHAVVYQVVSKDLRPCPPPSTEDDPFEVMFR 711
Query: 495 DLMCQCWRKEPEERPT 510
DL QCW + E+RPT
Sbjct: 712 DLYTQCWARRVEDRPT 759
>22005
Length = 873
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 44/193 (22%)
Frame = +1
Query: 309 FLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP---- 363
F +EA +M H +V+L V + +P+ ++ E+M+KG L DFL+ + + LP
Sbjct: 151 FEREASLMADFDHPNIVKLLGVCAIGKPMCLLFEFMSKGDLNDFLRLCSPENYNLPVSRS 330
Query: 364 --QLVDM------------------------------------SAQIASGMAYVERMNYV 385
+VD+ S QI++GMAY+ + +YV
Sbjct: 331 QNLVVDLEDGLRVEVEAEECEKDTQSEDRDCSGMLXTKDQLYISQQISAGMAYLAQKDYV 510
Query: 386 HRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGRFTIK 444
HRDL A + ++DFGLAR + + Y + PI+W EA LY +F+ +
Sbjct: 511 HRDL-ATRTVXSRTT*S*ISDFGLARSVHSVDYYRGSEQDAIPIRWMPLEAILYSKFSTQ 687
Query: 445 SDVWSFGILLTEL 457
SDVWSFG++L E+
Sbjct: 688 SDVWSFGVVLWEI 726
>13305
Length = 549
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Frame = +2
Query: 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 482
+ PI+W A E+ +T +SDVWSFG++L E+ T G PY +++ ++ GYR
Sbjct: 2 STRVPIRWMAVESLFNNTYTTQSDVWSFGVVLWEIFTLGGTPYSSTDTQQLFAFLKDGYR 181
Query: 483 MPCPPECPESLHDLMCQCWRKEPEERPTFE----YLQAFLED 520
+ P C ++ + +M QCW + + RPTF LQ L+D
Sbjct: 182 LKRPKLCDQNTYAMMLQCWNENAQRRPTFPELCGRLQRMLDD 307
>17253
Length = 483
Score = 76.3 bits (186), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Frame = -1
Query: 294 VAIKTLKPGTMSPEA--FLQEAQVMKKL-RHEKLVQLYAVVS-EEPIYIVTEYMNKGSLL 349
VA+KT E FL+E +M+KL RH +V + +P I+ E+ G LL
Sbjct: 459 VAVKTHNEAATDAEKSEFLRELSIMRKLPRHPNVVSFMGCCTMSDPALILMEFCCHGDLL 280
Query: 350 DFLKGE----------TGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGEN 399
FL+ T L + +A GMA+V VHRD+ A N+L+ E
Sbjct: 279 SFLRKRRPDRTVFLTSTANDLTARDFFSFALHVARGMAHVANNKIVHRDVAARNVLISER 100
Query: 400 LVCKVADFGLARLIEDNE--YTARQGAKFPIKW 430
VCKV+DFGL+R + D Y P++W
Sbjct: 99 NVCKVSDFGLSRRVGDQNDVYEIVSRRPLPLRW 1
>07833
Length = 1504
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Frame = -3
Query: 309 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 367
F++E ++ H ++ + A ++ P + +++++M GSL + L GE+G + Q +
Sbjct: 1478 FMEEFPRLRIFNHPNVLPVLACCNQPPNLVLISQFMPFGSLYNTLHGESGIVVDQNQSLR 1299
Query: 368 MSAQIASGMAYVERM-----NYVHRDLRAANILVGENLVCKV--ADFGLARLIEDNEYTA 420
+ IA GM ++ M N++ L + ++++ E+L ++ AD+ +
Sbjct: 1298 FAMDIARGMEFLHSMEPTIPNFL---LTSKHVMIDEDLTARINMADYCFS--------FH 1152
Query: 421 RQGAKFPIKWTAPEAALYGR----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 476
+G + W APEA L R T +D+WSF IL+ EL T+ VP+ + + EV +
Sbjct: 1151 EKGKVYSPAWMAPEA-LQRRPDDINTRAADMWSFAILMWELETR-EVPFAELSSMEVGMK 978
Query: 477 VE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
V G R+ PP + L+ C +EP +RP F+ + LE
Sbjct: 977 VALEGLRISIPPGISLHMSRLIKICMNEEPGKRPRFDMIIPILE 846
>12721
Length = 821
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 13/252 (5%)
Frame = +1
Query: 248 PTSKPQTQGLAKDAWEI----------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIK 297
P+ P+ Q L+ + + PR L +K+G+G G V + T ++A+K
Sbjct: 1 PSPMPEPQRLSHEQFRAALQMVVTPGDPRTFLDDFMKIGEGSTGIVCIATSRDGRQMAVK 180
Query: 298 TLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VVSEEPIYIVTEYMNKGSLLDFLKG 354
+ E E VM+ H +V++Y +V++E +++V E+M G+L D +
Sbjct: 181 KMDLRKQQRRELLFNEVVVMRDYHHPNIVEMYNSYLVNDE-LWVVMEFMEGGALTDIV-- 351
Query: 355 ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414
T + Q+ + +A++ +HRD+++ +IL+ + K+ DFG +
Sbjct: 352 -TNNRMDEVQIATVCRACLKALAFLHANGVIHRDIKSDSILLSHDGKVKLXDFGFCAQVT 528
Query: 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474
+ + P W APE + + D+WS GI++ E+ P N L
Sbjct: 529 QDLQKRKSLVGTPY-WMAPEVISRLPYGPEVDIWSLGIMVMEMIDAE----PPFFNEPPL 693
Query: 475 DQVERGYRMPCP 486
+ R MP P
Sbjct: 694 QAMRRIRDMPPP 729
>18921
Length = 697
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Frame = +2
Query: 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEK 323
P + + KLG+G +G V+ T +V AIK + P + ++E +M++ +
Sbjct: 23 PEDVFDILGKLGEGSYGSVFKSLHKETGQVLAIKQV-PVDTDLQEIIKEISIMQQCDSKY 199
Query: 324 LVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 382
+V+ Y + ++IV EY GS+ D ++ K L ++ + G+ Y+
Sbjct: 200 IVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRN-KTLVEREIATILYYTLKGLXYLHSR 376
Query: 383 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 442
+HRD++A NIL+ K+ADFG+A + D P W APE +
Sbjct: 377 RKIHRDIKAGNILLNNEGHAKLADFGVAGQLTDTMAKRNTVIGTPY-WMAPEVIQEIGYD 553
Query: 443 IKSDVWSFGILLTEL 457
+D+WS GI E+
Sbjct: 554 CVADIWSLGITALEM 598
>01060
Length = 1800
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 6/250 (2%)
Frame = +1
Query: 244 TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLK-- 300
T C K + L D +E L K+G+G +G V+ T R +A+K ++
Sbjct: 7 TLTCLLLKLNIKRLMMD-FETALSDLTDFQKIGEGTYGVVYKCRHRATGRKLAMKKIRLR 183
Query: 301 -PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGK 358
P + ++E ++++LRH +V L V+ E E +++V E+++ + K G
Sbjct: 184 GSEDGVPSSAIREIAMLRELRHTNIVCLEDVIMEDERLFLVFEFLSMDLKMYIDKFPEGV 363
Query: 359 YLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418
L + QI +G+ + + VHRDL+ N+L+ K+ADFG+AR
Sbjct: 364 VLDRRLVKSYVFQIVTGIXFCHQRRIVHRDLKPQNLLINHTGAIKIADFGMARTFA-LPV 540
Query: 419 TARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
A + + APE + +++ DVWS G + ++ + P +DQ+
Sbjct: 541 RAYTHEVVTLWYRAPEILMGASKYSTPVDVWSIGTIFADMLIRT----PIFKGDSEIDQL 708
Query: 478 ERGYRMPCPP 487
+ +R+ P
Sbjct: 709 FKIFRIIGTP 738
>00300
Length = 2318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 116/234 (49%), Gaps = 14/234 (5%)
Frame = -1
Query: 274 KLGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 329
K+G+G FG+V+ T + A+K +K P + E ++ + ++HE LV+ Y
Sbjct: 1637 KIGEGQFGKVYTAVNMSTGELMALKEMKFQPNDLQQLREMCDEIKIFEGIQHENLVKYYG 1458
Query: 330 V-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 388
V V ++ + + EY + G++ + K +YL + + +I + ++ + VHRD
Sbjct: 1457 VEVHKDEMLMFMEYCDTGTIEEAAKMGLPEYL----IRRYTREIVLAVNHLHENSIVHRD 1290
Query: 389 LRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK---FPIKWTAPEAALYGR 440
++ ANI + N K+ DFG + ++ + E+ G P +T + YGR
Sbjct: 1289 IKGANIFLTSNGHVKLGDFGCSVKLKSHTTMPGEFHNLVGTTAYMAPEVFTQNDQGGYGR 1110
Query: 441 FTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESL 493
+D+WS G ++ E+ T G+ P+ + N +++ +V G++ P P+SL
Sbjct: 1109 ---AADIWSLGCVVIEMAT-GKRPWHDLDNNYQIMYKVGIGHK----PAVPDSL 972
>29581
Length = 1278
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Frame = -2
Query: 299 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV---SEEPIYIVTEYMNK--GSLLDFLK 353
L+ +SP + + LRH+ +VQL VV S + +++V EY + SLLD +
Sbjct: 1244 LERDMVSPSVVCVRSTFLLNLRHQNIVQLQEVVVGKSLDSLFLVMEYCEQDLASLLDNMP 1065
Query: 354 GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 413
+ Q+ + Q+ G+ Y+ +HRDL+ +N+L+ + K+ADFGLAR
Sbjct: 1064 APFSE----SQVKCIVLQLLKGLRYLHEAFIIHRDLKVSNLLMTDKGCVKIADFGLAR-- 903
Query: 414 EDNEYTARQGAKFP----IKWTAPEAALYGRFTIKS--DVWSFGILLTELTTKGRVPYPG 467
Y Q P + + APE L+G T + D+WS G +L EL P
Sbjct: 902 ---NYGKPQKPMTPKVVTLWYRAPE-LLFGSKTHSTAIDMWSAGCILGELLGHK----PL 747
Query: 468 MVNREVLDQVE 478
M R L Q+E
Sbjct: 746 MPGRSDLQQIE 714
>01707
Length = 757
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 9/214 (4%)
Frame = +1
Query: 274 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYA 329
K+G+G +G V+ T++ VAIK P + ++E +++K+L+H LV+L
Sbjct: 85 KIGEGSYGVVFKCRNKETSQLVAIKKFVESEDDPLIKKIAMREIRMLKQLKHPNLVRLIE 264
Query: 330 VVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 388
V + +++V +Y++ L + + G L P + + Q + + + N +HRD
Sbjct: 265 VFRRKKRLHLVFDYVDHTLLNELDRYPRG--LPEPMVKRIIYQTLLAVNFCHQYNTIHRD 438
Query: 389 LRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYG--RFTIK 444
++ NIL+ K+ DFG AR++ +EYT ++ + APE L G ++
Sbjct: 439 VKPENILITRQGQVKLCDFGFARILTGPGDEYTDYVATRW---YRAPE-LLVGDTQYGPP 606
Query: 445 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
DVW+ G + EL T G+ +PG R +DQ+
Sbjct: 607 VDVWAIGCVFAELLT-GQALWPG---RSDVDQLH 696
>04591
Length = 1117
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Frame = -2
Query: 306 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP---------IYIVTEYMNKGSLLDFLKGET 356
P L+E +++++L HE +VQL + + Y++ EY + L L
Sbjct: 1089 PITALREIKILQQLEHENVVQLQEICHTQAGPYNRYKSTFYLIFEYCDY-DLAGLLNNLR 913
Query: 357 GKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIED 415
K+ L ++ +Q+ +G+ Y+ +HRD++AANIL+ + V K+ADFGL+R ++
Sbjct: 912 VKF-SLADKKNLMSQLLNGLFYIHTKQILHRDIKAANILLTRDGVLKLADFGLSRPWVKS 736
Query: 416 NEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 460
T R W P L G + + D+W G ++ E+ ++
Sbjct: 735 KRLTNR----VVTLWYRPPELLLGEREYGPEIDMWGVGCIMAEMWSR 607
>27546
Length = 426
Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Frame = -1
Query: 309 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 367
F +E +++ +L H ++Q+++++ P I+I Y KG +L +K +TG + Q
Sbjct: 339 FPRELEILTRLDHPNIIQIHSILQRGPKIFIFMRYAEKGDMLSHIK-KTGP-IDEAQTKV 166
Query: 368 MSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED 415
Q+A + Y+ + HRDL+ NIL+ + L K+ADFG AR D
Sbjct: 165 WFFQMAKALQYLHSHDIAHRDLKCENILLSKRLNVKIADFGFARYCRD 22
>14126
Length = 1265
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 107/237 (45%), Gaps = 18/237 (7%)
Frame = +3
Query: 275 LGQGCFGEVW-------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR---HEKL 324
+G G +G V+ G + R+ + + G P ++E ++K+L H +
Sbjct: 213 IGNGAYGTVYKARDLRNQGEFVAMKRIRLNNTEEGM--PMMAIREISMLKQLEQYEHPNV 386
Query: 325 VQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYL-RLP-------QLVDMSAQIASGM 376
V+L V I + + ++++ + YL + P ++ D+ Q+ +G+
Sbjct: 387 VRLLDVSHNT---ITDREIRLNLVFEYIEHDLATYLAKCPSPGLGPDRIKDLMLQLLNGV 557
Query: 377 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 436
++ VHRDL+ N+L+ ++ K+ADFGLAR+ + + A + + +PE
Sbjct: 558 DFLHSNRIVHRDLKPQNLLISKDGRLKLADFGLARIY--SFHMALTTVVVTLWYRSPEVL 731
Query: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 493
+ + D+WS G + EL T+ R + G + L ++ +P + PE +
Sbjct: 732 MQAEYGTSVDIWSCGCIFAELFTR-RALFKGSSEFDQLKKIFEVIGLPPAGDWPEGV 899
>14420
Length = 528
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
Frame = +2
Query: 307 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL 365
E + E VM++ ++ +V L + + E +++V E++ GSL D + T + Q+
Sbjct: 35 ELIINEILVMRENQNPNIVNYLDSYLVGEELWVVMEFLAGGSLTDVV---TETCMDEGQI 205
Query: 366 VDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQG 423
+ + + ++ +HRD+++ NIL+G + K+ DFG + E ++ + G
Sbjct: 206 AAVCRECLQALEFLHENQVIHRDIKSDNILLGMDGSVKLTDFGFCAQLSPEQSKRSTMVG 385
Query: 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465
+ W APE ++ D+WS G++ E+ +G PY
Sbjct: 386 TPY---WMAPEVVTRKQYGPTVDIWSLGVMCIEM-IEGEPPY 499
>31885
Length = 529
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Frame = -2
Query: 313 AQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 371
++ +L H LV L YA EE +++V + G L ++ E R + Q
Sbjct: 519 VDMLTRLDHPFLVNLWYAFQDEEDLFMVVDLFLGGDLRYHMQQEVS--FREDCVKFYLCQ 346
Query: 372 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 431
+A + Y+ VHRD++ NIL+ E C V DF +A +ED+E P +
Sbjct: 345 LALVLDYLRSQKIVHRDIKPDNILLDEQGHCHVTDFNIATQLEDDELATSTSGTRP--YM 172
Query: 432 APE---AALYGR--FTIKSDVWSFGILLTELTTKGR 462
APE A+ R + D WS G+ L EL K R
Sbjct: 171 APEVYGVAINERRGYGFPVDWWSLGVSLFELLKKRR 64
>01966
Length = 1735
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Frame = -1
Query: 306 PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ 364
P + ++E ++++LRH +V L V+ E E +++V E+++ + K G L
Sbjct: 1582 PSSAIREIAMLRELRHTNIVCLEDVIMEDERLFLVFEFLSMDLKMYIDKFPEGVVLDRRL 1403
Query: 365 LVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 411
+ QI +G+ + + VHRDL+ N+L+ K+ADFG+AR
Sbjct: 1402 VKSYVFQIVTGINFCHQRRIVHRDLKPQNLLINHTGAIKIADFGMAR 1262
>03240
Length = 1683
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Frame = -3
Query: 275 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM---SPEAFLQ-EAQVMKKLRHEKLVQLYA 329
LG G FGEV + N T + A+KTL+ + + A ++ E ++ + +E +V+LY
Sbjct: 1267 LGVGAFGEVSLCRKNDTGMLYAMKTLRKSDVLKRNQVAHVKAERDILAEADNEWVVKLYY 1088
Query: 330 VVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 388
+ +Y V +Y+ G L+ L + L P A++ + V RM ++HRD
Sbjct: 1087 SFQDHNYLYFVMDYVPGGDLMGLLI--RMEILDEPLARFYVAELVQAIESVHRMGFIHRD 914
Query: 389 LRAANILVGENLVCKVADFGLA---RLIEDNEYTARQG 423
++ NIL+ N K+ DFGL R +++Y R G
Sbjct: 913 IKPDNILIDRNGHIKLTDFGLCTGFRWTHNSKYYQRDG 800
>09606
Length = 1300
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 130/303 (42%), Gaps = 34/303 (11%)
Frame = -3
Query: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV 325
E+ L +LG+G ++ G GT VAI ++ PE ++ + H +V
Sbjct: 1115 ENFVLYEELGKGEHSIIYKGRRKGTINFVAIHCIEK-CKRPEV-TNTVRMTHDISHPNVV 942
Query: 326 QLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 384
Q + + +++V E GSL D L + +L + D + +G+ Y+ +
Sbjct: 941 QFHEWYETSNHLWLVVELCTGGSLADILAQD--HHLPETSIRDFGIHLVTGLHYIHSLGI 768
Query: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-----ARQGAKFPIK---------- 429
+ DLR + +L+ + V K ADFGL+++ +N A G ++ I+
Sbjct: 767 LFHDLRPSKVLLDTSGVLKFADFGLSKVEGENLEELFFKFAEAGDQWNIQSAEEMMKQVP 588
Query: 430 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG---------MVNREVL 474
+ APE +I SD+W+ G + E+ + G P+ G ++N+E
Sbjct: 587 TSGSPTYMAPEVFQGAEPSIMSDLWALGCVFYEMFS-GHPPFLGETYDITKDKVLNKEFP 411
Query: 475 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL--QAFLEDYFTSTEPQYQPG 532
+G R+ P PE L +L+ +K+ R ++ L AF + +S ++
Sbjct: 410 LPKVKGSRLSAKPS-PEFL-NLLESLLQKDSTRRLSWASLVKHAFWQGGLSSLVKEFTMS 237
Query: 533 ENL 535
E +
Sbjct: 236 EEI 228
>13066
Length = 551
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Frame = +3
Query: 277 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 336
G F + + ++ K P + F +E ++ KL H ++Q+++++ P
Sbjct: 21 HGTFNDGYGRNIKLACKIIDKEKAPVDFVEKFFPRELDLLTKLDHPYIIQIHSILQRXPK 200
Query: 337 -YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANIL 395
+I + +G LL +++ E G +++ Q Q+ + + Y+ + HRDL+ NIL
Sbjct: 201 NFIFMRFAERGDLLTYIQ-EVG-FVKEKQAKIWFYQMTTALNYLHSYDVAHRDLKCENIL 374
Query: 396 VGENLVCKVADFGL--ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-SDVWSFG 451
+ + K+ADFG A + E E + + APE + K +D WS G
Sbjct: 375 LSSHFNVKLADFGFACACITESGEKYMSRTYCGSAAYAAPEIVYGAPYAPKVADAWSLG 551
>18484
Length = 635
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%)
Frame = +1
Query: 369 SAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 428
+A+IA G+ ++ ++RDL+ N+++ K+ADFG+ + + T R P
Sbjct: 61 AAEIAVGLFFLHDQGIIYRDLKLDNVMLDSEGHIKIADFGMCKEGMTGDATTRTFCGTP- 237
Query: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
+ APE LY ++ D W++G+LL E+ G+ P+ G E+ +
Sbjct: 238 DYIAPEIVLYQPYSKSVDWWAYGVLLFEMLA-GQPPFDGEDEDELFSSI 381
>07836
Length = 1478
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Frame = -1
Query: 319 LRHEKLVQLYAVV-----SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIA 373
LRHE ++ A S ++++T+Y GSL D+L + L +++ ++
Sbjct: 1394 LRHENILGFIAADIKGTGSWTQLFLITDYHENGSLHDYL---LSRVLDSSEMLALAHSAI 1224
Query: 374 SGMAYVE--------RMNYVHRDLRAANILVGENLVCKVADFGLA-RLI-EDNEYTA--- 420
G+A++ + HRD+++ NILV +N C +AD GLA R I E NE
Sbjct: 1223 CGLAHLHIEIFGTRGKPAIAHRDIKSKNILVKKNGTCCIADLGLAVRYISESNEVDVAPN 1044
Query: 421 -RQGAKFPIKWTAPEAALYGRFTIK-------SDVWSFGILLTEL---------TTKGRV 463
RQG K ++ APE L +K +D+++FG+++ E+ + +V
Sbjct: 1043 PRQGTK---RYMAPE-VLEMLLNVKNFDAFKQADMYAFGLVMWEIARCCVIGGVAEEYQV 876
Query: 464 PY-------PGMVNREVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEPEERPT 510
P+ P + ++ V++ R P E + +MC+CW P R T
Sbjct: 875 PFYNCLPHDPSFEDVRLVVSVDK-VRPDIPLRWQEDPIMKVMVKVMCECWSGNPAARLT 702
>13212
Length = 1067
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Frame = -1
Query: 349 LDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 408
LD + + K + Q+ + ++ + ++ R + +HRD++A N+L+ + K+ADFG
Sbjct: 1022 LDSIMVDLEKPMTEAQICYVCHEMCMALDFLHRHHVIHRDIKAGNVLLTIDGEVKLADFG 843
Query: 409 LARLIEDNEYTARQGAKF---PIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTK 460
++ N T ++ F P W APE L + K+D+WS G+ L E +
Sbjct: 842 VSA---KNTQTQQKRDTFIGTPY-WMAPEVVLCETLKDTPYDFKADIWSLGVTLIEF-AQ 678
Query: 461 GRVPYPGMVNREVLDQVERGY--RMPCPPECPESLHDLMCQCWRKEPEERPT 510
P M VL ++ + + P + + D + +C K+P RPT
Sbjct: 677 IEPPNKEMHPMRVLIKIHKSDPPTLEKPKKWTKLFKDFIAKCLVKDPNLRPT 522
>25550
Length = 941
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +3
Query: 463 VPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522
V YPG+ EV +ERGYRM P P ++ LM +CW+ +P+ERPTF+ + LE+ F
Sbjct: 36 VXYPGVDLTEVYHLLERGYRMERPQGTPADVYILMLKCWQWDPKERPTFKEIHYLLENMF 215
Query: 523 TST 525
+
Sbjct: 216 EKS 224
>12672
Length = 773
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Frame = +3
Query: 373 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---K 429
ASG+ Y+ +VHRD++ ANIL+ KV DF E Q A I
Sbjct: 21 ASGIQYLNDNGHVHRDIKTANILLDSEYTAKVGDFATVVSAPSGEGKTVQNASVVIGTAA 200
Query: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP-----GMVNREVLDQVERGYRM- 483
+ APE A++ + K D +SFG++L E+ T G V ++ +++ VE +
Sbjct: 201 YLAPE-AIHFDVSTKLDSYSFGVVLLEVIT-GLVAQDYSREERTLSSHIMENVEEPEEIH 374
Query: 484 --------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520
P + L+D+ +C ++RP + ++ LE+
Sbjct: 375 DFVDQSAGTWPDGAVDKLYDISMRCLNLSKKQRPNVKDIRPELEE 509
>28157
Length = 400
Score = 55.1 bits (131), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Frame = +3
Query: 294 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLK 353
VA+K ++ ++F+QE + + ++ H +V LY + P+ +V EY GSL + L
Sbjct: 9 VAVKRIE-SEQEKKSFMQELKQLSRVSHPNIVCLYGACRDHPVCLVMEYAEGGSLYNVLH 185
Query: 354 GETGKYLRLPQLVDMSA-----QIASGMAYVERMN---YVHRDLRAANILV---GENLVC 402
G + PQ A Q A G+ Y+ M +HRDL+ N+L+ G L
Sbjct: 186 GSGPQ----PQYTAAHAMNWLLQCALGVEYLHGMKPKALIHRDLKPPNLLLIQCGTKL-- 347
Query: 403 KVADFGLA 410
K+ DFG A
Sbjct: 348 KICDFGTA 371
>04138
Length = 800
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +1
Query: 376 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-----LIEDNEYTARQGAKFPIKW 430
+ Y+ R +HRD++AANIL+ + V K+ADFGLAR L + N YT R W
Sbjct: 52 LYYIHRNKILHRDMKAANILITKQGVLKLADFGLARAFSVNLRQPNRYTNR----VVTLW 219
Query: 431 TAPEAALYG--RFTIKSDVWSFGILLTELTTK 460
P L G ++ D W G ++ E+ T+
Sbjct: 220 YRPPELLLGDRNYSTAIDQWGAGCIMAEMWTR 315
>11228
Length = 2155
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Frame = -2
Query: 89 VALYDYESRTETD-LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS--- 144
VA+ Y T++D LSF KG+ + N E W T ++G +P+ +V D
Sbjct: 1662 VAMLSYRKATDSDELSFCKGDVFVVQNEMEDGWLWVTCERTKESGLVPAPFVKDLDGDYE 1483
Query: 145 -IQAEEWYFGKITRRES-ERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVK 202
+++ ++ +++ E+ E+L+L E G+FLVR+SE G Y L F K +V+
Sbjct: 1482 PVESLPYFHSCLSKEEAVEKLMLAGE---GSFLVRQSENYPGDYSLF---FLCEK--DVR 1327
Query: 203 HYKIRKLDSGGFYITSRTQFNSLQQLVAYYSK 234
++I + G ++ F+SL ++ Y K
Sbjct: 1326 RFRIER--RGNQFLVGGRLFDSLDGVIKRYMK 1237
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = -1
Query: 133 YIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLS 189
+I S AP + WY G++ R +E LL + + G++LVRESE+ G++ LS
Sbjct: 2011 HINSALTAPDQKL----WYHGRLGRAGAEELLRDQDA--GSYLVRESESKLGSFVLS 1859
>19761
Length = 473
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Frame = -3
Query: 371 QIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 427
Q AS + Y+ +HRDL+ NI V E ++ D GLAR L ++ Q
Sbjct: 399 QTASALNYMHTHTPVILHRDLKPQNIYVTEKGDVRLGDLGLARKLTGPADFATSQVGT-- 226
Query: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 487
I + +PE + KSD+WS G + ++T K G++ +L QV G ++P P
Sbjct: 225 IMYLSPEILSQQPYNSKSDIWSLGCVFYDITGKKGSDEMGVMF--LLVQVMGGRKLPLPD 52
Query: 488 ECPESLHDLMCQCWRKE 504
+ D + + K+
Sbjct: 51 HYSQEFRDTISRMLTKD 1
>21079
Length = 878
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Frame = +1
Query: 321 HEKLVQLY-AVVSEEPIYIVTEYMNKGSLL------DFLKGETGKYLRLPQLVDMSAQIA 373
H KL+ L+ A + + +V E++ G L DF+ E V QI
Sbjct: 1 HPKLLMLWDAFEAPRTMVLVMEFVGAGELFERVIRDDFVLTER-------DCVHFVRQIC 159
Query: 374 SGMAYVERMNYVHRDLRAANIL-VGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWT 431
SG+ Y+ + +H DL+ N+L V +N K+ DFGLAR + + + Q ++
Sbjct: 160 SGVGYMHTQSILHLDLKPENVLCVSDNSNQIKIIDFGLARFYKPGD--SLQVLFGTPEFI 333
Query: 432 APEAALYGRFTIKSDVWSFGIL 453
APE Y +D+WS G++
Sbjct: 334 APEVVNYDEINFTTDMWSIGVI 399
>14257
Length = 919
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%)
Frame = -3
Query: 148 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 207
EEWY GKI R+E+E+LL G FLVRE+ + + LS + NV+H +
Sbjct: 896 EEWYHGKIGRKEAEKLL----ELDGDFLVREASNSAAQFVLS-----GRQNGNVRHLLL- 747
Query: 208 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 236
+D G T F+S+ L+ Y+ ++A
Sbjct: 746 -VDPDGIVRTKDFIFDSVSHLINYHRQNA 663
>21210
Length = 518
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = +3
Query: 433 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPCPPECP 490
P A+ +G + ++SDVWS GI L EL T GR PY V+ + DQ+++ R PC P
Sbjct: 42 PRASSHG-YDVRSDVWSLGITLMELAT-GRFPYRKWVS--IFDQLQQVVRGVAPCLPHDG 209
Query: 491 ESLHD---LMCQCWRKEPEERPTFEYLQA 516
HD + +C K+ ++RP + L A
Sbjct: 210 AFSHDFVNFVNKCLTKDEKQRPKYNKLLA 296
>30755
Length = 1137
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--TARQGAKFP 427
A+I S + Y+ ++RDL+ N+L+ ++ KVADFGL + ED Y T + P
Sbjct: 53 AEIISALGYLHSQGIIYRDLKLENLLLDKDGHIKVADFGLCK--EDITYGRTTKTFCGTP 226
Query: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465
++ APE + D W G+++ E+ GR+P+
Sbjct: 227 -EYLAPEVLDDNDYGRAVDWWGTGVVMYEMIC-GRLPF 334
>06462
Length = 1511
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +1
Query: 134 IPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDF 193
+PS+ +D E WY GK++RRE+E+LL G FLVRES + LS
Sbjct: 1048 MPSSETGVTDPPLHELWYHGKMSRREAEKLL----GKDGDFLVRESGHNXSQFVLS---- 1203
Query: 194 DNAKGLNVKHY----KIRKLDSGGFYITSRTQFNSLQQLVAYYSKHA 236
KH+ + +D G T F+++ LV+Y+ H
Sbjct: 1204 -------GKHHGQFIHLLLVDPDGIVRTKDYIFDNISHLVSYHCHHG 1323
>19094
Length = 898
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +1
Query: 375 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 434
G+ Y+ +HRD++A NIL+ K+ADFG+A + D P W APE
Sbjct: 94 GL*YLHSRRKIHRDIKAGNILLNNEGHAKLADFGVAGQLTDTMAKRNTVIGTP-YWMAPE 270
Query: 435 AALYGRFTIKSDVWSFGILLTEL 457
+ +D+WS GI E+
Sbjct: 271 VIQEIGYDCVADIWSLGITALEM 339
>29243
Length = 1147
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +2
Query: 124 HSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESET-- 181
HS+ G +YV S+++ WY G + R +++ L P GTFL+R +
Sbjct: 248 HSVRNG------PDYVNEPCSLESYNWYVGIMERPVAQKXLDTC--PDGTFLIRVTNNPL 403
Query: 182 TKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKH--ADGL 239
+G LS+ + NA V+H K+ + G FY+ F+++Q LV +Y + AD
Sbjct: 404 RRGELSLSIK-YANA----VRHIKVNRNPQGRFYLADGRYFDNIQSLVDHYENNELADSF 568
Query: 240 CHRLTTV 246
TT+
Sbjct: 569 PDVTTTL 589
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 89 VALYDYESRTETDLSFKKGERLQIV--NNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 144
VA+YDY + + + LS K +R+ I+ N + WW +L T + GY P YV D+
Sbjct: 641 VAVYDYAATSTSQLSMKLNDRIAILSKNGQDKGWWKGENLRTQKIGYFPLAYVDEEDA 814
>26560
Length = 398
Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = -1
Query: 369 SAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 428
+A++ G+ ++ V+RDL+ ANIL+ EN +++D GLA A G
Sbjct: 338 AAEVMLGLEHMHSRFVVYRDLKPANILLDENGHVRISDLGLACDFSKKRPHASVGTH--- 168
Query: 429 KWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY 465
+ APE + G+ + +D +SFG +L +L KG P+
Sbjct: 167 GYMAPEVLMKGQSYDSSADWFSFGCMLYKL-LKGHSPF 57
>12324
Length = 946
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +3
Query: 55 PPAAEPKLFGGFNSSDTVTSPQRAGP----LAGGVTTFVALYDYESRTETDLSFKKGERL 110
PPAA P+ T P GP A + VA+YDYE+ + +L+F + +
Sbjct: 603 PPAAPPE------DPYAATGPGFLGPDEYMPATYIEKVVAIYDYEAEKDDELTFSENSVI 764
Query: 111 QIVNNTEGDWWLAHSLSTGQTGYIPSNYVAP 141
++ + WW + G TG PSNYV P
Sbjct: 765 YVIRKNDDGWW--EGVMDGVTGLFPSNYVEP 851
>37602
Length = 804
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = -1
Query: 331 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLR 390
+ E ++I EY GS+ D TG L PQ+ + + G+ Y+ R +HRD++
Sbjct: 309 LRREKLWIAMEYCGGGSMQDIYH-VTGP-LTEPQIAFVCRETLKGLHYLHRRGKMHRDIK 136
Query: 391 AANILVGENLVCKVADF 407
ANIL+ E K+ADF
Sbjct: 135 GANILLTEEGDVKLADF 85
>15910
Length = 1361
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +2
Query: 370 AQIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF 426
+ I G+ Y+ VHRDL+ N+L + ++ K+ADFGL+R+IE E
Sbjct: 485 SDILHGVQYIHANGVVHRDLKPENLLYECMTDDSKLKLADFGLSRIIEP-EVQMSTVCGT 661
Query: 427 PIKWTAPEAALYGRFTIKSDVWSFGIL 453
P + APE ++T D+WS G++
Sbjct: 662 P-GYCAPEVLKGDKYTPSVDMWSVGVI 739
>11185
Length = 473
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 24/128 (18%)
Frame = +1
Query: 367 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-----YTAR 421
D + +G+ Y+ + + DLR + +L+ + V K ADFGL+++ +N A
Sbjct: 13 DFGIHLVTGLHYIHSLGILFHDLRPSKVLLDTSGVLKFADFGLSKVEGENLEELFFKFAE 192
Query: 422 QGAKFPIK----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-- 463
G ++ I+ + APE +I SD+W+ G + E+ + R+
Sbjct: 193 AGDQWNIQSAEEMMKQVPTSGSPTYMAPEVFQGAEPSIMSDLWALGCVFYEMFSGSRLSA 372
Query: 464 -PYPGMVN 470
P P +N
Sbjct: 373 KPSPEFLN 396
>32264
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +1
Query: 477 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520
+E GYR+ P+ P+S++ LM +CW PE+RP F+ L L+D
Sbjct: 1 IEDGYRLQQNPQTPDSVYKLMLRCWEYVPEKRPHFKELYTSLKD 132
>16708
Length = 1397
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Frame = -1
Query: 275 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLY-AVV 331
LG+G FG+V+ T + A+KT ++ L E + + ++ L Q++ A V
Sbjct: 1379 LGKGVFGKVYEARLLSTHEKAALKT----SILCHHSLDEVEALGRIEGGFYLAQMFGAWV 1212
Query: 332 SEEP---IYIVTEYMNKGSLLDFLKGETGKYLRL----PQLVD-MSAQIASGMAYVERMN 383
+ P + I+ + G L + K + + P +V ++ Q + ++ +
Sbjct: 1211 TCLPFPKMNILLHFYEMGPLCNVYAHYKNKEMPIRWSNPAMVCCIAGQXVCALEHIHELG 1032
Query: 384 YVHRDLRAANILVGENLVCKVADFGLARL 412
VH D++A N+LV + CK+ D+G+A+L
Sbjct: 1031 VVHMDVKADNVLVDAHGNCKLTDYGIAQL 945
>27405
Length = 532
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Frame = -3
Query: 328 YAVVSEEPIYIVTEYMNKGSLLDFLKGE---TGKYLRLPQLVDMSAQIASGMAYVERMNY 384
YA + E + + + MN G L L T K +R +A++ G+ ++
Sbjct: 353 YAFQTPEKLCFILDLMNGGDLHYHLSQHGVFTEKEVRF-----YAAEVMLGLEHMHSRFV 189
Query: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
V+RDL+ ANIL+ EN +++D GLA + A G + APE + G+
Sbjct: 188 VYRDLKPANILLDENGHVRISDLGLACDFSKKKPHASVGTH---GYMAPEVLMKGQAYDS 18
Query: 445 SDVW 448
S W
Sbjct: 17 SADW 6
>29687
Length = 434
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -2
Query: 90 ALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 144
AL+DY ++ E +LSF KG + V+ +G WW T + + PSNYV D+
Sbjct: 286 ALHDYNAKREDELSFCKGAIITNVSRQDGGWWRG-DYGTKKQHWFPSNYVEEIDT 125
>16716
Length = 934
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = -1
Query: 56 PAAEPKLFGGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNN 115
P EP+ + + +P ++ P GG +T +ALYDY++ + +L+F + + +
Sbjct: 553 PQHEPEESPYEMADEEPAAPAQSQP--GGGSTAIALYDYQAADDDELTFDPDDVITDIEM 380
Query: 116 TEGDWWLAHSLSTGQTGYIPSNYV 139
+ WW G+ G P+NYV
Sbjct: 379 IDDGWWRGS--CHGKNGLFPANYV 314
>05206
Length = 1075
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 85 VTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYV 139
+ T ALY +E+ E + + E +QI+ +GD W + G G++PS+YV
Sbjct: 88 IGTCRALYPFEAMNEGSVPMGENEEMQILEEDQGDGWTRVRKADGSEGFVPSSYV 252
>32000
Length = 644
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = -1
Query: 403 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELTTKG 461
K+ADFGLAR+ T + + APE L RF ++ D+WS G + E+ T+
Sbjct: 569 KIADFGLARVFGLPVRTYTHEV-ITLWYRAPEILLGCRFYSVPVDIWSLGCIFVEMMTR- 396
Query: 462 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW---RKEPEERPTF 511
R +PG + E+ DQ+ R +R P+ + W K P+ +PTF
Sbjct: 395 RALFPG--DSEI-DQLYRIFRTLGTPD---------EKVWPGVSKLPDYKPTF 273
>35671
Length = 567
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -3
Query: 478 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524
++G R+ P C + + +M QCW + EERPTF+ L +E+ + S
Sbjct: 565 QKGNRLAKPISCTDEAYKVMLQCWTESREERPTFKKLVPVMENLYRS 425
>18881
Length = 762
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = -3
Query: 170 PRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV 229
P GTFL+R + T+ C + NA V+H K+ + G FY+ F+S+QQLV
Sbjct: 748 PDGTFLIRVTNTSARESCPQY*-YANA----VRHIKVNRNPQGRFYLADGHYFDSVQQLV 584
Query: 230 AYYSKH 235
+Y K+
Sbjct: 583 EHYEKN 566
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 100 TDLSFKKGERLQIV--NNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 144
T ++ K +R+ I+ N + WW +L T + GY P YV DS
Sbjct: 442 TQVTLKLNDRISILSKNGQDKGWWKGENLRTKKVGYFPLAYVDEEDS 302
>26711
Length = 405
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Frame = -2
Query: 371 QIASGMAYVERMNYVHRDLRAANILV-GENL-VCKVADFGLAR-LIEDNEYTARQGAKFP 427
Q+ + +V VH DL+ +N+L+ G+ L ++ DFGLAR L E G
Sbjct: 392 QVLDILQHVHAQGVVHMDLKPSNLLLSGDKLDSVQLIDFGLARKLYPPQETFLNHGTP-- 219
Query: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
+T+PEA + SDVW G+L L + G+ P+ E L + +
Sbjct: 218 -GFTSPEALDVKPISTASDVWGVGVLAYILLS-GQSPFQADSATESLKKTQ 72
>18481
Length = 437
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Frame = -1
Query: 312 EAQVMKKL-RHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 369
EA+V +++ RH L +Y +E+ +V E + G L+ L + L ++ +S
Sbjct: 350 EAKVYEQIGRHPGLPTMYHYGTEKHFNALVMELL--GPSLEELFVICKRRFTLKTILMVS 177
Query: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIEDNEYT 419
Q+ S + ++ + ++HRDL+ N L+G C + DFGL++ +D + T
Sbjct: 176 DQLLSRLEFIHQKCFIHRDLKPDNFLMGLGRHCHRLYIIDFGLSKRYKDTQGT 18
>12786
Length = 460
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Frame = -3
Query: 385 VHRDLRAAN-ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYG--- 439
+H DL+ AN +LV NL K+ DFG+A ++ ++ + + ++ + +PEA +
Sbjct: 344 IHSDLKPANFMLVAGNL--KLIDFGIANTLQQDKTSVLKDSRVGTPSYMSPEAIMAACDD 171
Query: 440 -----------------RFTIKSDVWSFGILLTELTTKGRVPYPGMVN 470
+ ++SDVWS G +L + GR P+ + N
Sbjct: 170 SADDSMEEDGHRTKPKYKVGVRSDVWSLGCILYNMVY-GRTPFQHIKN 30
>28638
Length = 1458
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = -1
Query: 371 QIASGMAYVE--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKF 426
Q+ + + ++ MN +H DL+ NIL+ + K+ DFG + + Y Q ++F
Sbjct: 813 QLCTALLFLATPEMNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF 637
Query: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
+ +PE L + + D+WS G +L E+ T
Sbjct: 636 ---YRSPEVLLGVPYDLAIDMWSLGCILVEMHT 547
>38046
Length = 446
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -1
Query: 372 IASGMAYVERMNYVHRDLRAANILVGEN 399
IA MAY+E+ N++HR+L NILVG N
Sbjct: 98 IADAMAYMEKENFIHRNLGDRNILVGPN 15
>28095
Length = 597
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 90 ALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYV 139
A+YDY++ ++SF G+ + + W TGQ G +PSNYV
Sbjct: 270 AMYDYQAADSDEVSFNDGDTIIECQPVDAGWMTGRVERTGQYGMLPSNYV 419
>29636
Length = 354
Score = 37.4 bits (85), Expect = 0.014, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +1
Query: 70 DTVTSPQRAGPLAGGVTTFVALYDYESRT-------ETDLSFKKGERLQIVNNTEGDWWL 122
DT P G + AL++Y+ E +SF KG+ L + ++ +WW
Sbjct: 43 DTTAKP-------GDIMHLRALFNYDPEDDPYIPCRELGISFLKGDILHAIQLSDSNWWQ 201
Query: 123 AHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAEN 169
AH G+ ++ + + PS + Q + RES R LNAEN
Sbjct: 202 AH--REGEDAHMLAGLI-PSKAFQEQ---------RESVRQQLNAEN 306
>07933
Length = 728
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQ 515
P CP L+++M QCW EP RPTF L+
Sbjct: 3 PNYCPNLLYNIMMQCWSAEPSARPTFHKLE 92
>21433
Length = 590
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Q++S + Y +HRD++ N+L+G K+ADFG + + T G + +
Sbjct: 191 QLSSALEYCHYRKVIHRDIKPENLLLGLKGDLKIADFGWSVHAPSSRRTTMCGT---LDY 361
Query: 431 TAPEAALYGRFTIKSDVWSFGILLTEL 457
PE D+WS G+L E
Sbjct: 362 LPPEMVEGKTHDENVDLWSLGVLCYEF 442
>01392
Length = 1806
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Frame = -1
Query: 371 QIASGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKF 426
IA + ++ HRDL+ NIL + + + K+ DF LA I D + T
Sbjct: 1767 HIARALDFLHSKGIAHRDLKPENILCEHLDDVVPVKICDFDLASGISCDGDGTKTPELLT 1588
Query: 427 PI---KWTAPEA--ALYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 473
P+ ++ APE A G + + D+WS GI+L + G P+ G +
Sbjct: 1587 PVGSAEYMAPEVVDAWVGDSFSYDKRCDLWSLGIILY-IMLCGYPPFYGQCGEDC 1426
>13641
Length = 2081
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 99 ETDLSFKKGERLQIVNNTEGDWWLA--HSLSTGQTGYIPSNY 138
E LSF++G+ L IVN + WW A H + + G IPS +
Sbjct: 212 EAGLSFQQGDILHIVNQEDAIWWQAYKHGDAKKRAGLIPSRH 337
>36481
Length = 806
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Frame = +2
Query: 257 LAKDAWEIPR-----ESLRLEVKLGQGCFGEVWM--GTWNGTTRVAIKTLKPGTMSPEAF 309
+ KD W R ++L G+G FG+V G +A+K +K EA
Sbjct: 317 MRKDIWCTMRGTSSTNDMKLCPHWGEGTFGKVVQCKDLLKGDD-IALKIIKNVDKYREAA 493
Query: 310 LQEAQVMKKLR----HEK--LVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP 363
E V++KLR H K VQ+ ++ +M S+ DFLK + +
Sbjct: 494 KLEINVLEKLREKDPHAKHMCVQMLDWFDYHGHVCISFHMLGLSVFDFLKDNSYGAYPIE 673
Query: 364 QLVDMSAQIASGMAYVERMNYVHRDLRAANIL 395
Q+ +S Q+ + ++ H DL+ NIL
Sbjct: 674 QVRHISYQLCYAVNFLHENQLTHTDLKPENIL 769
>01494
Length = 2122
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 90 ALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYV 139
AL+DY + + +LSF KG + V+ +G WW + Q + PSN+V
Sbjct: 318 ALHDYNANRDDELSFCKGAIITNVSRQDGGWWRGDYGAKKQH-WFPSNFV 464
>30740
Length = 488
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 92 YDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIP 135
YD+ R DL F KG+ L++++ E +WW A G+ G P
Sbjct: 203 YDFSGRDPEDLPFSKGDILELISKDEEEWWTARD-KHGRVGQDP 331
>17286
Length = 489
Score = 35.8 bits (81), Expect = 0.048, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 90 ALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYV 139
A+YD+ ++ +L F++G+ + +++ + +W+ G+ GY P NYV
Sbjct: 36 AIYDFLPESDGELGFQEGDMITLISQVDENWF--EGSVHGKVGYFPINYV 179
>17516
Length = 453
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Frame = -3
Query: 432 APEAALY-GRFTIKSDVWSFGILLTEL--TTKGRVPYPGMVNREVLDQVERGYR----MP 484
APE L G++ +K+DV+S I+L EL + + D V+ G R M
Sbjct: 415 APEVLLQKGQYDMKADVYSLAIILWELWYGQDAADHISSHLFGRLEDAVQAGLRPSVTMT 236
Query: 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526
C P P+ L+ W +RPT F ED+ T+
Sbjct: 235 CKP--PDDWLKLLQSGWEFHASKRPTSRDAAEFFEDFLERTK 116
>20152
Length = 445
Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +1
Query: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 505
DVWS G++L L G P+ + E L + R PP DL+ + ++EP
Sbjct: 43 DVWSLGVILYMLVV-GEAPFQEANDSETLTMI-MDCRYQIPPHISHKCQDLIEKMLQREP 216
Query: 506 EERPTFEYLQA 516
+R + ++ A
Sbjct: 217 VDRASLPHILA 249
>13664
Length = 507
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 89 VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGY 133
VALYDY+++ +L+ G+ + +++ WW+ L GQ G+
Sbjct: 374 VALYDYKAQRSDELTILSGDVIMLLHKDSESWWMGELLD-GQQGF 505
>37260
Length = 401
Score = 32.3 bits (72), Expect = 0.43, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -1
Query: 150 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 205
WY+G ++ E+E L++ + G+FLVR+S LS + ++H+K
Sbjct: 182 WYWGPLSYEEAESKLMDKRD--GSFLVRDSSNENYILSLSFKSMGHVHHTRIEHHK 21
>27287
Length = 514
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525
PP + +M CW+++P +RP+F L L+ TS+
Sbjct: 504 PPYASSEMFGIMHSCWQEDPNDRPSFSRLVQELDKMLTSS 385
>29360
Length = 363
Score = 32.0 bits (71), Expect = 0.73, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Frame = +3
Query: 290 GTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHE-----KLVQLYAVVSEEPIYIVTEYM 343
GT+ VAIK LK E ++++L E V+ + + + M
Sbjct: 21 GTSEIVAIKILKNHPSYARQGQIEVSILQRLSQESADDYNFVRAFECFQHKNHTCLVFEM 200
Query: 344 NKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV 396
+ +L DFLK + L L + ++ Q+ + + ++++ +H DL+ NI++
Sbjct: 201 LEQNLYDFLKQNKFQPLPLKYIRPITQQVLTALRKLKQLGLIHADLKPENIML 359
>02638
Length = 1490
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Frame = +1
Query: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-- 485
I + APE + DVWS G ++ E+ T R P+ + ++ + + +++
Sbjct: 28 IAFMAPEVLRGESYGRACDVWSVGCVMIEMCT-CRPPW---NSHDISNHLALIFKIASSV 195
Query: 486 -PPECPESL----HDLMCQCWRKEPEERPTFEYL 514
PP PE++ DLM +C ++ + RP+ + L
Sbjct: 196 DPPPIPENMSPPVRDLMLRCLEQDSDFRPSAKDL 297
>23319
Length = 2235
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 433 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 483
P+ ++ D+WS G + EL GR +PG + DQ++R +++
Sbjct: 3 PDVYXAKMYSTSIDMWSAGCIFAELANAGRPLFPG---NDDDDQLKRIFKL 146
>32357
Length = 625
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 270 RLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ 311
RL K+G G FGE+++G N + VA+K P+ + +
Sbjct: 429 RLMKKIGSGSFGEIYLGVHNTSGEEVAVKLELKNAKHPQLYYE 301
>15741
Length = 402
Score = 28.9 bits (63), Expect = 4.9, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 371 QIASGMAYVERMNYVHRDLRAANIL 395
+A GMA+V VHRD+ A N+L
Sbjct: 76 HVARGMAHVANNKIVHRDVAARNVL 2
>30231
Length = 340
Score = 28.9 bits (63), Expect = 5.9, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Frame = -2
Query: 172 GTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSR-----TQFNSLQ 226
G+FLVR+SE+ AY L + L V Y+I G + S F L
Sbjct: 249 GSFLVRDSESVSNAYVLCL-----LFQLRVHQYRILPDKDGRLSVQSEGDMQPLSFIDLP 85
Query: 227 QLVAYYSKHADGLCHRLTTVCPTSKP 252
L+ Y D + +CP +P
Sbjct: 84 SLIQVYISKGD----KNGLICPLRRP 19
>28929
Length = 424
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -3
Query: 88 FVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD 143
F AL D S T T F K R + + T WW+A + G +PS PS+
Sbjct: 218 FEALCDRRSETVTLFLFFK--RSWVGSETAPRWWIAKTWRNFDAGCVPSPNPKPSN 57
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= gi|6679299|ref|NP_032857.1| prohibitin [Mus musculus]
(272 letters)
Database: contigs50plus
39,407 sequences; 28,359,218 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
20881 325 1e-89
07529 234 4e-62
21462 28 4.5
>20881
Length = 2017
Score = 325 bits (834), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 155/215 (72%), Positives = 178/215 (82%)
Frame = +1
Query: 58 IPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDER 117
IPWVQKPIIFDCRSRPRNVPV+TGSKDLQNVNITLRILFRP LP+I+T++G DYDER
Sbjct: 208 IPWVQKPIIFDCRSRPRNVPVVTGSKDLQNVNITLRILFRPQVPSLPKIFTNLGTDYDER 387
Query: 118 VLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGK 177
VLPSIT E+LK++VA+FDA ELITQRELVS++VS++LT+RA FGL+LDD+SLTHLTFG+
Sbjct: 388 VLPSITNEVLKAIVAQFDASELITQRELVSQKVSEELTDRALQFGLLLDDISLTHLTFGR 567
Query: 178 EFTXXXXXXXXXXXXXXXXXFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIE 237
EFT FVVEKAEQQKKAA+ISAEGDS AAE +A + AG+GL+E
Sbjct: 568 EFTEAVESKQVAQQEAERARFVVEKAEQQKKAAVISAEGDSLAAEQLAKAFGEAGEGLVE 747
Query: 238 LRKLEAAEDIAYQLSRSRNITYLPAGQSVLLQLPQ 272
LRKLEAAEDIAYQLSRSRN+ YLP GQ LL LPQ
Sbjct: 748 LRKLEAAEDIAYQLSRSRNVVYLPQGQQTLLSLPQ 852
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 54/88 (61%)
Frame = +2
Query: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPW 60
MA ++F S+ K G+ +AV GGVV SALYNVD GHRAVIFDRFRGVQD V GEGTH
Sbjct: 35 MAQRLFSSLSKLGVGIAVVGGVVQSALYNVDGGHRAVIFDRFRGVQDAVSGEGTH----- 199
Query: 61 VQKPIIFDCRSRPRNVPVITGSKDLQNV 88
VP GSK+L ++
Sbjct: 200 ---------------VPRFPGSKNLSSL 238
>07529
Length = 1399
Score = 234 bits (596), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 157/220 (71%)
Frame = +2
Query: 44 GVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQL 103
GVQ+ V EG HF +PW Q PII+D RSRPR + TGSKDLQ VNI+LR+L RP+ASQL
Sbjct: 5 GVQEDVYVEGLHFRVPWFQYPIIYDIRSRPRKITSPTGSKDLQMVNISLRVLSRPIASQL 184
Query: 104 PRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGL 163
P +Y S+G DYDERVLPSI E+LKSVVA+F+A +LITQR+ VS + +LTERA F +
Sbjct: 185 PHVYRSLGTDYDERVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELTERAKDFNI 364
Query: 164 ILDDVSLTHLTFGKEFTXXXXXXXXXXXXXXXXXFVVEKAEQQKKAAIISAEGDSKAAEL 223
ILDDVS+T L+FG+E+T F+VEKA+Q+K+ ++ A+G+++AA+L
Sbjct: 365 ILDDVSITELSFGREYTAAVESKQVAQQEAQRAQFLVEKAKQEKQQKMVQADGEAQAAKL 544
Query: 224 IANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAG 263
I ++ A G ++LRK+ AA++I+ +++S+N YL A
Sbjct: 545 IGQAV-QANPGFLKLRKIRAAQNISRTVAQSQNRVYLNAS 661
>21462
Length = 1155
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = -1
Query: 87 NVNITLR-ILFRPVASQLPRIY-TSIGED---YDERVLPSITTEILKSVVARFDAGELIT 141
NV ++L +L P + QL Y +G+ ER++ S+T + V+ + DA + T
Sbjct: 261 NVYMSLSPVLIWPQSGQLTT*Y*NRVGDR**IQKERIMRSVTARLAGVVLRQHDASHIAT 82
Query: 142 QRELVSRQVSDDLT-ERAAT-FGLI 164
LVS++++ L E T FG +
Sbjct: 81 MDCLVSKEIAQCLQIENCCTGFGYL 7
BLAST Search Results
TBLASTN 2.2.18 [Mar-02-2008]